Comparison of KIAA cDNA sequences between mouse and human (KIAA0264)
<<Original sequence data>>
mouse mKIAA0264 (mth02320) length: 5648 bp, CDS: 2001 - 2465
human KIAA0264 (ha07040) length: 2635 bp, CDS: 3 - 1250
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 82 - 2000 334 272 44.9
CDS: 2001 - 2465 351 98 21.8
3'UTR: 2466 - 5651 846 806 48.8
amino acid
CDS: 2001 - 2465 107 42 28.2
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mth02320 1 GGCTGCCTTTGTGTTGATGGGCAAGGCATAGTGTAACATGGGCAAGCCTT 50
ha07040 1 .................................................. 1
51 ----+----*----+----*----+----*----+----*----+----* 100
S R V S F E
mth02320 51 GGTAAAGTGGCCTCTGACCTAGCCCATACTACCAGTAGAGTCTCCTTTGA 100
||| | | |||
ha07040 1 ...............................CCAAGATGGCTGCCTCCAT 19
K M A A S I
101 ----+----*----+----*----+----*----+----*----+----* 150
V Q
mth02320 101 AGTGCTTAGGACCAAAAGTGTTTAGGAGTTCAGATTTTTTAAAATTGTGG 150
|||||
ha07040 20 AGTGC............................................. 24
V R
151 ----+----*----+----*----+----*----+----*----+----* 200
mth02320 151 AATATTTGCACAGTGAGATACATTGGAGAGAGTCAAATGTAAACACAACA 200
ha07040 25 .................................................. 25
201 ----+----*----+----*----+----*----+----*----+----* 250
mth02320 201 TGGTCCATGTTTTATGTATACTTCAGACATACCCTAAGGGTGATTTTTAC 250
ha07040 25 .................................................. 25
251 ----+----*----+----*----+----*----+----*----+----* 300
mth02320 251 ACATTGTGCTTAATTTGTACATGAAGTGTCTCATGTAATGTGGCACTTTC 300
ha07040 25 .................................................. 25
301 ----+----*----+----*----+----*----+----*----+----* 350
mth02320 301 TGCTAGCAGTGTCATGTCAAATAGTTTTAGAGCTTGGGACATTTGGAGTT 350
ha07040 25 .................................................. 25
351 ----+----*----+----*----+----*----+----*----+----* 400
Q *
mth02320 351 TTCAGATTAGGGTTGTTCACCTGTATCTTCTCAGACCCTGTGAACAATGA 400
| |
ha07040 25 ..........................................GGCGCGGG 32
R G
401 ----+----*----+----*----+----*----+----*----+----* 450
L L L A R Q
mth02320 401 CTGCTCCTAGCACGCCACAGACAGCAGCTGCTTGAATATTTACTGCTCAT 450
||||||| || || ||
ha07040 33 ATGCTCCTGGCGCGGCA................................. 49
M L L A R Q
451 ----+----*----+----*----+----*----+----*----+----* 500
A F S P Q C S
mth02320 451 TCAGCTTTTAGTCCCCAGTGCATCCTGATACTGTAGCTGTTGTTTACTCT 500
|| || ||| ||| | |||
ha07040 50 ..AGTGGTTCTTCCTCAGCTC..........................TCT 71
V V L P Q L S
501 ----+----*----+----*----+----*----+----*----+----* 550
K E E K R Y
mth02320 501 AAAGAGGAAAAAAGGTTTCACACAGTGAGATGGCTCAGTGGATAGAGTGC 550
| | ||||| |
ha07040 72 CCTGCAGGTAAAAGAT.................................. 87
P A G K R Y
551 ----+----*----+----*----+----*----+----*----+----* 600
L R S
mth02320 551 TTGCCCTCAGACCCGATGACCTGAGGTCTGTGTGTTTGTGTCTCTCTCTC 600
||||| |||
ha07040 88 ..................ACCTGCTTTCT..................... 98
L L S
601 ----+----*----+----*----+----*----+----*----+----* 650
mth02320 601 TTACACACACACACACACACACACACTCTCTCTCTCTCTCTCTCTCTCTC 650
ha07040 99 .................................................. 99
651 ----+----*----+----*----+----*----+----*----+----* 700
mth02320 651 TCTCCTTCTCTCTCTCTCTCTCTCTCACACTCACACACTCAGACATACTA 700
ha07040 99 .................................................. 99
701 ----+----*----+----*----+----*----+----*----+----* 750
* I F E A S L I C I A S C K
mth02320 701 AACAAATAAATAAATATTTGAAGCCAGCCTGATCTGCATAGCAAGTTGCA 750
| | | || || ||||| | || |||||| |
ha07040 99 ..........TCAGCCTATGTAGACAGCCACAAATGGGAAGCAAGAGAAA 138
S A Y V D S H K W E A R E K
751 ----+----*----+----*----+----*----+----*----+----* 800
E L H N K T F L T K L N *
mth02320 751 AGCCAGCCAGAACTACACAATAAAACTTTTCTTAAAAACAAAATTAAATT 800
| ||||| || | || |||| || ||||
ha07040 139 A.......AGAACATTACTGTCTTGCTGATCTT....GCATCTTTAATGG 177
E H Y C L A D L A S L M D
801 ----+----*----+----*----+----*----+----*----+----* 850
K I S K C K
mth02320 801 GAAAAATAAGTAAGTGTAAGAAAAATAAGTCAGACTTCTTATTTATTCTG 850
|||| | | || | |||
ha07040 178 ATAAAACATTTGAGAGAAAG.............................. 197
K T F E R K
851 ----+----*----+----*----+----*----+----*----+----* 900
mth02320 851 TACCAGACCCACTTTTCAGGTTATTGGTGGGAGACGTGAACTTCCCTAGA 900
ha07040 198 .................................................. 198
901 ----+----*----+----*----+----*----+----*----+----* 950
L T V G F F T L A
mth02320 901 TTTGACTGTCGGCTTTTTTTCAGTTGTAGTTTACTGATCGGCACATTAGC 950
||| |||| | | ||| ||| || |
ha07040 198 .TTGCCTGTTAGTTCTTT.......................AACAATATC 223
L P V S S L T I S
951 ----+----*----+----*----+----*----+----*----+----* 1000
G I K P W V C F L A H T Q K L E W
mth02320 951 AGGCATAAAGCCCTGGGTTTGCTTTCTAGCACATACACAAAAGCTAGAAT 1000
| | | | | ||| || || | | | | | | | ||| |
ha07040 224 ACGGCTTATAGACAACATTTCCTCTCGGGAAGAGATAGATCATGCAGAGT 273
R L I D N I S S R E E I D H A E Y
1001 ----+----*----+----*----+----*----+----*----+----* 1050
F
mth02320 1001 GGTTTTCGTTGGAAAAGTGGCCAGGTCCTTAATTAGAAGTTCTTCCTCCT 1050
|
ha07040 274 ATT............................................... 276
Y
1051 ----+----*----+----*----+----*----+----*----+----* 1100
L F Q D P Q
mth02320 1051 CCGTGCTGTGGAAGCCCACATGGAGTCCTTTTCCAGGATCCACTATTTTC 1100
||||| | || || ||
ha07040 277 .........................ACCTTTACAAGTTTCGAC....... 294
L Y K F R H
1101 ----+----*----+----*----+----*----+----*----+----* 1150
N P K N W G L C S
mth02320 1101 CAAGATGTAGGAAAACCCCAAGAACTGGGGCCTGTGCTCCATAAAGCATG 1150
| | |||||| |||| |||| | |
ha07040 295 ...........ACAGCCCCAACTGCTGGTACCTGAGAAAC.......... 323
S P N C W Y L R N
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mth02320 1151 ACCAGATCTGTGCTTTTAATGCTGCACGGAGCCTCGCTCCCTGGCAGCAG 1200
ha07040 324 .................................................. 324
1201 ----+----*----+----*----+----*----+----*----+----* 1250
Q T I P S F S G Q R P *
mth02320 1201 TTGCGGCTGCAGACCATCCCTAGCTTCTCAGGGCAGAGACCATGAGGGAA 1250
||| |||| | || ||||| | | | |
ha07040 324 .........TGGACTATCCACACCTGGATTAGGCAGTGTCTAAAA..... 359
W T I H T W I R Q C L K
1251 ----+----*----+----*----+----*----+----*----+----* 1300
C G A L E K
mth02320 1251 AGGGCTATAGCTCTTGCCTTGTGTGGGGCATTAGAGAATTACAGCTCCTG 1300
| || ||| ||| ||
ha07040 360 .....................TATGATGCACAAGACAA............ 376
Y D A Q D K
1301 ----+----*----+----*----+----*----+----*----+----* 1350
A Q C S
mth02320 1301 ATGTCTGTGTTCTTTTCAGACTTCCTCCTCTGAGCTCTGAGCTCAGTGTT 1350
||| | | |
ha07040 377 .......................................AGCCCTATATA 387
A L Y T
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mth02320 1351 CAAGGACTGCCCCAGTCACGTTTGTTACTGGTGTGTGGCAGGCCCAGCGA 1400
|
ha07040 388 C................................................. 388
1401 ----+----*----+----*----+----*----+----*----+----* 1450
L L K R L
mth02320 1401 GTCCTGTGGCTTTGCCCTTTTTTTTTTTTTTTCATGTCTTCTCAAAAGGC 1450
||| | || | |
ha07040 389 ....................................CCTTGTAAATAAGG 402
L V N K V
1451 ----+----*----+----*----+----*----+----*----+----* 1500
Q Y T I L P
mth02320 1451 TTCAATTTTATTGACATACAATTTTACACCCTAGGTTGAAAGACACAGTG 1500
|||||| || |||||| |
ha07040 403 TTCAAT.........ATGGAATTTTTC....................... 420
Q Y G I F P
1501 ----+----*----+----*----+----*----+----*----+----* 1550
N L S
mth02320 1501 ACTAAGTGTTTCTGATTGCCTGGTTTGTCTTTAAGAGGCACAAATCTATC 1550
|| || |
ha07040 421 ........................................CAGATAACTT 430
D N F
1551 ----+----*----+----*----+----*----+----*----+----* 1600
K S N L M V E
mth02320 1551 TAAAAGCAACTTAATGGTGGTGCTTACTTTAACAGTGTGAGGAGGCTTCT 1600
|| | ||| ||| || |||
ha07040 431 TACATTCAATTTACTGATGG.............................. 450
T F N L L M D
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mth02320 1601 CTCTGCTGTGCTGTTAGCGTTCTCTCTCCTCTGGGGCAGGGTAAATGTGA 1650
ha07040 451 .................................................. 451
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mth02320 1651 AGCTGGCAGCCTGGGGGCCTCTTTGACGCTCTCAAGTCAGTGTGGGTCCA 1700
ha07040 451 .................................................. 451
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mth02320 1701 GAGTACTCTATTCTCTTCTCTTTTCTGACTGTAAAAGGCTCTGGCTCATT 1750
ha07040 451 .................................................. 451
1751 ----+----*----+----*----+----*----+----*----+----* 1800
N I K N H E K H K V
mth02320 1751 ACCAAAATATAAAAAATCATGAGAAGCACAAAGGAGAAAACCAAAACCAC 1800
| | | | ||| | || || ||||||
ha07040 451 ...ATTCTTTCATAAAGAAAGAAAATTACAAAG................. 480
S F I K K E N Y K D
1801 ----+----*----+----*----+----*----+----*----+----* 1850
S Y I E G I S
mth02320 1801 TTAATGAAATCTCACCACCCAGGAGTCCTTAGTTATATAGAGGGCATTTC 1850
| || | || ||
ha07040 481 ............................ATGCTTTATCTGTGGTTTTTGA 502
A L S V V F E
1851 ----+----*----+----*----+----*----+----*----+----* 1900
V L I F * K Y E I
mth02320 1851 TGTTCTGATTTTTTAAAAATATGAATACCTTTTATTTATAGAATCGGGAT 1900
|| |||| || | |||| |
ha07040 503 GGTCATGATGCAAGAAGCCTTTGAA.......................GT 529
V M M Q E A F E V
1901 ----+----*----+----*----+----*----+----*----+----* 1950
T S T Q F V I F I N L I H W L
mth02320 1901 AACTTCTACACAGTTTGTTATTTTCATAAACTTAATACATGCTTTTGGCT 1950
|||| || || || | || ||| | || ||| ||
ha07040 530 GCCTTCCACCCAACTTCTCTCCCTCTATGTTTTATTTCA.....TTGCCT 574
P S T Q L L S L Y V L F H C L
1951 ----+----*----+----*----+----*----+----*----+----* 2000
S * *
mth02320 1951 GTCATATTTTTAAAAAATCACATTTAGCATGAAGTATCCACGTTTAATAG 2000
| || | ||
ha07040 575 GGCA........................................AAGAAG 584
A K K
2001 ----+----*----+----*----+----*----+----*----+----* 2050
T V I C W E E E R D F G
mth02320 2001 ACAGTGATCTGCTGTATTCTGTTGCAGTGGGAAGAAGAAAGAGACTTTGG 2050
|||| || | |||||||| || || |||||||
ha07040 585 ACAGACTTCAGT...............TGGGAAGAGGAGAGGAACTTTGG 619
T D F S W E E E R N F G
2051 ----+----*----+----*----+----*----+----*----+----* 2100
A S L L L S G L K Q R N T V G L S
mth02320 2051 GGCGTCCCTCTTGCTTTCTGGCCTGAAACAAAGGAACACAGTGGGCCTGA 2100
|| ||||| |||||| | ||||| ||||||| |||| ||||||| | |
ha07040 620 TGCATCCCTTTTGCTTCCAGGCCTAAAACAAAAGAACTCAGTGGGTTTCA 669
A S L L L P G L K Q K N S V G F S
2101 ----+----*----+----*----+----*----+----*----+----* 2150
S Q L Y G Y A L L G K V E L Q R
mth02320 2101 GTTCCCAGCTGTATGGCTATGCACTTCTCGGGAAGGTGGAACTGCAGCGT 2150
|||||||| ||||||||||||||||||| ||||||||||| ||||||
ha07040 670 GTTCCCAGTTGTATGGCTATGCACTTCTTGGGAAGGTGGAGTTGCAGCAA 719
S Q L Y G Y A L L G K V E L Q Q
2151 ----+----*----+----*----+----*----+----*----+----* 2200
G V R A V Y H G M P L M W T P G Y
mth02320 2151 GGGGTGCGGGCTGTATACCACGGCATGCCTCTGATGTGGACACCAGGCTA 2200
||| | |||||||| |||||| |||||||||||| |||| |||||||||
ha07040 720 GGGCTACGGGCTGTGTACCACAACATGCCTCTGATATGGAAACCAGGCTA 769
G L R A V Y H N M P L I W K P G Y
2201 ----+----*----+----*----+----*----+----*----+----* 2250
L D R A L Q V M E R V A S S P E D
mth02320 2201 CCTCGACAGAGCCCTCCAAGTGATGGAGAGGGTGGCCTCCTCCCCTGAAG 2250
||| ||||||||||| ||||||||||||| ||||| ||||||| ||||
ha07040 770 CCTTGACAGAGCCCTTCAAGTGATGGAGAAAGTGGCTGCCTCCCCAGAAG 819
L D R A L Q V M E K V A A S P E D
2251 ----+----*----+----*----+----*----+----*----+----* 2300
L K L G R E V L D V L D G V L K
mth02320 2251 ACCTCAAGCTGGGTAGAGAAGTGCTCGATGTGCTGGATGGAGTCCTGAAG 2300
|| | |||||| ||||||||| ||||||||||||||||| ||| ||||||
ha07040 820 ACATAAAGCTGTGTAGAGAAGCGCTCGATGTGCTGGATGCAGTGCTGAAG 869
I K L C R E A L D V L D A V L K
2301 ----+----*----+----*----+----*----+----*----+----* 2350
V V T S P D E T S E A Q P Q E G
mth02320 2301 GTGGTGACGTCTCCAGATGTCCAGACTTCAGAGGCACAGCCTCAGGAAGG 2350
| |||| || | |||| | ||||||||| ||| | || | |
ha07040 870 GCTCTGACTTCAGCTGATG...GGGCTTCAGAGGAGCAGTCCCAAAATGA 916
A L T S A D G A S E E Q S Q N D
2351 ----+----*----+----*----+----*----+----*----+----* 2400
E D G L G S A N L V E Q L D T E E
mth02320 2351 TGAAGATGGCTTGGGCTCAGCAAACCTGGTGGAGCAGCTAGACACTGAGG 2400
|||||| | ||| |||| ||| |||||||||||| |||||| ||||
ha07040 917 TGAAGACAACCAGGGGTCAGAAAAACTGGTGGAGCAGTTAGACATCGAGG 966
E D N Q G S E K L V E Q L D I E E
2401 ----+----*----+----*----+----*----+----*----+----* 2450
P E Q S K L P R Y L E R F Q V I
mth02320 2401 AACCAGAACAGTCCAAGCTTCCCCGATACCTCGAGCGCTTTCAGGTGATT 2450
|| |||| |||||||||||||| | |||||| || || ||| ||| |
ha07040 967 AAACAGAGCAGTCCAAGCTTCCTCAATACCTGGAACGATTTAAGGCCTTA 1016
T E Q S K L P Q Y L E R F K A L
2451 ----+----*----+----*----+----*----+----*----+----* 2500
R S R N * A S C I S H T Q R H E
mth02320 2451 CGTAGTAGAAACTGAGCCTTTTCCTGCATCAGTCACACACAAAGGCATGA 2500
| | || ||| | ||| | | | || || | | |
ha07040 1017 CATTCTAAGCTTCAAGC...TCTGGGCAAAATTGAGTCAGAAGGTCTTTT 1063
H S K L Q A L G K I E S E G L L
2501 ----+----*----+----*----+----*----+----*----+----* 2550
K L A L R I A V V F L P T
mth02320 2501 AAAACTCGCATTAAGAATTGCAGTTGTGTTCCTTCCCACAGACCGTGGCC 2550
|| || | ||| | || ||||
ha07040 1064 AAGTCTGACCACCCAGCTTGTCAAGGAAAAACTCTCCAC........... 1102
S L T T Q L V K E K L S T
2551 ----+----*----+----*----+----*----+----*----+----* 2600
G K A V D D F M L E L M S
mth02320 2551 TTTTGGGAAAGCAGTGGCATTGTTACGACTTCATGCTTGAGCTGATGTCA 2600
| |||||| || || | || ||||| ||
ha07040 1103 ...CTGTGAAGCAGAGG.......ACATCGCCACCTATGAGCAGAATCTG 1142
C E A E D I A T Y E Q N L
2601 ----+----*----+----*----+----*----+----*----+----* 2650
R Q R L L N
mth02320 2601 CGGTTCCGTTCCCTGGGGCAGCACGGCACCCCAGCGGCTTCTCAACAGCA 2650
| | ||| ||| ||| ||
ha07040 1143 CAG............................CAGTGGCATCTAGAC.... 1160
Q Q W H L D
2651 ----+----*----+----*----+----*----+----*----+----* 2700
F P L R V A S D Q P
mth02320 2651 GCCTGATTCCCACTCAGGGTGGCAAGTGACCAGCCATTTCTCTACACTAC 2700
| || | | || || |||| |
ha07040 1161 ......CTTGTACAGTTGATCCAGAGAGAACAGCAA.............. 1190
L V Q L I Q R E Q Q
2701 ----+----*----+----*----+----*----+----*----+----* 2750
L G Q S Q L Q Q N K T H E
mth02320 2701 ACCAAATGTGCTGGGTCAGTCACAGCTTCAGCAGAGATAAGACTCACGAA 2750
| | | || | | ||| || | || |||| ||
ha07040 1191 ..........CAGAGGGAGCAAGCGAAGCAGGAGT.ACCAGGCTCAGAAA 1229
Q R E Q A K Q E Y Q A Q K
2751 ----+----*----+----*----+----*----+----*----+----* 2800
S A * L A A L
mth02320 2751 TCCTTTGTGGCGCTTAGCTGGCAGCTTTGTGCTGTTCAGCAGGGCCATTA 2800
| || || | || | | || | |||||||
ha07040 1230 GC........AGCAAAGGCATCTGCCTAATAGGGTCCCCCAGGGCC.... 1267
A A K A S A *
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mth02320 2801 GAGACACTGCCTGTGGACAGGTTTCCAGAACAGTGCTGAGCACTCAAACT 2850
ha07040 1268 .................................................. 1268
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mth02320 2851 GTCAGTGAGCTCTCTGTCCCAAATGCTCTGCTGTTTGTGTCAGGGAAGAA 2900
| ||||| || | | || | |
ha07040 1268 .........CCACCTGTCTCACAAGAACTTCACT................ 1292
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mth02320 2901 AATCCCTGAGCCTGCTCTCTGCTTTGTTTCTTGTCTCTTTAATACAAAAA 2950
| ||| | ||| | ||| || ||
ha07040 1293 CAACCCCGTGCCAGGACTCAGCAGTG........................ 1318
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mth02320 2951 GAAGGAAGTACTTTCAGGTTATGATGTCATCATAGGAGCGGGAGAATTCT 3000
| | | | ||| || | ||
ha07040 1319 .........................GCCTGGACAACAGCCTCAGCTTCCT 1343
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mth02320 3001 CCTCCCACGCCTGCTGCTGCACTGTGCCTTTTCACAGCAGGAAGGAGAGC 3050
| |||| | | || | | | ||| |
ha07040 1344 CTACCCA..................TCTTCTTTTCTTAAAGCAGGCTATG 1375
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mth02320 3051 TGGGCTCCTGCCCGTGAGTCTGTCTCTTCTGACCCAGCAATGGCAGGCCT 3100
|| || | | | | | || | | | || ||| || |
ha07040 1376 TGCCCTACATGGCAAGGCACCATGACTGCCCATCGAG..ATGCCAAGAAG 1423
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mth02320 3101 TGCCGTAGCACAGGATCCCATGGTATTTTAGGGTTTTTTCTCCCCAATAC 3150
|| | | | | || |
ha07040 1424 GGCTATGGAA..................................CTATGC 1439
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mth02320 3151 TTCTGAAGGGAAGTCATTCTTAGCTTCTCTCCTGTAATTTGAAACTAAGA 3200
|| | |||| || | | | ||
ha07040 1440 AGGTGGCTAGTGGTCAGACTGAAGTCACCAGCT................. 1472
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mth02320 3201 ATAAAAAGATTGATGTTCCTTGTCATACCCCAAGGACAAAGCAGAGTAGA 3250
ha07040 1473 .................................................. 1473
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mth02320 3251 GAACTTAGACACAGTTCTTTCTCTTAACTTTGCTTGTCAGTGTATAAAAC 3300
ha07040 1473 .................................................. 1473
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mth02320 3301 TTAAAGAAAACAAGAATCACCACACTTGCTGGGCGTGGTGGTGCACGACT 3350
||| || || | || |||| | | | ||| |
ha07040 1473 .....GAATACCTTAAGGAGGACTCTTGAGGCTCATAATGGAG....... 1510
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mth02320 3351 TTAATCCCAGCACTCGGGAGGCAGAGGCAGGAGGATTTCTGAGTTTGAGG 3400
|| | |||| ||| | | |||| |
ha07040 1511 ............TTCCTGGGGCACAGGGA..........TTAGTTATGAG 1538
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mth02320 3401 CCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGA 3450
| | || ||| ||| ||| ||| ||||
ha07040 1539 CATTAAAGTTCCTAAGACCCAGTGACAG............TACTGGGAGA 1576
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mth02320 3451 AACCCTGTCTTGAAAAAACAACATCAACAACAAAACATTAAAAAAAAGAA 3500
||||
ha07040 1577 AACC.............................................. 1580
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mth02320 3501 TGACCACACTGCTGAATGCTGCCTGAGGTTGCTGAGCCACTGTCAGGCGT 3550
||| || ||| || | | ||
ha07040 1581 ........................AAGGCTGAAGAGTCAGGTTGAAGCAC 1606
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mth02320 3551 CAGGTTTGCCTGGGTTTTGTAAATGTTGTACTCAGTTTTGATTGCTTTTT 3600
| || |||| | ||| | ||| |||||
ha07040 1607 AGGCTT...................TTGTTTTTTGTTGTTTTTGTTTTTT 1637
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mth02320 3601 GACTTTTGGCCGTTTTTTGTCCGTTGCGTCTCAGAGGATGGAGACCTTTG 3650
||
ha07040 1638 GA................................................ 1639
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mth02320 3651 TCTTCACTAGCTTCTAGCCCTTTTACTGCCATGGGACACTGTCTGAGCAT 3700
ha07040 1640 .................................................. 1640
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mth02320 3701 CCAAGAAAGAACAGAAACACATGTTTGTAGCCTGCCATCTGTGACCTTAG 3750
ha07040 1640 .................................................. 1640
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mth02320 3751 CTATGTTAGCAGCTGTAAGCCCCCTCCCCCATTTCCTTTATCCTCACAGG 3800
ha07040 1640 .................................................. 1640
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mth02320 3801 AGGCCTGGGCGGGAGAGTCTCGGCTTATGTGACCCAGCAGTGAGCTGGGA 3850
|| || || || ||| |||||| |||
ha07040 1640 ............GACAGAGTCTCATTCTGTCACCCAGGCTGGAG...... 1671
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mth02320 3851 TTTGGACAAAGCCAACCTCCTCACAGTTGAGATTTCCTGGCTTTCTCTTT 3900
|||| | | || |||| || ||
ha07040 1672 .....................TGCAGTGGCGCAATCTTGGC..TCACTGC 1698
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mth02320 3901 GGCCTCAGACTACCTGGAAAATTATGTTAGGAAGAAATGGTTTTCAGTTT 3950
|||| |||| || || ||| |||
ha07040 1699 AACCTCCGACTCCCAGG...........TTCAAGCAAT............ 1725
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mth02320 3951 ACATTTTCTTCCTGTTGCCTGCTTTTCATTAGTCTGAGGTCATCTGTTTG 4000
|| ||| |
ha07040 1726 .......................................TCTCCTGCCTC 1736
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mth02320 4001 GGTCTGTTTTTATAATTAGTCTGCTCCTTAGATCCCATCGGTCTGGCCCC 4050
|| || ||| ||
ha07040 1737 GGCCTCCTTTAGTA.................................... 1750
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mth02320 4051 CTTTGCCGTTCTGCCAGATCCTATGCTGTACGCTAAGTCACCTCGGGGTG 4100
||||
ha07040 1751 ..............................................GGTG 1754
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mth02320 4101 CGAGCACATGTGACTCTCAGCTGCAGCTGGGGTCCTAAATGTCACTCTCT 4150
|| ||| ||| | || ||| | |
ha07040 1755 GGATTACAGGTGCATACCA......................CCACACCTT 1782
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mth02320 4151 GGTGATCTGTGTCTAGAAGCACTTAAATTGATTAATGCTTTTAGTAAGTC 4200
| || | || | ||||||||
ha07040 1783 TCTAATTTTTGCAT........................TTTTAGTAGAGA 1808
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mth02320 4201 TCTGGGCTGCTACACTGACCCTACCAGGCTGCCCTCTCAGACGGAGCTGT 4250
| | | | ||| ||||||| |||
ha07040 1809 T....GGGGTTTCACCATGTTGGTCAGGCTGGTCTC.............. 1840
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mth02320 4251 AAGCAGGCAGGAGGGAAGGGCTGACCTGTGGGGGAGCACAGCAGGTGGAG 4300
| ||||||| | | | |
ha07040 1841 ..............AACCTCCTGACCTCAAGTGATCTGCCCGCCTCAGCC 1876
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mth02320 4301 GCCTACAGTGCTCAGGCACTCTGGAAAGCTGTTTAGCATTAGTGAGAAAT 4350
|| | |||||| | || | || | || | |
ha07040 1877 TCCCAAAGTGCT.............GGGATGATAGGCGTGAGCCACCACA 1913
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mth02320 4351 CCCTGCAATGATTTCCATCTGTTGAAAGGAACCAGGGGAAGTCACTTAAA 4400
||| || | | | || ||||| ||
ha07040 1914 CCCGGCCA..AGCACAGGCTTTTGAATGG..................... 1940
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mth02320 4401 TGAAAAGACGGGACTTCCGAACTTCCTATCCTCCACCATCTTGTCCAGTG 4450
|| ||| ||| | ||
ha07040 1941 ....................TCTCCCTCTCCCCAGCC............. 1957
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mth02320 4451 GCATTCTCACTGCTCAGTTAGGAGCAGGCCTAAGTGGAGACCTCGTGGCT 4500
ha07040 1958 .................................................. 1958
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mth02320 4501 CAAATAAGAACTGAATGACCGTGAAGCCGGAAGTACAGGAGGTGCAGCTG 4550
| ||||| |||| || ||
ha07040 1958 .............................CAGGTACATGAGGCCAAGGTG 1978
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mth02320 4551 CACTGTGTGTGCCAAGGTGGGGTGATGTCGTGTGCGGGGCTGCACTGCTC 4600
||||||
ha07040 1979 AACTGTG........................................... 1985
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mth02320 4601 CCTGGGGTGATGTCGTGTGCCTGGCTGCACTGCTCACACCTTGGTTTAAC 4650
| | | || | |||| ||||
ha07040 1986 CATCCTGAGACCTTGTGTCCCTG........................... 2008
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mth02320 4651 AGCTGAGCAGGAGAGCCCAGCGAGAGGCAGCTGCCCCTGCAGGACAGATG 4700
ha07040 2009 .................................................. 2009
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mth02320 4701 CAGGGCACCTTCCTGCAAGCAGATGGAGCGGCTGTTAGCGGAGGACTCAG 4750
| | |||| ||| ||| ||| || | | | || |
ha07040 2009 ..AGTCTCCTTTCTGAGTGCA.....AGCTGCACTGTGAGCTGGCTGTGG 2051
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mth02320 4751 TTGCTTCTCACTGTCCTCCTTTCTCCTGCCTGTCCCTTACCTTTCGATTT 4800
|| ||| ||| | ||||||| ||| | | | |
ha07040 2052 GATACTCACACATTCCCACATTCTCCTTTCTGCCACATCTC......... 2092
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mth02320 4801 CCCTTTGCTTCCAACAGGCCTCTCGGTCTAAACTGCAGGAGCTGAACAGA 4850
|| | ||| ||| || |
ha07040 2093 .............................GCCCTTCTGGACCTGCACTGG 2113
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mth02320 4851 GTTGAGTCTGAAAGTCTTTTGACTCTGACCACCCAGCTTGTAAAAGAAAA 4900
| |||||
ha07040 2114 G...........................................AGAAAT 2120
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mth02320 4901 ACTCCCCGCCTGTGAGGCCGAGGACCTGGCCACCTACGAGCAGAAACTCC 4950
| | |||| | | ||||| || | | | |||
ha07040 2121 TCAGGACAGGAGTGAACTCAA......GGCCATGAACTCACTGGATTTCC 2164
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mth02320 4951 GTGAGTGGCACCTGGAGCGGGTGCAGTTGATCCAGAGGGAGCAGGAACAG 5000
| | | | || || || ||| | | |
ha07040 2165 ATTTTTAGGCACCCATAGGGATGTTTTT.......AGGATGTAAGTTTCT 2207
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mth02320 5001 AGGGAGAAGGCCAAGCAAGAGTACCAGGCGCTGAGTGCGGCAGAGAAAGC 5050
|||||| || | | || | |
ha07040 2208 GAGGAGAAAGCTA.........................GCTCTAGCATGA 2232
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mth02320 5051 AGCCTGAAGTTCTGTGAGCCACCTCAGTGTTCAGCCAGGACAGCATGGGG 5100
||| | | | | || ||||| ||
ha07040 2233 AGCTTTTTTGGATTGGCTTCTCCATCGTGTT.................GG 2265
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mth02320 5101 CTCCGCCGCTACTGTCCAGTTCTTTTCTTACAGGAAGCTGTGCATAGCCT 5150
| | | |||| || |||| || | || | | |||
ha07040 2266 GGTAACATTTTTTTTCCAATTTTTTTTTTCCCAAAACATCGTCTCAGCTC 2315
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mth02320 5151 GAAAACAAGGATGGCTCTATGCCAAGACACTGTCTGCCCATCTAGATGT. 5199
| | | || ||| ||| | || | |
ha07040 2316 ATTTATCAAGTAGGTAAAATGAGCCTTTTGTGTACACACAGAGGCACATG 2365
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mth02320 5200 ..CAAGGGCCCTGAACTAAGTGACAAACGGTTGGGCTGAAGCCCCCACAC 5247
|| | | | |||| ||| || || | | ||| | |
ha07040 2366 TGCACGCACACACAACTTGTGAACACACATTTCTGTTAAAGAAGTTAGAA 2415
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mth02320 5248 AGTGGAGTCCTGGGTGCAGACTGGGAATATCGGGTGAGCGTGACGGGAAG 5297
| | ||| ||||| | || | | |
ha07040 2416 AAT.GAGAGATGGGTTGGGGCTTGAAGT...................... 2442
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mth02320 5298 CTATAGCTGAAGGGTCGGCTCTGCAGCACGGGTGTTTGAATGATTTCCTG 5347
| || | | | | |||| || | |
ha07040 2443 ................GCATCAGAGGTATGAATGTTGTAAAACTGT.... 2472
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mth02320 5348 CCCTTGGCCATGTGCATGGAGCACCGAGCTTCATGACCAGGTGCTGGTAG 5397
|||| | || |
ha07040 2473 .....................................CAGGAGATGTAAA 2485
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mth02320 5398 ACTCAGAACCACCCACGTTCCAGAACCGGGTGCTTGCTCCTTTCACCCGC 5447
| || || | ||| | | || || | | |
ha07040 2486 ATTC............CTTTCTGAAGTG.....TCTCTTCTGTGAAAGGG 2518
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mth02320 5448 TTCCAGGACTCAGCACCAGTGGCCACATGACCTGCTGTCAGTGTGACACA 5497
||| |||| | || | | | ||
ha07040 2519 TTC......AGAGCAGATTTTGC..............TTACTATGTAGTG 2548
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mth02320 5498 TTTCCACTGTTAACACTGGTCTCATATTCTCCCTGTGCATATGTGCCATA 5547
|| || | ||| |||| | || || | |
ha07040 2549 TTGCCCTTAAGTACAGTGGTGTAATTTTATTC.................. 2580
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mth02320 5548 TATAGCTGGCACCTTCATGGTCTGTCCCCTTCCCATCACTGCTCAGAAGC 5597
|||
ha07040 2581 ...........................................AAGATTG 2587
5601 ----+----*----+----*----+----*----+----*----+----* 5650
mth02320 5598 AGCCTTTTGTATACCTGCCTCCCCAATAAATCCTACCCATGTGGGCTGTT 5647
|| || | ||||| || || | || ||| | |
ha07040 2588 TGCTCTTCTATCAAAAGCCTCTGGAAATAAATGTTCC.....GGGATCAT 2632
5651 --- 5653
mth02320 5648 G.. 5648
|
ha07040 2633 GTT 2635