FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0824.ptfa, 1641 aa vs ./tmplib.26680 library 1767376 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.9942+/-0.00696; mu= 1.9933+/- 0.461 mean_var=319.1495+/-76.947, 0's: 0 Z-trim: 7 B-trim: 0 in 0/36 Lambda= 0.0718 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 41, opt: 29, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4231 ( 1467 res) mfj06028 (1467) 421 59 1.2e-08 mFLJ00201 ( 640 res) mpm06260 ( 640) 376 54 1.7e-07 mKIAA1870 ( 857 res) mtj02754 ( 857) 378 54 1.8e-07 >>mKIAA4231 ( 1467 res) mfj06028 (1467 aa) initn: 400 init1: 126 opt: 421 Z-score: 247.8 bits: 58.6 E(): 1.2e-08 Smith-Waterman score: 492; 30.612% identity (35.433% ungapped) in 588 aa overlap (800-1342:445-997) 770 780 790 800 810 820 mKIAA0 FLVVVHQIRQLFQYQEGVREEQRSPFNDRFPLKRPRYEDSDKPFVDGPASRFAGLD---- : : . .. .: . :: .. : : mKIAA4 RGPPGPAGTNGIPGTRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGE-DGKDGSPG 420 430 440 450 460 470 830 840 850 860 870 mKIAA0 ---TNQRLTALAEDRPL-FDGPGRPSVT--RDGPAKMIFEGPNKLSPR-IDGPP----TP .: : .: : : ::. :. . :: ::. .:: . : : :: mKIAA4 EPGANGLPGAAGERGPSGFRGPAGPNGIPGEKGPPGE-RGGPGPAGPRGVAGEPGRDGTP 480 490 500 510 520 530 880 890 900 910 920 930 mKIAA0 GSLRFDGSPGQMGGGGPMRFEGPQGQLG-GGCPLRFEGPPGPVGTP--LRFEGPIGQGGG :. . : ::. :: : :: :. : .: : :: :: : : . : :: :. :. mKIAA4 GGPGIRGMPGSPGGPGNDGKPGPPGSQGESGRPGP-PGPSGPRGQPGVMGFPGPKGNDGA 540 550 560 570 580 590 940 950 960 970 980 mKIAA0 GGFRFE----GSPSLRFE-GSTGGLRFEGPGGQPVGGLRFEGHRGQP-VGGLR-FEGPHG : : :.:.: :..: .:: : :.: .: : : ::. . : : mKIAA4 PGKNGERGGPGGPGLPGPAGKNGETGPQGPPG-PTGPAGDKGDSGPPGPQGLQGIPGTGG 600 610 620 630 640 650 990 1000 1010 1020 1030 1040 mKIAA0 QP--VGSLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPH--GQPGGGGGIRFEGPLLQQ : :. .:.:. ::. ::.: ::: . : : ::. :: :: . mKIAA4 PPGENGKPGEPGPKGE-VGAPGAPGGKGDSGAPGERGPPGTAGIPGARGGAGPPGPEGGK 660 670 680 690 700 1050 1060 1070 1080 1090 mKIAA0 G-VGMRFEGPHGQS-VAGLR-FEGHNQLGGNLRFEGPHGQPGVGIRFEGPIVQQGGGMRF : .: :: : : ::. . :. :. .: .:.:: : .: : : : mKIAA4 GPAGP--PGPPGASGSPGLQGMPGERGGPGSPGPKGEKGEPG-GAGADG--VPGKDGPR- 710 720 730 740 750 760 1100 1110 1120 1130 1140 1150 mKIAA0 EGPVPGGGLRIEGPLGQGGPRFEGCHSLRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQP ::. : . :: :: : . :: :.:: :: . : .: :: : :. : : mKIAA4 -GPA--GPIGPPGPAGQPGDKGEG-------GSPG----LPGIAGPRGGPGERGEH-GPP 770 780 790 800 1160 1170 1180 1190 1200 mKIAA0 GPQRFDGPPGQQVQP-----------RFDGVPQRFDGPQHQQA-SRFDIPLGLQGTRFDN :: : : :::. .: . .: : :: ... . : :..: : . mKIAA4 GPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPGPAGPTGSSGPAGPPGPQGVKGER-GS 810 820 830 840 850 860 1210 1220 1230 1240 1250 1260 mKIAA0 HPSQRIESFNHSGPYNDPPGNTFNVPSQGLQFQRHEQIFDTPQGPNFNGPHGPGNQNFPN . .: . ::::. : : . . : : :: :. .::: .. . mKIAA4 PGGPGTAGFPGGRGLPGPPGNNGNPGPPGPSGAPGK---DGPPGPAGNSG-SPGNPGIAG 870 880 890 900 910 920 1270 1280 1290 1300 1310 1320 mKIAA0 PINRASGHYFDEKNLQSSQFGNFGNLPTPISVGNIQASQQVLTGVAQPVAFGQ-GQQFLP : . :. ::. ..: : :. : :...... ... . ..: :. : : . mKIAA4 PKGDAGQP--GEKGPPGAQ-GPPGS-PGPLGIAGLTGARGLAGPPGMPGPRGSPGPQGIK 930 940 950 960 970 1330 1340 1350 1360 1370 1380 mKIAA0 VHPQNPGAFIQNPSGGLPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATAQVTEAV . .::: .: : : mKIAA4 GESGKPGASGHNGERGPPGPQGLPGQPGTAGEPGRDGNPGSDGQPGRDGSPGGKGDRGEN 980 990 1000 1010 1020 1030 >>mFLJ00201 ( 640 res) mpm06260 (640 aa) initn: 164 init1: 108 opt: 376 Z-score: 226.8 bits: 53.6 E(): 1.7e-07 Smith-Waterman score: 450; 32.015% identity (41.162% ungapped) in 531 aa overlap (861-1341:19-481) 840 850 860 870 880 890 mKIAA0 TALAEDRPLFDGPGRPSVTRDGPAKMIFEGPNKLSPRIDGPPTPGSLRFDGSPGQMGGGG :.: .:: ::: : : ::. : : mFLJ00 LEMPLPMLPMDLKGEPGPPGKPGPR--GPPGP-----PGFPGKPGTGK 10 20 30 40 900 910 920 930 940 mKIAA0 PMRFEGPQGQLGGGCPLRFE--GPPGPVGTPLRFEGPIGQGGGGGFRFEGSPSLR----F : : .:: : . : : : :: : : : .: : :.: : :..: . mFLJ00 P----GVHGQPGPAGPPGFSRMGKAGPPGLP----GKVGPPGQPGLR--GEPGIRGDQGL 50 60 70 80 90 950 960 970 980 990 mKIAA0 EGSTGGLRFEGPGGQPVGGLRFEGHRGQP-VGGLRFE-GPHGQP--VGS--LRFDNPRGQ .: : . ::.: : : : .: : :.: : ::.:.: :. :. :: :: mFLJ00 RGPPGPPGLPGPSGITVPGK--PGAQGAPGPPGFRGEPGPQGEPGPRGDRGLKGDNGVGQ 100 110 120 130 140 1000 1010 1020 1030 1040 1050 mKIAA0 PVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGGGIRFEGPLLQQGVGMRFE-GPHGQSVA : :: :. : .:: :: : :: : : ..: . . : . . :: : : mFLJ00 P--GL--PGAPGQAGAP----GPPGLPGPAGLGKPGLDG--IPGAPGDKGDSGPPG--VP 150 160 170 180 190 1060 1070 1080 1090 1100 mKIAA0 GLRFEGHNQLGGNLRFEGPHGQPGVGIR-------FEGPIVQQG-GGMRFEGPVPGGGLR : : : : . .:: : :::: .::. .: :.: :: :: mFLJ00 GSRGEP-----GAVGPKGPPGVDGVGIPGAAGVPGPQGPVGAKGEPGLR--GP-PG---- 200 210 220 230 240 1110 1120 1130 1140 1150 1160 mKIAA0 IEGPLGQGGPRFEGCHSLRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQPGPQRFDGPPG . ::.: : : : .. : : : :.:: : .:.:: . :. ::: . :::: mFLJ00 LIGPVGYGMPGKPGPKGDR--GPVGAPGLL----GDRGEPGED-GKPGEQGPQGLGGPPG 250 260 270 280 290 1170 1180 1190 1200 1210 mKIAA0 QQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPS----------QRIESFNH- : :.: : : . : :. : : :. :. .: : mFLJ00 L---PGSAGLPGRRGPPGSKGEVGPGGPPGVPGIRGDQGPNGLAGKPGLPGERGLPGAHG 300 310 320 330 340 350 1220 1230 1240 1250 1260 mKIAA0 ----SGPYNDP-----PGNTFNVPSQGLQFQRHEQIFDTPQGPNFNGPHG-PGNQNFPNP .:: ..: ::. . . : :. . . : :.. :: : :: :. .: mFLJ00 PPGPTGPKGEPGFTGRPGGPGVAGALG---QKGD--LGLPGQPGLRGPSGIPGLQGPAGP 360 370 380 390 400 410 1270 1280 1290 1300 1310 1320 mKIAA0 INRASGHYFDEKNLQSSQFGNFGNLPTPISVGNI----QASQQVLTGV-AQPVAFGQ-GQ :. ..: . . :. : :: : . :.. .:. :: ..: : : mFLJ00 IG--------PQGLPGLK-GEPG-LPGPPGEGKVGEPGSAGPTGPPGVPGSPGLTGPPGP 420 430 440 450 460 1330 1340 1350 1360 1370 1380 mKIAA0 QFLPVHPQNPGAFIQNPSGGLPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATAQV : : :::. .. .:: mFLJ00 PGPPGPPGAPGALDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTS 470 480 490 500 510 520 >>mKIAA1870 ( 857 res) mtj02754 (857 aa) initn: 265 init1: 129 opt: 378 Z-score: 226.5 bits: 53.9 E(): 1.8e-07 Smith-Waterman score: 443; 31.376% identity (38.776% ungapped) in 545 aa overlap (842-1358:63-531) 820 830 840 850 860 mKIAA0 PFVDGPASRFAGLDTNQRLTALAEDRPLFDGPGRPSVTRDGPAKMIFEGPNKLSPRID-- :: : :::: .: . :. :. mKIAA1 GGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGP----DGPAGE--QGSKGLKGRVGPR 40 50 60 70 80 870 880 890 900 910 920 mKIAA0 G-PPTPGSLRFDGSPGQMGGGGPMRFEGPQGQLGG-GCPLR--FEGPPGPVGTPLRFEGP : : ::. : :. :. : . . ::.: :. : : . .:: :::: : .. :: mKIAA1 GRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEM-GP 90 100 110 120 130 140 930 940 950 960 970 980 mKIAA0 IGQGGGGGFRFEGSPSLRFEGSTGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQ : :. : :.: :..: :: : : : . :.::.: :: :: :: mKIAA1 KGPPGA-----VGEPGL--PGDSGMKGDLGPLGPP-GEQGLIGQRGEP--GL--EGDHG- 150 160 170 180 190 990 1000 1010 1020 1030 1040 mKIAA0 PVGSLRFDNPRGQPVGGLRFEGGHGPSGA-AIR-FDGPHGQPGGGGGIRFEGPLLQQGVG ::: . . ::.: : .: :: .: ... :: : :: : :: .:: mKIAA1 PVGPDGLKGDRGDP-GP---DGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGE- 200 210 220 230 240 1050 1060 1070 1080 1090 mKIAA0 MRFEGPHGQSVAGLRFEGHNQLGGNLRFEGPHGQPGV----GIRFE-GPIVQQGG-GMRF .: .: . : .::. :.. . : : ::. : : :: : : . mKIAA1 ---KGQRGAKGA----KGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQG 250 260 270 280 290 300 1100 1110 1120 1130 1140 mKIAA0 EGPVPG--GGLRIEGPLGQGGPRFE-GCHSL--RFDGQPGQPS-LLPRFD-GLHGQPG-P : . : : : :::: ::. : : .. . .: :: :. : : : .:.:: : mKIAA1 EPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEPGDP 310 320 330 340 350 360 1150 1160 1170 1180 1190 1200 mKIAA0 RFERTGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQ . :: : : . : :::: :: : :. ::. .. : .: . ..:.. mKIAA1 GYP--GQEGVQGLRGEPGQQGQPGHPG-PRGRPGPKGSK--------GEEGPK--GKPGK 370 380 390 400 1210 1220 1230 1240 1250 1260 mKIAA0 RIESFNHSGPYNDPPGNTFNVPSQGLQFQRHEQIFDTPQGP-NFNGPHGP-GNQNFPNPI .:: : .:::: . :.: . .::.: :....:. mKIAA1 -------AGP----SGRR---GTQGLQG------LPGPRGVVGRQGPEGTAGSDGIPGRD 410 420 430 440 1270 1280 1290 1300 1310 1320 mKIAA0 NRASGHYFDEKNLQSSQFGNFGNLPTPISVGNIQASQQV--LTGVAQPVAFGQGQQFLPV .: :. :. :: :. : :.. .. ... : : :. : .: .:.. :: mKIAA1 GRP-GYQGDQ--------GNDGD-PGPVGPAGRRGNPGVAGLPGAQGPPGF-KGESGLPG 450 460 470 480 490 1330 1340 1350 1360 1370 1380 mKIAA0 HPQNPGAFIQNPSGGLP--KAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATAQVTEA . :: . . ::: .. : .. . : .:. mKIAA1 QLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQG 500 510 520 530 540 550 1390 1400 1410 1420 1430 1440 mKIAA0 VAQPPPEEDEDQNEDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDV mKIAA1 PRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPW 560 570 580 590 600 610 1641 residues in 1 query sequences 1767376 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:29:39 2006 done: Mon Mar 27 10:29:41 2006 Scan time: 1.280 Display time: 0.230 Function used was FASTA [version 3.4t11 Apr 17, 2002]