FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00334.ptfa, 835 aa vs ./tmplib.26680 library 1768182 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.6506+/-0.00383; mu= 17.1755+/- 0.255 mean_var=80.1282+/-18.160, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.1433 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1492 ( 717 res) mbr03180 ( 717) 249 62 3.7e-10 >>mKIAA1492 ( 717 res) mbr03180 (717 aa) initn: 332 init1: 148 opt: 249 Z-score: 274.8 bits: 61.6 E(): 3.7e-10 Smith-Waterman score: 464; 24.203% identity (29.663% ungapped) in 690 aa overlap (154-835:132-702) 130 140 150 160 170 180 mFLJ00 KICPADPAFFSFINNSDLWVANIETGEERRLTFCHQGSAGVLDNPKSAGVATFVIQEEF- : . .:. :.. : :.: .. .::. mKIAA1 QYAAWGVQGQQLIYIFENNIYYQPDIKSSSLRLTSSGKEGIIFN----GIADWLYEEELL 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 DRFTGCWWCPTASWEGSEGLKTLRILYEEVDESEVEVIHVP--SPALEERKTDSYRYPRT . :: : .: :. . ...: : . .: . :: :. .: ::.. mKIAA1 HSHIAHWWSP----DGE------RLAFLMINDSLVPNMIIPRFTGALYP-KAKQYPYPKA 160 170 180 190 200 250 260 270 280 290 mFLJ00 GSKNPKIALKLAELQTDHQGKIVSSCEKELVQPFSSLFPKVEY-IARAGWTRDGKYAWAM :. ::.. : ...: . ::. : ..: . :: :. . :. . . . . mKIAA1 GQANPSVKLYVVNLYGPTH-------TLELMPP--DIFKSREYYITMVKWVSNTRTV-VR 210 220 230 240 250 300 310 320 330 340 350 mFLJ00 FLDRPQQRLQLVLLPPALFIPAVESEAQRQAAARAVPKNVQPFVIYEEVTNVWINVHDIF .:.:::. :.: :. : .: :: ....:.. .. mKIAA1 WLNRPQNISILTL-----------CESTTGACSRK----------YEMTSDTWLSKQN-E 260 270 280 290 360 370 380 390 400 410 mFLJ00 HPFPQAEGQQDFCFLRANECKTG-FCHLYRVTVELKTKDYDWTEPLSPTEDEFKCPIKEE .: . .:.. : . ... : : :. :. :.. . ... mKIAA1 EPVFSRDGSKFFMTVPVKQGGRGEFHHIAMFLVQSKSE---------------QITVRH- 300 310 320 330 420 430 440 450 460 470 mFLJ00 VALTSGEWEVLSRHGSKIWVNEQTKLVYFQGTKDTPLEHHLYVVSYESAGEIVR-LTTLG ::::.:::. . .: :. .:: .:...: ..:: .: : : . : . . mKIAA1 --LTSGNWEVIR----ILAYDETTQKIYFLSTESSPQGRQLYSASTE--GLLNRDCISCN 340 350 360 370 380 390 480 490 500 510 520 530 mFLJ00 FFH-SCSM-SQSFDMFVSHYSSVSTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAANCPP :.. .:.. . ::. . .:. : : : .: :.: . :.:. . mKIAA1 FMKEDCTYFDASFSPMNQHFLLFCEGPKVPVVSLH-ITDNPSRYFLLENNSVMKETIQKK 400 410 420 430 440 540 550 560 570 580 590 mFLJ00 DYVPPEIFHFHTRADVQLYGMIYKPHTLQPGRKHPTVLFVYGGPQVQLVNNSFKGIKYLR . : .: : .: .. :. .. .. .:.. : :.:...:. . . mKIAA1 KLAKRETRILHID-DYELPLQLSFPKDFMEKNQYALLLIMDEEPGGQMVTDKFH-VDWDS 450 460 470 480 490 500 600 610 620 630 640 650 mFLJ00 LNTLASLGYAVVVIDGRGSCQRGLHFEGALKNQMGQVEIEDQVEGLQYVAEKYGFIDLSR . . . . :. .::::: .::. .. ..:.:: .::: ...:. : .:: .: mKIAA1 V-LIDTDNVIVARFDGRGSGFQGLKVLQEIHRRIGSVEAKDQVAAVKYLL-KQPYIDSKR 510 520 530 540 550 560 660 670 680 690 700 710 mFLJ00 VAIHGWSYGGFLSLMGLIHKPQVVQAAPRGRVPLLIACHHRPQDGIRQQLYVGGQARDPR ..: : .:::... : .... . .. : mKIAA1 LSIFGKGYGGYIASM-------ILKSDEK-----FFKC---------------------- 570 580 590 720 730 740 750 760 770 mFLJ00 LGGAEVAIAGAPVTVWMAYDTGYTERYMDVPENNQQGYEAGSVALHVEKLPNEPNRLLIL :: :: :.. : ....:::. .: .... :.:.:: ... : .: :::. mKIAA1 --GAVVA----PISDMKLYASAFSERYLGMPSKEESTYQASSVLHNIHGLKEE--NLLII 600 610 620 630 640 780 790 800 810 820 830 mFLJ00 HGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCRESGEHYEVTLLHFLQEHL :: : .::: :. :...::.:: : ::.::.: . : . : .:. :.:.:... : mKIAA1 HGTADTKVHFQHSAELIKHLIKAGVNYTLQVYPDEGYHISDK-SKHHFYSTILRFFSDCL 650 660 670 680 690 700 mKIAA1 KEEVSVLPQEPEEDE 710 835 residues in 1 query sequences 1768182 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:09:27 2006 done: Mon Mar 27 10:09:28 2006 Scan time: 0.950 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]