# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mtk00194.fasta.nr -Q ../query/mKIAA1254.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA1254, 219 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7921148 sequences
Expectation_n fit: rho(ln(x))= 4.7378+/-0.000188; mu= 10.1903+/- 0.010
mean_var=67.0351+/-13.101, 0's: 38 Z-trim: 38 B-trim: 1092 in 1/64
Lambda= 0.156647
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|13879477|gb|AAH06717.1| Ccpg1 protein [Mus musc ( 374) 1527 353.6 2.3e-95
gi|160380574|sp|Q640L3.2|CCPG1_MOUSE RecName: Full ( 753) 1527 353.9 3.9e-95
gi|52139180|gb|AAH82602.1| Ccpg1 protein [Mus musc ( 752) 1516 351.4 2.2e-94
gi|148694331|gb|EDL26278.1| cell cycle progression ( 778) 1432 332.4 1.2e-88
gi|116283903|gb|AAH43049.1| Ccpg1 protein [Mus mus ( 803) 1432 332.4 1.2e-88
gi|148694330|gb|EDL26277.1| cell cycle progression ( 804) 1432 332.4 1.2e-88
gi|149028777|gb|EDL84118.1| cell cycle progression ( 751) 1379 320.4 4.6e-85
gi|149028776|gb|EDL84117.1| cell cycle progression ( 776) 1284 299.0 1.4e-78
gi|194670770|ref|XP_580792.4| PREDICTED: cell cycl ( 760) 876 206.7 7.7e-51
gi|119597890|gb|EAW77484.1| cell cycle progression ( 482) 872 205.7 1e-50
gi|194206631|ref|XP_001501004.2| PREDICTED: simila ( 760) 874 206.3 1e-50
gi|119597889|gb|EAW77483.1| cell cycle progression ( 613) 872 205.8 1.2e-50
gi|160380597|sp|Q9ULG6.3|CCPG1_HUMAN RecName: Full ( 757) 872 205.8 1.4e-50
gi|168278837|dbj|BAG11298.1| cell cycle progressio ( 757) 872 205.8 1.4e-50
gi|114657183|ref|XP_001171080.1| PREDICTED: cell c ( 613) 871 205.5 1.4e-50
gi|114657175|ref|XP_523082.2| PREDICTED: cell cycl ( 757) 871 205.6 1.7e-50
gi|23025755|gb|AAH34914.1| CCPG1 protein [Homo sap ( 613) 867 204.6 2.7e-50
gi|74000215|ref|XP_863571.1| PREDICTED: similar to ( 759) 859 202.9 1.1e-49
gi|2352906|gb|AAB69314.1| cell cycle progression r ( 375) 803 190.0 4.2e-46
gi|13182737|gb|AAK14914.1|AF212228_1 CCP8 [Homo sa ( 755) 801 189.8 9.6e-46
gi|158259051|dbj|BAF85484.1| unnamed protein produ ( 807) 796 188.7 2.2e-45
gi|114657169|ref|XP_001171139.1| PREDICTED: hypoth ( 807) 795 188.5 2.6e-45
gi|114657167|ref|XP_001171122.1| PREDICTED: hypoth ( 812) 795 188.5 2.6e-45
gi|109081233|ref|XP_001087398.1| PREDICTED: simila ( 943) 782 185.6 2.2e-44
gi|75041295|sp|Q5R6R3.1|CCPG1_PONAB RecName: Full= ( 806) 772 183.3 9.5e-44
gi|74000213|ref|XP_544691.2| PREDICTED: similar to ( 809) 771 183.0 1.1e-43
gi|194034693|ref|XP_001928744.1| PREDICTED: simila ( 724) 766 181.9 2.2e-43
gi|126277195|ref|XP_001368418.1| PREDICTED: hypoth ( 814) 641 153.7 7.8e-35
gi|148694329|gb|EDL26276.1| cell cycle progression ( 558) 638 152.8 9.5e-35
gi|74189182|dbj|BAC36301.2| unnamed protein produc ( 638) 638 152.9 1e-34
gi|148694332|gb|EDL26279.1| cell cycle progression ( 638) 638 152.9 1e-34
gi|149636708|ref|XP_001511582.1| PREDICTED: hypoth ( 814) 564 136.3 1.4e-29
gi|149636710|ref|XP_001511612.1| PREDICTED: hypoth ( 816) 564 136.3 1.4e-29
gi|149028774|gb|EDL84115.1| cell cycle progression ( 560) 550 133.0 9.2e-29
gi|149028775|gb|EDL84116.1| cell cycle progression ( 636) 550 133.0 1e-28
gi|224062426|ref|XP_002197732.1| PREDICTED: cell c ( 808) 480 117.3 7e-24
gi|223647502|gb|ACN10509.1| Cell cycle progression ( 861) 452 111.0 5.9e-22
gi|82082832|sp|Q5ZM60.1|CCPG1_CHICK RecName: Full= ( 801) 446 109.6 1.4e-21
gi|114657171|ref|XP_001171155.1| PREDICTED: cell c ( 724) 435 107.1 7.4e-21
gi|189541710|ref|XP_001922366.1| PREDICTED: simila ( 512) 424 104.4 3.2e-20
gi|47230378|emb|CAF99571.1| unnamed protein produc ( 708) 354 88.7 2.4e-15
gi|120538114|gb|AAI29143.1| Zgc:158151 [Danio reri ( 792) 223 59.2 2.1e-06
gi|118600851|gb|AAH29398.1| CCPG1 protein [Homo sa ( 319) 205 54.8 1.8e-05
gi|10433862|dbj|BAB14042.1| unnamed protein produc ( 424) 205 54.9 2.2e-05
gi|114657173|ref|XP_001171100.1| PREDICTED: hypoth ( 424) 205 54.9 2.2e-05
gi|119597891|gb|EAW77485.1| cell cycle progression ( 424) 205 54.9 2.2e-05
gi|224154860|ref|XP_002199180.1| PREDICTED: hypoth ( 421) 191 51.7 0.0002
gi|194036093|ref|XP_001926976.1| PREDICTED: simila ( 609) 188 51.2 0.00042
gi|149048048|gb|EDM00624.1| pre-B-cell leukemia tr ( 630) 188 51.2 0.00043
gi|158706096|sp|A2VD12.1|PBIP1_RAT RecName: Full=P ( 722) 188 51.2 0.00047
>>gi|13879477|gb|AAH06717.1| Ccpg1 protein [Mus musculus (374 aa)
initn: 1527 init1: 1527 opt: 1527 Z-score: 1868.3 bits: 353.6 E(): 2.3e-95
Smith-Waterman score: 1527; 100.000% identity (100.000% similar) in 219 aa overlap (1-219:156-374)
10 20 30
mKIAA1 FKDTTKNIFDEKGSKRFRAPKEAATEKTRT
::::::::::::::::::::::::::::::
gi|138 HHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDEKGSKRFRAPKEAATEKTRT
130 140 150 160 170 180
40 50 60 70 80 90
mKIAA1 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|138 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
190 200 210 220 230 240
100 110 120 130 140 150
mKIAA1 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|138 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
250 260 270 280 290 300
160 170 180 190 200 210
mKIAA1 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPRSVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|138 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPRSVY
310 320 330 340 350 360
mKIAA1 IKPCYYNSF
:::::::::
gi|138 IKPCYYNSF
370
>>gi|160380574|sp|Q640L3.2|CCPG1_MOUSE RecName: Full=Cel (753 aa)
initn: 1527 init1: 1527 opt: 1527 Z-score: 1864.3 bits: 353.9 E(): 3.9e-95
Smith-Waterman score: 1527; 100.000% identity (100.000% similar) in 219 aa overlap (1-219:535-753)
10 20 30
mKIAA1 FKDTTKNIFDEKGSKRFRAPKEAATEKTRT
::::::::::::::::::::::::::::::
gi|160 HHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDEKGSKRFRAPKEAATEKTRT
510 520 530 540 550 560
40 50 60 70 80 90
mKIAA1 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|160 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
570 580 590 600 610 620
100 110 120 130 140 150
mKIAA1 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|160 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
630 640 650 660 670 680
160 170 180 190 200 210
mKIAA1 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPRSVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|160 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPRSVY
690 700 710 720 730 740
mKIAA1 IKPCYYNSF
:::::::::
gi|160 IKPCYYNSF
750
>>gi|52139180|gb|AAH82602.1| Ccpg1 protein [Mus musculus (752 aa)
initn: 1516 init1: 1516 opt: 1516 Z-score: 1850.8 bits: 351.4 E(): 2.2e-94
Smith-Waterman score: 1516; 99.543% identity (99.543% similar) in 219 aa overlap (1-219:534-752)
10 20 30
mKIAA1 FKDTTKNIFDEKGSKRFRAPKEAATEKTRT
::::::::::::::::::::::::::::::
gi|521 HHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDEKGSKRFRAPKEAATEKTRT
510 520 530 540 550 560
40 50 60 70 80 90
mKIAA1 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|521 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
570 580 590 600 610 620
100 110 120 130 140 150
mKIAA1 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|521 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFS
630 640 650 660 670 680
160 170 180 190 200 210
mKIAA1 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPRSVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|521 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPRSVY
690 700 710 720 730 740
mKIAA1 IKPCYYNSF
:::::::::
gi|521 IKPCYYNSF
750
>>gi|148694331|gb|EDL26278.1| cell cycle progression 1, (778 aa)
initn: 1432 init1: 1432 opt: 1432 Z-score: 1748.0 bits: 332.4 E(): 1.2e-88
Smith-Waterman score: 1432; 100.000% identity (100.000% similar) in 206 aa overlap (1-206:535-740)
10 20 30
mKIAA1 FKDTTKNIFDEKGSKRFRAPKEAATEKTRT
::::::::::::::::::::::::::::::
gi|148 HHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDEKGSKRFRAPKEAATEKTRT
510 520 530 540 550 560
40 50 60 70 80 90
mKIAA1 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
570 580 590 600 610 620
100 110 120 130 140 150
mKIAA1 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
630 640 650 660 670 680
160 170 180 190 200 210
mKIAA1 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPRSVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPSRPD
690 700 710 720 730 740
mKIAA1 IKPCYYNSF
gi|148 KKQRMVTIENARHRKQEQKHLHPQPYEREEPVGL
750 760 770
>>gi|116283903|gb|AAH43049.1| Ccpg1 protein [Mus musculu (803 aa)
initn: 1432 init1: 1432 opt: 1432 Z-score: 1747.9 bits: 332.4 E(): 1.2e-88
Smith-Waterman score: 1432; 100.000% identity (100.000% similar) in 206 aa overlap (1-206:535-740)
10 20 30
mKIAA1 FKDTTKNIFDEKGSKRFRAPKEAATEKTRT
::::::::::::::::::::::::::::::
gi|116 HHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDEKGSKRFRAPKEAATEKTRT
510 520 530 540 550 560
40 50 60 70 80 90
mKIAA1 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
570 580 590 600 610 620
100 110 120 130 140 150
mKIAA1 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
630 640 650 660 670 680
160 170 180 190 200 210
mKIAA1 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPRSVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPSRPD
690 700 710 720 730 740
mKIAA1 IKPCYYNSF
gi|116 KKQRMVTIENARHRKQEQKHLHPQPYEREGKWQKYGRANGRHTANLELELGQLPFDPKY
750 760 770 780 790 800
>>gi|148694330|gb|EDL26277.1| cell cycle progression 1, (804 aa)
initn: 1432 init1: 1432 opt: 1432 Z-score: 1747.9 bits: 332.4 E(): 1.2e-88
Smith-Waterman score: 1432; 100.000% identity (100.000% similar) in 206 aa overlap (1-206:536-741)
10 20 30
mKIAA1 FKDTTKNIFDEKGSKRFRAPKEAATEKTRT
::::::::::::::::::::::::::::::
gi|148 HHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDEKGSKRFRAPKEAATEKTRT
510 520 530 540 550 560
40 50 60 70 80 90
mKIAA1 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
570 580 590 600 610 620
100 110 120 130 140 150
mKIAA1 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
630 640 650 660 670 680
160 170 180 190 200 210
mKIAA1 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPRSVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPSRPD
690 700 710 720 730 740
mKIAA1 IKPCYYNSF
gi|148 KKQRMVTIENARHRKQEQKHLHPQPYEREGKWQKYGRANGRHTANLELELGQLPFDPKY
750 760 770 780 790 800
>>gi|149028777|gb|EDL84118.1| cell cycle progression 1 ( (751 aa)
initn: 1379 init1: 1379 opt: 1379 Z-score: 1683.5 bits: 320.4 E(): 4.6e-85
Smith-Waterman score: 1379; 89.954% identity (95.890% similar) in 219 aa overlap (1-219:533-751)
10 20 30
mKIAA1 FKDTTKNIFDEKGSKRFRAPKEAATEKTRT
::::::::::::::::::: :: :::: ::
gi|149 HHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDEKGSKRFRASKEEATEKPRT
510 520 530 540 550 560
40 50 60 70 80 90
mKIAA1 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
::::::::..:::.:::::: :::::: ::::::::::::...:::::::: ::::::::
gi|149 AYSYSSYSEREAPDQNQNCRGPSAQRDRGREKPSHSEEIRQTTNSYTYKAKFDCRGTHST
570 580 590 600 610 620
100 110 120 130 140 150
mKIAA1 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
:.::::::::::::.:::::.:.:::::::::::::::::::.::::::::::::::::
gi|149 RKVCSGMFECAGQESISPVNQAGPVRMNDFKQLIHWYLLNELDTFHHWKELDQFISPFFL
630 640 650 660 670 680
160 170 180 190 200 210
mKIAA1 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPRSVY
::::::::. ::::::::::::::::::.::: :::::::::::::::::::::::::::
gi|149 NGVFRHDQKPFADFVDDVKGYLKSIKEYQVEDDNLEKLDGCIYRHFGHVFALPFGPRSVY
690 700 710 720 730 740
mKIAA1 IKPCYYNSF
:::::::::
gi|149 IKPCYYNSF
750
>>gi|149028776|gb|EDL84117.1| cell cycle progression 1 ( (776 aa)
initn: 1284 init1: 1284 opt: 1284 Z-score: 1567.3 bits: 299.0 E(): 1.4e-78
Smith-Waterman score: 1284; 89.320% identity (95.631% similar) in 206 aa overlap (1-206:533-738)
10 20 30
mKIAA1 FKDTTKNIFDEKGSKRFRAPKEAATEKTRT
::::::::::::::::::: :: :::: ::
gi|149 HHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDEKGSKRFRASKEEATEKPRT
510 520 530 540 550 560
40 50 60 70 80 90
mKIAA1 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
::::::::..:::.:::::: :::::: ::::::::::::...:::::::: ::::::::
gi|149 AYSYSSYSEREAPDQNQNCRGPSAQRDRGREKPSHSEEIRQTTNSYTYKAKFDCRGTHST
570 580 590 600 610 620
100 110 120 130 140 150
mKIAA1 RRVCSGMFECAGQEAISPVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPFFP
:.::::::::::::.:::::.:.:::::::::::::::::::.::::::::::::::::
gi|149 RKVCSGMFECAGQESISPVNQAGPVRMNDFKQLIHWYLLNELDTFHHWKELDQFISPFFL
630 640 650 660 670 680
160 170 180 190 200 210
mKIAA1 NGVFRHDQQLFADFVDDVKGYLKSIKEYRVEDGNLEKLDGCIYRHFGHVFALPFGPRSVY
::::::::. ::::::::::::::::::.::: :::::::::::::::::::::::
gi|149 NGVFRHDQKPFADFVDDVKGYLKSIKEYQVEDDNLEKLDGCIYRHFGHVFALPFGPSRPD
690 700 710 720 730 740
mKIAA1 IKPCYYNSF
gi|149 KKQRMVNIENSRHRKQEQKHLHPQPCKREEPVGL
750 760 770
>>gi|194670770|ref|XP_580792.4| PREDICTED: cell cycle pr (760 aa)
initn: 812 init1: 331 opt: 876 Z-score: 1069.1 bits: 206.7 E(): 7.7e-51
Smith-Waterman score: 876; 60.268% identity (82.143% similar) in 224 aa overlap (1-219:539-760)
10 20 30
mKIAA1 FKDTTKNIFDEKGSKRFRAPKEAATEKTRT
:::::::::::::.::: : ::.:..: :
gi|194 HHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDEKGNKRFGATKETAAKKP-T
510 520 530 540 550 560
40 50 60 70 80 90
mKIAA1 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCRGTHST
..: . : .: .:::: : :. ::.: .::: : ::. ::.:: .:. :: :....
gi|194 TFSEYFHPQYKARTQNQNSRGPTMQREGRKEKP-HFEEFGKNTNSQKCSAEHDCGGNYNS
570 580 590 600 610 620
100 110 120 130 140
mKIAA1 -RRVCSGMFECAGQEAIS--PVNKASPVRMNDFKQLIHWYLLNELETFHHWKELDQFISP
:..:::.:::: ::.:. :. .:::...:.:::. :::..:..::::::::.::.
gi|194 FRKACSGVFECAQQESINLFNVKMLNPVRIDEFRQLIEGYLLEKLDSFHHWKELDHFINK
630 640 650 660 670 680
150 160 170 180 190 200
mKIAA1 FFPNGVFRHDQQLFADFVDDVKGYLKSIKEYRVE-DGNLEKLDGCIYRHF-GHVFALPFG
:: :::: :::.::.:::.::: :::..:::.:. :: .::::: ::::: ::.:. :.:
gi|194 FFLNGVFIHDQKLFTDFVNDVKDYLKDMKEYQVDNDGVFEKLDGYIYRHFFGHTFSPPYG
690 700 710 720 730 740
210
mKIAA1 PRSVYIKPCYYNSF
:::::: :::::::
gi|194 PRSVYIAPCYYNSF
750 760
>>gi|119597890|gb|EAW77484.1| cell cycle progression 1, (482 aa)
initn: 836 init1: 309 opt: 872 Z-score: 1066.8 bits: 205.7 E(): 1e-50
Smith-Waterman score: 872; 58.744% identity (81.614% similar) in 223 aa overlap (1-219:261-482)
10 20 30
mKIAA1 FKDTTKNIFDEKGSKRFRAPKEAATEKTRT
:::::::::::::.::: : :::: :: ::
gi|119 HHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDEKGNKRFGATKEAA-EKPRT
240 250 260 270 280
40 50 60 70 80
mKIAA1 AYSYSSYSQQEAPNQNQNCRRPSAQRDGGREKPSHSEEIRKNANSYTYKAKSDCR-GTHS
..: . : .::..:.. : :. : :: .::: : .:.:::.:: . ::: ..::
gi|119 VFSDYLHPQYKAPTENHHNRGPTMQNDGRKEKPVHFKEFRKNTNSKKCSPGHDCRENSHS
290 300 310 320 330 340
90 100 110 120 130 140
mKIAA1 TRRVCSGMFECAGQEAISPVNKA-SPVRMNDFKQLIHWYLLNELETFHHWKELDQFISPF
:..:::.:.:: ::..: : . .:.::..:.:.:. :.:.::.:: ::.::::::. :
gi|119 FRKACSGVFDCAQQESMSLFNTVVNPIRMDEFRQIIQRYMLKELDTFCHWNELDQFINKF
350 360 370 380 390 400
150 160 170 180 190 200
mKIAA1 FPNGVFRHDQQLFADFVDDVKGYLKSIKEYRVE-DGNLEKLDGCIYRHF-GHVFALPFGP
: :::: :::.::.:::.::: ::...:::.:. :: .:::: ::::: ::.:. :.::
gi|119 FLNGVFIHDQKLFTDFVNDVKDYLRNMKEYEVDNDGVFEKLDEYIYRHFFGHTFSPPYGP
410 420 430 440 450 460
210
mKIAA1 RSVYIKPCYYNSF
::::::::.:.:.
gi|119 RSVYIKPCHYSSL
470 480
219 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Mar 13 10:45:57 2009 done: Fri Mar 13 10:50:46 2009
Total Scan time: 685.020 Total Display time: 0.050
Function used was FASTA [version 34.26.5 April 26, 2007]