FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1451.ptfa, 429 aa vs ./tmplib.26680 library 1768588 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.0912+/-0.0046; mu= 13.2592+/- 0.307 mean_var=116.6412+/-27.283, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.1188 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1534 ( 493 res) mph00515 ( 493) 794 147 2.8e-36 mKIAA0772 ( 324 res) mib22030 ( 324) 258 55 9.6e-09 mKIAA4128 ( 1002 res) mbf00283 (1002) 263 56 1e-08 mKIAA4220 ( 516 res) mia04077 ( 516) 247 53 4.7e-08 >>mKIAA1534 ( 493 res) mph00515 (493 aa) initn: 1250 init1: 772 opt: 794 Z-score: 743.7 bits: 146.9 E(): 2.8e-36 Smith-Waterman score: 1278; 44.789% identity (53.298% ungapped) in 451 aa overlap (1-429:93-493) 10 20 30 mKIAA1 RLKKVVKWYLSGFYKKPKGLKKPYNPILGE :.: :..::::::::::::.:::::::::: mKIAA1 EPRSFLGKLSDYYYHGDLLSRAAAEDDPYCRMKLVLRWYLSGFYKKPKGIKKPYNPILGE 70 80 90 100 110 120 40 50 60 70 80 90 mKIAA1 TFRCLWIHPRTNSKTFYIAEQVSHHPPISAFYVSNRKDGFCLSGSILAKSKFYGNSLSAI :::: :.::.:::.:::::::::::::.:::::::::::::.:::: ::::::::::::. mKIAA1 TFRCRWLHPQTNSHTFYIAEQVSHHPPVSAFYVSNRKDGFCMSGSITAKSKFYGNSLSAL 130 140 150 160 170 180 100 110 120 130 140 150 mKIAA1 LEGEARLTFLNRGEDYVMTMPYAHCKGILYGTMTLELGGTVNITCQKTGYSAILEFKLKP :.:.:.:::::: :.:..:::::::.::::::::.:::: :. mKIAA1 LDGKAKLTFLNRKEEYTLTMPYAHCRGILYGTMTMELGGKVD------------------ 190 200 210 220 160 170 180 190 200 210 mKIAA1 FLGSSDYVNQISGKLKLGKEVLATLEGHWDSEVFINDKKTDNSEIFWNPTPDIKQWRLIR :::..... ..:.::.:. .... :: : mKIAA1 --------------------------------VFIKEESSGGTELFWTPSEEVRRQRLKR 230 240 250 220 230 240 250 260 270 mKIAA1 HTVKFEEQDDFESEKLWQRVTKAINAKDQTEATQEKYVLEEAQRQAARDRKTKTQEWVCK ::: .:::...:::.:::.::.:: :: .::::: :::::::: ::... . : . mKIAA1 HTVLLEEQSELESERLWQHVTRAIREGDQHKATQEKSVLEEAQRQRAREHQQSLTPWKPQ 260 270 280 290 300 310 280 290 300 310 320 mKIAA1 LFELDPLTGEWHYKFSDTRPWDPLNDMIQFEKDGVIQT----KVKHRTPMVSVPKMKHKP :: ::::: ::.:.. : :::::.:. :.:.::...: .. .: ... : .:: mKIAA1 LFLLDPLTQEWRYRYEDLSPWDPLKDIAQYEQDGILHTLQRETMSGQTTFLGSPDSRHKR 320 330 340 350 360 370 330 340 350 360 370 mKIAA1 TRQQKKVVKGYSSP--EPDIQDSSGSEAQSV-------------KPSTRRKKGID-LGDI ..... :. ..: . .. .:::: .: .: : .. . : . mKIAA1 PSSDRRLRKASDQPSGHSQVTESSGSTPESCPDLSDEDFVPGGESPCPRCRREVHRLKML 380 390 400 410 420 430 380 390 400 410 420 mKIAA1 QSSIESIKQTQEEIKRNIMALRNHLLSS--TPATDYFLQQKDYFVIFLLILLQVIINFIF : .. ::...:.:..:.. .. . . . .:: . . . ...:.. ... :..::.:. mKIAA1 QEAVLSIQEAQQELHRHLSTMLSSTVRAGQAPAPSLLQNPRSWFLLCIFLTCQLFINYIL 440 450 460 470 480 490 mKIAA1 K : mKIAA1 K >>mKIAA0772 ( 324 res) mib22030 (324 aa) initn: 315 init1: 245 opt: 258 Z-score: 249.4 bits: 54.8 E(): 9.6e-09 Smith-Waterman score: 261; 26.667% identity (34.043% ungapped) in 300 aa overlap (47-283:11-308) 20 30 40 50 60 70 mKIAA1 PKGLKKPYNPILGETFRCLWIHPRTNSKTFYIAEQVSHHPPISAFYVSNRKDGFCLSGSI .:.::::::::::::: . .. : . ::: mKIAA0 ELIREDLGFRFISEQVSHHPPISAFYSEGLNQDFRFHGSI 10 20 30 40 80 90 100 110 120 130 mKIAA1 LAKSKFYGNSLSAILEGEARLTFLNRGEDYVMTMPYAHCKGILYGTMTLELGGTVNITCQ : ::.:.:. : .: : .:...: :. : : .... : . .: : :.:. . mKIAA0 YPKLKFWGKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVILGQLWIEQYGIVEIVNH 50 60 70 80 90 100 140 150 160 170 180 mKIAA1 KTGYSAILEFKLKPFLGSSDYVNQISGKLK-LGKEVLATLEGHWDS----------EVFI .:: . ::.:: ..:. .... : .. ... : . :.: : : mKIAA0 RTGDKCILHFKPCGLFGKE--LHRVEGYIQDKNRKKLFIMYGKWTECLWGIDPASYESFK 110 120 130 140 150 190 200 210 mKIAA1 N-DKKTD--------------NSEIFWNPTPDIK--------------QWRLIRHTVKFE . .:. : ::.. . . :. ::. . . mKIAA0 KQEKRGDQARKAKMDDGPEKANSDVPGDVADDVPVAQETVQVIPGSKLLWRINSRPPNSA 160 170 180 190 200 210 220 230 240 250 mKIAA1 EQDDFES-----EKLWQRVTKAINAKD--------------QTEATQEKYVLEEAQRQAA .. .: : ..: . . :.. : . :.::: ::: ::.: mKIAA0 QMYNFTSFTVSLNELESGMEKTLPPTDCRLRPDIRGMENGNMDLASQEKERLEEKQREAR 220 230 240 250 260 270 260 270 280 290 300 310 mKIAA1 RDRKTKTQEWVCKLFEL--DPLTG--EWHYKFSDTRPWDPLNDMIQFEKDGVIQTKVKHR ..: . :: . : .: :: .: : mKIAA0 KERAKEDAEWRTRWFSPGNNPYTGAPDWLYAGHYFERNFSDCPDIY 280 290 300 310 320 >>mKIAA4128 ( 1002 res) mbf00283 (1002 aa) initn: 176 init1: 84 opt: 263 Z-score: 248.7 bits: 56.3 E(): 1e-08 Smith-Waterman score: 263; 26.132% identity (28.626% ungapped) in 287 aa overlap (1-273:692-967) 10 20 mKIAA1 RLKKVVKWYLSGFYKKP-KGLKKPYNPILG :. :. . .::. . .. .::.::.:: mKIAA4 EPLNTLQHLCEEMEYSELLDKASETDDPYERMVLVAAFAVSGYCSTYFRAGSKPFNPVLG 670 680 690 700 710 720 30 40 50 60 70 80 mKIAA1 ETFRCLWIHPRTNSKTFYIAEQVSHHPPISAFYVSNRKDGFCLSGSILAKSKFYGNSLSA ::..:. : .. ...::::::::::: . ... : . .: :.::.:.:. mKIAA4 ETYECI----REDKGFRFFSEQVSHHPPISACHCESKN--FVFWQDIRWKNKFWGKSMEI 730 740 750 760 770 90 100 110 120 130 140 mKIAA1 ILEGEARLTFLNRGEDYVMTMPYAHCKGILYGTMTLELGGTVNITCQKTGYSAI-LEFKL . : .:. . :. :: . . ..:: : .: : :.. :.. : : mKIAA4 LPVGTLNVTLPKYGDYYVWNKVTTCIHNILSGRRWIEHYGEVTLRNTKSSVCICKLTFVK 780 790 800 810 820 830 150 160 170 180 190 200 mKIAA1 KPFLGSSDYVNQISGKL--KLGKEVLATLEGHWDSEVFINDKKTDNSEIFWNPTPDIKQW . .:. ::...: . . :: :. : :.: .. . . ... .: : .. mKIAA4 VNYWNSN--VNEVQGVVIDQEGK-VVHRLFGKWHEGLYCG--VAPSAKCIWRPGSLPTNY 840 850 860 870 880 890 210 220 230 240 250 mKIAA1 RLI----RHTVKFEEQDDFESEKL------WQRVTKAINAKDQTEATQEKYVLEEAQRQA .: : .:...: : .. : .. . .. . :. :: .:: ::. mKIAA4 ELYYGFTRFAVELNELDPVLKDLLPPTDARFRPDQRFLEEGNLEAAAAEKQRVEELQRSR 900 910 920 930 940 950 260 270 280 290 300 310 mKIAA1 ARDRKTKTQEWVCKLFELDPLTGEWHYKFSDTRPWDPLNDMIQFEKDGVIQTKVKHRTPM : . .. : . :.:. mKIAA4 RRYMEENNLEHIPKFFKKVIDANQREAWVSNDTYWELRKDPGFSKVDSPVLW 960 970 980 990 1000 >>mKIAA4220 ( 516 res) mia04077 (516 aa) initn: 176 init1: 76 opt: 247 Z-score: 237.0 bits: 53.2 E(): 4.7e-08 Smith-Waterman score: 266; 26.027% identity (29.344% ungapped) in 292 aa overlap (22-287:202-486) 10 20 30 40 50 mKIAA1 RLKKVVKWYLSGFYKKPKGLKKPYNPILGETFRCLWIHPRTNSKTFY-IAE ::.::.:::::. : . . . : : mKIAA4 AAKCENSLEQLCYVAAFTVSSYSTTVFRTSKPFNPLLGETFEL----DRLEENGYRSICE 180 190 200 210 220 60 70 80 90 100 110 mKIAA1 QVSHHPPISAFYVSNRKDGFCLSGSILAKSKFYGNSLSAILEGEARLTFLNRGEDYVMTM ::::::: .: .. . :.:. : : ::: :. :: . : . : . :. :. mKIAA4 QVSHHPPAAAHHAES-KNGWTLRQEIKITSKFRGKYLSIMPLGTIHCIFHSTGHHYTWKK 230 240 250 260 270 280 120 130 140 150 160 mKIAA1 PYAHCKGILYGTMTLELGGTVNITCQKTGYSAILEFKLKPFLGSSDYVNQISGKLK--LG . ..:. : . .. .: ..:. .::: . :.: .. : : . ...:.. : mKIAA4 VTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYF-SRDVARKVTGEVTDPSG 290 300 310 320 330 340 170 180 190 200 mKIAA1 KEVLATLEGHWDSEV--FI---------NDKKT------DNSEIFW--NPTP----DIKQ : .: : : :: .. : .: . :. ..: :: : .. mKIAA4 KVHFALL-GTWDEKMDCFKVQAASGENGGDARQRGHEAEDSRVMLWKRNPLPKNAENMYY 350 360 370 380 390 400 210 220 230 240 250 260 mKIAA1 WRLIRHTVKFEEQDDFESEKLWQRVTKAINAKDQTEATQEKYVLEEAQRQAARDRKTKTQ . . :.. : ... . . .. ::. :: ::: :: . . :.... mKIAA4 FSELALTLNAWEGGTAPTDSRLRPDQRLMENGRWDEANAEKQRLEEKQRLSRKKREAEAA 410 420 430 440 450 460 270 280 290 300 310 320 mKIAA1 EWVCKLFELDPLTGEWHYKFSDTRPWDPLNDMIQFEKDGVIQTKVKHRTPMVSVPKMKHK . . :: . : . .: mKIAA4 KATEDGTPHDPYKALWFERKKDPVTRELTHIYSGEYWECKEKQDWGSCPDIF 470 480 490 500 510 429 residues in 1 query sequences 1768588 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:45:16 2006 done: Mon Mar 27 10:45:17 2006 Scan time: 0.630 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]