# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mtj02754.fasta.nr -Q ../query/mKIAA1870.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1870, 857 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7879233 sequences Expectation_n fit: rho(ln(x))= 6.6247+/-0.00021; mu= 6.1721+/- 0.012 mean_var=158.8746+/-29.900, 0's: 32 Z-trim: 202 B-trim: 79 in 1/66 Lambda= 0.101753 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148699169|gb|EDL31116.1| procollagen, type XXVI (1845) 6358 946.6 0 gi|81871737|sp|Q5QNQ9.1|CORA1_MOUSE RecName: Full= (1845) 6358 946.6 0 gi|28204656|gb|AAN87341.2| collagen type XXVII pro (1845) 6358 946.6 0 gi|149059591|gb|EDM10529.1| procollagen, type XXVI (1836) 6151 916.2 0 gi|81912968|sp|Q80ZF0.1|CORA1_RAT RecName: Full=Co (1855) 6139 914.4 0 gi|74762504|sp|Q8IZC6.1|CORA1_HUMAN RecName: Full= (1860) 5747 856.9 0 gi|119607820|gb|EAW87414.1| collagen, type XXVII, (1860) 5687 848.1 0 gi|194669734|ref|XP_602219.4| PREDICTED: collagen, (1841) 5684 847.6 0 gi|114626342|ref|XP_520208.2| PREDICTED: collagen, (1767) 5565 830.1 0 gi|119607818|gb|EAW87412.1| collagen, type XXVII, ( 827) 5469 815.7 0 gi|224073359|ref|XP_002193897.1| PREDICTED: simila (1743) 4755 711.2 9.5e-202 gi|148699172|gb|EDL31119.1| procollagen, type XXVI ( 729) 4494 672.5 1.8e-190 gi|148699170|gb|EDL31117.1| procollagen, type XXVI (1641) 4479 670.7 1.4e-189 gi|149059592|gb|EDM10530.1| procollagen, type XXVI (1326) 4432 663.7 1.5e-187 gi|194225670|ref|XP_001916612.1| PREDICTED: simila (1763) 4336 649.7 3.1e-183 gi|109110493|ref|XP_001096937.1| PREDICTED: simila ( 643) 4166 624.3 5.2e-176 gi|109939862|gb|AAI18145.1| COL27A1 protein [Bos t ( 608) 4049 607.1 7.4e-171 gi|166218146|sp|A0MSJ1.1|CORA1_DANRE RecName: Full (1658) 3936 591.0 1.4e-165 gi|189534478|ref|XP_001343932.2| PREDICTED: simila (1167) 3547 533.7 1.8e-148 gi|224057501|ref|XP_002191828.1| PREDICTED: collag (1764) 3303 498.1 1.4e-137 gi|126306135|ref|XP_001365693.1| PREDICTED: simila (1705) 3299 497.5 2.1e-137 gi|119889929|ref|XP_609742.3| PREDICTED: similar t (1691) 3202 483.2 4e-133 gi|73960103|ref|XP_537089.2| PREDICTED: similar to (1714) 3181 480.1 3.4e-132 gi|194211149|ref|XP_001495021.2| PREDICTED: collag (1709) 3166 477.9 1.6e-131 gi|148699171|gb|EDL31118.1| procollagen, type XXVI ( 958) 3160 476.8 1.9e-131 gi|109009549|ref|XP_001109249.1| PREDICTED: simila (1714) 3156 476.5 4.3e-131 gi|121948873|sp|Q17RW2.1|COOA1_HUMAN RecName: Full (1714) 3154 476.2 5.3e-131 gi|32364065|gb|AAP80185.1| alpha 1 type XXIV colla (1714) 3154 476.2 5.3e-131 gi|55663530|emb|CAH71121.1| collagen, type XXIV, a (1714) 3154 476.2 5.3e-131 gi|109465657|ref|XP_575056.2| PREDICTED: similar t (1352) 3122 471.4 1.2e-129 gi|109467661|ref|XP_001077062.1| PREDICTED: simila (1731) 3122 471.5 1.4e-129 gi|123786282|sp|Q30D77.1|COOA1_MOUSE RecName: Full (1733) 3122 471.5 1.4e-129 gi|116326001|ref|NP_082046.2| procollagen, type XX (1733) 3118 470.9 2.1e-129 gi|118099233|ref|XP_415514.2| PREDICTED: similar t ( 698) 2317 352.9 2.8e-94 gi|119391837|emb|CAL18602.1| collagen XI alpha 1 c (1695) 2256 344.3 2.5e-91 gi|148725310|emb|CAK04962.2| collagen type XI alph (1877) 2256 344.4 2.7e-91 gi|24210303|emb|CAD54661.1| collagen type XI alpha (1349) 2251 343.5 3.6e-91 gi|10947027|gb|AAC62178.2| type IIA procollagen [C (1487) 2233 340.9 2.4e-90 gi|31340542|gb|AAO33039.2| alpha 1 type II procoll (1269) 2217 338.5 1.1e-89 gi|15546070|gb|AAK98621.1| alpha 1 type IIA collag (1420) 2216 338.4 1.3e-89 gi|164414427|ref|NP_001106695.1| collagen, type II (1418) 2213 337.9 1.8e-89 gi|164414425|ref|NP_001001135.2| collagen, type II (1487) 2213 338.0 1.8e-89 gi|1480744|gb|AAB05773.1| type II collagen [Equus (1418) 2212 337.8 2e-89 gi|126343243|ref|XP_001378056.1| PREDICTED: simila (1057) 2210 337.4 2e-89 gi|114582184|ref|XP_001163598.1| PREDICTED: simila (1457) 2209 337.4 2.7e-89 gi|109096335|ref|XP_001100278.1| PREDICTED: simila (1424) 2204 336.6 4.5e-89 gi|109096333|ref|XP_001100460.1| PREDICTED: simila (1493) 2204 336.7 4.6e-89 gi|109096331|ref|XP_001100559.1| PREDICTED: simila (1418) 2203 336.5 4.9e-89 gi|109096337|ref|XP_001100652.1| PREDICTED: simila (1455) 2203 336.5 5e-89 gi|109096329|ref|XP_001100739.1| PREDICTED: simila (1487) 2203 336.5 5.1e-89 >>gi|148699169|gb|EDL31116.1| procollagen, type XXVII, a (1845 aa) initn: 6358 init1: 6358 opt: 6358 Z-score: 5049.8 bits: 946.6 E(): 0 Smith-Waterman score: 6358; 100.000% identity (100.000% similar) in 857 aa overlap (1-857:989-1845) 10 20 30 mKIAA1 EPGIVGEKGDRGVMGPPGAPGPKGSMGHPG :::::::::::::::::::::::::::::: gi|148 LDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 960 970 980 990 1000 1010 40 50 60 70 80 90 mKIAA1 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1020 1030 1040 1050 1060 1070 100 110 120 130 140 150 mKIAA1 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG 1080 1090 1100 1110 1120 1130 160 170 180 190 200 210 mKIAA1 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG 1140 1150 1160 1170 1180 1190 220 230 240 250 260 270 mKIAA1 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG 1200 1210 1220 1230 1240 1250 280 290 300 310 320 330 mKIAA1 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQG 1260 1270 1280 1290 1300 1310 340 350 360 370 380 390 mKIAA1 EDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP 1320 1330 1340 1350 1360 1370 400 410 420 430 440 450 mKIAA1 GPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRP 1380 1390 1400 1410 1420 1430 460 470 480 490 500 510 mKIAA1 GYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT 1440 1450 1460 1470 1480 1490 520 530 540 550 560 570 mKIAA1 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII 1500 1510 1520 1530 1540 1550 580 590 600 610 620 630 mKIAA1 GPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAF 1560 1570 1580 1590 1600 1610 640 650 660 670 680 690 mKIAA1 QTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL 1620 1630 1640 1650 1660 1670 700 710 720 730 740 750 mKIAA1 MDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFLH 1680 1690 1700 1710 1720 1730 760 770 780 790 800 810 mKIAA1 LLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKV 1740 1750 1760 1770 1780 1790 820 830 840 850 mKIAA1 HDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL ::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL 1800 1810 1820 1830 1840 >>gi|81871737|sp|Q5QNQ9.1|CORA1_MOUSE RecName: Full=Coll (1845 aa) initn: 6358 init1: 6358 opt: 6358 Z-score: 5049.8 bits: 946.6 E(): 0 Smith-Waterman score: 6358; 100.000% identity (100.000% similar) in 857 aa overlap (1-857:989-1845) 10 20 30 mKIAA1 EPGIVGEKGDRGVMGPPGAPGPKGSMGHPG :::::::::::::::::::::::::::::: gi|818 LDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 960 970 980 990 1000 1010 40 50 60 70 80 90 mKIAA1 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1020 1030 1040 1050 1060 1070 100 110 120 130 140 150 mKIAA1 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG 1080 1090 1100 1110 1120 1130 160 170 180 190 200 210 mKIAA1 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG 1140 1150 1160 1170 1180 1190 220 230 240 250 260 270 mKIAA1 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG 1200 1210 1220 1230 1240 1250 280 290 300 310 320 330 mKIAA1 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQG 1260 1270 1280 1290 1300 1310 340 350 360 370 380 390 mKIAA1 EDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 EDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP 1320 1330 1340 1350 1360 1370 400 410 420 430 440 450 mKIAA1 GPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRP 1380 1390 1400 1410 1420 1430 460 470 480 490 500 510 mKIAA1 GYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT 1440 1450 1460 1470 1480 1490 520 530 540 550 560 570 mKIAA1 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII 1500 1510 1520 1530 1540 1550 580 590 600 610 620 630 mKIAA1 GPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAF 1560 1570 1580 1590 1600 1610 640 650 660 670 680 690 mKIAA1 QTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 QTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL 1620 1630 1640 1650 1660 1670 700 710 720 730 740 750 mKIAA1 MDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 MDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFLH 1680 1690 1700 1710 1720 1730 760 770 780 790 800 810 mKIAA1 LLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKV 1740 1750 1760 1770 1780 1790 820 830 840 850 mKIAA1 HDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL ::::::::::::::::::::::::::::::::::::::::::::::: gi|818 HDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL 1800 1810 1820 1830 1840 >>gi|28204656|gb|AAN87341.2| collagen type XXVII proalph (1845 aa) initn: 6358 init1: 6358 opt: 6358 Z-score: 5049.8 bits: 946.6 E(): 0 Smith-Waterman score: 6358; 100.000% identity (100.000% similar) in 857 aa overlap (1-857:989-1845) 10 20 30 mKIAA1 EPGIVGEKGDRGVMGPPGAPGPKGSMGHPG :::::::::::::::::::::::::::::: gi|282 LDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 960 970 980 990 1000 1010 40 50 60 70 80 90 mKIAA1 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1020 1030 1040 1050 1060 1070 100 110 120 130 140 150 mKIAA1 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG 1080 1090 1100 1110 1120 1130 160 170 180 190 200 210 mKIAA1 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG 1140 1150 1160 1170 1180 1190 220 230 240 250 260 270 mKIAA1 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG 1200 1210 1220 1230 1240 1250 280 290 300 310 320 330 mKIAA1 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQG 1260 1270 1280 1290 1300 1310 340 350 360 370 380 390 mKIAA1 EDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 EDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP 1320 1330 1340 1350 1360 1370 400 410 420 430 440 450 mKIAA1 GPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 GPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRP 1380 1390 1400 1410 1420 1430 460 470 480 490 500 510 mKIAA1 GYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 GYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT 1440 1450 1460 1470 1480 1490 520 530 540 550 560 570 mKIAA1 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII 1500 1510 1520 1530 1540 1550 580 590 600 610 620 630 mKIAA1 GPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 GPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAF 1560 1570 1580 1590 1600 1610 640 650 660 670 680 690 mKIAA1 QTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 QTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL 1620 1630 1640 1650 1660 1670 700 710 720 730 740 750 mKIAA1 MDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 MDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFLH 1680 1690 1700 1710 1720 1730 760 770 780 790 800 810 mKIAA1 LLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 LLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKV 1740 1750 1760 1770 1780 1790 820 830 840 850 mKIAA1 HDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL ::::::::::::::::::::::::::::::::::::::::::::::: gi|282 HDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL 1800 1810 1820 1830 1840 >>gi|149059591|gb|EDM10529.1| procollagen, type XXVII, a (1836 aa) initn: 6151 init1: 6151 opt: 6151 Z-score: 4885.6 bits: 916.2 E(): 0 Smith-Waterman score: 6151; 96.499% identity (98.250% similar) in 857 aa overlap (1-857:980-1836) 10 20 30 mKIAA1 EPGIVGEKGDRGVMGPPGAPGPKGSMGHPG :::::::::::::::::::::::::::::: gi|149 LDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 950 960 970 980 990 1000 40 50 60 70 80 90 mKIAA1 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG ::::.:.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1010 1020 1030 1040 1050 1060 100 110 120 130 140 150 mKIAA1 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG 1070 1080 1090 1100 1110 1120 160 170 180 190 200 210 mKIAA1 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|149 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDG 1130 1140 1150 1160 1170 1180 220 230 240 250 260 270 mKIAA1 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG :::::::::::::.: ::::::::: :::::::.::::::::::::::.:: :::::::: gi|149 EHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKGYQGQLGEMGIPG 1190 1200 1210 1220 1230 1240 280 290 300 310 320 330 mKIAA1 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQG .:::::::::::::::::: :::::::::::::::::::::::::::::::::::::.:: gi|149 DPGPPGTPGPKGSRGTLGPMGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGEQG 1250 1260 1270 1280 1290 1300 340 350 360 370 380 390 mKIAA1 EDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP ::::::: :::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|149 EDGKTEGAPGPPGERGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP 1310 1320 1330 1340 1350 1360 400 410 420 430 440 450 mKIAA1 GPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRP ::::::::::::::::::: :::::::::::::::::::::::::: ::.:: ::::::: gi|149 GPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDGNPGRDGRP 1370 1380 1390 1400 1410 1420 460 470 480 490 500 510 mKIAA1 GYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT 1430 1440 1450 1460 1470 1480 520 530 540 550 560 570 mKIAA1 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII 1490 1500 1510 1520 1530 1540 580 590 600 610 620 630 mKIAA1 GPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAF ::::::::::::::::::::::: ::::::::::::::::::::::::.::::::: ::: gi|149 GPPGMLGPSGLPGPKGDRGSRGDWGLQGPRGPPGPRGRPGPPGPPWHPVQFQQDDLEAAF 1550 1560 1570 1580 1590 1600 640 650 660 670 680 690 mKIAA1 QTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL ::::::.:::: ::::::::: :::::::::::::::::::::::::::::::::::::: gi|149 QTWMDAHGAVRLEGYSYPDQLMLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL 1610 1620 1630 1640 1650 1660 700 710 720 730 740 750 mKIAA1 MDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFLH :::::.:::: :::::::::::::::::::::.::::::::::::::::::::::::::: gi|149 MDCEQKMADGIYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKAEFAVSRVQMNFLH 1670 1680 1690 1700 1710 1720 760 770 780 790 800 810 mKIAA1 LLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKV ::::::::::::::::::::::::.: ::::::::::::::::::::::::::::::::: gi|149 LLSSEGTQHITIHCLNMTVWQEGPARPSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKV 1730 1740 1750 1760 1770 1780 820 830 840 850 mKIAA1 HDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL ::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL 1790 1800 1810 1820 1830 >>gi|81912968|sp|Q80ZF0.1|CORA1_RAT RecName: Full=Collag (1855 aa) initn: 7705 init1: 4690 opt: 6139 Z-score: 4876.0 bits: 914.4 E(): 0 Smith-Waterman score: 6139; 96.387% identity (98.135% similar) in 858 aa overlap (1-857:998-1855) 10 20 30 mKIAA1 EPGIVGEKGDRGVMGPPGAPGPKGSMGHPG :::::::::::::::::::::::::::::: gi|819 LDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 970 980 990 1000 1010 1020 40 50 60 70 80 90 mKIAA1 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG ::::.:.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 TPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1030 1040 1050 1060 1070 1080 100 110 120 130 140 150 mKIAA1 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG 1090 1100 1110 1120 1130 1140 160 170 180 190 200 210 mKIAA1 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|819 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDG 1150 1160 1170 1180 1190 1200 220 230 240 250 260 270 mKIAA1 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG :::::::::::::.: ::::::::: :::::::.::::::::::::::.:: :::::::: gi|819 EHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKGYQGQLGEMGIPG 1210 1220 1230 1240 1250 1260 280 290 300 310 320 330 mKIAA1 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQG .:::::::::::::::::: :::::::::::::::::::::::::::::::::::::.:: gi|819 DPGPPGTPGPKGSRGTLGPMGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGEQG 1270 1280 1290 1300 1310 1320 340 350 360 370 380 390 mKIAA1 EDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP ::::::: :::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|819 EDGKTEGAPGPPGERGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP 1330 1340 1350 1360 1370 1380 400 410 420 430 440 450 mKIAA1 GPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRP ::::::::::::::::::: :::::::::::::::::::::::::: ::.:: ::::::: gi|819 GPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDGNPGRDGRP 1390 1400 1410 1420 1430 1440 460 470 480 490 500 510 mKIAA1 GYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT 1450 1460 1470 1480 1490 1500 520 530 540 550 560 570 mKIAA1 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII 1510 1520 1530 1540 1550 1560 580 590 600 610 620 630 mKIAA1 GPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAF ::::::::::::::::::::::: ::::::::::::::::::::::::.::::::: ::: gi|819 GPPGMLGPSGLPGPKGDRGSRGDWGLQGPRGPPGPRGRPGPPGPPWHPVQFQQDDLEAAF 1570 1580 1590 1600 1610 1620 640 650 660 670 680 mKIAA1 QTWMDAQGAVRSE-GYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRD ::::::.:::: : :::::::: ::::::::::::::::::::::::::::::::::::: gi|819 QTWMDAHGAVRLEQGYSYPDQLMLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRD 1630 1640 1650 1660 1670 1680 690 700 710 720 730 740 mKIAA1 LMDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFL ::::::.:::: :::::::::::::::::::::.:::::::::::::::::::::::::: gi|819 LMDCEQKMADGIYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKAEFAVSRVQMNFL 1690 1700 1710 1720 1730 1740 750 760 770 780 790 800 mKIAA1 HLLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCK :::::::::::::::::::::::::.: :::::::::::::::::::::::::::::::: gi|819 HLLSSEGTQHITIHCLNMTVWQEGPARPSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCK 1750 1760 1770 1780 1790 1800 810 820 830 840 850 mKIAA1 VHDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL :::::::::::::::::::::::::::::::::::::::::::::::: gi|819 VHDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL 1810 1820 1830 1840 1850 >>gi|74762504|sp|Q8IZC6.1|CORA1_HUMAN RecName: Full=Coll (1860 aa) initn: 5747 init1: 5747 opt: 5747 Z-score: 4565.0 bits: 856.9 E(): 0 Smith-Waterman score: 5747; 89.148% identity (95.799% similar) in 857 aa overlap (1-857:1004-1860) 10 20 30 mKIAA1 EPGIVGEKGDRGVMGPPGAPGPKGSMGHPG ::::::::::::.:::::.::::::::::: gi|747 LDGVKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKGDRGMMGPPGVPGPKGSMGHPG 980 990 1000 1010 1020 1030 40 50 60 70 80 90 mKIAA1 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG :::.:.:::::: ::::::: ::::::::.:::::::::::::::.:::: ::.:::: gi|747 MPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGRPG 1040 1050 1060 1070 1080 1090 100 110 120 130 140 150 mKIAA1 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG .:::::.:::::: :..:: ::::::::::.:::::::: ::::::.::::::::::::: gi|747 RPGQQGVAGERGHLGSRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPG 1100 1110 1120 1130 1140 1150 160 170 180 190 200 210 mKIAA1 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG :::::::::..:::::::::: :::::::::::::::::: ::.:::::::::::::::: gi|747 AVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDG 1160 1170 1180 1190 1200 1210 220 230 240 250 260 270 mKIAA1 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG :::::::::: :::: :::::.::: : ::: :::::::. :::::::.:: :::::.:: gi|747 EHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPG 1220 1230 1240 1250 1260 1270 280 290 300 310 320 330 mKIAA1 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQG .::::::::::::::.:::::::::::::::::::::.:::::.:::::::::::::.:: gi|747 DPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQG 1280 1290 1300 1310 1320 1330 340 350 360 370 380 390 mKIAA1 EDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP ::::.::::::::::::::::::::::::::::::::::::::.:::::::::::::: : gi|747 EDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWP 1340 1350 1360 1370 1380 1390 400 410 420 430 440 450 mKIAA1 GPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRP ::::::: :::::: :::: ::::.::::::::::::::::: :: :: ::.:::::. gi|747 GPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQA 1400 1410 1420 1430 1440 1450 460 470 480 490 500 510 mKIAA1 GYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT : ::.::.::::::.::::.:::::::::::::::::::::::::::::::::::::: : gi|747 GQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRT 1460 1470 1480 1490 1500 1510 520 530 540 550 560 570 mKIAA1 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::. gi|747 GLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIV 1520 1530 1540 1550 1560 1570 580 590 600 610 620 630 mKIAA1 GPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAF :: :.::::::::::::.::::: ::::::::::::::::::::: :::.::::::::: gi|747 GPLGILGPSGLPGPKGDKGSRGDWGLQGPRGPPGPRGRPGPPGPPGGPIQLQQDDLGAAF 1580 1590 1600 1610 1620 1630 640 650 660 670 680 690 mKIAA1 QTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL :::::..::.: :.:::::.:.:::::::::::::::::::::::::::::::::::::: gi|747 QTWMDTSGALRPESYSYPDRLVLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL 1640 1650 1660 1670 1680 1690 700 710 720 730 740 750 mKIAA1 MDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFLH :::::.:.::::::::::::::::::::::::.:::::::::::::.:::.::::::::: gi|747 MDCEQKMVDGTYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKVEFAISRVQMNFLH 1700 1710 1720 1730 1740 1750 760 770 780 790 800 810 mKIAA1 LLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKV ::::: ::::::::::::::::: :.. :.:::::::::::.:::::::::::::::::: gi|747 LLSSEVTQHITIHCLNMTVWQEGTGQTPAKQAVRFRAWNGQIFEAGGQFRPEVSMDGCKV 1760 1770 1780 1790 1800 1810 820 830 840 850 mKIAA1 HDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL .:::::::::::::::::::::.:::::::.:::::::::::::::: gi|747 QDGRWHQTLFTFRTQDPQQLPIISVDNLPPASSGKQYRLEVGPACFL 1820 1830 1840 1850 1860 >>gi|119607820|gb|EAW87414.1| collagen, type XXVII, alph (1860 aa) initn: 5686 init1: 5686 opt: 5687 Z-score: 4517.4 bits: 848.1 E(): 0 Smith-Waterman score: 5687; 88.475% identity (95.111% similar) in 859 aa overlap (1-857:1004-1860) 10 20 30 mKIAA1 EPGIVGEKGDRGVMGPPGAPGPKGSMGHPG ::::::::::::.:::::.::::::::::: gi|119 LDGVKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKGDRGMMGPPGVPGPKGSMGHPG 980 990 1000 1010 1020 1030 40 50 60 70 80 90 mKIAA1 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG :::.:.:::::: ::::::: ::::::::.:::::::::::::::.:::: ::.:::: gi|119 MPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGRPG 1040 1050 1060 1070 1080 1090 100 110 120 130 140 150 mKIAA1 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG .:::::.:::::: :..:: ::::::::::.:::::::: ::::::.::::::::::::: gi|119 RPGQQGVAGERGHLGSRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPG 1100 1110 1120 1130 1140 1150 160 170 180 190 200 210 mKIAA1 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG :::::::::..:::::::::: :::::::::::::::::: ::.:::::::::::::::: gi|119 AVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDG 1160 1170 1180 1190 1200 1210 220 230 240 250 260 270 mKIAA1 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG :::::::::: :::: :::::.::: : ::: :::::::. :::::::.:: :::::.:: gi|119 EHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPG 1220 1230 1240 1250 1260 1270 280 290 300 310 320 330 mKIAA1 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQG .::::::::::::::.:::::::::::::::::::::.:::::.:::::::::::::.:: gi|119 DPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQG 1280 1290 1300 1310 1320 1330 340 350 360 370 380 390 mKIAA1 EDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP ::::.::::::::::::::::::::::::::::::::::::::.:::::::::::::: : gi|119 EDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWP 1340 1350 1360 1370 1380 1390 400 410 420 430 440 450 mKIAA1 GPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRP ::::::: :::::: :::: ::::.::::::::::::::::: :: :: ::.:::::. gi|119 GPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQA 1400 1410 1420 1430 1440 1450 460 470 480 490 500 510 mKIAA1 GYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT : ::.::.::::::.::::.:::::::::::::::::::::::::::::::::::::: : gi|119 GQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRT 1460 1470 1480 1490 1500 1510 520 530 540 550 560 570 mKIAA1 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::. gi|119 GLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIV 1520 1530 1540 1550 1560 1570 580 590 600 610 620 mKIAA1 GPPGMLGPSGLPGPKGDRGSRGDL--GLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGA :: :.::::::::::::.::::: : : ::::::::::::::: :::.::::::: gi|119 GPLGILGPSGLPGPKGDKGSRGDWVSGWAG--GPPGPRGRPGPPGPPGGPIQLQQDDLGA 1580 1590 1600 1610 1620 1630 630 640 650 660 670 680 mKIAA1 AFQTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCR :::::::..::.: :.:::::.:.:::::::::::::::::::::::::::::::::::: gi|119 AFQTWMDTSGALRPESYSYPDRLVLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCR 1640 1650 1660 1670 1680 1690 690 700 710 720 730 740 mKIAA1 DLMDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNF :::::::.:.::::::::::::::::::::::::.:::::::::::::.:::.::::::: gi|119 DLMDCEQKMVDGTYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKVEFAISRVQMNF 1700 1710 1720 1730 1740 1750 750 760 770 780 790 800 mKIAA1 LHLLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGC ::::::: ::::::::::::::::: :.. :.:::::::::::.:::::::::::::::: gi|119 LHLLSSEVTQHITIHCLNMTVWQEGTGQTPAKQAVRFRAWNGQIFEAGGQFRPEVSMDGC 1760 1770 1780 1790 1800 1810 810 820 830 840 850 mKIAA1 KVHDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL ::.:::::::::::::::::::::.:::::::.:::::::::::::::: gi|119 KVQDGRWHQTLFTFRTQDPQQLPIISVDNLPPASSGKQYRLEVGPACFL 1820 1830 1840 1850 1860 >>gi|194669734|ref|XP_602219.4| PREDICTED: collagen, typ (1841 aa) initn: 5684 init1: 5684 opt: 5684 Z-score: 4515.1 bits: 847.6 E(): 0 Smith-Waterman score: 5684; 88.331% identity (95.449% similar) in 857 aa overlap (1-857:985-1841) 10 20 30 mKIAA1 EPGIVGEKGDRGVMGPPGAPGPKGSMGHPG ::::.:::::::.::::::::::::::::: gi|194 PDGLKGEPGDAGRPGPVGEQGLLGFVGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPG 960 970 980 990 1000 1010 40 50 60 70 80 90 mKIAA1 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG :: .:::::::: ::::::: ::::::::.:::::::::::::::::::: ::.:: : gi|194 IPGVVGNPGEPGPPGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSKGLKGPPGPQGRLG 1020 1030 1040 1050 1060 1070 100 110 120 130 140 150 mKIAA1 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG ::::::.:::::: :..:: :. :::::::::::::::: ::::::.::::::::::::: gi|194 QPGQQGVAGERGHLGTRGFPGLRGPSGPPGAKGLPGEPGPQGPQGPIGPPGEMGPKGPPG 1080 1090 1100 1110 1120 1130 160 170 180 190 200 210 mKIAA1 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG :.:: ::::..:::::::::: :::::::::::::::::: ::.:::::::::::::::: gi|194 ALGELGLPGEAGMKGDLGPLGIPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDG 1140 1150 1160 1170 1180 1190 220 230 240 250 260 270 mKIAA1 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG :.::::::::::::: ::::::::. : :::::::::::. :::::::.:: :::::.:: gi|194 ERGEKGQEGLKGEDGPPGPPGITGIRGPEGKPGKQGEKGRTGAKGAKGYQGQLGEMGVPG 1200 1210 1220 1230 1240 1250 280 290 300 310 320 330 mKIAA1 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQG .::::::::::::::.:::::::::::::::::::::.::::: :::::::::::::.:: gi|194 DPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKGEQG 1260 1270 1280 1290 1300 1310 340 350 360 370 380 390 mKIAA1 EDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRP ::::.::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|194 EDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGNPGQQGQPGHPGPRGRP 1320 1330 1340 1350 1360 1370 400 410 420 430 440 450 mKIAA1 GPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRP :::::::::::::: :::: :::: ::::::::::::::::::::.:: ::.:::::. gi|194 GPKGSKGEEGPKGKQGKAGAPGRRGIQGLQGLPGPRGVVGRQGPEGVAGPDGLPGRDGQA 1380 1390 1400 1410 1420 1430 460 470 480 490 500 510 mKIAA1 GYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT : ::.::.::::::.::::.::.::::::::::::::::::::::::.::::::::::: gi|194 GQQGEQGDDGDPGPMGPAGKRGDPGVAGLPGAQGPPGFKGESGLPGQMGPPGKRGTEGGM 1440 1450 1460 1470 1480 1490 520 530 540 550 560 570 mKIAA1 GLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII :::::::::::::::::::::::::.::::::::: ::.::::::::::::::::::::: gi|194 GLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPQGDVGFKGIQGPRGPPGLMGKEGII 1500 1510 1520 1530 1540 1550 580 590 600 610 620 630 mKIAA1 GPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAF :: :.::::: :::::.:::::::::::::::::::.::::::: :.:::::::::: gi|194 GPLGILGPSGRQGPKGDKGSRGDLGLQGPRGPPGPRGQPGPPGPPGSTIHFQQDDLGAAF 1560 1570 1580 1590 1600 1610 640 650 660 670 680 690 mKIAA1 QTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL :::::..::.:.::::.::.:.:::::::::::::::::::::::::::::::::::::: gi|194 QTWMDTSGALRAEGYSHPDRLVLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL 1620 1630 1640 1650 1660 1670 700 710 720 730 740 750 mKIAA1 MDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFLH :::::.:.::::::::::::::::::::::::.:::::::::::::.:::.::::::::: gi|194 MDCEQKMVDGTYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKVEFAISRVQMNFLH 1680 1690 1700 1710 1720 1730 760 770 780 790 800 810 mKIAA1 LLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKV ::::: ::.:::::::::::::: :.. :.:::::::::::.::::::: :::::::::. gi|194 LLSSEVTQQITIHCLNMTVWQEGTGQTPAKQAVRFRAWNGQIFEAGGQFSPEVSMDGCKI 1740 1750 1760 1770 1780 1790 820 830 840 850 mKIAA1 HDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL .::::::::::::::::::::::.::::::.:::::::::::::::: gi|194 QDGRWHQTLFTFRTQDPQQLPIVGVDNLPPASSGKQYRLEVGPACFL 1800 1810 1820 1830 1840 >>gi|114626342|ref|XP_520208.2| PREDICTED: collagen, typ (1767 aa) initn: 6347 init1: 3606 opt: 5565 Z-score: 4420.9 bits: 830.1 E(): 0 Smith-Waterman score: 5565; 86.830% identity (94.056% similar) in 858 aa overlap (1-857:910-1767) 10 20 30 mKIAA1 EPGIVGEKGDRGVMGPPGAPGPKGSMGHPG ::::::::::::.:::::.::::::::::: gi|114 LDGVKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKGDRGMMGPPGVPGPKGSMGHPG 880 890 900 910 920 930 40 50 60 70 80 90 mKIAA1 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG :::.:.:::::: ::::::: ::::::::.::: ::. : .::.. : ::.:::: gi|114 MPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRRGPSGPERRWGFSGSHSKPGPPGPQGRPG 940 950 960 970 980 990 100 110 120 130 140 150 mKIAA1 QPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPG .:::::.:::::: :..:: ::::::::::.:::::::: :::::::::::::::::::: gi|114 RPGQQGVAGERGHLGSRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPVGPPGEMGPKGPPG 1000 1010 1020 1030 1040 1050 160 170 180 190 200 210 mKIAA1 AVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDG :::::::::..:::::::::: :::::::::::::::::: ::.:::::::::::::::: gi|114 AVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDG 1060 1070 1080 1090 1100 1110 220 230 240 250 260 270 mKIAA1 EHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPG :::::::::: :::: :::::.::: : ::: :::::::. :::::::.:: :::::.:: gi|114 EHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPG 1120 1130 1140 1150 1160 1170 280 290 300 310 320 mKIAA1 EPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGI-TGPLGPPGPKGEKGDQ .::::::::::::::.:::::.:::::::::::::::. . :. : :.: ::: :.: gi|114 DPGPPGTPGPKGSRGSLGPTGVPGRMGAQGEPGLAGYDLKGGVYTCPVGGPGPGVAMGEQ 1180 1190 1200 1210 1220 1230 330 340 350 360 370 380 mKIAA1 GEDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGR :::::.::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|114 GEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGR 1240 1250 1260 1270 1280 1290 390 400 410 420 430 440 mKIAA1 PGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGR :::::::: :::::: :::: ::::.::::::::::::::::: :: :: ::.:::::. gi|114 PGPKGSKGSEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQ 1300 1310 1320 1330 1340 1350 450 460 470 480 490 500 mKIAA1 PGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGG : ::.::.::::::.::::.:::::::::::::::::::::::::::::::::::::: gi|114 AGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGR 1360 1370 1380 1390 1400 1410 510 520 530 540 550 560 mKIAA1 TGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGI ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|114 TGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGI 1420 1430 1440 1450 1460 1470 570 580 590 600 610 620 mKIAA1 IGPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAA .:: :.::::::::::::.::::: ::::::::::::::::::::: :::.:::::::: gi|114 VGPLGILGPSGLPGPKGDKGSRGDWGLQGPRGPPGPRGRPGPPGPPGGPIQLQQDDLGAA 1480 1490 1500 1510 1520 1530 630 640 650 660 670 680 mKIAA1 FQTWMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRD ::::::..::.: :.:::::.:.::::::::::::::::::::::::::::::::::::: gi|114 FQTWMDTSGALRPESYSYPDRLVLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRD 1540 1550 1560 1570 1580 1590 690 700 710 720 730 740 mKIAA1 LMDCEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFL ::::::.:.::::::::::::::::::::::::.:::::::::::::.:::.:::::::: gi|114 LMDCEQKMVDGTYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKVEFAISRVQMNFL 1600 1610 1620 1630 1640 1650 750 760 770 780 790 800 mKIAA1 HLLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCK :::::: ::::::::::::::::: :.. :.:::::::::::.::::::::::::::::: gi|114 HLLSSEVTQHITIHCLNMTVWQEGTGQTPAKQAVRFRAWNGQIFEAGGQFRPEVSMDGCK 1660 1670 1680 1690 1700 1710 810 820 830 840 850 mKIAA1 VHDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL :.:::::::::::::::::::::.:::::::.:::::::::::::::: gi|114 VQDGRWHQTLFTFRTQDPQQLPIISVDNLPPASSGKQYRLEVGPACFL 1720 1730 1740 1750 1760 >>gi|119607818|gb|EAW87412.1| collagen, type XXVII, alph (827 aa) initn: 5468 init1: 5468 opt: 5469 Z-score: 4348.7 bits: 815.7 E(): 0 Smith-Waterman score: 5469; 88.406% identity (95.048% similar) in 828 aa overlap (32-857:2-827) 10 20 30 40 50 60 mKIAA1 PGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGIGNPGEPGPWGPPGSRGLPGMRGAKGH :::.:.:::::: ::::::: ::::::::. gi|119 MPGGMGTPGEPGPQGPPGSRGPPGMRGAKGR 10 20 30 70 80 90 100 110 120 mKIAA1 RGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGA :::::::::::::::.:::: ::.::::.:::::.:::::: :..:: ::::::::::. gi|119 RGPRGPDGPAGEQGSRGLKGPPGPQGRPGRPGQQGVAGERGHLGSRGFPGIPGPSGPPGT 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 KGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQ :::::::: ::::::.::::::::::::::::::::::..:::::::::: ::::::::: gi|119 KGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQ 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 RGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGK ::::::::: ::.:::::::::::::::::::::::::: :::: :::::.::: : ::: gi|119 RGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGK 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 PGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGE :::::::. :::::::.:: :::::.::.::::::::::::::.::::::::::::::: gi|119 SGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGE 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 PGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEPGDPG ::::::.:::::.:::::::::::::.::::::.:::::::::::::::::::::::::: gi|119 PGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPG 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 YPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQG ::::::::::::.:::::::::::::: :::::::: :::::: :::: ::::.::::: gi|119 YPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQG 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 LPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPG :::::::::::: :: :: ::.:::::. : ::.::.::::::.::::.::::::::::: gi|119 LPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPG 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 AQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFG ::::::::::::::::::::::::::: ::::::::::::::::::::::::::.::::: gi|119 AQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFG 460 470 480 490 500 510 550 560 570 580 590 mKIAA1 PKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDL--GLQGP ::::::::::::::::::::::::::::.:: :.::::::::::::.::::: : : gi|119 PKGPPGDIGFKGIQGPRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWVSGWAG- 520 530 540 550 560 570 600 610 620 630 640 650 mKIAA1 RGPPGPRGRPGPPGPPWHPIQFQQDDLGAAFQTWMDAQGAVRSEGYSYPDQLALDQGGEI ::::::::::::::: :::.::::::::::::::..::.: :.:::::.:.::::::: gi|119 -GPPGPRGRPGPPGPPGGPIQLQQDDLGAAFQTWMDTSGALRPESYSYPDRLVLDQGGEI 580 590 600 610 620 660 670 680 690 700 710 mKIAA1 FKTLHYLSNLIQSIKTPLGTKENPARVCRDLMDCEQRMADGTYWVDPNLGCSSDTIEVSC ::::::::::::::::::::::::::::::::::::.:.::::::::::::::::::::: gi|119 FKTLHYLSNLIQSIKTPLGTKENPARVCRDLMDCEQKMVDGTYWVDPNLGCSSDTIEVSC 630 640 650 660 670 680 720 730 740 750 760 770 mKIAA1 NFTQGGQTCLKPITASKAEFAVSRVQMNFLHLLSSEGTQHITIHCLNMTVWQEGPGRSSA :::.:::::::::::::.:::.:::::::::::::: ::::::::::::::::: :.. : gi|119 NFTHGGQTCLKPITASKVEFAISRVQMNFLHLLSSEVTQHITIHCLNMTVWQEGTGQTPA 690 700 710 720 730 740 780 790 800 810 820 830 mKIAA1 RQAVRFRAWNGQVFEAGGQFRPEVSMDGCKVHDGRWHQTLFTFRTQDPQQLPIVSVDNLP .:::::::::::.::::::::::::::::::.:::::::::::::::::::::.:::::: gi|119 KQAVRFRAWNGQIFEAGGQFRPEVSMDGCKVQDGRWHQTLFTFRTQDPQQLPIISVDNLP 750 760 770 780 790 800 840 850 mKIAA1 PVSSGKQYRLEVGPACFL :.:::::::::::::::: gi|119 PASSGKQYRLEVGPACFL 810 820 857 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 05:28:05 2009 done: Mon Mar 16 05:36:38 2009 Total Scan time: 1122.030 Total Display time: 0.570 Function used was FASTA [version 34.26.5 April 26, 2007]