# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mtj02475.fasta.nr -Q ../query/mFLJ00268.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00268, 241 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919332 sequences Expectation_n fit: rho(ln(x))= 4.7067+/-0.000182; mu= 10.6497+/- 0.010 mean_var=64.9105+/-12.599, 0's: 38 Z-trim: 48 B-trim: 13 in 1/63 Lambda= 0.159190 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|60360288|dbj|BAD90388.1| mFLJ00268 protein [Mus ( 241) 1708 400.5 1.2e-109 gi|157041472|gb|ABV01370.1| SCART2 splice variant ( 996) 1475 347.6 4.5e-93 gi|157041470|gb|ABV01369.1| SCART2 splice variant (1112) 1475 347.6 4.9e-93 gi|149061487|gb|EDM11910.1| rCG47791, isoform CRA_ ( 995) 1177 279.1 1.8e-72 gi|149061488|gb|EDM11911.1| rCG47791, isoform CRA_ ( 997) 1177 279.1 1.8e-72 gi|27464818|gb|AAO16207.1| scavenger receptor cyst ( 989) 1142 271.1 4.7e-70 gi|148685977|gb|EDL17924.1| RIKEN cDNA E430002D04, ( 991) 1142 271.1 4.7e-70 gi|26352924|dbj|BAC40092.1| unnamed protein produc ( 991) 1131 268.5 2.7e-69 gi|109091047|ref|XP_001093501.1| PREDICTED: simila ( 647) 1085 257.8 3e-66 gi|47077659|dbj|BAD18710.1| FLJ00268 protein [Homo ( 695) 1074 255.3 1.8e-65 gi|119581756|gb|EAW61352.1| hCG2040574 [Homo sapie ( 797) 1067 253.8 6.2e-65 gi|114633493|ref|XP_521667.2| PREDICTED: similar t ( 569) 1060 252.0 1.5e-64 gi|194687050|ref|XP_597136.4| PREDICTED: similar t (1077) 1063 253.0 1.5e-64 gi|194041727|ref|XP_001926649.1| PREDICTED: simila (1366) 1062 252.8 2.1e-64 gi|73999076|ref|XP_548815.2| PREDICTED: similar to ( 987) 1033 246.0 1.6e-62 gi|149435799|ref|XP_001520698.1| PREDICTED: simila ( 848) 857 205.6 2.1e-50 gi|126272396|ref|XP_001378311.1| PREDICTED: simila ( 975) 849 203.8 8.5e-50 gi|149639337|ref|XP_001510988.1| PREDICTED: simila ( 944) 830 199.4 1.7e-48 gi|118117307|ref|XP_424583.2| PREDICTED: hypotheti ( 324) 809 194.2 2.2e-47 gi|118129472|ref|XP_001236992.1| PREDICTED: simila ( 423) 807 193.8 3.6e-47 gi|118116578|ref|XP_423001.2| PREDICTED: similar t ( 701) 805 193.5 7.3e-47 gi|118117759|ref|XP_427519.2| PREDICTED: similar t ( 807) 799 192.2 2.1e-46 gi|118105235|ref|XP_001233319.1| PREDICTED: hypoth ( 446) 791 190.2 4.8e-46 gi|118093365|ref|XP_426557.2| PREDICTED: similar t ( 997) 758 182.9 1.7e-43 gi|149569835|ref|XP_001513768.1| PREDICTED: simila ( 329) 740 178.3 1.3e-42 gi|118117761|ref|XP_001233355.1| PREDICTED: simila ( 756) 742 179.1 1.7e-42 gi|26333865|dbj|BAC30650.1| unnamed protein produc ( 446) 739 178.2 1.9e-42 gi|118083365|ref|XP_416526.2| PREDICTED: similar t ( 922) 741 178.9 2.4e-42 gi|118126215|ref|XP_428102.2| PREDICTED: similar t ( 354) 711 171.7 1.4e-40 gi|149061491|gb|EDM11914.1| rCG48232, isoform CRA_ ( 446) 697 168.6 1.5e-39 gi|224043813|ref|XP_002192002.1| PREDICTED: simila ( 946) 682 165.4 2.9e-38 gi|118129750|ref|XP_428825.2| PREDICTED: similar t ( 498) 674 163.3 6.4e-38 gi|118091397|ref|XP_001231884.1| PREDICTED: simila ( 608) 662 160.7 5e-37 gi|118129740|ref|XP_424435.2| PREDICTED: hypotheti ( 597) 659 160.0 8e-37 gi|119569693|gb|EAW49308.1| deleted in malignant b (1049) 654 159.0 2.7e-36 gi|169218264|ref|XP_001718988.1| PREDICTED: simila ( 396) 647 157.1 4e-36 gi|118091395|ref|XP_421057.2| PREDICTED: similar t ( 946) 651 158.3 4e-36 gi|118091393|ref|XP_421058.2| PREDICTED: similar t ( 779) 646 157.1 7.8e-36 gi|5912464|emb|CAB56155.1| DMBT1/8kb.2 protein [Ho (2412) 648 157.9 1.3e-35 gi|14715231|emb|CAC44122.1| DMBT1/8kb.2 protein [H (2413) 648 157.9 1.3e-35 gi|5733598|gb|AAD49696.1|AF159456_1 gp-340 variant (2413) 648 157.9 1.3e-35 gi|75048138|sp|Q95218.2|DMBT1_RABIT RecName: Full= (1594) 646 157.3 1.3e-35 gi|55962155|emb|CAI14492.1| deleted in malignant b (2403) 647 157.7 1.5e-35 gi|55962157|emb|CAI14494.1| deleted in malignant b (2412) 647 157.7 1.5e-35 gi|85687556|sp|Q9UGM3.2|DMBT1_HUMAN RecName: Full= (2413) 647 157.7 1.5e-35 gi|55962152|emb|CAI14489.1| deleted in malignant b (2542) 647 157.7 1.6e-35 gi|118129730|ref|XP_424429.2| PREDICTED: hypotheti ( 905) 637 155.1 3.6e-35 gi|194205581|ref|XP_001495444.2| PREDICTED: delete (1842) 638 155.5 5.3e-35 gi|118091389|ref|XP_001231760.1| PREDICTED: hypoth ( 622) 632 153.8 6.1e-35 gi|73998950|ref|XP_853901.1| PREDICTED: similar to ( 903) 630 153.4 1.1e-34 >>gi|60360288|dbj|BAD90388.1| mFLJ00268 protein [Mus mus (241 aa) initn: 1708 init1: 1708 opt: 1708 Z-score: 2124.7 bits: 400.5 E(): 1.2e-109 Smith-Waterman score: 1708; 100.000% identity (100.000% similar) in 241 aa overlap (1-241:1-241) 10 20 30 40 50 60 mFLJ00 GTHGLWVSAALDCGGGSDSNSPLEFRLVNGSSRCEGRVELLVQDAWQPLCAANWDLADAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 GTHGLWVSAALDCGGGSDSNSPLEFRLVNGSSRCEGRVELLVQDAWQPLCAANWDLADAT 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 VLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEPHLLSCPTSTLGAQACALGNSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 VLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEPHLLSCPTSTLGAQACALGNSA 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 SALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSAWDLRDAAVVCRQLGCGEAQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 SALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSAWDLRDAAVVCRQLGCGEAQLA 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 YDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVHAGTLRDAGVVCSGECEVSTCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 YDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVHAGTLRDAGVVCSGECEVSTCP 190 200 210 220 230 240 mFLJ00 P : gi|603 P >>gi|157041472|gb|ABV01370.1| SCART2 splice variant B [M (996 aa) initn: 1907 init1: 1464 opt: 1475 Z-score: 1827.2 bits: 347.6 E(): 4.5e-93 Smith-Waterman score: 1475; 93.392% identity (95.595% similar) in 227 aa overlap (13-236:325-551) 10 20 30 mFLJ00 GTHGLWVSAALDCGGGSDSN---SPLEFRLVNGSSRCEGRVE :: .:. : .::::::::::::::: gi|157 YGSGPLWTEAFRCMGNESLLFHCLREPGHQCGHDQDAALICSGEKFRLVNGSSRCEGRVE 300 310 320 330 340 350 40 50 60 70 80 90 mFLJ00 LLVQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 LLVQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEP 360 370 380 390 400 410 100 110 120 130 140 150 mFLJ00 HLLSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 HLLSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSA 420 430 440 450 460 470 160 170 180 190 200 210 mFLJ00 WDLRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 WDLRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVH 480 490 500 510 520 530 220 230 240 mFLJ00 AGTLRDAGVVCSGECEVSTCPP ::::::::::::: .. gi|157 AGTLRDAGVVCSGSLHIRLAAGKNRCAGRVEVFYQGTWGTVCDDAWDLQDAHVVCRQLGC 540 550 560 570 580 590 >>gi|157041470|gb|ABV01369.1| SCART2 splice variant A [M (1112 aa) initn: 1907 init1: 1464 opt: 1475 Z-score: 1826.6 bits: 347.6 E(): 4.9e-93 Smith-Waterman score: 1475; 93.392% identity (95.595% similar) in 227 aa overlap (13-236:441-667) 10 20 30 mFLJ00 GTHGLWVSAALDCGGGSDSN---SPLEFRLVNGSSRCEGRVE :: .:. : .::::::::::::::: gi|157 YGSGPLWTEAFRCMGNESLLFHCLREPGHQCGHDQDAALICSGEKFRLVNGSSRCEGRVE 420 430 440 450 460 470 40 50 60 70 80 90 mFLJ00 LLVQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 LLVQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEP 480 490 500 510 520 530 100 110 120 130 140 150 mFLJ00 HLLSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 HLLSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSA 540 550 560 570 580 590 160 170 180 190 200 210 mFLJ00 WDLRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 WDLRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVH 600 610 620 630 640 650 220 230 240 mFLJ00 AGTLRDAGVVCSGECEVSTCPP ::::::::::::: .. gi|157 AGTLRDAGVVCSGSLHIRLAAGKNRCAGRVEVFYQGTWGTVCDDAWDLQDAHVVCRQLGC 660 670 680 690 700 710 >>gi|149061487|gb|EDM11910.1| rCG47791, isoform CRA_a [R (995 aa) initn: 1170 init1: 1170 opt: 1177 Z-score: 1457.4 bits: 279.1 E(): 1.8e-72 Smith-Waterman score: 1177; 75.113% identity (87.330% similar) in 221 aa overlap (13-232:322-542) 10 20 30 40 mFLJ00 GTHGLWVSAALDCGGGSDSN-SPLEFRLVNGSSRCEGRVELL :: ..: . ::::::::: ::::::: gi|149 QGSGPVWLEAFRCVGNESMLFHCPQEPGHHCGHNQDVALTCSEFRLVNGSSDCEGRVELQ 300 310 320 330 340 350 50 60 70 80 90 100 mFLJ00 VQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEPHL :: :: :::::::::::: ::::::::: ::. : :::::. ..:: :::::::::::: gi|149 VQGAWAPLCAANWDLADAMVLCHQLNCGNAVSIPPGGHFGDGDAPIWPDVFHCVGTEPHL 360 370 380 390 400 410 110 120 130 140 150 160 mFLJ00 LSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSAWD : ::.:::::..:.:::.::..::::::.::::.:::.::::::. :.:.::::::. :: gi|149 LHCPASTLGAHSCVLGNTASTICSGLQDTLRLRDGQSYCDGRVEISLNGSWGRVLDDIWD 420 430 440 450 460 470 170 180 190 200 210 220 mFLJ00 LRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVHAG .: :.:::::: ::::: :::::::: .: ::::: :.:::::::: :::::.:::: :. gi|149 IRGASVVCRQLECGEAQGAYDAPAPGFRTAPVGLSQVRCLGSETHLMQCNVSTSLLVPAA 480 490 500 510 520 530 230 240 mFLJ00 TLRDAGVVCSGECEVSTCPP ::::::::::: gi|149 TLRDAGVVCSGSLRMRLAAGPGRCAGRVEVFYQGSWGTVCDDAWDLQDAQVVCRQLDCGH 540 550 560 570 580 590 >>gi|149061488|gb|EDM11911.1| rCG47791, isoform CRA_b [R (997 aa) initn: 1170 init1: 1170 opt: 1177 Z-score: 1457.3 bits: 279.1 E(): 1.8e-72 Smith-Waterman score: 1177; 75.113% identity (87.330% similar) in 221 aa overlap (13-232:322-542) 10 20 30 40 mFLJ00 GTHGLWVSAALDCGGGSDSN-SPLEFRLVNGSSRCEGRVELL :: ..: . ::::::::: ::::::: gi|149 QGSGPVWLEAFRCVGNESMLFHCPQEPGHHCGHNQDVALTCSEFRLVNGSSDCEGRVELQ 300 310 320 330 340 350 50 60 70 80 90 100 mFLJ00 VQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEPHL :: :: :::::::::::: ::::::::: ::. : :::::. ..:: :::::::::::: gi|149 VQGAWAPLCAANWDLADAMVLCHQLNCGNAVSIPPGGHFGDGDAPIWPDVFHCVGTEPHL 360 370 380 390 400 410 110 120 130 140 150 160 mFLJ00 LSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSAWD : ::.:::::..:.:::.::..::::::.::::.:::.::::::. :.:.::::::. :: gi|149 LHCPASTLGAHSCVLGNTASTICSGLQDTLRLRDGQSYCDGRVEISLNGSWGRVLDDIWD 420 430 440 450 460 470 170 180 190 200 210 220 mFLJ00 LRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVHAG .: :.:::::: ::::: :::::::: .: ::::: :.:::::::: :::::.:::: :. gi|149 IRGASVVCRQLECGEAQGAYDAPAPGFRTAPVGLSQVRCLGSETHLMQCNVSTSLLVPAA 480 490 500 510 520 530 230 240 mFLJ00 TLRDAGVVCSGECEVSTCPP ::::::::::: gi|149 TLRDAGVVCSGSLRMRLAAGPGRCAGRVEVFYQGSWGTVCDDAWDLQDAQVVCRQLDCGH 540 550 560 570 580 590 >>gi|27464818|gb|AAO16207.1| scavenger receptor cysteine (989 aa) initn: 1605 init1: 1135 opt: 1142 Z-score: 1413.9 bits: 271.1 E(): 4.7e-70 Smith-Waterman score: 1142; 72.000% identity (86.222% similar) in 225 aa overlap (13-236:322-546) 10 20 30 40 mFLJ00 GTHGLWVSAALDCGGGSDSN-SPLEFRLVNGSSRCEGRVELL :: .:. . ::::::::: ::::::: gi|274 QGSGPVWLEAFRCVGNESLLFHCPREPGHHCGHEQDAALTCSEFRLVNGSSDCEGRVELQ 300 310 320 330 340 350 50 60 70 80 90 100 mFLJ00 VQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEPHL :: .: :.:::::::::: ::::::::: ::..: :::::. . : :.:::::::::: gi|274 VQGTWAPVCAANWDLADAMVLCHQLNCGNAVSVPPGGHFGDGDDLIWPDIFHCVGTEPHL 360 370 380 390 400 410 110 120 130 140 150 160 mFLJ00 LSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSAWD : : .:::::..:.:::.::..:::::: ::::.:::.::::::. :::.::::::.::: gi|274 LHCAASTLGAHGCVLGNTASTICSGLQDILRLRDGQSYCDGRVEISLDGSWGRVLDDAWD 420 430 440 450 460 470 170 180 190 200 210 220 mFLJ00 LRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVHAG :. :.:::::::::::: ::::::: . .::::: :.::::::.:..::::.:::: :: gi|274 LHGASVVCRQLGCGEAQRAYDAPAPIFRRVPVGLSQVRCLGSETRLVHCNVSTSLLVPAG 480 490 500 510 520 530 230 240 mFLJ00 TLRDAGVVCSGECEVSTCPP ::::::::::: .: gi|274 TLRDAGVVCSGSLRVRLAAGPGRCAGRVELFYQGSWGTVCDDAWDLQDAQVVCRQLDCGH 540 550 560 570 580 590 >>gi|148685977|gb|EDL17924.1| RIKEN cDNA E430002D04, iso (991 aa) initn: 1605 init1: 1135 opt: 1142 Z-score: 1413.9 bits: 271.1 E(): 4.7e-70 Smith-Waterman score: 1142; 72.000% identity (86.222% similar) in 225 aa overlap (13-236:322-546) 10 20 30 40 mFLJ00 GTHGLWVSAALDCGGGSDSN-SPLEFRLVNGSSRCEGRVELL :: .:. . ::::::::: ::::::: gi|148 QGSGPVWLEAFRCVGNESLLFHCPREPGHHCGHEQDAALTCSEFRLVNGSSDCEGRVELQ 300 310 320 330 340 350 50 60 70 80 90 100 mFLJ00 VQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEPHL :: .: :.:::::::::: ::::::::: ::..: :::::. . : :.:::::::::: gi|148 VQGTWAPVCAANWDLADAMVLCHQLNCGNAVSVPPGGHFGDGDDLIWPDIFHCVGTEPHL 360 370 380 390 400 410 110 120 130 140 150 160 mFLJ00 LSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSAWD : : .:::::..:.:::.::..:::::: ::::.:::.::::::. :::.::::::.::: gi|148 LHCAASTLGAHGCVLGNTASTICSGLQDILRLRDGQSYCDGRVEISLDGSWGRVLDDAWD 420 430 440 450 460 470 170 180 190 200 210 220 mFLJ00 LRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVHAG :. :.:::::::::::: ::::::: . .::::: :.::::::.:..::::.:::: :: gi|148 LHGASVVCRQLGCGEAQRAYDAPAPIFRRVPVGLSQVRCLGSETRLVHCNVSTSLLVPAG 480 490 500 510 520 530 230 240 mFLJ00 TLRDAGVVCSGECEVSTCPP ::::::::::: .: gi|148 TLRDAGVVCSGSLRVRLAAGPGRCAGRVELFYQGSWGTVCDDAWDLQDAQVVCRQLDCGH 540 550 560 570 580 590 >>gi|26352924|dbj|BAC40092.1| unnamed protein product [M (991 aa) initn: 1594 init1: 1124 opt: 1131 Z-score: 1400.3 bits: 268.5 E(): 2.7e-69 Smith-Waterman score: 1131; 71.556% identity (85.778% similar) in 225 aa overlap (13-236:322-546) 10 20 30 40 mFLJ00 GTHGLWVSAALDCGGGSDSN-SPLEFRLVNGSSRCEGRVELL :: .:. . ::::::::: ::::::: gi|263 QGSGPVWLEAFRCVGNESLLFHCPREPGHHCGHEQDAALTCSEFRLVNGSSDCEGRVELQ 300 310 320 330 340 350 50 60 70 80 90 100 mFLJ00 VQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEPHL :: .: :.:::::::::: ::::::::: ::..: :::::. . : :.:::::::::: gi|263 VQGTWAPVCAANWDLADAMVLCHQLNCGNAVSVPPGGHFGDGDDLIWPDIFHCVGTEPHL 360 370 380 390 400 410 110 120 130 140 150 160 mFLJ00 LSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSAWD : : .:::::..:.:::.::..:::::: ::::.:::.::: ::. :::.::::::.::: gi|263 LHCAASTLGAHGCVLGNTASTICSGLQDILRLRDGQSYCDGCVEISLDGSWGRVLDDAWD 420 430 440 450 460 470 170 180 190 200 210 220 mFLJ00 LRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVHAG :. :.:::::::::::: ::::::: . .::::: :.::::::.:..::::.:::: :: gi|263 LHGASVVCRQLGCGEAQRAYDAPAPIFRRVPVGLSQVRCLGSETRLVHCNVSTSLLVPAG 480 490 500 510 520 530 230 240 mFLJ00 TLRDAGVVCSGECEVSTCPP ::::::::::: .: gi|263 TLRDAGVVCSGSLRVRLAAGPGRCAGRVELFYQGSWGTVCDDAWDLQDAQVVCRQLDCGH 540 550 560 570 580 590 >>gi|109091047|ref|XP_001093501.1| PREDICTED: similar to (647 aa) initn: 1279 init1: 1070 opt: 1085 Z-score: 1345.7 bits: 257.8 E(): 3e-66 Smith-Waterman score: 1085; 70.588% identity (85.068% similar) in 221 aa overlap (13-232:64-284) 10 20 30 40 mFLJ00 GTHGLWVSAALDCGGGSDSNSPL-EFRLVNGSSRCEGRVELL :: : :.. ::::::::: ::::::: gi|109 RGSGPVWTETFRCAGDESLLFHCPRGNGSQCGPGRDAGLRCSEFRLVNGSSSCEGRVELQ 40 50 60 70 80 90 50 60 70 80 90 100 mFLJ00 VQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEPHL :: .: ::::..::.::::::::::::: :::.:.:::::. .. : :.::: ::::.: gi|109 VQGSWAPLCATHWDIADATVLCHQLNCGNAVAAPRGGHFGDGDAAIWPDAFHCGGTEPYL 100 110 120 130 140 150 110 120 130 140 150 160 mFLJ00 LSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSAWD .::.::::: ::: ::::::.:::: :.:::::::.::::::: :.:.::::::.::: gi|109 WNCPVSTLGAPACAPGNSASAVCSGLPHAVRLREGQSRCDGRVEVSLEGVWGRVLDDAWD 160 170 180 190 200 210 170 180 190 200 210 220 mFLJ00 LRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVHAG :: : ::::::::: :. :::::::.. .. :.:: ..:::.::.::::::::.: :: gi|109 LRGADVVCRQLGCGAAEQAYDAPAPSRGSVQVSLSRARCLGTETRLTQCNVSATLQEPAG 220 230 240 250 260 270 230 240 mFLJ00 TLRDAGVVCSGECEVSTCPP : ::::::::: gi|109 TSRDAGVVCSGSLGVRLAAGPGRCAWGTVCDDAWDLQDAHVVCRQLGCGRALSALGAAHF 280 290 300 310 320 330 >>gi|47077659|dbj|BAD18710.1| FLJ00268 protein [Homo sap (695 aa) initn: 1469 init1: 1055 opt: 1074 Z-score: 1331.6 bits: 255.3 E(): 1.8e-65 Smith-Waterman score: 1074; 68.696% identity (83.043% similar) in 230 aa overlap (13-241:115-342) 10 20 30 40 mFLJ00 GTHGLWVSAALDCGGGSDSNSPL-EFRLVNGSSRCEGRVELL :: : :.. :::.::::: ::::::. gi|470 RGSGPVWTEAFRCAGNESLLFHCPRGRGSQCGHGHDAGLRCSEFRMVNGSSSCEGRVEFQ 90 100 110 120 130 140 50 60 70 80 90 100 mFLJ00 VQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEGPIRTDVFHCVGTEPHL :: .: ::::..::.::::::::::::: :::.: :::::. .. : :.::: ::: .: gi|470 VQGSWAPLCATHWDIADATVLCHQLNCGNAVAVPGGGHFGDGDAAIWPDAFHCEGTESYL 150 160 170 180 190 200 110 120 130 140 150 160 mFLJ00 LSCPTSTLGAQACALGNSASALCSGLQDALRLREGQSHCDGRVEVFLDGTWGRVLDSAWD .::.::::: ::: ::.:::.:::: :::::::::.::::::: :::.::::::.::: gi|470 WNCPVSTLGAPACAPGNTASAVCSGLAHALRLREGQSRCDGRVEVSLDGVWGRVLDDAWD 210 220 230 240 250 260 170 180 190 200 210 220 mFLJ00 LRDAAVVCRQLGCGEAQLAYDAPAPGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVHAG :: :.:::::::: :: :::::::.. .. :.:: :.:::.::.::::::::.: :: gi|470 LRGAGVVCRQLGCRGAQQAYDAPAPSRGSVQVALSRVRCLGTETRLTQCNVSATLQEPAG 270 280 290 300 310 320 230 240 mFLJ00 TLRDAGVVCSGECEVSTCPP : ::::::::.: :.: : gi|470 TSRDAGVVCSAE--VGTASPMARRHGIPGALTLSLHREPQGAAGRGAGALHGGAWGTVCD 330 340 350 360 370 380 241 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 03:22:29 2009 done: Fri Mar 13 03:27:40 2009 Total Scan time: 731.960 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]