# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mtk00084.fasta.nr -Q ../query/mKIAA0020.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0020, 496 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920866 sequences Expectation_n fit: rho(ln(x))= 5.3287+/-0.000182; mu= 10.3760+/- 0.010 mean_var=72.4639+/-14.151, 0's: 31 Z-trim: 35 B-trim: 0 in 0/67 Lambda= 0.150665 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26341530|dbj|BAC34427.1| unnamed protein produc ( 648) 3188 702.3 9.6e-200 gi|148709704|gb|EDL41650.1| DNA segment, Chr 19, B ( 661) 3188 702.3 9.8e-200 gi|148709703|gb|EDL41649.1| DNA segment, Chr 19, B ( 665) 3168 698.0 2e-198 gi|26353010|dbj|BAC40135.1| unnamed protein produc ( 485) 3059 674.2 2.1e-191 gi|109511374|ref|XP_215276.4| PREDICTED: similar t ( 647) 2978 656.7 5.3e-186 gi|109514142|ref|XP_001066994.1| PREDICTED: simila ( 691) 2978 656.7 5.6e-186 gi|189054927|dbj|BAG37911.1| unnamed protein produ ( 508) 2962 653.1 4.9e-185 gi|73946899|ref|XP_533539.2| PREDICTED: similar to ( 720) 2949 650.4 4.6e-184 gi|149062644|gb|EDM13067.1| rCG47785, isoform CRA_ ( 465) 2689 593.8 3.3e-167 gi|149412872|ref|XP_001507108.1| PREDICTED: simila ( 729) 2528 558.9 1.6e-156 gi|27694961|gb|AAH43888.1| LOC398471 protein [Xeno ( 616) 2324 514.5 3.2e-143 gi|125827083|ref|XP_695580.2| PREDICTED: hypotheti ( 629) 2324 514.5 3.2e-143 gi|56789610|gb|AAH88719.1| LOC398471 protein [Xeno ( 641) 2324 514.5 3.3e-143 gi|49899044|gb|AAH76757.1| MGC83110 protein [Xenop ( 642) 2323 514.3 3.8e-143 gi|134024074|gb|AAI35311.1| LOC100038289 protein [ ( 632) 2319 513.4 6.9e-143 gi|170284765|gb|AAI61436.1| LOC100038289 protein [ ( 642) 2319 513.4 6.9e-143 gi|47214298|emb|CAG00964.1| unnamed protein produc ( 598) 1754 390.6 6.1e-106 gi|210102856|gb|EEA50899.1| hypothetical protein B ( 706) 1589 354.8 4.4e-95 gi|30851275|gb|AAH52686.1| D19Bwg1357e protein [Mu ( 250) 1531 341.9 1.2e-91 gi|156221696|gb|EDO42548.1| predicted protein [Nem ( 631) 1438 321.9 3e-85 gi|72152033|ref|XP_788454.1| PREDICTED: hypothetic ( 668) 1436 321.5 4.3e-85 gi|115744100|ref|XP_001197420.1| PREDICTED: hypoth ( 668) 1436 321.5 4.3e-85 gi|210093830|gb|EEA42025.1| hypothetical protein B ( 535) 1387 310.8 5.8e-82 gi|26327335|dbj|BAC27411.1| unnamed protein produc ( 226) 1278 286.9 3.9e-75 gi|198421918|ref|XP_002127849.1| PREDICTED: simila ( 599) 1235 277.8 5.6e-72 gi|198421920|ref|XP_002127867.1| PREDICTED: simila ( 599) 1230 276.7 1.2e-71 gi|215505765|gb|EEC15259.1| conserved hypothetical ( 644) 1076 243.3 1.5e-61 gi|163779389|gb|EDQ93003.1| predicted protein [Mon ( 408) 940 213.6 8.2e-53 gi|156553088|ref|XP_001599242.1| PREDICTED: simila ( 658) 834 190.7 1e-45 gi|1176902|sp|Q09622.1|YS83_CAEEL RecName: Full=Pu ( 766) 812 185.9 3.2e-44 gi|187028687|emb|CAP32214.1| C. briggsae CBR-PUF-1 ( 761) 811 185.7 3.8e-44 gi|91089527|ref|XP_971048.1| PREDICTED: similar to ( 602) 794 181.9 4e-43 gi|212001098|gb|EEB06758.1| puf family RNA-binding ( 642) 770 176.7 1.6e-41 gi|60465063|gb|EAL63168.1| Pumilio RNA-binding reg ( 679) 746 171.5 6.1e-40 gi|74638900|sp|Q9UU76.1|PUF6_SCHPO RecName: Full=P ( 642) 736 169.4 2.6e-39 gi|49651402|emb|CAG78341.1| YALI0F17358p [Yarrowia ( 653) 705 162.6 2.9e-37 gi|85719999|gb|ABC75568.1| hypothetical protein [I ( 131) 641 148.2 1.2e-33 gi|193587362|ref|XP_001950413.1| PREDICTED: simila ( 404) 638 147.9 4.7e-33 gi|110761596|ref|XP_001121072.1| PREDICTED: simila ( 509) 638 148.0 5.7e-33 gi|157352947|emb|CAO44837.1| unnamed protein produ ( 658) 624 145.0 5.7e-32 gi|147770751|emb|CAN62467.1| hypothetical protein ( 662) 616 143.3 1.9e-31 gi|162668905|gb|EDQ55503.1| predicted protein [Phy ( 586) 615 143.0 2e-31 gi|222863393|gb|EEF00524.1| predicted protein [Pop ( 655) 614 142.8 2.6e-31 gi|222838572|gb|EEE76937.1| predicted protein [Pop ( 655) 614 142.8 2.6e-31 gi|7939573|dbj|BAA95774.1| unnamed protein product ( 641) 612 142.4 3.4e-31 gi|149062645|gb|EDM13068.1| rCG47785, isoform CRA_ ( 108) 600 139.3 5e-31 gi|108873955|gb|EAT38180.1| conserved hypothetical ( 687) 608 141.5 6.6e-31 gi|158274771|gb|EDP00551.1| puf protein [Chlamydom ( 717) 600 139.8 2.3e-30 gi|34922920|sp|Q04373.1|PUF6_YEAST RecName: Full=P ( 656) 587 137.0 1.5e-29 gi|190404583|gb|EDV07850.1| protein PUF6 [Saccharo ( 656) 586 136.8 1.8e-29 >>gi|26341530|dbj|BAC34427.1| unnamed protein product [M (648 aa) initn: 3188 init1: 3188 opt: 3188 Z-score: 3742.3 bits: 702.3 E(): 9.6e-200 Smith-Waterman score: 3188; 100.000% identity (100.000% similar) in 496 aa overlap (1-496:153-648) 10 20 30 mKIAA0 EKRVKLMSDLQKLIQGKIKTIAFAHDSTRV :::::::::::::::::::::::::::::: gi|263 SRQLSDKTNYDIVVRAKHIWESLRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRV 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA0 IQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 IQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHV 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA0 RKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLELQPAKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLELQPAKL 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA0 ELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVYLAHTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVYLAHTH 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA0 DGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIII 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA0 SEIISSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDTAIRRREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SEIISSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDTAIRRREL 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA0 LESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAAELHPGGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAAELHPGGK 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA0 DGELHVAEHPAGHLVLKWLLEQDKKMKESGKEGCFAKTLVERVGMKNLKSWASINRGAII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DGELHVAEHPAGHLVLKWLLEQDKKMKESGKEGCFAKTLVERVGMKNLKSWASINRGAII 550 560 570 580 590 600 460 470 480 490 mKIAA0 LSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA :::::::::::::::::::::::::::::::::::::::::::::: gi|263 LSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA 610 620 630 640 >>gi|148709704|gb|EDL41650.1| DNA segment, Chr 19, Brigh (661 aa) initn: 3188 init1: 3188 opt: 3188 Z-score: 3742.2 bits: 702.3 E(): 9.8e-200 Smith-Waterman score: 3188; 100.000% identity (100.000% similar) in 496 aa overlap (1-496:166-661) 10 20 30 mKIAA0 EKRVKLMSDLQKLIQGKIKTIAFAHDSTRV :::::::::::::::::::::::::::::: gi|148 SRQLSDKTNYDIVVRAKHIWESLRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRV 140 150 160 170 180 190 40 50 60 70 80 90 mKIAA0 IQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHV 200 210 220 230 240 250 100 110 120 130 140 150 mKIAA0 RKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLELQPAKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLELQPAKL 260 270 280 290 300 310 160 170 180 190 200 210 mKIAA0 ELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVYLAHTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVYLAHTH 320 330 340 350 360 370 220 230 240 250 260 270 mKIAA0 DGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIII 380 390 400 410 420 430 280 290 300 310 320 330 mKIAA0 SEIISSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDTAIRRREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SEIISSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDTAIRRREL 440 450 460 470 480 490 340 350 360 370 380 390 mKIAA0 LESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAAELHPGGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAAELHPGGK 500 510 520 530 540 550 400 410 420 430 440 450 mKIAA0 DGELHVAEHPAGHLVLKWLLEQDKKMKESGKEGCFAKTLVERVGMKNLKSWASINRGAII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DGELHVAEHPAGHLVLKWLLEQDKKMKESGKEGCFAKTLVERVGMKNLKSWASINRGAII 560 570 580 590 600 610 460 470 480 490 mKIAA0 LSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA :::::::::::::::::::::::::::::::::::::::::::::: gi|148 LSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA 620 630 640 650 660 >>gi|148709703|gb|EDL41649.1| DNA segment, Chr 19, Brigh (665 aa) initn: 2860 init1: 2860 opt: 3168 Z-score: 3718.7 bits: 698.0 E(): 2e-198 Smith-Waterman score: 3168; 99.002% identity (99.002% similar) in 501 aa overlap (1-496:165-665) 10 20 30 mKIAA0 EKRVKLMSDLQKLIQGKIKTIAFAHDSTRV :::::::::::::::::::::::::::::: gi|148 SRQLSDKTNYDIVVRAKHIWESLRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRV 140 150 160 170 180 190 40 50 60 70 80 mKIAA0 IQCFIQYGNEEQRKQAFQELQG-----DLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRS :::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|148 IQCFIQYGNEEQRKQAFQELQGIVNSGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRS 200 210 220 230 240 250 90 100 110 120 130 140 mKIAA0 FKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLEL 260 270 280 290 300 310 150 160 170 180 190 200 mKIAA0 QPAKLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QPAKLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVY 320 330 340 350 360 370 210 220 230 240 250 260 mKIAA0 LAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLV 380 390 400 410 420 430 270 280 290 300 310 320 mKIAA0 KQIIISEIISSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDTAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KQIIISEIISSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDTAI 440 450 460 470 480 490 330 340 350 360 370 380 mKIAA0 RRRELLESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAAEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RRRELLESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAAEL 500 510 520 530 540 550 390 400 410 420 430 440 mKIAA0 HPGGKDGELHVAEHPAGHLVLKWLLEQDKKMKESGKEGCFAKTLVERVGMKNLKSWASIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HPGGKDGELHVAEHPAGHLVLKWLLEQDKKMKESGKEGCFAKTLVERVGMKNLKSWASIN 560 570 580 590 600 610 450 460 470 480 490 mKIAA0 RGAIILSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RGAIILSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA 620 630 640 650 660 >>gi|26353010|dbj|BAC40135.1| unnamed protein product [M (485 aa) initn: 3129 init1: 3059 opt: 3059 Z-score: 3592.6 bits: 674.2 E(): 2.1e-191 Smith-Waterman score: 3059; 98.747% identity (100.000% similar) in 479 aa overlap (7-485:1-479) 10 20 30 40 50 60 mKIAA0 EKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCFIQYGNEEQRKQAFQELQGDLVELSKA :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MSDLQKLIQGKIKTIAFAHDSTRVIQCFIQYGNEEQRKQAFQELQGDLVELSKA 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 KYSRNIVKKFLMYGSKPQVAEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KYSRNIVKKFLMYGSKPQVAEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLT 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 EELYGNTFQLYKSADHPTLDKVLELQPAKLELIMDEMKQILTPMAQKEAVIKHSLVHKVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EELYGNTFQLYKSADHPTLDKVLELQPAKLELIMDEMKQILTPMAQKEAVIKHSLVHKVF 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LDFFTYAPPKPRSELIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LDFFTYAPPKPRSELIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVE 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 KVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYGRKVLLYLMSPRDPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYGRKVLLYLMSPRDPA 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 HTVPELIELLQKGDGNAHSKKDTAIRRRELLESISPALLSYLQGHTQEVVLDKSACVLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 HTVPELIELLQKGDGNAHSKKDTAIRRRELLESISPALLSYLQGHTQEVVLDKSACVLVS 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 DMLGSATGDVQPAMDAIASLAAAELHPGGKDGELHVAEHPAGHLVLKWLLEQDKKMKESG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DMLGSATGDVQPAMDAIASLAAAELHPGGKDGELHVAEHPAGHLVLKWLLEQDKKMKESG 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 KEGCFAKTLVERVGMKNLKSWASINRGAIILSSLLQSCDQEVVNKVKGGLKPLIPTLEKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|263 KEGCFAKTLVERVGMKNLKSWASINRGAIILSSLLQSCDQEVVNKVKGGLKPLIPTLEKK 420 430 440 450 460 470 490 mKIAA0 KSSSRGIQTLLEKLTA ..... gi|263 QKQQQRHPDPA 480 >>gi|109511374|ref|XP_215276.4| PREDICTED: similar to D1 (647 aa) initn: 2978 init1: 2978 opt: 2978 Z-score: 3495.6 bits: 656.7 E(): 5.3e-186 Smith-Waterman score: 2978; 92.137% identity (98.387% similar) in 496 aa overlap (1-496:152-647) 10 20 30 mKIAA0 EKRVKLMSDLQKLIQGKIKTIAFAHDSTRV :::::::::::::::::::::::::::::: gi|109 NRQLSDKTNYDVVVRAKHIWESLRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRV 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA0 IQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHV :::.::::.::::: ::.::::::::::::::::::::::::::::::.::::::::::: gi|109 IQCLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGHV 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA0 RKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLELQPAKL :::::::::::::::::::::::::::::::::::::::::::::::::.::::.::.:: gi|109 RKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLEKVLEVQPGKL 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA0 ELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVYLAHTH :::.:::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|109 ELILDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSELIEAIREAVVYLAHTH 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA0 DGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIII :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|109 DGARVAMHCLWHGTPKDRKVIVKTMKTYVEKIANGQYSHLVLLAAFDCIDDTKLVKQIII 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA0 SEIISSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDTAIRRREL ::.::::::::::::::::::::.:::. :: :::.:.:::::::::::::::::::::: gi|109 SEVISSLPSIVNDKYGRKVLLYLLSPRNSAHLVPEIIQLLQKGDGNAHSKKDTAIRRREL 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA0 LESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAAELHPGGK ::::::::::::::::.:::::::.::::::.:::::::.::::::::.::: ::.:::: gi|109 LESISPALLSYLQGHTREVVLDKSVCVLVSDILGSATGDAQPAMDAIAGLAAEELYPGGK 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA0 DGELHVAEHPAGHLVLKWLLEQDKKMKESGKEGCFAKTLVERVGMKNLKSWASINRGAII :::::.:::::::::::::.:::::.::.:::::::::::: :.::::::::::::::. gi|109 DGELHIAEHPAGHLVLKWLIEQDKKIKENGKEGCFAKTLVECFGVKNLKSWASINRGAIV 550 560 570 580 590 600 460 470 480 490 mKIAA0 LSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA ::::::::::.::::::.::: :::::::.::.:.::::::::::: gi|109 LSSLLQSCDQDVVNKVKAGLKTLIPTLEKTKSTSKGIQTLLEKLTA 610 620 630 640 >>gi|109514142|ref|XP_001066994.1| PREDICTED: similar to (691 aa) initn: 2978 init1: 2978 opt: 2978 Z-score: 3495.2 bits: 656.7 E(): 5.6e-186 Smith-Waterman score: 2978; 92.137% identity (98.387% similar) in 496 aa overlap (1-496:196-691) 10 20 30 mKIAA0 EKRVKLMSDLQKLIQGKIKTIAFAHDSTRV :::::::::::::::::::::::::::::: gi|109 NRQLSDKTNYDVVVRAKHIWESLRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRV 170 180 190 200 210 220 40 50 60 70 80 90 mKIAA0 IQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHV :::.::::.::::: ::.::::::::::::::::::::::::::::::.::::::::::: gi|109 IQCLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGHV 230 240 250 260 270 280 100 110 120 130 140 150 mKIAA0 RKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLELQPAKL :::::::::::::::::::::::::::::::::::::::::::::::::.::::.::.:: gi|109 RKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLEKVLEVQPGKL 290 300 310 320 330 340 160 170 180 190 200 210 mKIAA0 ELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVYLAHTH :::.:::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|109 ELILDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSELIEAIREAVVYLAHTH 350 360 370 380 390 400 220 230 240 250 260 270 mKIAA0 DGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIII :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|109 DGARVAMHCLWHGTPKDRKVIVKTMKTYVEKIANGQYSHLVLLAAFDCIDDTKLVKQIII 410 420 430 440 450 460 280 290 300 310 320 330 mKIAA0 SEIISSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDTAIRRREL ::.::::::::::::::::::::.:::. :: :::.:.:::::::::::::::::::::: gi|109 SEVISSLPSIVNDKYGRKVLLYLLSPRNSAHLVPEIIQLLQKGDGNAHSKKDTAIRRREL 470 480 490 500 510 520 340 350 360 370 380 390 mKIAA0 LESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAAELHPGGK ::::::::::::::::.:::::::.::::::.:::::::.::::::::.::: ::.:::: gi|109 LESISPALLSYLQGHTREVVLDKSVCVLVSDILGSATGDAQPAMDAIAGLAAEELYPGGK 530 540 550 560 570 580 400 410 420 430 440 450 mKIAA0 DGELHVAEHPAGHLVLKWLLEQDKKMKESGKEGCFAKTLVERVGMKNLKSWASINRGAII :::::.:::::::::::::.:::::.::.:::::::::::: :.::::::::::::::. gi|109 DGELHIAEHPAGHLVLKWLIEQDKKIKENGKEGCFAKTLVECFGVKNLKSWASINRGAIV 590 600 610 620 630 640 460 470 480 490 mKIAA0 LSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA ::::::::::.::::::.::: :::::::.::.:.::::::::::: gi|109 LSSLLQSCDQDVVNKVKAGLKTLIPTLEKTKSTSKGIQTLLEKLTA 650 660 670 680 690 >>gi|189054927|dbj|BAG37911.1| unnamed protein product [ (508 aa) initn: 3065 init1: 2962 opt: 2962 Z-score: 3478.4 bits: 653.1 E(): 4.9e-185 Smith-Waterman score: 2962; 91.919% identity (97.980% similar) in 495 aa overlap (1-495:13-507) 10 20 30 40 mKIAA0 EKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCFIQYGNEEQRKQAFQ :::::::::::::::::::.:::::::::::::.:::::::::::::. gi|189 MWEILRRKDCDKEKRVKLMSDLQKLIQGKIKAIAFAHDSTRVIQCYIQYGNEEQRKQAFE 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 ELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHVRKMLRHSEASAIVEYAYN ::. ::::::::::::::::::::::::::.:::::::::::::::::.::::::::::: gi|189 ELRDDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGHVRKMLRHAEASAIVEYAYN 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 DKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLELQPAKLELIMDEMKQILTPMAQKE ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|189 DKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLELQPEKLELIMDEMKQILTPMAQKE 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 AVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDR :::::::::::::::::::::: :::.::::::::::::::::::::::::::::::::: gi|189 AVIKHSLVHKVFLDFFTYAPPKLRSEMIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDR 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 KVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYGRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 KVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYGRK 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 VLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDTAIRRRELLESISPALLSYLQGHTQE :::::.::::::::: :.::.:::::::::::::: .:::::::::::::::::: :.:: gi|189 VLLYLLSPRDPAHTVREIIEVLQKGDGNAHSKKDTEVRRRELLESISPALLSYLQEHAQE 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 VVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAAELHPGGKDGELHVAEHPAGHLVLKW :::::::::::::.::::::::::.:.:::::::. :::::::::::.:::::::::::: gi|189 VVLDKSACVLVSDILGSATGDVQPTMNAIASLAATGLHPGGKDGELHIAEHPAGHLVLKW 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 LLEQDKKMKESGKEGCFAKTLVERVGMKNLKSWASINRGAIILSSLLQSCDQEVVNKVKG :.::::::::.:.::::::::::.:::::::::::.::::::::::::::: ::.::::. gi|189 LIEQDKKMKENGREGCFAKTLVEHVGMKNLKSWASVNRGAIILSSLLQSCDLEVANKVKA 430 440 450 460 470 480 470 480 490 mKIAA0 GLKPLIPTLEKNKSSSRGIQTLLEKLTA .:: :::::::.::.:.::. :::::. gi|189 ALKSLIPTLEKTKSTSKGIEILLEKLST 490 500 >>gi|73946899|ref|XP_533539.2| PREDICTED: similar to D19 (720 aa) initn: 3068 init1: 2949 opt: 2949 Z-score: 3460.9 bits: 650.4 E(): 4.6e-184 Smith-Waterman score: 2949; 90.121% identity (98.185% similar) in 496 aa overlap (1-496:225-720) 10 20 30 mKIAA0 EKRVKLMSDLQKLIQGKIKTIAFAHDSTRV :::::::::::::::::::::::::::::: gi|739 SRQLSDKTNYDIVVRAKQIWETLRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRV 200 210 220 230 240 250 40 50 60 70 80 90 mKIAA0 IQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHV :::.:::::::::.:::.::. :.:.::::::::::::::::::::::.:::.::::::: gi|739 IQCYIQYGNEEQREQAFEELRDDFVQLSKAKYSRNIVKKFLMYGSKPQIAEIMRSFKGHV 260 270 280 290 300 310 100 110 120 130 140 150 mKIAA0 RKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLELQPAKL ::::::.::::::::::::::::::::::::::::::::::::::::::::::: :: :: gi|739 RKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLETQPEKL 320 330 340 350 360 370 160 170 180 190 200 210 mKIAA0 ELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVYLAHTH .::::::::::::::::::::::::::::::::::::::: :::.::::::::.:::::: gi|739 DLIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSEMIEAIREAVIYLAHTH 380 390 400 410 420 430 220 230 240 250 260 270 mKIAA0 DGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIII ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|739 DGARVAMHCLWHGTPKDRKVIVKTMKTYIEKVANGQYSHLVLLAAFDCIDDTKLVKQIII 440 450 460 470 480 490 280 290 300 310 320 330 mKIAA0 SEIISSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDTAIRRREL ::::.:::.::::::::::::::.::::::::: :.::.::::::::::::::::::::: gi|739 SEIINSLPNIVNDKYGRKVLLYLLSPRDPAHTVREIIEVLQKGDGNAHSKKDTAIRRREL 500 510 520 530 540 550 340 350 360 370 380 390 mKIAA0 LESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAAELHPGGK :::::::::::::::.:::::::::::::::.::.: :::::::::::::::.::::::: gi|739 LESISPALLSYLQGHAQEVVLDKSACVLVSDILGAAIGDVQPAMDAIASLAATELHPGGK 560 570 580 590 600 610 400 410 420 430 440 450 mKIAA0 DGELHVAEHPAGHLVLKWLLEQDKKMKESGKEGCFAKTLVERVGMKNLKSWASINRGAII :::::.:::::::::::::.:::.::::::.::::::::.:.:::::::::::.:::::. gi|739 DGELHIAEHPAGHLVLKWLIEQDEKMKESGREGCFAKTLIEHVGMKNLKSWASVNRGAIL 620 630 640 650 660 670 460 470 480 490 mKIAA0 LSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA ::::::: :.::..:.:.::: :::::::::..:.::. :::::.: gi|739 LSSLLQSSDHEVAHKIKAGLKGLIPTLEKNKNTSKGIEMLLEKLAA 680 690 700 710 720 >>gi|149062644|gb|EDM13067.1| rCG47785, isoform CRA_b [R (465 aa) initn: 2689 init1: 2689 opt: 2689 Z-score: 3158.2 bits: 593.8 E(): 3.3e-167 Smith-Waterman score: 2689; 92.170% identity (98.658% similar) in 447 aa overlap (50-496:19-465) 20 30 40 50 60 70 mKIAA0 TIAFAHDSTRVIQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQV ...::::::::::::::::::::::::::. gi|149 MGARSRGSGLSKNCKVLVISSDLVELSKAKYSRNIVKKFLMYGSKPQI 10 20 30 40 80 90 100 110 120 130 mKIAA0 AEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTL 50 60 70 80 90 100 140 150 160 170 180 190 mKIAA0 DKVLELQPAKLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAI .::::.::.:::::.:::::::::::::::::::::::::::::::::::: :::::::: gi|149 EKVLEVQPGKLELILDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSELIEAI 110 120 130 140 150 160 200 210 220 230 240 250 mKIAA0 REAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCI ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|149 REAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKIANGQYSHLVLLAAFDCI 170 180 190 200 210 220 260 270 280 290 300 310 mKIAA0 DDTKLVKQIIISEIISSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHS :::::::::::::.::::::::::::::::::::.::: ::: :::.:.::::::::::: gi|149 DDTKLVKQIIISEVISSLPSIVNDKYGRKVLLYLLSPRAPAHLVPEIIQLLQKGDGNAHS 230 240 250 260 270 280 320 330 340 350 360 370 mKIAA0 KKDTAIRRRELLESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIAS :::::::::::::::::::::::::::.:::::::.::::::.:::::::.::::::::. gi|149 KKDTAIRRRELLESISPALLSYLQGHTREVVLDKSVCVLVSDILGSATGDAQPAMDAIAG 290 300 310 320 330 340 380 390 400 410 420 430 mKIAA0 LAAAELHPGGKDGELHVAEHPAGHLVLKWLLEQDKKMKESGKEGCFAKTLVERVGMKNLK ::: ::.:::::::::.:::::::::::::.:::::.::.:::::::::::: ::::::: gi|149 LAAEELYPGGKDGELHIAEHPAGHLVLKWLIEQDKKIKENGKEGCFAKTLVECVGMKNLK 350 360 370 380 390 400 440 450 460 470 480 490 mKIAA0 SWASINRGAIILSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA ::::::::::.::::::::::.::::::.::: :::::::.::.:.::::::::::: gi|149 SWASINRGAIVLSSLLQSCDQDVVNKVKAGLKTLIPTLEKTKSTSKGIQTLLEKLTA 410 420 430 440 450 460 >>gi|149412872|ref|XP_001507108.1| PREDICTED: similar to (729 aa) initn: 2563 init1: 2520 opt: 2528 Z-score: 2966.3 bits: 558.9 E(): 1.6e-156 Smith-Waterman score: 2528; 81.092% identity (94.118% similar) in 476 aa overlap (1-476:84-557) 10 20 30 mKIAA0 EKRVKLMSDLQKLIQGKIKTIAFAHDSTRV :::.::::.::::..::::::::::::::: gi|149 SRQSNDKSGYDVVMKAKLIWESLRRKNCDREKRTKLMSELQKLLRGKIKTIAFAHDSTRV 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 IQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHV :::.:.:::..::..::.::. .:::::::::::::::::::::::::::::::::::.: gi|149 IQCYIRYGNDRQREEAFEELKENLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGQV 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 RKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLELQPAKL :.::::.::::::::::::::::::::::.:::::::::.:::: :::::::::.:::: gi|149 RRMLRHAEASAIVEYAYNDKAILEQRNMLVEELYGNTFQIYKSAVHPTLDKVLEVQPAKQ 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 ELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIREAVVYLAHTH : :::::::::::::::::::::::::::::::::.:: : :::.::::::::.:::::: gi|149 EAIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTHAPSKLRSEMIEAIREAVIYLAHTH 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA0 DGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIII :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|149 DGARVAMNCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQLII 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA0 SEIISSLPSIVNDKYGRKVLLYLMSPRDPAHTVPELIELLQKGDGNAHSKKDTAIRRREL :::.::::.:::.::::::: ::.:::::::.:::.:..::::: ::::::: ::::::: gi|149 SEIVSSLPDIVNNKYGRKVLSYLLSPRDPAHVVPEIIKVLQKGDENAHSKKDPAIRRREL 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA0 LESISPALLSYLQGHTQEVVLDKSACVLVSDMLGSATGDVQPAMDAIASLAAAELHPGGK ::.::::::::.: :..:.:.::..::::.:.:: :.: :::.:::.:.:::::: :::. gi|149 LEAISPALLSYVQEHARELVVDKGSCVLVADVLGRAVGGVQPVMDAVADLAAAELIPGGE 420 430 440 450 460 470 400 410 420 430 440 450 mKIAA0 DGELHVAEHPAGHLVLKWLLEQDKKMKESGKEGCFAKTLVERVGMKNLKSWASINRGAII :::::::::::::::::::.::: : .:.:.:::::.::.::::..::::::.::::::: gi|149 DGELHVAEHPAGHLVLKWLIEQDGKRRENGREGCFARTLIERVGVENLKSWAGINRGAII 480 490 500 510 520 530 460 470 480 490 mKIAA0 LSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA : .: : :. : .. .: :. gi|149 LC--WRSTDATVTVAVVSSGSPGSPSSVTVAFAVCRPLGPGLSLQALVRSGSADLHGPGV 540 550 560 570 580 590 496 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 12:37:55 2009 done: Thu Mar 12 12:44:57 2009 Total Scan time: 948.100 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]