# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mtj00724.fasta.nr -Q ../query/mKIAA1739.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1739, 755 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7916193 sequences Expectation_n fit: rho(ln(x))= 5.5669+/-0.000189; mu= 12.0668+/- 0.011 mean_var=91.6310+/-17.750, 0's: 29 Z-trim: 49 B-trim: 139 in 1/66 Lambda= 0.133984 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|8134699|sp|Q64151.1|SEM4C_MOUSE RecName: Full=S ( 834) 5030 982.8 0 gi|148682548|gb|EDL14495.1| mCG17761, isoform CRA_ ( 914) 5030 982.8 0 gi|149046375|gb|EDL99268.1| sema domain, immunoglo ( 834) 4789 936.2 0 gi|73970098|ref|XP_538464.2| PREDICTED: similar to ( 849) 4532 886.6 0 gi|194671303|ref|XP_604387.4| PREDICTED: similar t ( 833) 4523 884.8 0 gi|109103896|ref|XP_001100467.1| PREDICTED: semaph ( 833) 4512 882.7 0 gi|114579013|ref|XP_515634.2| PREDICTED: semaphori ( 858) 4486 877.7 0 gi|47606208|sp|Q9C0C4.2|SEM4C_HUMAN RecName: Full= ( 833) 4482 876.9 0 gi|119591731|gb|EAW71325.1| sema domain, immunoglo ( 886) 4482 876.9 0 gi|37182802|gb|AAQ89201.1| SEMA4C [Homo sapiens] ( 833) 4479 876.3 0 gi|126303453|ref|XP_001379915.1| PREDICTED: simila ( 832) 4218 825.9 0 gi|32425767|gb|AAH17476.2| SEMA4C protein [Homo sa ( 645) 3925 769.1 0 gi|119591732|gb|EAW71326.1| sema domain, immunoglo ( 794) 3787 742.5 1.4e-211 gi|38649055|gb|AAH62984.1| SEMA4C protein [Homo sa ( 543) 3273 643.0 8.7e-182 gi|50415520|gb|AAH78116.1| Unknown (protein for MG ( 834) 3164 622.1 2.6e-175 gi|62822419|gb|AAY14967.1| unknown [Homo sapiens] ( 510) 3079 605.5 1.6e-170 gi|7020424|dbj|BAA91124.1| unnamed protein product ( 510) 3070 603.8 5.4e-170 gi|122891339|emb|CAM14131.1| novel protein similar ( 811) 2568 506.9 1.2e-140 gi|134054524|emb|CAM73256.1| unnamed protein produ ( 863) 2438 481.8 4.7e-133 gi|194220400|ref|XP_001916376.1| PREDICTED: sema d ( 647) 2414 477.1 9.5e-132 gi|22761444|dbj|BAC11588.1| unnamed protein produc ( 333) 2022 401.0 3.8e-109 gi|149585882|ref|XP_001520007.1| PREDICTED: simila ( 465) 1957 388.6 2.9e-105 gi|33341678|gb|AAQ15210.1|AF370374_1 FP2823 [Homo ( 374) 1760 350.4 7.2e-94 gi|224052725|ref|XP_002196424.1| PREDICTED: sema d ( 826) 1757 350.1 1.9e-93 gi|13633937|sp|Q9NTN9.1|SEM4G_HUMAN RecName: Full= ( 838) 1742 347.3 1.5e-92 gi|109090287|ref|XP_001109068.1| PREDICTED: semaph ( 839) 1737 346.3 2.9e-92 gi|47123219|gb|AAH70859.1| MGC84614 protein [Xenop ( 830) 1735 345.9 3.7e-92 gi|149040257|gb|EDL94295.1| sema domain, immunoglo ( 837) 1723 343.6 1.9e-91 gi|8134702|sp|Q9WUH7.1|SEM4G_MOUSE RecName: Full=S ( 837) 1702 339.5 3.1e-90 gi|126273501|ref|XP_001379491.1| PREDICTED: simila ( 840) 1694 338.0 9.1e-90 gi|73998651|ref|XP_543973.2| PREDICTED: similar to ( 840) 1688 336.8 2e-89 gi|56462541|emb|CAI10916.1| sema domain, immunoglo ( 843) 1670 333.3 2.3e-88 gi|109090285|ref|XP_001109124.1| PREDICTED: sema d ( 844) 1667 332.8 3.4e-88 gi|151554276|gb|AAI48104.1| SEMA4G protein [Bos ta ( 844) 1653 330.1 2.2e-87 gi|194205755|ref|XP_001916730.1| PREDICTED: sema d ( 844) 1643 328.1 8.5e-87 gi|148709996|gb|EDL41942.1| sema domain, immunoglo ( 776) 1610 321.7 6.6e-85 gi|194224945|ref|XP_001493931.2| PREDICTED: simila ( 937) 1604 320.6 1.7e-84 gi|189526148|ref|XP_693092.3| PREDICTED: similar t ( 879) 1596 319.0 4.8e-84 gi|114625455|ref|XP_001141771.1| PREDICTED: semaph ( 928) 1593 318.5 7.4e-84 gi|32493365|gb|AAH54500.1| Sema domain, immunoglob ( 862) 1590 317.9 1e-83 gi|37927181|pdb|1OLZ|A Chain A, The Ligand-Binding ( 663) 1588 317.4 1.1e-83 gi|109112122|ref|XP_001090890.1| PREDICTED: semaph ( 862) 1589 317.7 1.2e-83 gi|119583171|gb|EAW62767.1| hCG1985052, isoform CR ( 853) 1588 317.5 1.4e-83 gi|168270916|dbj|BAG10251.1| semaphorin-4D precurs ( 862) 1588 317.5 1.4e-83 gi|8134701|sp|Q92854.1|SEM4D_HUMAN RecName: Full=S ( 862) 1588 317.5 1.4e-83 gi|68533115|dbj|BAE06112.1| SEMA4D variant protein ( 870) 1588 317.5 1.4e-83 gi|194041392|ref|XP_001928494.1| PREDICTED: simila ( 865) 1584 316.7 2.3e-83 gi|74210023|dbj|BAE21302.1| unnamed protein produc ( 814) 1569 313.8 1.7e-82 gi|49248072|gb|AAH49780.2| Sema domain, immunoglob ( 861) 1569 313.8 1.7e-82 gi|8134689|sp|O09126.1|SEM4D_MOUSE RecName: Full=S ( 861) 1565 313.0 3e-82 >>gi|8134699|sp|Q64151.1|SEM4C_MOUSE RecName: Full=Semap (834 aa) initn: 5014 init1: 5014 opt: 5030 Z-score: 5253.0 bits: 982.8 E(): 0 Smith-Waterman score: 5030; 98.784% identity (99.595% similar) in 740 aa overlap (17-755:95-834) 10 20 30 40 mKIAA1 RLWSCKERSLGRLQLRRKLNVPRKGRA-QTECFNFIRFLQPYNSSH .:.. .::.. :::::::::::::::::: gi|813 LYVGAREALFAFSVEALELQGAISWEAPAEKKIECTQKGKSNQTECFNFIRFLQPYNSSH 70 80 90 100 110 120 50 60 70 80 90 100 mKIAA1 LYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 LYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNF 130 140 150 160 170 180 110 120 130 140 150 160 mKIAA1 LGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 LGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAV 190 200 210 220 230 240 170 180 190 200 210 220 mKIAA1 EYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 EYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHTLR 250 260 270 280 290 300 230 240 250 260 270 280 mKIAA1 GASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPVPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 GASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPVPS 310 320 330 340 350 360 290 300 310 320 330 340 mKIAA1 PRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 PRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVV 370 380 390 400 410 420 350 360 370 380 390 400 mKIAA1 ADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKKVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 ADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKKVL 430 440 450 460 470 480 410 420 430 440 450 460 mKIAA1 FAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHVAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 FAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHVAN 490 500 510 520 530 540 470 480 490 500 510 520 mKIAA1 LDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPGSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 LDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPGSF 550 560 570 580 590 600 530 540 550 560 570 580 mKIAA1 LYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLENLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 LYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLENLG 610 620 630 640 650 660 590 600 610 620 630 640 mKIAA1 LVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFRPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 LVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFRPG 670 680 690 700 710 720 650 660 670 680 690 700 mKIAA1 PETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 PETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRN 730 740 750 760 770 780 710 720 730 740 750 mKIAA1 SNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV :::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 SNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV 790 800 810 820 830 >>gi|148682548|gb|EDL14495.1| mCG17761, isoform CRA_b [M (914 aa) initn: 5014 init1: 5014 opt: 5030 Z-score: 5252.4 bits: 982.8 E(): 0 Smith-Waterman score: 5030; 98.784% identity (99.595% similar) in 740 aa overlap (17-755:175-914) 10 20 30 40 mKIAA1 RLWSCKERSLGRLQLRRKLNVPRKGRA-QTECFNFIRFLQPYNSSH .:.. .::.. :::::::::::::::::: gi|148 LYVGAREALFAFSVEALELQGAISWEAPAEKKIECTQKGKSNQTECFNFIRFLQPYNSSH 150 160 170 180 190 200 50 60 70 80 90 100 mKIAA1 LYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNF 210 220 230 240 250 260 110 120 130 140 150 160 mKIAA1 LGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAV 270 280 290 300 310 320 170 180 190 200 210 220 mKIAA1 EYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHTLR 330 340 350 360 370 380 230 240 250 260 270 280 mKIAA1 GASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPVPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPVPS 390 400 410 420 430 440 290 300 310 320 330 340 mKIAA1 PRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVV 450 460 470 480 490 500 350 360 370 380 390 400 mKIAA1 ADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKKVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKKVL 510 520 530 540 550 560 410 420 430 440 450 460 mKIAA1 FAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHVAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHVAN 570 580 590 600 610 620 470 480 490 500 510 520 mKIAA1 LDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPGSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPGSF 630 640 650 660 670 680 530 540 550 560 570 580 mKIAA1 LYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLENLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLENLG 690 700 710 720 730 740 590 600 610 620 630 640 mKIAA1 LVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFRPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFRPG 750 760 770 780 790 800 650 660 670 680 690 700 mKIAA1 PETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRN 810 820 830 840 850 860 710 720 730 740 750 mKIAA1 SNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV :::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV 870 880 890 900 910 >>gi|149046375|gb|EDL99268.1| sema domain, immunoglobuli (834 aa) initn: 4609 init1: 4609 opt: 4789 Z-score: 5001.2 bits: 936.2 E(): 0 Smith-Waterman score: 4789; 93.927% identity (97.841% similar) in 741 aa overlap (17-755:95-834) 10 20 30 40 mKIAA1 RLWSCKERSLGRLQLRRKLNVPRKGRA-QTECFNFIRFLQPYNSSH .:.. .::.. :::::::::::::::.:: gi|149 LYVGAREALFAFSVEALELQGVISWEAPAEKKIECTQKGKSNQTECFNFIRFLQPYNASH 70 80 90 100 110 120 50 60 70 80 90 100 mKIAA1 LYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNF 130 140 150 160 170 180 110 120 130 140 150 160 mKIAA1 LGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAV ::::::::: :: :: :::::::::::::::::::::::::::::::::::::::::::: gi|149 LGTEPVILRNMGPHHPIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAV 190 200 210 220 230 240 170 180 190 200 210 220 mKIAA1 EYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|149 EYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLRAVHTLL 250 260 270 280 290 300 230 240 250 260 270 280 mKIAA1 GASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPVPS ::::::::::.::::::::::::::::::::.::::::::.::::::::::::::::::. gi|149 GASWHNTTFFAVFQARWGDMDLSAVCEYQLEHIQQVFEGPFKEYSEQAQKWARYTDPVPT 310 320 330 340 350 360 290 300 310 320 330 340 mKIAA1 PRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVV :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|149 PRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEEQVKPRLGRPLLVKKNTNFTHVV 370 380 390 400 410 420 350 360 370 380 390 400 mKIAA1 ADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKKVL :::. ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ADRILGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKKVL 430 440 450 460 470 480 410 420 430 440 450 460 mKIAA1 FAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHVAN ::::::::::::::::::::::::::::::::::::::::::::: .:.:::.::::::: gi|149 FAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVAT-GGHSGSLLVQHVAN 490 500 510 520 530 540 470 480 490 500 510 520 mKIAA1 LDTSKMCNQYGIKKVRSI-PKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPGS :: :::: ::.:::.: . :::::::.::::::::::::::::: ::: ..::::::::: gi|149 LDPSKMCIQYAIKKARPVVPKNITVVAGTDLVLPCHLSSNLAHALWTFRGRDLPAEQPGS 550 560 570 580 590 600 530 540 550 560 570 580 mKIAA1 FLYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLENL :::::::::::::::::::::::.::::::::.::::::::.:::::::::::::::::: gi|149 FLYDTGLQALVVMAAQSRHSGPYHCYSEEQGTKLAAESYLVSVVAGSSVTLEARAPLENL 610 620 630 640 650 660 590 600 610 620 630 640 mKIAA1 GLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFRP :::::::::::::::::::::::::::::::::::.::.::::::::::::::::::::: gi|149 GLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGSKAAERTLVYPLELPKEPASPPFRP 670 680 690 700 710 720 650 660 670 680 690 700 mKIAA1 GPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGR 730 740 750 760 770 780 710 720 730 740 750 mKIAA1 NSNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV ::::::::::::::::: ::::::::.:::::::::::::::::::::::: gi|149 NSNANGYVRLQLGGEDREGSGHPLPEIADELRRKLQQRQPLPDSNPEESSV 790 800 810 820 830 >>gi|73970098|ref|XP_538464.2| PREDICTED: similar to Sem (849 aa) initn: 4520 init1: 2682 opt: 4532 Z-score: 4732.6 bits: 886.6 E(): 0 Smith-Waterman score: 4532; 87.838% identity (95.946% similar) in 740 aa overlap (17-755:111-849) 10 20 30 40 mKIAA1 RLWSCKERSLGRLQLRRKLNVPRKGRA-QTECFNFIRFLQPYNSSH .: . .::.. :::::::::::::::.:: gi|739 LYVGAREALFVFSVEALELQGAISWEAPAEKKAECIQKGKSNQTECFNFIRFLQPYNTSH 90 100 110 120 130 140 50 60 70 80 90 100 mKIAA1 LYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNF ::::::::::::::::.::::::.:.:::::::::::::::::::::::::::::::::: gi|739 LYVCGTYAFQPKCTYIDMLTFTLERGEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNF 150 160 170 180 190 200 110 120 130 140 150 160 mKIAA1 LGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAV ::::::::: :: :::.::::::::::::::::::..:::::::::::::.::::::::: gi|739 LGTEPVILRNMGPHHSMKTEYLAFWLNEPHFVGSAYIPESVGSFTGDDDKVYFFFSERAV 210 220 230 240 250 260 170 180 190 200 210 220 mKIAA1 EYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHTLR :::::.::::::::::::::::::::::.:::::::::::::::::..:::::.:.:::. gi|739 EYDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLVCSAPDWQLYFNQLQALHTLQ 270 280 290 300 310 320 230 240 250 260 270 280 mKIAA1 GASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPVPS ::::::::::::.:::::.:.:::::::::.::.::::::::: ::::::.:::::::: gi|739 EASWHNTTFFGVFRARWGDVDMSAVCEYQLEEIQRVFEGPYKEYREQAQKWGRYTDPVPS 330 340 350 360 370 380 290 300 310 320 330 340 mKIAA1 PRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVV :::::::::::: .:::::::::::::::::::::::.:: :: .:::::::.:::::.: gi|739 PRPGSCINNWHRRHGYTSSLELPDNTLNFIKKHPLMEEQVGPRWNRPLLVKKDTNFTHLV 390 400 410 420 430 440 350 360 370 380 390 400 mKIAA1 ADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKKVL :::: ::::::::::::::: :::::::::: :.:..:::::::::::::::::.:::.: gi|739 ADRVTGLDGATYTVLFIGTGGGWLLKAVSLGSWVHLIEELQVFDQEPVESLVLSRSKKLL 450 460 470 480 490 500 410 420 430 440 450 460 mKIAA1 FAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHVAN ::::::::::: ::::.::: :.::::::::::::.::.:::.:. .:.:::.:.:::: gi|739 FAGSRSQLVQLPLADCVKYRSCADCVLARDPYCAWSVNASRCIAV-GGHSGSLLIQHVAV 510 520 530 540 550 470 480 490 500 510 520 mKIAA1 LDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPGSF ::: .:: : :::: ::::::::.::::::::.::::::::.::::..:::::::::: gi|739 SDTSGICNLRGNKKVRLIPKNITVVAGTDLVLPCRLSSNLAHARWTFGGRDLPAEQPGSF 560 570 580 590 600 610 530 540 550 560 570 580 mKIAA1 LYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLENLG ::: :::::::::: ::.: :.:.:::::.:::::.:::::::: :::::::::::::: gi|739 LYDPRLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLENLG 620 630 640 650 660 670 590 600 610 620 630 640 mKIAA1 LVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFRPG :::::::::::::::::::::::::::::::::::::.::::::::::::::.::::::: gi|739 LVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKAAERTLVYPLELPKEPTSPPFRPG 680 690 700 710 720 730 650 660 670 680 690 700 mKIAA1 PETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRN :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|739 PETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGAPPSPPPGIPGQPLPSPTRLHLGGGRN 740 750 760 770 780 790 710 720 730 740 750 mKIAA1 SNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV :::::::::::::::::: ::::::::::::::::::::::::::::::: gi|739 SNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV 800 810 820 830 840 >>gi|194671303|ref|XP_604387.4| PREDICTED: similar to se (833 aa) initn: 4510 init1: 2685 opt: 4523 Z-score: 4723.3 bits: 884.8 E(): 0 Smith-Waterman score: 4523; 87.197% identity (95.957% similar) in 742 aa overlap (15-755:93-833) 10 20 30 40 mKIAA1 RLWSCKERSLGRLQLRRKLNVPRKGRA-QTECFNFIRFLQPYNS ...: . .::.. :::::::::::::::. gi|194 GLLYVGAREALFAFSVEALELQGVISWEAPVEKKAECIQKGKSNQTECFNFIRFLQPYNT 70 80 90 100 110 120 50 60 70 80 90 100 mKIAA1 SHLYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLN ::::::::::::::::::.::::::.:.:::::::::::::::::::::::::::::::: gi|194 SHLYVCGTYAFQPKCTYIDMLTFTLERSEFEDGKGKCPYDPAKGHTGLLVDGELYSATLN 130 140 150 160 170 180 110 120 130 140 150 160 mKIAA1 NFLGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSER ::::::::::: :: ::..::::::::::::::::::.:::::::.::::::.::::::: gi|194 NFLGTEPVILRNMGPHHAMKTEYLAFWLNEPHFVGSAYVPESVGSYTGDDDKVYFFFSER 190 200 210 220 230 240 170 180 190 200 210 220 mKIAA1 AVEYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHT :::::::.::::::::::::::.:::::::.:::::::::::::::::..:::.:.:.:: gi|194 AVEYDCYAEQVVARVARVCKGDVGGARTLQRKWTTFLKARLVCSAPDWQLYFNRLQALHT 250 260 270 280 290 300 230 240 250 260 270 280 mKIAA1 LRGASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPV :. ::::::::::::.:::::::::::::::::.::.::::::::: ::::::.:::::: gi|194 LQDASWHNTTFFGVFRARWGDMDLSAVCEYQLEEIQKVFEGPYKEYHEQAQKWGRYTDPV 310 320 330 340 350 360 290 300 310 320 330 340 mKIAA1 PSPRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTH :::::::::::::: .::::::::::: :::::::::::.::.:: :::::::::.:.:: gi|194 PSPRPGSCINNWHRRHGYTSSLELPDNILNFIKKHPLMEEQVRPRWGRPLLVKKNANLTH 370 380 390 400 410 420 350 360 370 380 390 400 mKIAA1 VVADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKK .::::: ::::::::::::::::::::::::::::.:..::::.::::::::::::.::: gi|194 LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPVESLVLSRSKK 430 440 450 460 470 480 410 420 430 440 450 460 mKIAA1 VLFAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHV .:::::::::::: ::: ::: :.:::::::::::::.:.:::::. .:.:::.:.::: gi|194 LLFAGSRSQLVQLPPADCMKYRSCADCVLARDPYCAWNANSSRCVAV-GGHSGSLLIQHV 490 500 510 520 530 540 470 480 490 500 510 520 mKIAA1 ANLDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPG . :::..:: : :::: :::::::.::::::::.::::::::.::::..:::::::: gi|194 TVSDTSSICNFRGSKKVRLTPKNITVVAGTDLVLPCRLSSNLAHARWTFGGRDLPAEQPG 550 560 570 580 590 600 530 540 550 560 570 580 mKIAA1 SFLYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLEN :::::. :::::::::: ::.: :.:.:::::.:::::.:::::::: :::::::::::: gi|194 SFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLEN 610 620 630 640 650 660 590 600 610 620 630 640 mKIAA1 LGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFR :::::::::::::::::::::::::::::::::::::::.::::::::::::::.: ::: gi|194 LGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKAAERTLVYPLELPKEPTSTPFR 670 680 690 700 710 720 650 660 670 680 690 700 mKIAA1 PGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGG 730 740 750 760 770 780 710 720 730 740 750 mKIAA1 RNSNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV :::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|194 RNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV 790 800 810 820 830 >>gi|109103896|ref|XP_001100467.1| PREDICTED: semaphorin (833 aa) initn: 4501 init1: 2668 opt: 4512 Z-score: 4711.8 bits: 882.7 E(): 0 Smith-Waterman score: 4512; 87.568% identity (95.135% similar) in 740 aa overlap (17-755:95-833) 10 20 30 40 mKIAA1 RLWSCKERSLGRLQLRRKLNVPRKGRA-QTECFNFIRFLQPYNSSH .: . .::. :::::::::::::::.:: gi|109 LYVGAREALFAFSMEALELQGAISWEAPAEKKTECIQKGKNNQTECFNFIRFLQPYNASH 70 80 90 100 110 120 50 60 70 80 90 100 mKIAA1 LYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNF ::.::::::::::::::::::::.:.:::::::::::::::::::::::::::::::::: gi|109 LYACGTYAFQPKCTYINMLTFTLERGEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNF 130 140 150 160 170 180 110 120 130 140 150 160 mKIAA1 LGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAV :::::.::: :: :::.::::::::::::::::::.:::::::.::::::.:::: :::: gi|109 LGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSLTGDDDKVYFFFRERAV 190 200 210 220 230 240 170 180 190 200 210 220 mKIAA1 EYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHTLR : :::.:::::::::::::::::::::::::::::::::.::::::..:::::.:::::. gi|109 ESDCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAPDWQLYFNQLQAVHTLQ 250 260 270 280 290 300 230 240 250 260 270 280 mKIAA1 GASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPVPS .:::::::::::::::::: ::::::::::.::.::::::::: ::::::.:::::::: gi|109 DTSWHNTTFFGVFQARWGDMYLSAVCEYQLEEIQRVFEGPYKEYREQAQKWGRYTDPVPS 310 320 330 340 350 360 290 300 310 320 330 340 mKIAA1 PRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVV :::::::::::: .:::::::::::::::::::::::.:: :: .:::::::.:::::.: gi|109 PRPGSCINNWHRRHGYTSSLELPDNTLNFIKKHPLMEEQVGPRWSRPLLVKKGTNFTHLV 370 380 390 400 410 420 350 360 370 380 390 400 mKIAA1 ADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKKVL :::: ::::::::::::::::::::::::::::.:..::::.:::::. ::::.::::.: gi|109 ADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMGSLVLAQSKKLL 430 440 450 460 470 480 410 420 430 440 450 460 mKIAA1 FAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHVAN ::::::::::: :::: ::: :.::::::::::::.::::::::. .:.:::.:.::: gi|109 FAGSRSQLVQLPLADCMKYRSCADCVLARDPYCAWSVNTSRCVAV-GGHSGSLLIQHVMI 490 500 510 520 530 540 470 480 490 500 510 520 mKIAA1 LDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPGSF ::: .:: : ::::. :::::::.:::::::::::::::::.::::..:::::::::: gi|109 SDTSGICNLRGSKKVRATPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSF 550 560 570 580 590 600 530 540 550 560 570 580 mKIAA1 LYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLENLG :::. :::::::::: ::.: :.:.:::::.:::::.:::::::: :::::::::::::: gi|109 LYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLENLG 610 620 630 640 650 660 590 600 610 620 630 640 mKIAA1 LVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFRPG :::::::::::::::::::::::::::::::::::::.::::::::::::::.:::::: gi|109 LVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPFRPC 670 680 690 700 710 720 650 660 670 680 690 700 mKIAA1 PETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRN :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRN 730 740 750 760 770 780 710 720 730 740 750 mKIAA1 SNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV :::::::::::::::::: ::::::::::::::::::::::::::::::: gi|109 SNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV 790 800 810 820 830 >>gi|114579013|ref|XP_515634.2| PREDICTED: semaphorin 4C (858 aa) initn: 4474 init1: 2640 opt: 4486 Z-score: 4684.5 bits: 877.7 E(): 0 Smith-Waterman score: 4486; 86.388% identity (95.013% similar) in 742 aa overlap (15-755:118-858) 10 20 30 40 mKIAA1 RLWSCKERSLGRLQLRRKLNVPRKGRA-QTECFNFIRFLQPYNS ...: . .::. :::::::::::::::. gi|114 AKKEAAAEEARVGWGCPALRPEVPISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPYNA 90 100 110 120 130 140 50 60 70 80 90 100 mKIAA1 SHLYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLN :::::::::::::::::::::::::...:::::::::::::::::.:::::::::::::: gi|114 SHLYVCGTYAFQPKCTYINMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSATLN 150 160 170 180 190 200 110 120 130 140 150 160 mKIAA1 NFLGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSER :::::::.::: :: :::.::::::::::::::::::.::::::::::::::.:::: :: gi|114 NFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRER 210 220 230 240 250 260 170 180 190 200 210 220 mKIAA1 AVEYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHT ::: :::.:::::::::::::::::::::::::::::::::.::::.:..:::::.:.:: gi|114 AVESDCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAPNWQLYFNQLQAMHT 270 280 290 300 310 320 230 240 250 260 270 280 mKIAA1 LRGASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPV :. .:::::::::::::.:::: :::.::::::.::.::::::::: :.:::: :::::: gi|114 LQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPV 330 340 350 360 370 380 290 300 310 320 330 340 mKIAA1 PSPRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTH :::::::::::::: .::::::::::: :::.:::::::.:: :: .:::::::.::::: gi|114 PSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH 390 400 410 420 430 440 350 360 370 380 390 400 mKIAA1 VVADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKK .::::: ::::::::::::::::::::::::::::.:..::::.:::::..::::::::: gi|114 LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQSKK 450 460 470 480 490 500 410 420 430 440 450 460 mKIAA1 VLFAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHV .:::::::::::: .::: ::: :.::::::::::::.::::::::. .:.:::.:.::: gi|114 LLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAV-GGHSGSLLIQHV 510 520 530 540 550 560 470 480 490 500 510 520 mKIAA1 ANLDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPG . ::: .:: : :::: :::::::.:::::::::::::::::.::::..:::::::: gi|114 MTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQPG 570 580 590 600 610 620 530 540 550 560 570 580 mKIAA1 SFLYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLEN :::::. :::::::::: ::.: :.:.:::::.:::::.:::::::: :::::::::::: gi|114 SFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLEN 630 640 650 660 670 680 590 600 610 620 630 640 mKIAA1 LGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFR :::::::::::::::::::::::::::::::::::::::.::::::::::::::.::::: gi|114 LGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPFR 690 700 710 720 730 740 650 660 670 680 690 700 mKIAA1 PGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGG : :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGG 750 760 770 780 790 800 710 720 730 740 750 mKIAA1 RNSNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV :::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|114 RNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV 810 820 830 840 850 >>gi|47606208|sp|Q9C0C4.2|SEM4C_HUMAN RecName: Full=Sema (833 aa) initn: 4470 init1: 2636 opt: 4482 Z-score: 4680.5 bits: 876.9 E(): 0 Smith-Waterman score: 4482; 86.119% identity (95.013% similar) in 742 aa overlap (15-755:93-833) 10 20 30 40 mKIAA1 RLWSCKERSLGRLQLRRKLNVPRKGRA-QTECFNFIRFLQPYNS ...: . .::. :::::::::::::::. gi|476 GLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPYNA 70 80 90 100 110 120 50 60 70 80 90 100 mKIAA1 SHLYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLN :::::::::::::::::.:::::::...:::::::::::::::::.:::::::::::::: gi|476 SHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSATLN 130 140 150 160 170 180 110 120 130 140 150 160 mKIAA1 NFLGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSER :::::::.::: :: :::.::::::::::::::::::.::::::::::::::.:::: :: gi|476 NFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRER 190 200 210 220 230 240 170 180 190 200 210 220 mKIAA1 AVEYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHT ::: :::.::::::::::::::::::::::.::::::::::.::::.:..:::::.:.:: gi|476 AVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAMHT 250 260 270 280 290 300 230 240 250 260 270 280 mKIAA1 LRGASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPV :. .:::::::::::::.:::: :::.::::::.::.::::::::: :.:::: :::::: gi|476 LQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPV 310 320 330 340 350 360 290 300 310 320 330 340 mKIAA1 PSPRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTH :::::::::::::: .::::::::::: :::.:::::::.:: :: .:::::::.::::: gi|476 PSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH 370 380 390 400 410 420 350 360 370 380 390 400 mKIAA1 VVADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKK .::::: ::::::::::::::::::::::::::::.:..::::.:::::..::::::::: gi|476 LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQSKK 430 440 450 460 470 480 410 420 430 440 450 460 mKIAA1 VLFAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHV .:::::::::::: .::: ::: :.::::::::::::.::::::::. .:.:::.:.::: gi|476 LLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAV-GGHSGSLLIQHV 490 500 510 520 530 540 470 480 490 500 510 520 mKIAA1 ANLDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPG . ::: .:: : :::: :::::::.:::::::::::::::::.::::..:::::::: gi|476 MTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQPG 550 560 570 580 590 600 530 540 550 560 570 580 mKIAA1 SFLYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLEN :::::. :::::::::: ::.: :.:.:::::.:::::.:::::::: :::::::::::: gi|476 SFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLEN 610 620 630 640 650 660 590 600 610 620 630 640 mKIAA1 LGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFR :::::::::::::::::::::::::::::::::::::::.::::::::::::::.::::: gi|476 LGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPFR 670 680 690 700 710 720 650 660 670 680 690 700 mKIAA1 PGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGG : :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 PCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGG 730 740 750 760 770 780 710 720 730 740 750 mKIAA1 RNSNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV :::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|476 RNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV 790 800 810 820 830 >>gi|119591731|gb|EAW71325.1| sema domain, immunoglobuli (886 aa) initn: 4470 init1: 2636 opt: 4482 Z-score: 4680.1 bits: 876.9 E(): 0 Smith-Waterman score: 4482; 86.119% identity (95.013% similar) in 742 aa overlap (15-755:146-886) 10 20 30 40 mKIAA1 RLWSCKERSLGRLQLRRKLNVPRKGRA-QTECFNFIRFLQPYNS ...: . .::. :::::::::::::::. gi|119 GLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPYNA 120 130 140 150 160 170 50 60 70 80 90 100 mKIAA1 SHLYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLN :::::::::::::::::.:::::::...:::::::::::::::::.:::::::::::::: gi|119 SHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSATLN 180 190 200 210 220 230 110 120 130 140 150 160 mKIAA1 NFLGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSER :::::::.::: :: :::.::::::::::::::::::.::::::::::::::.:::: :: gi|119 NFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRER 240 250 260 270 280 290 170 180 190 200 210 220 mKIAA1 AVEYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHT ::: :::.::::::::::::::::::::::.::::::::::.::::.:..:::::.:.:: gi|119 AVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAMHT 300 310 320 330 340 350 230 240 250 260 270 280 mKIAA1 LRGASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPV :. .:::::::::::::.:::: :::.::::::.::.::::::::: :.:::: :::::: gi|119 LQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPV 360 370 380 390 400 410 290 300 310 320 330 340 mKIAA1 PSPRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTH :::::::::::::: .::::::::::: :::.:::::::.:: :: .:::::::.::::: gi|119 PSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH 420 430 440 450 460 470 350 360 370 380 390 400 mKIAA1 VVADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKK .::::: ::::::::::::::::::::::::::::.:..::::.:::::..::::::::: gi|119 LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQSKK 480 490 500 510 520 530 410 420 430 440 450 460 mKIAA1 VLFAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHV .:::::::::::: .::: ::: :.::::::::::::.::::::::. .:.:::.:.::: gi|119 LLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAV-GGHSGSLLIQHV 540 550 560 570 580 590 470 480 490 500 510 520 mKIAA1 ANLDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPG . ::: .:: : :::: :::::::.:::::::::::::::::.::::..:::::::: gi|119 MTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQPG 600 610 620 630 640 650 530 540 550 560 570 580 mKIAA1 SFLYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLEN :::::. :::::::::: ::.: :.:.:::::.:::::.:::::::: :::::::::::: gi|119 SFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLEN 660 670 680 690 700 710 590 600 610 620 630 640 mKIAA1 LGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFR :::::::::::::::::::::::::::::::::::::::.::::::::::::::.::::: gi|119 LGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPFR 720 730 740 750 760 770 650 660 670 680 690 700 mKIAA1 PGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGG : :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGG 780 790 800 810 820 830 710 720 730 740 750 mKIAA1 RNSNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV :::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|119 RNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV 840 850 860 870 880 >>gi|37182802|gb|AAQ89201.1| SEMA4C [Homo sapiens] (833 aa) initn: 4467 init1: 2636 opt: 4479 Z-score: 4677.4 bits: 876.3 E(): 0 Smith-Waterman score: 4479; 85.984% identity (95.013% similar) in 742 aa overlap (15-755:93-833) 10 20 30 40 mKIAA1 RLWSCKERSLGRLQLRRKLNVPRKGRA-QTECFNFIRFLQPYNS ...: . .::. :::::::::::::::. gi|371 GLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPYNA 70 80 90 100 110 120 50 60 70 80 90 100 mKIAA1 SHLYVCGTYAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLN :::::::::::::::::.:::::::...:::::::::::::::::.:::::::::::::: gi|371 SHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSATLN 130 140 150 160 170 180 110 120 130 140 150 160 mKIAA1 NFLGTEPVILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSER :::::::.::: :: :::.::::::::::::::::::.::::::::::::::.:::: :: gi|371 NFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRER 190 200 210 220 230 240 170 180 190 200 210 220 mKIAA1 AVEYDCYSEQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHT ::: :::.::::::::::::::::::::::.::::::::::.::::.:..:::::.:.:: gi|371 AVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAMHT 250 260 270 280 290 300 230 240 250 260 270 280 mKIAA1 LRGASWHNTTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPV :. .:::::::::::::.:::: :::.::::::.::.::::::::: :.:::: :::::: gi|371 LQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPV 310 320 330 340 350 360 290 300 310 320 330 340 mKIAA1 PSPRPGSCINNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTH :::::::::::::: .::::::::::: :::.:::::::.:: :: .:::::::.::::: gi|371 PSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH 370 380 390 400 410 420 350 360 370 380 390 400 mKIAA1 VVADRVPGLDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKK .::::: ::::::::::::::::::::::::::::.:..::::.:::::..::::::::: gi|371 LVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQSKK 430 440 450 460 470 480 410 420 430 440 450 460 mKIAA1 VLFAGSRSQLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHV .:::::::::::: .::: ::: :.::::::::::::.::::::::. .:.:::.:.::: gi|371 LLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAV-GGHSGSLLIQHV 490 500 510 520 530 540 470 480 490 500 510 520 mKIAA1 ANLDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPG . ::: .:: : :::: :::::::.:::::::::::::::::.::::..:::::::: gi|371 MTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQPG 550 560 570 580 590 600 530 540 550 560 570 580 mKIAA1 SFLYDTGLQALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLEN .::::. :::::::::: ::.: :.:.:::::.:::::.:::::::: :::::::::::: gi|371 TFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLEN 610 620 630 640 650 660 590 600 610 620 630 640 mKIAA1 LGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFR :::::::::::::::::::::::::::::::::::::::.::::::::::::::.::::: gi|371 LGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPFR 670 680 690 700 710 720 650 660 670 680 690 700 mKIAA1 PGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGG : :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 PCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGG 730 740 750 760 770 780 710 720 730 740 750 mKIAA1 RNSNANGYVRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV :::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|371 RNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV 790 800 810 820 830 755 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 15:53:19 2009 done: Sun Mar 15 16:01:23 2009 Total Scan time: 1065.130 Total Display time: 0.350 Function used was FASTA [version 34.26.5 April 26, 2007]