# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mtj02377.fasta.nr -Q ../query/mKIAA0157.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0157, 229 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919598 sequences Expectation_n fit: rho(ln(x))= 5.7521+/-0.000191; mu= 6.3319+/- 0.011 mean_var=94.0208+/-17.810, 0's: 39 Z-trim: 44 B-trim: 0 in 0/66 Lambda= 0.132270 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148685805|gb|EDL17752.1| RIKEN cDNA C430003P19, ( 311) 1292 256.0 4.9e-66 gi|211827470|gb|AAH30838.2| Fam175b protein [Mus m ( 346) 1292 256.0 5.3e-66 gi|74142958|dbj|BAE42506.1| unnamed protein produc ( 402) 1292 256.1 6e-66 gi|84029318|sp|Q3TCJ1.1|F175B_MOUSE RecName: Full= ( 415) 1292 256.1 6.1e-66 gi|148685806|gb|EDL17753.1| RIKEN cDNA C430003P19, ( 423) 1292 256.1 6.2e-66 gi|109090880|ref|XP_001083755.1| PREDICTED: hypoth ( 311) 1145 227.9 1.4e-57 gi|109090878|ref|XP_001083977.1| PREDICTED: hypoth ( 424) 1145 228.0 1.7e-57 gi|194383832|dbj|BAG59274.1| unnamed protein produ ( 415) 1136 226.3 5.6e-57 gi|194679044|ref|XP_587356.4| PREDICTED: hypotheti ( 415) 1092 217.9 1.9e-54 gi|73998984|ref|XP_535051.2| PREDICTED: hypothetic ( 423) 1086 216.8 4.2e-54 gi|119913244|ref|XP_001250919.1| PREDICTED: simila ( 334) 1074 214.4 1.7e-53 gi|224053162|ref|XP_002190018.1| PREDICTED: simila ( 397) 862 174.0 3e-41 gi|90085347|dbj|BAE91414.1| unnamed protein produc ( 184) 770 156.2 3.2e-36 gi|224170739|ref|XP_002192060.1| PREDICTED: hypoth ( 155) 656 134.4 9.9e-30 gi|60099205|emb|CAH65433.1| hypothetical protein [ ( 347) 600 124.0 3e-26 gi|45709102|gb|AAH67636.1| Zgc:85800 [Danio rerio] ( 311) 324 71.3 2e-10 gi|148685803|gb|EDL17750.1| RIKEN cDNA C430003P19, ( 291) 251 57.3 2.9e-06 gi|51950034|gb|AAH82428.1| MGC83343 protein [Xenop ( 284) 209 49.3 0.00075 >>gi|148685805|gb|EDL17752.1| RIKEN cDNA C430003P19, iso (311 aa) initn: 1292 init1: 1292 opt: 1292 Z-score: 1341.9 bits: 256.0 E(): 4.9e-66 Smith-Waterman score: 1292; 100.000% identity (100.000% similar) in 195 aa overlap (35-229:117-311) 10 20 30 40 50 60 mKIAA0 VPFFHCNEAESVDYLLPGFEANLLSCVFPPQAVCADVEKSERVVESCQAEVNKLRRQITQ :::::::::::::::::::::::::::::: gi|148 EHGTDFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQ 90 100 110 120 130 140 70 80 90 100 110 120 mKIAA0 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD 150 160 170 180 190 200 130 140 150 160 170 180 mKIAA0 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE 210 220 230 240 250 260 190 200 210 220 mKIAA0 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI ::::::::::::::::::::::::::::::::::::::::::::: gi|148 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI 270 280 290 300 310 >>gi|211827470|gb|AAH30838.2| Fam175b protein [Mus muscu (346 aa) initn: 1292 init1: 1292 opt: 1292 Z-score: 1341.2 bits: 256.0 E(): 5.3e-66 Smith-Waterman score: 1292; 100.000% identity (100.000% similar) in 195 aa overlap (35-229:152-346) 10 20 30 40 50 60 mKIAA0 VPFFHCNEAESVDYLLPGFEANLLSCVFPPQAVCADVEKSERVVESCQAEVNKLRRQITQ :::::::::::::::::::::::::::::: gi|211 EHGTDFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQ 130 140 150 160 170 180 70 80 90 100 110 120 mKIAA0 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD 190 200 210 220 230 240 130 140 150 160 170 180 mKIAA0 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE 250 260 270 280 290 300 190 200 210 220 mKIAA0 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI ::::::::::::::::::::::::::::::::::::::::::::: gi|211 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI 310 320 330 340 >>gi|74142958|dbj|BAE42506.1| unnamed protein product [M (402 aa) initn: 1292 init1: 1292 opt: 1292 Z-score: 1340.3 bits: 256.1 E(): 6e-66 Smith-Waterman score: 1292; 100.000% identity (100.000% similar) in 195 aa overlap (35-229:208-402) 10 20 30 40 50 60 mKIAA0 VPFFHCNEAESVDYLLPGFEANLLSCVFPPQAVCADVEKSERVVESCQAEVNKLRRQITQ :::::::::::::::::::::::::::::: gi|741 EHGTDFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQ 180 190 200 210 220 230 70 80 90 100 110 120 mKIAA0 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD 240 250 260 270 280 290 130 140 150 160 170 180 mKIAA0 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE 300 310 320 330 340 350 190 200 210 220 mKIAA0 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI ::::::::::::::::::::::::::::::::::::::::::::: gi|741 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI 360 370 380 390 400 >>gi|84029318|sp|Q3TCJ1.1|F175B_MOUSE RecName: Full=Prot (415 aa) initn: 1292 init1: 1292 opt: 1292 Z-score: 1340.2 bits: 256.1 E(): 6.1e-66 Smith-Waterman score: 1292; 100.000% identity (100.000% similar) in 195 aa overlap (35-229:221-415) 10 20 30 40 50 60 mKIAA0 VPFFHCNEAESVDYLLPGFEANLLSCVFPPQAVCADVEKSERVVESCQAEVNKLRRQITQ :::::::::::::::::::::::::::::: gi|840 EHGTDFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQ 200 210 220 230 240 250 70 80 90 100 110 120 mKIAA0 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|840 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD 260 270 280 290 300 310 130 140 150 160 170 180 mKIAA0 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|840 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE 320 330 340 350 360 370 190 200 210 220 mKIAA0 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI ::::::::::::::::::::::::::::::::::::::::::::: gi|840 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI 380 390 400 410 >>gi|148685806|gb|EDL17753.1| RIKEN cDNA C430003P19, iso (423 aa) initn: 1292 init1: 1292 opt: 1292 Z-score: 1340.0 bits: 256.1 E(): 6.2e-66 Smith-Waterman score: 1292; 100.000% identity (100.000% similar) in 195 aa overlap (35-229:229-423) 10 20 30 40 50 60 mKIAA0 VPFFHCNEAESVDYLLPGFEANLLSCVFPPQAVCADVEKSERVVESCQAEVNKLRRQITQ :::::::::::::::::::::::::::::: gi|148 EHGTDFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQ 200 210 220 230 240 250 70 80 90 100 110 120 mKIAA0 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD 260 270 280 290 300 310 130 140 150 160 170 180 mKIAA0 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE 320 330 340 350 360 370 190 200 210 220 mKIAA0 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI ::::::::::::::::::::::::::::::::::::::::::::: gi|148 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI 380 390 400 410 420 >>gi|109090880|ref|XP_001083755.1| PREDICTED: hypothetic (311 aa) initn: 1145 init1: 1145 opt: 1145 Z-score: 1190.3 bits: 227.9 E(): 1.4e-57 Smith-Waterman score: 1145; 87.179% identity (94.872% similar) in 195 aa overlap (35-229:117-311) 10 20 30 40 50 60 mKIAA0 VPFFHCNEAESVDYLLPGFEANLLSCVFPPQAVCADVEKSERVVESCQAEVNKLRRQITQ :::::::::::::::::::::::::::::: gi|109 EHGTDFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQ 90 100 110 120 130 140 70 80 90 100 110 120 mKIAA0 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD .:::::::::::::.::::::::::.::::::: :::.:::::::...: ::::::::: gi|109 RKNEKEQERRLQQAVLSRQMPSESLDPAFSPRMPSSGFAAEGRSTLGDAEASDPPPPYSD 150 160 170 180 190 200 130 140 150 160 170 180 mKIAA0 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE ::::::::::::::::::.:::::::::::.:::::.:::. :::::: : : ::::::: gi|109 FHPNNQESTLSHSRMERSIFMPRPQAVGSSNYASTSAGLKYPGSGADLPPPQRAAGDSGE 210 220 230 240 250 260 190 200 210 220 mKIAA0 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI .::::::::::::.: .:::::::.::: ::::::::::::::: gi|109 DSDDSDYENLIDPTEPSNSEYSHSKDSRPVTHPDEDPRNTQTSQI 270 280 290 300 310 >>gi|109090878|ref|XP_001083977.1| PREDICTED: hypothetic (424 aa) initn: 1145 init1: 1145 opt: 1145 Z-score: 1188.4 bits: 228.0 E(): 1.7e-57 Smith-Waterman score: 1145; 87.179% identity (94.872% similar) in 195 aa overlap (35-229:230-424) 10 20 30 40 50 60 mKIAA0 VPFFHCNEAESVDYLLPGFEANLLSCVFPPQAVCADVEKSERVVESCQAEVNKLRRQITQ :::::::::::::::::::::::::::::: gi|109 EHGTDFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQ 200 210 220 230 240 250 70 80 90 100 110 120 mKIAA0 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD .:::::::::::::.::::::::::.::::::: :::.:::::::...: ::::::::: gi|109 RKNEKEQERRLQQAVLSRQMPSESLDPAFSPRMPSSGFAAEGRSTLGDAEASDPPPPYSD 260 270 280 290 300 310 130 140 150 160 170 180 mKIAA0 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE ::::::::::::::::::.:::::::::::.:::::.:::. :::::: : : ::::::: gi|109 FHPNNQESTLSHSRMERSIFMPRPQAVGSSNYASTSAGLKYPGSGADLPPPQRAAGDSGE 320 330 340 350 360 370 190 200 210 220 mKIAA0 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI .::::::::::::.: .:::::::.::: ::::::::::::::: gi|109 DSDDSDYENLIDPTEPSNSEYSHSKDSRPVTHPDEDPRNTQTSQI 380 390 400 410 420 >>gi|194383832|dbj|BAG59274.1| unnamed protein product [ (415 aa) initn: 1136 init1: 1136 opt: 1136 Z-score: 1179.3 bits: 226.3 E(): 5.6e-57 Smith-Waterman score: 1136; 86.667% identity (94.872% similar) in 195 aa overlap (35-229:221-415) 10 20 30 40 50 60 mKIAA0 VPFFHCNEAESVDYLLPGFEANLLSCVFPPQAVCADVEKSERVVESCQAEVNKLRRQITQ :::::::::.:::::::::::::::::::: gi|194 EHGTDFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKGERVVESCQAEVNKLRRQITQ 200 210 220 230 240 250 70 80 90 100 110 120 mKIAA0 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD .:::::::::::::.::::::::::.::::::: :::.:::::::...: ::::::::: gi|194 RKNEKEQERRLQQAVLSRQMPSESLDPAFSPRMPSSGFAAEGRSTLGDAEASDPPPPYSD 260 270 280 290 300 310 130 140 150 160 170 180 mKIAA0 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE ::::::::::::::::::::::::::::::.:::::.:::. :::::: : : ::::::: gi|194 FHPNNQESTLSHSRMERSVFMPRPQAVGSSNYASTSAGLKYPGSGADLPPPQRAAGDSGE 320 330 340 350 360 370 190 200 210 220 mKIAA0 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI .::::::::::::.: .:::::::.::: .:::::::::::::: gi|194 DSDDSDYENLIDPTEPSNSEYSHSKDSRPMAHPDEDPRNTQTSQI 380 390 400 410 >>gi|194679044|ref|XP_587356.4| PREDICTED: hypothetical (415 aa) initn: 1092 init1: 1092 opt: 1092 Z-score: 1133.9 bits: 217.9 E(): 1.9e-54 Smith-Waterman score: 1092; 83.590% identity (93.333% similar) in 195 aa overlap (35-229:221-415) 10 20 30 40 50 60 mKIAA0 VPFFHCNEAESVDYLLPGFEANLLSCVFPPQAVCADVEKSERVVESCQAEVNKLRRQITQ :::::::::::::::::::::::::::::: gi|194 EHGADFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQ 200 210 220 230 240 250 70 80 90 100 110 120 mKIAA0 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD .:::::::::::::..::::::::..:.::::: : ::.:::::::..:: ::::::::: gi|194 RKNEKEQERRLQQAMVSRQMPSESVDPTFSPRMPYPGFTAEGRSTLGDTEASDPPPPYSD 260 270 280 290 300 310 130 140 150 160 170 180 mKIAA0 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE .::::::::::::::: :::::::::::::::::::.:::. ::::: ::. :::::.: gi|194 LHPNNQESTLSHSRMESSVFMPRPQAVGSSSYASTSAGLKYPGSGADAPPSHRAAGDSAE 320 330 340 350 360 370 190 200 210 220 mKIAA0 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI :::::::::::::.: :.::::.:..::: :::: :::::::: gi|194 ESDDSDYENLIDPTEPPNSEYSRSRDSRPMTHPDGGSRNTQTSQI 380 390 400 410 >>gi|73998984|ref|XP_535051.2| PREDICTED: hypothetical p (423 aa) initn: 1086 init1: 1086 opt: 1086 Z-score: 1127.6 bits: 216.8 E(): 4.2e-54 Smith-Waterman score: 1086; 83.590% identity (92.821% similar) in 195 aa overlap (35-229:229-423) 10 20 30 40 50 60 mKIAA0 VPFFHCNEAESVDYLLPGFEANLLSCVFPPQAVCADVEKSERVVESCQAEVNKLRRQITQ :::::::::::::::::::::::::::::: gi|739 EHGTDFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQ 200 210 220 230 240 250 70 80 90 100 110 120 mKIAA0 KKNEKEQERRLQQALLSRQMPSESLEPAFSPRMSYSGFSAEGRSTLAETEPSDPPPPYSD .:::::::::::::..:::.::::: ::::::: :::..:::::::...: ::::::::: gi|739 RKNEKEQERRLQQAMISRQVPSESLGPAFSPRMPYSGLAAEGRSTLGDAEASDPPPPYSD 260 270 280 290 300 310 130 140 150 160 170 180 mKIAA0 FHPNNQESTLSHSRMERSVFMPRPQAVGSSSYASTSGGLKFTGSGADLLPSQSAAGDSGE :::::::::::::::: :::::::::::::..::::.:::. :::.:: ::: ::::: : gi|739 FHPNNQESTLSHSRMETSVFMPRPQAVGSSNFASTSAGLKYPGSGTDLPPSQRAAGDSIE 320 330 340 350 360 370 190 200 210 220 mKIAA0 ESDDSDYENLIDPAESPHSEYSHSKNSRPSTHPDEDPRNTQTSQI :::::::::::::.: .::::::..::: :::: :::::::: gi|739 ESDDSDYENLIDPTEPSNSEYSHSRDSRPMTHPDGGSRNTQTSQI 380 390 400 410 420 229 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 03:21:30 2009 done: Fri Mar 13 03:26:32 2009 Total Scan time: 711.740 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]