# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mtk00857.fasta.nr -Q ../query/mFLJ00389.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00389, 412 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919952 sequences Expectation_n fit: rho(ln(x))= 4.9656+/-0.000188; mu= 11.8940+/- 0.010 mean_var=73.9235+/-14.398, 0's: 30 Z-trim: 36 B-trim: 3108 in 1/64 Lambda= 0.149171 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148676689|gb|EDL08636.1| Tnf receptor-associate ( 412) 2777 606.8 2.8e-171 gi|26325122|dbj|BAC26315.1| unnamed protein produc ( 409) 2754 601.9 8.7e-170 gi|731002|sp|P39428.1|TRAF1_MOUSE RecName: Full=TN ( 409) 2751 601.2 1.4e-169 gi|74203048|dbj|BAE26224.1| unnamed protein produc ( 409) 2748 600.6 2.1e-169 gi|66910221|gb|AAH96595.1| Tnf receptor-associated ( 409) 2728 596.3 4.2e-168 gi|109469766|ref|XP_001080233.1| PREDICTED: simila ( 480) 2610 571.0 2.1e-160 gi|6707734|sp|Q13077.1|TRAF1_HUMAN RecName: Full=T ( 416) 2348 514.5 1.8e-143 gi|109110420|ref|XP_001095862.1| PREDICTED: simila ( 416) 2348 514.5 1.8e-143 gi|114626393|ref|XP_001158250.1| PREDICTED: TNF re ( 416) 2339 512.6 6.7e-143 gi|149738082|ref|XP_001504769.1| PREDICTED: TNF re ( 415) 2324 509.4 6.3e-142 gi|55729058|emb|CAH91266.1| hypothetical protein [ ( 416) 2324 509.4 6.3e-142 gi|165971266|gb|AAI58697.1| Unknown (protein for I ( 364) 2315 507.4 2.2e-141 gi|119901001|ref|XP_613776.3| PREDICTED: similar t ( 415) 2287 501.4 1.6e-139 gi|73972033|ref|XP_855528.1| PREDICTED: similar to ( 413) 2017 443.3 4.9e-122 gi|21748624|dbj|BAC03449.1| FLJ00389 protein [Homo ( 351) 1797 395.9 7.7e-108 gi|149038936|gb|EDL93156.1| rCG45902 [Rattus norve ( 278) 1794 395.1 1e-107 gi|194381570|dbj|BAG58739.1| unnamed protein produ ( 294) 1756 387.0 3.1e-105 gi|126294101|ref|XP_001369540.1| PREDICTED: simila ( 579) 1576 348.5 2.3e-93 gi|26354396|dbj|BAC40826.1| unnamed protein produc ( 255) 1550 342.6 6.1e-92 gi|224073862|ref|XP_002187788.1| PREDICTED: simila ( 553) 1317 292.8 1.3e-76 gi|194475176|gb|ACF74539.1| TNF receptor-associate ( 210) 1259 279.9 3.8e-73 gi|118099434|ref|XP_415406.2| PREDICTED: similar t ( 558) 1165 260.0 9.5e-67 gi|169158233|emb|CAQ14105.1| novel protein similar ( 551) 1077 241.1 4.8e-61 gi|93117589|gb|ABE99697.1| TNF receptor associated ( 552) 1064 238.3 3.3e-60 gi|123209860|emb|CAM15136.1| novel protein similar ( 532) 925 208.4 3.3e-51 gi|210087285|gb|EEA35667.1| hypothetical protein B ( 644) 906 204.4 6.4e-50 gi|47223568|emb|CAF99177.1| unnamed protein produc ( 519) 897 202.3 2.1e-49 gi|210126382|gb|EEA74069.1| hypothetical protein B ( 503) 896 202.1 2.4e-49 gi|93117587|gb|ABE99696.1| TNF receptor associated ( 536) 893 201.5 3.9e-49 gi|73967509|ref|XP_537792.2| PREDICTED: similar to ( 523) 891 201.1 5.1e-49 gi|73967503|ref|XP_857114.1| PREDICTED: similar to ( 509) 890 200.8 5.8e-49 gi|73967505|ref|XP_848820.1| PREDICTED: similar to ( 518) 890 200.8 5.9e-49 gi|210087286|gb|EEA35668.1| hypothetical protein B ( 481) 889 200.6 6.5e-49 gi|210126378|gb|EEA74065.1| hypothetical protein B ( 552) 888 200.4 8.3e-49 gi|73967507|ref|XP_857202.1| PREDICTED: similar to ( 476) 886 199.9 1e-48 gi|73967511|ref|XP_857289.1| PREDICTED: similar to ( 501) 886 200.0 1e-48 gi|224072953|ref|XP_002190587.1| PREDICTED: hypoth ( 428) 885 199.7 1.1e-48 gi|210126476|gb|EEA74163.1| hypothetical protein B ( 482) 882 199.1 1.8e-48 gi|119904323|ref|XP_874100.2| PREDICTED: similar t ( 516) 881 198.9 2.3e-48 gi|194226052|ref|XP_001497958.2| PREDICTED: simila ( 548) 881 198.9 2.4e-48 gi|118099110|ref|XP_415560.2| PREDICTED: similar t ( 507) 879 198.5 3e-48 gi|210126473|gb|EEA74160.1| hypothetical protein B ( 631) 878 198.3 4.1e-48 gi|31620987|emb|CAD69021.2| tumor necrosis factor ( 526) 877 198.0 4.2e-48 gi|126302647|ref|XP_001366851.1| PREDICTED: simila ( 502) 875 197.6 5.4e-48 gi|731003|sp|P39429.1|TRAF2_MOUSE RecName: Full=TN ( 501) 874 197.4 6.3e-48 gi|26332439|dbj|BAC29937.1| unnamed protein produc ( 501) 874 197.4 6.3e-48 gi|26343105|dbj|BAC35209.1| unnamed protein produc ( 501) 874 197.4 6.3e-48 gi|2736258|gb|AAC53545.1| tumor necrosis factor re ( 508) 874 197.4 6.3e-48 gi|126302645|ref|XP_001366797.1| PREDICTED: simila ( 508) 874 197.4 6.3e-48 gi|210126470|gb|EEA74157.1| hypothetical protein B ( 474) 873 197.1 7e-48 >>gi|148676689|gb|EDL08636.1| Tnf receptor-associated fa (412 aa) initn: 2777 init1: 2777 opt: 2777 Z-score: 3231.3 bits: 606.8 E(): 2.8e-171 Smith-Waterman score: 2777; 100.000% identity (100.000% similar) in 412 aa overlap (1-412:1-412) 10 20 30 40 50 60 mFLJ00 NPKMASSSAPDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKCRADNLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NPKMASSSAPDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKCRADNLH 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 PVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLAVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLAVLK 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 EWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKE 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 KLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQTLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQTLA 190 200 210 220 230 240 250 260 270 280 290 300 mFLJ00 QKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYK 250 260 270 280 290 300 310 320 330 340 350 360 mFLJ00 LCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRP 310 320 330 340 350 360 370 380 390 400 410 mFLJ00 DLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA 370 380 390 400 410 >>gi|26325122|dbj|BAC26315.1| unnamed protein product [M (409 aa) initn: 2754 init1: 2754 opt: 2754 Z-score: 3204.6 bits: 601.9 E(): 8.7e-170 Smith-Waterman score: 2754; 100.000% identity (100.000% similar) in 409 aa overlap (4-412:1-409) 10 20 30 40 50 60 mFLJ00 NPKMASSSAPDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKCRADNLH ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MASSSAPDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKCRADNLH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 PVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLAVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLAVLK 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKE 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 KLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQTLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQTLA 180 190 200 210 220 230 250 260 270 280 290 300 mFLJ00 QKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYK 240 250 260 270 280 290 310 320 330 340 350 360 mFLJ00 LCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRP 300 310 320 330 340 350 370 380 390 400 410 mFLJ00 DLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA 360 370 380 390 400 >>gi|731002|sp|P39428.1|TRAF1_MOUSE RecName: Full=TNF re (409 aa) initn: 2751 init1: 2751 opt: 2751 Z-score: 3201.1 bits: 601.2 E(): 1.4e-169 Smith-Waterman score: 2751; 99.756% identity (100.000% similar) in 409 aa overlap (4-412:1-409) 10 20 30 40 50 60 mFLJ00 NPKMASSSAPDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKCRADNLH ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|731 MASSSAPDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKCRADNLH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 PVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLAVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|731 PVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLAVLK 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|731 EWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKE 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 KLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQTLA ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|731 KLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHLLSLEQRVVELQQTLA 180 190 200 210 220 230 250 260 270 280 290 300 mFLJ00 QKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|731 QKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYK 240 250 260 270 280 290 310 320 330 340 350 360 mFLJ00 LCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|731 LCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRP 300 310 320 330 340 350 370 380 390 400 410 mFLJ00 DLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|731 DLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA 360 370 380 390 400 >>gi|74203048|dbj|BAE26224.1| unnamed protein product [M (409 aa) initn: 2748 init1: 2748 opt: 2748 Z-score: 3197.6 bits: 600.6 E(): 2.1e-169 Smith-Waterman score: 2748; 99.756% identity (100.000% similar) in 409 aa overlap (4-412:1-409) 10 20 30 40 50 60 mFLJ00 NPKMASSSAPDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKCRADNLH ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 MASSSAPDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKCRADNLH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 PVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLAVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 PVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLAVLK 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKE 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 KLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQTLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 KLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQTLA 180 190 200 210 220 230 250 260 270 280 290 300 mFLJ00 QKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYK ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|742 QKDQVLGKLEHSLRLMEEASFDGTFLWKITSVTKRCHESVCGRTVSLFSPAFYTAKYGYK 240 250 260 270 280 290 310 320 330 340 350 360 mFLJ00 LCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRP 300 310 320 330 340 350 370 380 390 400 410 mFLJ00 DLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA 360 370 380 390 400 >>gi|66910221|gb|AAH96595.1| Tnf receptor-associated fac (409 aa) initn: 2728 init1: 2728 opt: 2728 Z-score: 3174.3 bits: 596.3 E(): 4.2e-168 Smith-Waterman score: 2728; 99.022% identity (99.756% similar) in 409 aa overlap (4-412:1-409) 10 20 30 40 50 60 mFLJ00 NPKMASSSAPDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKCRADNLH ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|669 MASSSAPDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKCRADNLH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 PVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLAVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|669 PVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLAVLK 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|669 EWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKE 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 KLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQTLA :::::::::::::::::::::::::::::::::::::::::::.::.::::::::::::: gi|669 KLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREYILGLEQRVVELQQTLA 180 190 200 210 220 230 250 260 270 280 290 300 mFLJ00 QKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|669 QKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYK 240 250 260 270 280 290 310 320 330 340 350 360 mFLJ00 LCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|669 LCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRP 300 310 320 330 340 350 370 380 390 400 410 mFLJ00 DLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA :::::::::::::::::::::::::::.::::::::::: :::::::::::: gi|669 DLSSASFQRPQSETNVASGCPLFFPLSQLQSPKHAYVKDGTMFLKCIVDTSA 360 370 380 390 400 >>gi|109469766|ref|XP_001080233.1| PREDICTED: similar to (480 aa) initn: 2610 init1: 2610 opt: 2610 Z-score: 3036.1 bits: 571.0 E(): 2.1e-160 Smith-Waterman score: 2610; 95.332% identity (98.280% similar) in 407 aa overlap (6-412:74-480) 10 20 30 mFLJ00 NPKMASSSAPDENEFQFGCPPAPCQDPSEPRVLCC :::::::::::::::::: :::::::.::: gi|109 RTQSWILGLLIREVSPVVPETPGHRKAQDGSSSAPDENEFQFGCPPAPSQDPSEPRALCC 50 60 70 80 90 100 40 50 60 70 80 90 mFLJ00 TACLSENLRDDEDRICPKCRADNLHPVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKG ::::::::::::.:::::::::.:.:::::: :::::: ::::: :.:::::::::::: gi|109 TACLSENLRDDEERICPKCRADGLQPVSPGSLLTQEKVLPDVAEAGIVCPFAGVGCSFKG 110 120 130 140 150 160 100 110 120 130 140 150 mFLJ00 SPQSMQEHEATSQSSHLYLLLAVLKEWKSSPGSNLGSAPMALERNLSELQLQAAVEATGD ::::.::::::::::::::::.:::::::::: ::::::::::.:::::::: :::.::: gi|109 SPQSVQEHEATSQSSHLYLLLGVLKEWKSSPGPNLGSAPMALEQNLSELQLQEAVEVTGD 170 180 190 200 210 220 160 170 180 190 200 210 mFLJ00 LEVDCYRAPCCESQEELALQHLVKEKLLAQLEEKLRVFANIVAVLNKEVEASHLALAASI ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|109 LEVDCYRAPCCESQEELALQHLLKEKLLAQLEEKLRVFANIVAVLNKEVEASHLALAASI 230 240 250 260 270 280 220 230 240 250 260 270 mFLJ00 HQSQLDREHILSLEQRVVELQQTLAQKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKR :::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HQSQLDREHVLNLEQRVVELQQTLAQKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKR 290 300 310 320 330 340 280 290 300 310 320 330 mFLJ00 CHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPW 350 360 370 380 390 400 340 350 360 370 380 390 mFLJ00 PFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHA 410 420 430 440 450 460 400 410 mFLJ00 YVKDDTMFLKCIVDTSA ::::::::::::::::: gi|109 YVKDDTMFLKCIVDTSA 470 480 >>gi|6707734|sp|Q13077.1|TRAF1_HUMAN RecName: Full=TNF r (416 aa) initn: 2016 init1: 2016 opt: 2348 Z-score: 2732.2 bits: 514.5 E(): 1.8e-143 Smith-Waterman score: 2348; 84.578% identity (93.976% similar) in 415 aa overlap (4-411:1-415) 10 20 30 40 50 mFLJ00 NPKMASSS------APDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKC ::::: ::::::: :::::. ::::.:::.:::..::::: :. ::.::::: gi|670 MASSSGSSPRPAPDENEFPFGCPPTVCQDPKEPRALCCAGCLSENPRNGEDQICPKC 10 20 30 40 50 60 70 80 90 100 110 mFLJ00 RADNLHPVSPGSPL-TQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLY :...:. .:::: : ::::.: .:::: : ::::::::::::::::.::::.:::.::: gi|670 RGEDLQSISPGSRLRTQEKAHPEVAEAGIGCPFAGVGCSFKGSPQSVQEHEVTSQTSHLN 60 70 80 90 100 110 120 130 140 150 160 170 mFLJ00 LLLAVLKEWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELA :::. .:.::. : .: :.:::::.:::.::::::::..:::::::::::: ::::::: gi|670 LLLGFMKQWKARLGCGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELA 120 130 140 150 160 170 180 190 200 210 220 230 mFLJ00 LQHLVKEKLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVV :::..::::::.:: ::::: ::::::::::::::::::.::::::::::.::::::::: gi|670 LQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRVV 180 190 200 210 220 230 240 250 260 270 280 290 mFLJ00 ELQQTLAQKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFY :::::::::::.:::::.::::::::::::::::::::::.:::::.::::::::::::: gi|670 ELQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFY 240 250 260 270 280 290 300 310 320 330 340 350 mFLJ00 TAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREH ::::::::::::::::::.::.:::::::::::::::::::::::::::::::::::::: gi|670 TAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREH 300 310 320 330 340 350 360 370 380 390 400 410 mFLJ00 AIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|670 AIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETST 360 370 380 390 400 410 >>gi|109110420|ref|XP_001095862.1| PREDICTED: similar to (416 aa) initn: 2341 init1: 2006 opt: 2348 Z-score: 2732.2 bits: 514.5 E(): 1.8e-143 Smith-Waterman score: 2348; 84.337% identity (94.458% similar) in 415 aa overlap (4-411:1-415) 10 20 30 40 50 mFLJ00 NPKMASSS------APDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKC ::::: ::::::: :::::. :.::.:::.::::.:::::::..::.::::: gi|109 MASSSGSSPRPAPDENEFPFGCPPTVCRDPKEPRALCCTGCLSENLRNSEDQICPKC 10 20 30 40 50 60 70 80 90 100 110 mFLJ00 RADNLHPVSPGSPL-TQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLY :...:. ::::: : : :..: .:::: . ::::::::::::::::.::::.:::.::: gi|109 RGEDLQSVSPGSRLRTLERAHPEVAEAGVGCPFAGVGCSFKGSPQSVQEHEVTSQTSHLN 60 70 80 90 100 110 120 130 140 150 160 170 mFLJ00 LLLAVLKEWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELA :::. .:.::. ::.: :.:::::.:::.::::::::..:::::::::::: ::::::: gi|109 LLLGFMKQWKTRLGSGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELA 120 130 140 150 160 170 180 190 200 210 220 230 mFLJ00 LQHLVKEKLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVV :::..::::::.:: ::::: ::::::::::::::::::.::::::::::.::::::::: gi|109 LQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRVV 180 190 200 210 220 230 240 250 260 270 280 290 mFLJ00 ELQQTLAQKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFY :::::::::::.:::::.::::::::::::::::::::::.:::::.::::::::::::: gi|109 ELQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFY 240 250 260 270 280 290 300 310 320 330 340 350 mFLJ00 TAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREH ::::::::::::::::::.::.:::::::::::::::::::::::::::::::::::::: gi|109 TAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREH 300 310 320 330 340 350 360 370 380 390 400 410 mFLJ00 AIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA :::::::::::::::::::::::::::::::::.:::::::::::::::::::::.:: gi|109 AIDAFRPDLSSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDTMFLKCIVETST 360 370 380 390 400 410 >>gi|114626393|ref|XP_001158250.1| PREDICTED: TNF recept (416 aa) initn: 2007 init1: 2007 opt: 2339 Z-score: 2721.8 bits: 512.6 E(): 6.7e-143 Smith-Waterman score: 2339; 83.855% identity (93.976% similar) in 415 aa overlap (4-411:1-415) 10 20 30 40 50 mFLJ00 NPKMASSS------APDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKC ::::: ::::::: :::::. ::::.:::.:::..::::: :. ::.::::: gi|114 MASSSGSSPRPAPDENEFPFGCPPTVCQDPKEPRALCCAGCLSENPRNGEDQICPKC 10 20 30 40 50 60 70 80 90 100 110 mFLJ00 RADNLHPVSPGSPL-TQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLY :...:. .:::: : ::::.: .:::: . ::::::::::::::::.::::.:::.::: gi|114 RGEDLQSISPGSRLRTQEKAHPEVAEAGVGCPFAGVGCSFKGSPQSVQEHEVTSQTSHLN 60 70 80 90 100 110 120 130 140 150 160 170 mFLJ00 LLLAVLKEWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELA :::. .:.::. : .: :.:::::.:::.::::::::..:::::::::::: ::::::: gi|114 LLLGFMKQWKARLGCGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELA 120 130 140 150 160 170 180 190 200 210 220 230 mFLJ00 LQHLVKEKLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVV :::..::::::.:: ::::: ::::::::::::::::::.::::::::::.::::::::: gi|114 LQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRVV 180 190 200 210 220 230 240 250 260 270 280 290 mFLJ00 ELQQTLAQKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFY :::::::::::.:::::.::::::::::::::::::::::.:::::.::::.:::::::: gi|114 ELQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTISLFSPAFY 240 250 260 270 280 290 300 310 320 330 340 350 mFLJ00 TAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREH ::::::::::::::::::.::.:::::::::::::::::::::::::::::::::::::: gi|114 TAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREH 300 310 320 330 340 350 360 370 380 390 400 410 mFLJ00 AIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA ::::::::::::::::::::::::::::::.::::::::::::::::::::::::.:: gi|114 AIDAFRPDLSSASFQRPQSETNVASGCPLFLPLSKLQSPKHAYVKDDTMFLKCIVETST 360 370 380 390 400 410 >>gi|149738082|ref|XP_001504769.1| PREDICTED: TNF recept (415 aa) initn: 2324 init1: 2324 opt: 2324 Z-score: 2704.3 bits: 509.4 E(): 6.3e-142 Smith-Waterman score: 2324; 83.911% identity (95.050% similar) in 404 aa overlap (9-412:12-415) 10 20 30 40 50 mFLJ00 NPKMASSSAPDENEFQFGCPPAPCQDPSEPRVLCCTACLSENLRDDEDRICPKCRAD ::::::: :::::. :.::::::.:::.:::::: :. :::.: :::.: gi|149 MASGSASSPRPAPDENEFPFGCPPTVCEDPSEPRALCCAACLSENSRNGEDRVCLKCRGD 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 NLHPVSPGSPLTQEKVHSDVAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLA . . :.::: ..::: .:::: . ::::::::::::::. :::::..::..:: :.:. gi|149 DSQSVGPGSLVSQEKDLPEVAEAGVGCPFAGVGCSFKGSPKFMQEHEVASQATHLNLVLG 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 VLKEWKSSPGSNLGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHL .:.::.. ::.:::.:::::.:::.::::::::..:::::::::::: ::::::::::. gi|149 FMKQWKAQLGSGLGSGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHF 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 VKEKLLAQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQ .::::::.:: ::::: ::::::::::::::::::::::::::::::::::::::.:::: gi|149 MKEKLLAELEGKLRVFENIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVLELQQ 190 200 210 220 230 240 240 250 260 270 280 290 mFLJ00 TLAQKDQVLGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKY :::::::.:::::.::::::::::::::::::::::.:::::.::::::::::::::::: gi|149 TLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKY 250 260 270 280 290 300 300 310 320 330 340 350 mFLJ00 GYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDA ::::::::::::::.::.::::::::::::::::::::::::::::::.::::::::::: gi|149 GYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLIDQNNREHAIDA 310 320 330 340 350 360 360 370 380 390 400 410 mFLJ00 FRPDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA :::::.::::::::::::::::::::::::.::::::::::::::::::::.::: gi|149 FRPDLNSASFQRPQSETNVASGCPLFFPLSRLQSPKHAYVKDDTMFLKCIVETSA 370 380 390 400 410 412 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 09:33:20 2009 done: Fri Mar 13 09:39:47 2009 Total Scan time: 879.730 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]