Comparison of KIAA cDNA sequences between mouse and human (FLJ00334)

<<Original sequence data>>

mouse  mFLJ00334 (mth00885)     length:   5367 bp, CDS:  2298 -  4805
human     (sj04320)     length:   4257 bp, CDS:     2 -  1939

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:     25 -  2309      86       51      37.2
  CDS:   2310 -  4118    1441      281      16.3
3'UTR:   4119 -  6411     950      386      28.9

amino acid

  CDS:   2310 -  4118     523       80      13.3
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
                                        V  W  V  W  T  Q  G  T  Y
mth00885     1 TTAGGCCACCATCCAAGGTGACTGAGTGTGGGTGTGGACCCAGGGCACCT 50
                                          |||||   ||  || | ||| | 
sj04320      1 ........................CTCGTGGGACGGGCTCCGGAGCATCA 26
                                        S  W  D  G  L  R  S  I  I

            51 ----+----*----+----*----+----*----+----*----+----* 100
                 H                                               
mth00885    51 ACCATGCTGGGGGCTGGGCAGGGTGACCAGTCAAAGAGTGCAATGTGTGT 100
                |||                                              
sj04320     27 TCCA.............................................. 30
                 H                                               

           101 ----+----*----+----*----+----*----+----*----+----* 150
mth00885   101 GTGTGAGGACAGAGCCCTTTGGTAGGTCAGGCAGCAGAGGCAGAGTAAGG 150
                                                                 
sj04320     31 .................................................. 31

           151 ----+----*----+----*----+----*----+----*----+----* 200
mth00885   151 GCTATTAGCGTTCGGCTCTGCCCCCACCCTTGCCTTCAGTGCTTGGCATT 200
                                                                 
sj04320     31 .................................................. 31

           201 ----+----*----+----*----+----*----+----*----+----* 250
mth00885   201 GTGGGTGTGCTGCCAGCACTGAAGGGCCATCCAGGAAGGCACTGGCTTGA 250
                                                                 
sj04320     31 .................................................. 31

           251 ----+----*----+----*----+----*----+----*----+----* 300
mth00885   251 GCCATTGGTGAAATTGCTTGTTAGTCAGCTGTGGAGGGGAGGTGGCTTTG 300
                                                                 
sj04320     31 .................................................. 31

           301 ----+----*----+----*----+----*----+----*----+----* 350
mth00885   301 ATGTCCTTGGCATAGGCGTACTTTGTTGGACTTCCTGTTCAGAACAGGAC 350
                                                                 
sj04320     31 .................................................. 31

           351 ----+----*----+----*----+----*----+----*----+----* 400
mth00885   351 AGTAGTGTTCCAGAGCACAGGCCACTGATCCCCACTAGCCCAGTGTAGGA 400
                                                                 
sj04320     31 .................................................. 31

           401 ----+----*----+----*----+----*----+----*----+----* 450
mth00885   401 CCGAGGGACAATTCACACCTCTGAATGTCTCACTTCCTACATTTCTTAAT 450
                                                                 
sj04320     31 .................................................. 31

           451 ----+----*----+----*----+----*----+----*----+----* 500
mth00885   451 TGTTGTGTGTGGAGGTTCATGTGCTATGGCACCTGTGTGGAAAGTACATT 500
                                                                 
sj04320     31 .................................................. 31

           501 ----+----*----+----*----+----*----+----*----+----* 550
mth00885   501 GGTTATGGCACATGTGTGGGCATGTATGTAGAGTTACATATGCTTTGGCT 550
                                                                 
sj04320     31 .................................................. 31

           551 ----+----*----+----*----+----*----+----*----+----* 600
mth00885   551 TGTGTGTGGGGGCACATATGCTATGTCACGTGTGTGAAGGTCAGATGACA 600
                                                                 
sj04320     31 .................................................. 31

           601 ----+----*----+----*----+----*----+----*----+----* 650
mth00885   601 GCTTATGGGAGTTTGTTACTCTCCTTATATCATGTGGGTCCCAGGGCTCA 650
                                                                 
sj04320     31 .................................................. 31

           651 ----+----*----+----*----+----*----+----*----+----* 700
mth00885   651 AACGCAGGTTATCAGTCTTGGTGGTTGGTGCCTTTACTCACTGGGTCCTC 700
                                                                 
sj04320     31 .................................................. 31

           701 ----+----*----+----*----+----*----+----*----+----* 750
mth00885   701 TCATTGTGTCACACTCTTAAAAGTGTGCCGCCCAATATCACATGCTTTAG 750
                                                                 
sj04320     31 .................................................. 31

           751 ----+----*----+----*----+----*----+----*----+----* 800
mth00885   751 TCCCAACTCTCAGGAGAGGCAGGCAGATTTCTGTGAGTTCAAGGCCAGCC 800
                                                                 
sj04320     31 .................................................. 31

           801 ----+----*----+----*----+----*----+----*----+----* 850
mth00885   801 AAGTTTACCTATGAGTTACAGGCCATCCTCAGCTACGTAAAACGTTCAAG 850
                                                                 
sj04320     31 .................................................. 31

           851 ----+----*----+----*----+----*----+----*----+----* 900
mth00885   851 GCCAGCCTGGTGTACATATCGAGTTCCAGGACAGCCTAGGCTACGTAGCG 900
                                                                 
sj04320     31 .................................................. 31

           901 ----+----*----+----*----+----*----+----*----+----* 950
mth00885   901 AGTTCCAGGACACACCGTGACCCTGTCACAGAAAACCAAAATAAAACCAG 950
                                                                 
sj04320     31 .................................................. 31

           951 ----+----*----+----*----+----*----+----*----+----* 1000
                       G  S  C  R  Y                             
mth00885   951 ACAGTCCTGGCAGCTGCAGATATGGAGTAAGGCAGAGGTCATGCATTCTG 1000
                       |||||| |||  ||                            
sj04320     31 .......CGGCAGCCGCAAGTA............................ 45
                       G  S  R  K  Y                             

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
mth00885  1001 CAAGTCCCTGTAAGAGGCACTGTGTTTTGGGGCTGCCAAGTGCTATGGCA 1050
                                                                 
sj04320     46 .................................................. 46

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
                                        S  V  L  T               
mth00885  1051 CCTGGCATATATACTCCCACACAGCTCTGTACTCAGGGGATGACAGCCCT 1100
                                       ||| |  ||||               
sj04320     46 ........................CTCGGGCCTCA............... 56
                                        S  G  L  I               

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
mth00885  1101 GGTTCCCAGCATTCTTTACCAGAGGGGTAATTGCGTCATGTTGAAGCTGG 1150
                                                                 
sj04320     57 .................................................. 57

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
                                       V  N  N  A  T  R  H       
mth00885  1151 TCACTCTTTGCTGACTATGTAACTGTTAACAATGCCACACGCCATGACCT 1200
                                      ||| ||||| ||  | | |        
sj04320     57 ......................TTGTCAACAAGGCGCCCCACG....... 77
                                       V  N  K  A  P  H  D       

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
mth00885  1201 CTGCTTCCCTACCTGTGGAAGACACACTTGTTACCTGACCATTTACCTGC 1250
                                                                 
sj04320     78 .................................................. 78

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
mth00885  1251 TACAAGCCATGGAGTTGCCACATGCTGTGACCTCAGCTTCCCACCTGTGG 1300
                                                                 
sj04320     78 .................................................. 78

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
                               L  Q  F                           
mth00885  1301 AGGACACACTTGTCACCTCCAGTTGGGAAGTGGAGGCTTGAAGAACAAGA 1350
                             || |||||||                          
sj04320     78 ..............ACTTCCAGTT.......................... 87
                               F  Q  F                           

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mth00885  1351 AAAATTCAGGGTTACCCTGTTTACCTAGCAAGTCAGAGACCAGCTTATAG 1400
                                                                 
sj04320     88 .................................................. 88

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mth00885  1401 GACACTCTGTCCAAAAAAGCAAAAGGAAAAAAAGTGACCCAGGGGGGTGC 1450
                                                                 
sj04320     88 .................................................. 88

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
                        V  Q  L  M  G            E  A  G  L  Q  A
mth00885  1451 ACATGTTCTGTGCAGCTGATGGGCACCGAGTAAGGAGGCTGGCTTGCAGG 1500
                       |||||||  || ||            ||| ||||    ||  
sj04320     88 ........TGTGCAGAAGACGGA..........TGAGTCTGGGCCCCACT 119
                        V  Q  K  T  D            E  S  G  P  H  S

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
                 H  S  H                                         
mth00885  1501 CTCACAGCCATGTGCCTAGCTTCAAAGGTGCTGAGGAGTCAGCTATGAGC 1550
               | ||| |||                                         
sj04320    120 CCCACCGCC......................................... 128
                 H  R  L                                         

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mth00885  1551 TTGAGAGCTCTCCAGCAGAGATCCAGTCCAGCTAGGTAGAGGTGCATGTG 1600
                                                                 
sj04320    129 .................................................. 129

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mth00885  1601 TCCTGTCACCAGGCAACTGCCCACATTCCCTCAGCGACCATCCATGTCCT 1650
                                                                 
sj04320    129 .................................................. 129

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mth00885  1651 TCAGTCAGGGCTCAAATCCATTTGTCCTCAGAGGTGATGCCCACAGGAGC 1700
                                                                 
sj04320    129 .................................................. 129

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mth00885  1701 CTCAGGCATGGGGCTTGAGGAGGGTGGAGTTGGAGCTCTCCCCAACCCAG 1750
                                                                 
sj04320    129 .................................................. 129

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mth00885  1751 GGCTGCAGTGTGAGGAAACAATCTCTAAGAGCACCTGCTATGCCCGAGGG 1800
                                                                 
sj04320    129 .................................................. 129

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mth00885  1801 TGTGACATGCTTGCATGCATGAGCACACACTCCTCCCAGAGGAATCTTCT 1850
                                                                 
sj04320    129 .................................................. 129

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mth00885  1851 AGAGCCACCCCTGACTGCAGGAGGGCTGATTCCCAGAGGCTGCTGCAGCC 1900
                                                                 
sj04320    129 .................................................. 129

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mth00885  1901 ACTGTGGCCTGAGTCTTGGGGTGGGAGAGCCTACCACAGGCATGACCAAA 1950
                                                                 
sj04320    129 .................................................. 129

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
mth00885  1951 CAGCAGGGCTGGGTAGAGTGCAGGCTGTACAAATGTATCCCCAGCACCCG 2000
                                                                 
sj04320    129 .................................................. 129

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
mth00885  2001 TGTCAAGGCCAGACATGCTCAATGCACCTGTCACCCGGCAGGTGTCTGTG 2050
                                                                 
sj04320    129 .................................................. 129

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
mth00885  2051 TCAGGGAAGGGGAGCTAGGAAGACACCTGGGGCTCAATGGCCAGCCAGCT 2100
                                                                 
sj04320    129 .................................................. 129

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
mth00885  2101 AAGTCAGCAGGCGATCCTCACTGCCAACATTTGGGAGAATAATGCAGGTG 2150
                                                                 
sj04320    129 .................................................. 129

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
mth00885  2151 GATTCCTGTAGATTCAAGACAGAGAGAGCGAGGGAGAGGAGATGCCTGAT 2200
                                                                 
sj04320    129 .................................................. 129

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
mth00885  2201 GCCTTCTGTATGCACACAGTGATGGACACATGGACTCTGACTAGAGAGAG 2250
                                                                 
sj04320    129 .................................................. 129

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
mth00885  2251 GAAGCCATGGCCTGACACCCTCTCAGGTAGGGCCCCCAAACTCTTGAGCG 2300
                                                                 
sj04320    129 .................................................. 129

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
                        S  S  P  G  M  P  Y  G  S  R  E  N  S  L 
mth00885  2301 TTCTCTGACTCCTCTCCAGGAATGCCTTACGGCAGCCGTGAGAACTCCCT 2350
                       || ||  |  |||||||| || |||||||| |||||||||||
sj04320    129 .......TCTACTACCTGGGAATGCCATATGGCAGCCGAGAGAACTCCCT 171
                        Y  Y  L  G  M  P  Y  G  S  R  E  N  S  L 

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
                L  Y  S  E  I  P  K  K  V  R  K  E  A  L  L  L  L
mth00885  2351 CCTCTACTCCGAGATCCCCAAGAAAGTGCGGAAGGAGGCCCTGCTGCTGC 2400
               ||||||||| ||||| |||||||| || ||||| ||||| |||||||| |
sj04320    172 CCTCTACTCTGAGATTCCCAAGAAGGTCCGGAAAGAGGCTCTGCTGCTCC 221
                L  Y  S  E  I  P  K  K  V  R  K  E  A  L  L  L  L

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
                 S  W  K  Q  M  L  D  H  F  Q  A  T  P  H  H  G  
mth00885  2401 TGTCCTGGAAGCAGATGCTGGACCACTTCCAGGCCACACCCCACCATGGT 2450
               |||||||||||||||||||||| || ||||||||||| ||||||||||| 
sj04320    222 TGTCCTGGAAGCAGATGCTGGATCATTTCCAGGCCACGCCCCACCATGGG 271
                 S  W  K  Q  M  L  D  H  F  Q  A  T  P  H  H  G  

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
               V  Y  S  R  E  E  E  L  L  R  E  R  K  R  L  G  V 
mth00885  2451 GTCTACTCCCGAGAGGAGGAGCTACTGCGGGAGCGCAAGCGCCTGGGCGT 2500
               |||||||| || ||||||||||| ||| ||||||| || |||||||| ||
sj04320    272 GTCTACTCTCGGGAGGAGGAGCTGCTGAGGGAGCGGAAACGCCTGGGGGT 321
               V  Y  S  R  E  E  E  L  L  R  E  R  K  R  L  G  V 

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
                F  G  I  T  S  Y  D  F  H  S  E  S  G  L  F  L  F
mth00885  2501 CTTCGGAATCACCTCTTATGACTTCCACAGTGAGAGCGGCCTCTTCCTCT 2550
               |||||| |||||||| || ||||||||||| ||||| |||||||||||||
sj04320    322 CTTCGGCATCACCTCCTACGACTTCCACAGCGAGAGTGGCCTCTTCCTCT 371
                F  G  I  T  S  Y  D  F  H  S  E  S  G  L  F  L  F

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
                 Q  A  S  N  S  L  F  H  C  R  D  G  G  K  N  G  
mth00885  2551 TCCAGGCCAGCAATAGCCTGTTCCACTGCAGGGATGGTGGCAAGAATGGC 2600
               ||||||||||||| ||||| ||||||||| | || || |||||||| |||
sj04320    372 TCCAGGCCAGCAACAGCCTCTTCCACTGCCGCGACGGCGGCAAGAACGGC 421
                 Q  A  S  N  S  L  F  H  C  R  D  G  G  K  N  G  

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
               F  M  V  S  P  M  K  P  L  E  I  K  T  Q  C  S  G 
mth00885  2601 TTTATGGTGTCCCCGATGAAGCCACTGGAGATCAAGACTCAGTGTTCTGG 2650
               || ||||||||||| ||||| || ||||| |||||||| ||||| || ||
sj04320    422 TTCATGGTGTCCCCTATGAAACCGCTGGAAATCAAGACCCAGTGCTCAGG 471
               F  M  V  S  P  M  K  P  L  E  I  K  T  Q  C  S  G 

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
                P  R  M  D  P  K  I  C  P  A  D  P  A  F  F  S  F
mth00885  2651 GCCACGCATGGACCCCAAAATCTGCCCCGCAGACCCTGCCTTCTTTTCCT 2700
               ||| || |||||||||||||||||||| || |||||||||||||| ||||
sj04320    472 GCCCCGGATGGACCCCAAAATCTGCCCTGCCGACCCTGCCTTCTTCTCCT 521
                P  R  M  D  P  K  I  C  P  A  D  P  A  F  F  S  F

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
                 I  N  N  S  D  L  W  V  A  N  I  E  T  G  E  E  
mth00885  2701 TCATCAACAACAGTGATCTGTGGGTGGCAAACATCGAGACTGGGGAGGAA 2750
               ||||||| ||||| || ||||||||||| ||||||||||| || ||||| 
sj04320    522 TCATCAATAACAGCGACCTGTGGGTGGCCAACATCGAGACAGGCGAGGAG 571
                 I  N  N  S  D  L  W  V  A  N  I  E  T  G  E  E  

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
               R  R  L  T  F  C  H  Q  G  S  A  G  V  L  D  N  P 
mth00885  2751 CGGCGGCTCACCTTCTGTCACCAGGGTTCAGCTGGTGTCCTGGACAATCC 2800
               |||||||| |||||||| ||||| |||| | |   |||||||||  | ||
sj04320    572 CGGCGGCTGACCTTCTGCCACCAAGGTTTATCCAATGTCCTGGATGACCC 621
               R  R  L  T  F  C  H  Q  G  L  S  N  V  L  D  D  P 

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
                K  S  A  G  V  A  T  F  V  I  Q  E  E  F  D  R  F
mth00885  2801 CAAATCAGCAGGCGTGGCCACCTTTGTCATCCAGGAGGAGTTCGACCGCT 2850
               ||| || || || ||||||||||| ||||| ||||| |||||||||||||
sj04320    622 CAAGTCTGCGGGTGTGGCCACCTTCGTCATACAGGAAGAGTTCGACCGCT 671
                K  S  A  G  V  A  T  F  V  I  Q  E  E  F  D  R  F

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
                 T  G  C  W  W  C  P  T  A  S  W  E  G  S  E  G  
mth00885  2851 TCACTGGGTGCTGGTGGTGCCCCACGGCCTCTTGGGAAGGCTCCGAAGGT 2900
               ||||||||| ||||||||||||||| ||||| |||||||| || || || 
sj04320    672 TCACTGGGTACTGGTGGTGCCCCACAGCCTCCTGGGAAGGTTCAGAGGGC 721
                 T  G  Y  W  W  C  P  T  A  S  W  E  G  S  E  G  

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
               L  K  T  L  R  I  L  Y  E  E  V  D  E  S  E  V  E 
mth00885  2901 CTCAAGACGCTGCGCATCCTATATGAGGAAGTGGACGAGTCTGAAGTGGA 2950
               |||||||||||||| ||||| ||||||||||| || ||||| || |||||
sj04320    722 CTCAAGACGCTGCGAATCCTGTATGAGGAAGTCGATGAGTCCGAGGTGGA 771
               L  K  T  L  R  I  L  Y  E  E  V  D  E  S  E  V  E 

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
                V  I  H  V  P  S  P  A  L  E  E  R  K  T  D  S  Y
mth00885  2951 GGTCATTCATGTGCCCTCCCCCGCCCTGGAGGAGAGGAAGACGGACTCCT 3000
               ||||||||| || ||||| || || || || || |||||||||||||| |
sj04320    772 GGTCATTCACGTCCCCTCTCCTGCGCTAGAAGAAAGGAAGACGGACTCGT 821
                V  I  H  V  P  S  P  A  L  E  E  R  K  T  D  S  Y

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
                 R  Y  P  R  T  G  S  K  N  P  K  I  A  L  K  L  
mth00885  3001 ACCGCTACCCCAGGACAGGCAGCAAGAACCCCAAGATTGCCCTGAAGCTG 3050
               | || ||||||||||||||||||||||| |||||||||||| |||| |||
sj04320    822 ATCGGTACCCCAGGACAGGCAGCAAGAATCCCAAGATTGCCTTGAAACTG 871
                 R  Y  P  R  T  G  S  K  N  P  K  I  A  L  K  L  

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
               A  E  L  Q  T  D  H  Q  G  K  I  V  S  S  C  E  K 
mth00885  3051 GCTGAGCTCCAGACGGACCATCAGGGCAAAATCGTGTCAAGCTGCGAGAA 3100
               |||||| ||||||| |||   |||||||| ||||| || | |   |||||
sj04320    872 GCTGAGTTCCAGACTGACAGCCAGGGCAAGATCGTCTCGACCCAGGAGAA 921
               A  E  F  Q  T  D  S  Q  G  K  I  V  S  T  Q  E  K 

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
                E  L  V  Q  P  F  S  S  L  F  P  K  V  E  Y  I  A
mth00885  3101 GGAACTGGTACAGCCATTCAGCTCCCTTTTCCCCAAAGTGGAGTACATCG 3150
               ||| ||||| ||||| |||||||| || ||||| || |||||||||||||
sj04320    922 GGAGCTGGTGCAGCCCTTCAGCTCGCTGTTCCCGAAGGTGGAGTACATCG 971
                E  L  V  Q  P  F  S  S  L  F  P  K  V  E  Y  I  A

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
                 R  A  G  W  T  R  D  G  K  Y  A  W  A  M  F  L  
mth00885  3151 CCCGGGCTGGCTGGACACGGGACGGCAAATATGCCTGGGCCATGTTCCTG 3200
               || |||| || ||||| ||||| |||||||| ||||||||||||||||||
sj04320    972 CCAGGGCCGGGTGGACCCGGGATGGCAAATACGCCTGGGCCATGTTCCTG 1021
                 R  A  G  W  T  R  D  G  K  Y  A  W  A  M  F  L  

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
               D  R  P  Q  Q  R  L  Q  L  V  L  L  P  P  A  L  F 
mth00885  3201 GACCGTCCCCAGCAACGGCTTCAGCTTGTCCTCCTGCCCCCTGCTCTCTT 3250
               ||||| ||||||||  |||| ||||| |||||||| ||||| || || ||
sj04320   1022 GACCGGCCCCAGCAGTGGCTCCAGCTCGTCCTCCTCCCCCCGGCCCTGTT 1071
               D  R  P  Q  Q  W  L  Q  L  V  L  L  P  P  A  L  F 

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
                I  P  A  V  E  S  E  A  Q  R  Q  A  A  A  R  A  V
mth00885  3251 CATCCCGGCCGTTGAGAGTGAGGCCCAGCGGCAGGCAGCTGCCAGAGCCG 3300
               |||||||  |   |||| |||||  |||||||  ||  |||||||||| |
sj04320   1072 CATCCCGAGCACAGAGAATGAGGAGCAGCGGCTAGCCTCTGCCAGAGCTG 1121
                I  P  S  T  E  N  E  E  Q  R  L  A  S  A  R  A  V

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
                 P  K  N  V  Q  P  F  V  I  Y  E  E  V  T  N  V  
mth00885  3301 TCCCCAAGAATGTGCAGCCCTTTGTCATCTATGAAGAAGTCACCAATGTC 3350
               |||||| |||||| ||||| | |||  | || || || |||||||| |||
sj04320   1122 TCCCCAGGAATGTCCAGCCGTATGTGGTGTACGAGGAGGTCACCAACGTC 1171
                 P  R  N  V  Q  P  Y  V  V  Y  E  E  V  T  N  V  

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
               W  I  N  V  H  D  I  F  H  P  F  P  Q  A  E  G  Q 
mth00885  3351 TGGATCAACGTCCACGACATCTTCCACCCGTTTCCTCAGGCTGAGGGCCA 3400
               |||||||| || || ||||||||| | || || || ||  | |||||  |
sj04320   1172 TGGATCAATGTTCATGACATCTTCTATCCCTTCCCCCAATCAGAGGGAGA 1221
               W  I  N  V  H  D  I  F  Y  P  F  P  Q  S  E  G  E 

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
                Q  D  F  C  F  L  R  A  N  E  C  K  T  G  F  C  H
mth00885  3401 GCAGGACTTTTGTTTCCTTCGTGCCAACGAATGCAAGACTGGCTTCTGCC 3450
               | | ||  | || || || || ||||| ||||||||||| ||||||||||
sj04320   1222 GGACGAGCTCTGCTTTCTCCGCGCCAATGAATGCAAGACCGGCTTCTGCC 1271
                D  E  L  C  F  L  R  A  N  E  C  K  T  G  F  C  H

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
                 L  Y  R  V  T  V  E  L  K  T  K  D  Y  D  W  T  
mth00885  3451 ACCTGTACAGGGTCACAGTGGAACTTAAAACCAAGGACTATGACTGGACG 3500
               |  ||||||  ||||| |  |   | ||| || ||| ||| || ||||  
sj04320   1272 ATTTGTACAAAGTCACCGCCGTTTTAAAATCCCAGGGCTACGATTGGAGT 1321
                 L  Y  K  V  T  A  V  L  K  S  Q  G  Y  D  W  S  

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
               E  P  L  S  P  T  E  D  E  F  K  C  P  I  K  E  E 
mth00885  3501 GAACCCCTCAGCCCTACAGAAGATGAGTTTAAGTGCCCCATCAAGGAGGA 3550
               || ||| |||||||    |||||||| |||||||||||||| ||||| ||
sj04320   1322 GAGCCCTTCAGCCCCGGGGAAGATGAATTTAAGTGCCCCATTAAGGAAGA 1371
               E  P  F  S  P  G  E  D  E  F  K  C  P  I  K  E  E 

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
                V  A  L  T  S  G  E  W  E  V  L  S  R  H  G  S  K
mth00885  3551 GGTCGCCCTGACCAGTGGCGAGTGGGAGGTCTTGTCGAGGCATGGCTCCA 3600
               | | || |||||||| || || |||||||| ||| ||||||| |||||||
sj04320   1372 GATTGCTCTGACCAGCGGTGAATGGGAGGTTTTGGCGAGGCACGGCTCCA 1421
                I  A  L  T  S  G  E  W  E  V  L  A  R  H  G  S  K

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
                 I  W  V  N  E  Q  T  K  L  V  Y  F  Q  G  T  K  
mth00885  3601 AGATCTGGGTCAACGAGCAGACGAAGCTGGTGTACTTTCAAGGTACAAAG 3650
               ||||||||||||| ||| |||| |||||||||||||| || || || |||
sj04320   1422 AGATCTGGGTCAATGAGGAGACCAAGCTGGTGTACTTCCAGGGCACCAAG 1471
                 I  W  V  N  E  E  T  K  L  V  Y  F  Q  G  T  K  

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
               D  T  P  L  E  H  H  L  Y  V  V  S  Y  E  S  A  G 
mth00885  3651 GACACACCGCTGGAACATCACCTCTATGTGGTCAGCTACGAGTCAGCAGG 3700
               ||||| |||||||| || |||||||| ||||||||||| ||| | || ||
sj04320   1472 GACACGCCGCTGGAGCACCACCTCTACGTGGTCAGCTATGAGGCGGCCGG 1521
               D  T  P  L  E  H  H  L  Y  V  V  S  Y  E  A  A  G 

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
                E  I  V  R  L  T  T  L  G  F  F  H  S  C  S  M  S
mth00885  3701 CGAGATCGTGCGGCTCACCACGCTCGGCTTCTTCCACAGCTGCTCCATGA 3750
               ||||||||| || |||||||||| |||||||| ||| |||||||||||||
sj04320   1522 CGAGATCGTACGCCTCACCACGCCCGGCTTCTCCCATAGCTGCTCCATGA 1571
                E  I  V  R  L  T  T  P  G  F  S  H  S  C  S  M  S

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
                 Q  S  F  D  M  F  V  S  H  Y  S  S  V  S  T  P  
mth00885  3751 GCCAGAGCTTCGACATGTTCGTGAGTCACTACAGCAGTGTGAGCACGCCA 3800
               |||||| ||||||||||||||| || ||||||||||| ||||||||||| 
sj04320   1572 GCCAGAACTTCGACATGTTCGTCAGCCACTACAGCAGCGTGAGCACGCCG 1621
                 Q  N  F  D  M  F  V  S  H  Y  S  S  V  S  T  P  

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
               P  C  V  H  V  Y  K  L  S  G  P  D  D  D  P  L  H 
mth00885  3801 CCCTGTGTACATGTGTACAAGCTGAGCGGCCCCGATGATGACCCACTGCA 3850
               ||||| || || || |||||||||||||||||||| || ||||| |||||
sj04320   1622 CCCTGGGTGCACGTCTACAAGCTGAGCGGCCCCGACGACGACCCCCTGCA 1671
               P  W  V  H  V  Y  K  L  S  G  P  D  D  D  P  L  H 

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
                K  Q  P  R  F  W  A  S  M  M  E  A  A  N  C  P  P
mth00885  3851 CAAGCAACCACGCTTCTGGGCCAGCATGATGGAGGCAGCCAATTGCCCCC 3900
               |||||| || ||||||||||| |||||||||||||||||||  |||||||
sj04320   1672 CAAGCAGCCCCGCTTCTGGGCTAGCATGATGGAGGCAGCCAGCTGCCCCC 1721
                K  Q  P  R  F  W  A  S  M  M  E  A  A  S  C  P  P

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
                 D  Y  V  P  P  E  I  F  H  F  H  T  R  A  D  V  
mth00885  3901 CAGACTATGTGCCCCCTGAGATCTTCCACTTCCACACCCGTGCAGACGTG 3950
               | || ||||| || || ||||||||||| |||||||| ||  | || |||
sj04320   1722 CGGATTATGTTCCTCCAGAGATCTTCCATTTCCACACGCGCTCGGATGTG 1771
                 D  Y  V  P  P  E  I  F  H  F  H  T  R  S  D  V  

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
               Q  L  Y  G  M  I  Y  K  P  H  T  L  Q  P  G  R  K 
mth00885  3951 CAGCTCTACGGCATGATCTACAAGCCACACACCCTGCAACCTGGGAGGAA 4000
               | |||||||||||||||||||||||| ||| || |||| || |||| |||
sj04320   1772 CGGCTCTACGGCATGATCTACAAGCCCCACGCCTTGCAGCCAGGGAAGAA 1821
               R  L  Y  G  M  I  Y  K  P  H  A  L  Q  P  G  K  K 

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
                H  P  T  V  L  F  V  Y  G  -                     
mth00885  4001 GCACCCCACTGTGCTCTTTGTCTATGGGGG.................... 4030
               ||||||||| || |||||||| ||||| ||                    
sj04320   1822 GCACCCCACCGTCCTCTTTGTATATGGAGGCCCCCAGGTGAGTGCACACC 1871
                H  P  T  V  L  F  V  Y  G  G  P  Q  V  S  A  H  L

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
mth00885  4031 .................................................. 4031
                                                                 
sj04320   1872 TGCTCCCCAGGCCCCCACCCCACCATCCACCCGAGGACTCCCCATCCCCA 1921
                 L  P  R  P  P  P  H  H  P  P  E  D  S  P  S  P  

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
mth00885  4031 .................................................. 4031
                                                                 
sj04320   1922 CTCAAGTGCCAGCTGTAGAACAGTCAACCAGAGGAGGCTCCCCGGCTACC 1971
               L  K  C  Q  L  *                                  

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
mth00885  4031 .................................................. 4031
                                                                 
sj04320   1972 TGCCTGGTGCCCCAGCCCACCCCGCCTGCCCTGACTACACAGGGTCCTCG 2021

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2022 GGCCCCCTCACCCTCCTTTCTCTGTGCCCGTTTGCACGCTCCCCGCCCTT 2071

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2072 CCTGGATGGCCTCCCCTTCCCCCTCCGCCTGCTGACTCTCCCTTGTTCCT 2121

          4301 ----+----*----+----*----+----*----+----*----+----* 4350
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2122 CTAGGAAGTCCCCTAGTCTCCAGGTTGGTATGGAGGTGGCCATGGGCCCT 2171

          4351 ----+----*----+----*----+----*----+----*----+----* 4400
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2172 GGGCCCAATTCCTGGAGCAGGGGTCAAAAGCAGGCAGCAGATTGGCAGTT 2221

          4401 ----+----*----+----*----+----*----+----*----+----* 4450
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2222 GGACCATCTTAGGCGCACATCTTACCCAGAGCAGCTCTGTCCCCACAGAG 2271

          4451 ----+----*----+----*----+----*----+----*----+----* 4500
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2272 GATACGGGGCGATGTCTGGGTACTTTGTGGTTCATCACCACTGCGAGTTC 2321

          4501 ----+----*----+----*----+----*----+----*----+----* 4550
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2322 TCCTGGCCTGGAGTGGCTTCTCAGCACCCCGCAGTGCCCAGATGGCCCCA 2371

          4551 ----+----*----+----*----+----*----+----*----+----* 4600
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2372 CCCGAGAAGGAGCCACCCCAATGTCCATCATGCCAGAGTAGTTGTTCCAG 2421

          4601 ----+----*----+----*----+----*----+----*----+----* 4650
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2422 GCAGGACTGGGGCAGTGGCCCAGCTGAGAAAGAGCCTGACAGTGGCCCTT 2471

          4651 ----+----*----+----*----+----*----+----*----+----* 4700
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2472 CCCCCTCCCTAGCAGGGTCCCGAGTATGGGCCCCTCCCGCCTTGCCACTC 2521

          4701 ----+----*----+----*----+----*----+----*----+----* 4750
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2522 CCAGGTGTCCATCCAGAGCCTCCGGGGCACAGGTGCTTTCATTAGGCTCT 2571

          4751 ----+----*----+----*----+----*----+----*----+----* 4800
mth00885  4031 .................................................. 4031
                                                                 
sj04320   2572 GAGGCCCCAGCCCGGCCCGGTCCCCAGCCCACCGGCATCTCCCCTGCCAG 2621

          4801 ----+----*----+----*----+----*----+----*----+----* 4850
mth00885  4031 ..............................................CCCA 4034
                                                             ||||
sj04320   2622 GCCCGTCCTGCCCGGCATCTCGTGCTGGACTGCTGGCCCTCACCTCCCCA 2671

          4851 ----+----*----+----*----+----*----+----*----+----* 4900
mth00885  4035 CAGGTGCAGTTGGTGAACAACTCCTTTAAGGGCATCAAATACCTGCGGCT 4084
               ||||||||| ||||||| |||||||| || |||||||| ||| |||||||
sj04320   2672 CAGGTGCAGCTGGTGAATAACTCCTTCAAAGGCATCAAGTACTTGCGGCT 2721

          4901 ----+----*----+----*----+----*----+----*----+----* 4950
mth00885  4085 AAATACACTGGCATCCTTGGGCTATGCTGTGGTGGTGATCGATGGTCGGG 4134
                || |||||||| ||| ||||||| || ||||| ||||| || ||  |||
sj04320   2722 CAACACACTGGCCTCCCTGGGCTACGCCGTGGTTGTGATTGACGGCAGGG 2771

          4951 ----+----*----+----*----+----*----+----*----+----* 5000
mth00885  4135 GCTCCTGTCAGCGGGGCCTGCACTTCGAGGGGGCCCTGAAAAATCAAATG 4184
               ||||||||||||| || || |  ||||| |||||||||||||| ||||||
sj04320   2772 GCTCCTGTCAGCGAGGGCTTCGGTTCGAAGGGGCCCTGAAAAACCAAATG 2821

          5001 ----+----*----+----*----+----*----+----*----+----* 5050
mth00885  4185 GGCCAGGTGGAGATTGAGGACCAGGTGGAAGGCTTGCAGTACGTGGCTGA 4234
               |||||||||||||| |||||||||||||| ||| |||||| |||||| ||
sj04320   2822 GGCCAGGTGGAGATCGAGGACCAGGTGGAGGGCCTGCAGTTCGTGGCCGA 2871

          5051 ----+----*----+----*----+----*----+----*----+----* 5100
mth00885  4235 GAAGTATGGCTTCATTGACTTGAGCCGAGTCGCCATCCATGGCTGGTCCT 4284
               ||||||||||||||| ||| |||||||||| |||||||||||||||||||
sj04320   2872 GAAGTATGGCTTCATCGACCTGAGCCGAGTTGCCATCCATGGCTGGTCCT 2921

          5101 ----+----*----+----*----+----*----+----*----+----* 5150
mth00885  4285 ACGGCGGCTTCCTCTCACTCATGGGGCTCATCCACAAGCCACAAGTTGTT 4334
               |||| ||||||||||| ||||||||||| ||||||||||| | || ||||
sj04320   2922 ACGGGGGCTTCCTCTCGCTCATGGGGCTAATCCACAAGCC.CCAGGTGTT 2970

          5151 ----+----*----+----*----+----*----+----*----+----* 5200
mth00885  4335 CAAGCCGCCCCACGAGGCCGAGTCCCCCTCCTCATTGCCTGCCACCACCG 4384
               ||||| |||||||| ||||||| |||||||||||||||| |||||| |||
sj04320   2971 CAAGCAGCCCCACGGGGCCGAGCCCCCCTCCTCATTGCCCGCCACCGCCG 3020

          5201 ----+----*----+----*----+----*----+----*----+----* 5250
mth00885  4385 ACCCCAGGATGGCAT................CCGCCAGCAGCTCTATGTG 4418
               ||| |||||||||||                |||||||||||||| ||||
sj04320   3021 ACCGCAGGATGGCATCCGGCTGCACAAAACCCCGCCAGCAGCTCTCTGTG 3070

          5251 ----+----*----+----*----+----*----+----*----+----* 5300
mth00885  4419 GGAGGCCAAGCCCGGGACCCCCGCCTCGGAGGGGCAGAGGTAGCCATTGC 4468
               ||||||  ||||||||||||| |||||||| |||||||||| ||||| ||
sj04320   3071 GGAGGCTGAGCCCGGGACCCCGGCCTCGGATGGGCAGAGGTGGCCATCGC 3120

          5301 ----+----*----+----*----+----*----+----*----+----* 5350
mth00885  4469 GGGCGCTCCTGTCACTGTGTGGATGGCCTATGACACAGGGTACACGGAAC 4518
               ||| || || ||||| || ||||||||||| |||||||||||||| || |
sj04320   3121 GGGTGCCCCGGTCACCGTCTGGATGGCCTACGACACAGGGTACACTGAGC 3170

          5351 ----+----*----+----*----+----*----+----*----+----* 5400
mth00885  4519 GATACATGGATGTCCCCGAAAATAACCAGCAAGGCTATGAGGCAGGGTCT 4568
               | |||||||| ||||| || || |||||||| ||||||||||| || || 
sj04320   3171 GCTACATGGACGTCCCTGAGAACAACCAGCACGGCTATGAGGCGGGTTCC 3220

          5401 ----+----*----+----*----+----*----+----*----+----* 5450
mth00885  4569 GTAGCCCTGCATGTGGAGAAGCTGCCCAATGAGCCTAACCGCCTGCTTAT 4618
               || |||||||| ||||||||||||||||||||||| |||||| |||||||
sj04320   3221 GTGGCCCTGCACGTGGAGAAGCTGCCCAATGAGCCCAACCGCTTGCTTAT 3270

          5451 ----+----*----+----*----+----*----+----*----+----* 5500
mth00885  4619 CCTCCACGGCTTCCTGGACGAGAACGTTCACTTCTTCCACACAAATTTCC 4668
               ||||||||||||||||||||| ||||| ||||| ||||||||||| ||||
sj04320   3271 CCTCCACGGCTTCCTGGACGAAAACGTGCACTTTTTCCACACAAACTTCC 3320

          5501 ----+----*----+----*----+----*----+----*----+----* 5550
mth00885  4669 TGGTGTCCCAGCTGATCCGAGCAGGAAAGCCATACCAGCTTCAGATCTAC 4718
               | || ||||| |||||||||||||| || || |||||||| |||||||||
sj04320   3321 TCGTCTCCCAACTGATCCGAGCAGGGAAACCTTACCAGCTCCAGATCTAC 3370

          5551 ----+----*----+----*----+----*----+----*----+----* 5600
mth00885  4719 CCAAACGAGAGACATAGCATCCGCTGCCGCGAGTCCGGAGAGCATTACGA 4768
               || ||||||||||| || || ||||||| |||||| || ||||| || ||
sj04320   3371 CCCAACGAGAGACACAGTATTCGCTGCCCCGAGTCGGGCGAGCACTATGA 3420

          5601 ----+----*----+----*----+----*----+----*----+----* 5650
mth00885  4769 GGTGACGCTGCTGCACTTTCTGCAGGAACACCTGTGACCTCAGTCCCGAC 4818
                || ||| ||||||||||||| |||||| ||||     || || |    |
sj04320   3421 AGTCACGTTGCTGCACTTTCTACAGGAATACCT.....CTGAGCCTGCCC 3465

          5651 ----+----*----+----*----+----*----+----*----+----* 5700
mth00885  4819 TCCTGACGCCACCGCTGCTCTTCTTGCGTTTTTGTA.............. 4854
                || |  ||| || |  | |  |    ||   || |              
sj04320   3466 ACCGGGAGCCGCCACATCACAGCACAAGTGGCTGCAGCCTCCGCGGGGAA 3515

          5701 ----+----*----+----*----+----*----+----*----+----* 5750
mth00885  4855 .................................................. 4855
                                                                 
sj04320   3516 CCAGGCGGGAGGGACTGAGTGGGCCGCGGGCCCCAGTGAGGCACTTTGTC 3565

          5751 ----+----*----+----*----+----*----+----*----+----* 5800
mth00885  4855 .................................................. 4855
                                                                 
sj04320   3566 CCGCCCAGCGCTGGCCAGCCCCGAGGAGCCGCTGCCTTCACCGCCCCGAC 3615

          5801 ----+----*----+----*----+----*----+----*----+----* 5850
mth00885  4855 ..ATCTTTTCATTTTTGAAGCTTCCAATTTGCTTGCTGCTGCTGCTGCCT 4902
                  | || || ||||| || |   |       ||    | |||||| | |
sj04320   3616 GCCTTTTATCCTTTTTTAAACGCTCTTGGGTTTTATGTCCGCTGCTTCTT 3665

          5851 ----+----*----+----*----+----*----+----*----+----* 5900
mth00885  4903 GGGGGCCAGGACAGAG..........GTAGTGGCGGCCCCCATGCCGCCC 4942
               ||  |||  |||||||           | | | | |||||    |  |||
sj04320   3666 GGTTGCCGAGACAGAGAGATGGTGGTCTCGGGCCAGCCCCTCCTCTCCCC 3715

          5901 ----+----*----+----*----+----*----+----*----+----* 5950
mth00885  4943 TCCTTGAGCTGGTGAGGAGAAGTCGCCATTGAGCACACAACCTCCACCAG 4992
                ||||  |  |  ||||||    | |  |   |  |||        ||||
sj04320   3716 GCCTTCTG.GGAGGAGGAGGTCACACGCTGATGGGCACTGGAGAGGCCAG 3764

          5951 ----+----*----+----*----+----*----+----*----+----* 6000
mth00885  4993 A................................................. 4993
               |                                                 
sj04320   3765 AAGAGACTCAGAGGAGCGGGCTGCCTTCCGCCTGGGGCTCCCTGTGACCT 3814

          6001 ----+----*----+----*----+----*----+----*----+----* 6050
mth00885  4994 .........CTGCCATGGCCCCGAACCTGCAATTCCATCCTAGCGCAGAA 5034
                        ||| |  ||||    |||  |     || || |||    ||
sj04320   3815 CTCAGTCCCCTGGCCCGGCCAGCCACCGTCCCCAGCACCCAAGCATGCAA 3864

          6051 ----+----*----+----*----+----*----+----*----+----* 6100
mth00885  5035 GCATGTGCCTGCCACCTGCTGCCCCTGCAGAGTCATGTGTGT......TT 5078
                    || |  || |   | ||| |  ||   | |||| |||      ||
sj04320   3865 TTGCCTGTCCCCCCCGGCCAGCCTCCCCAACTTGATGTTTGTGTTTTGTT 3914

          6101 ----+----*----+----*----+----*----+----*----+----* 6150
mth00885  5079 GTGGTGGGCATTTTAAATAATTATTTAAAAGACAGGAAGTAAGCGGTACC 5128
                 || ||  |||||  ||||||||||||||||||||  |   |||||  |
sj04320   3915 TGGGGGGATATTTTTCATAATTATTTAAAAGACAGGCCGGGCGCGGTGGC 3964

          6151 ----+----*----+----*----+----*----+----*----+----* 6200
mth00885  5129 GAGCAATGAAACTGAAGGTACAGCACTGGGCGTCTGGGGACCCCACGCTC 5178
                  |       ||| |    |||||||  | |     |   |   ||   
sj04320   3965 TCAC.....GTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGAT 4009

          6201 ----+----*----+----*----+----*----+----*----+----* 6250
mth00885  5179 TCCCAACGCCCAGACTATGTGGAGCTGCCAAGCCCCTGTCTGGGCACCTC 5228
                 ||   |    |    |   || | |||  |||    |  ||  ||| |
sj04320   4010 CACCTGAGGTTGGGAGTTCAAGACCAGCCTGGCCAACATGGGGAAACCCC 4059

          6251 ----+----*----+----*----+----*----+----*----+----* 6300
mth00885  5229 TGCCCT.....................GCCTGTCTGCTGCCCGGATCCTC 5257
                 | ||                      |  || || || |  |  ||| 
sj04320   4060 GTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCGCGTGCCTA 4109

          6301 ----+----*----+----*----+----*----+----*----+----* 6350
mth00885  5258 CTCACTTAGCACCTAGGG.GTGTCAGGGTCGGGAGTAGGACCTGTCCTGA 5306
                   |  |||  || ||| |  | |||   | || | |       || | 
sj04320   4110 TAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGG 4159

          6351 ----+----*----+----*----+----*----+----*----+----* 6400
mth00885  5307 CCTCAGGGTTATATATAGCCCTTCCCCACTCCCTCCTACGAGAGTTCTGG 5356
                    | | |     |   ||     | | || |   ||   ||    ||
sj04320   4160 AGGTGGAGGTTGCGGTGAGCCAAGATCGCACCATTGCACTCCAGCCTGGG 4209

          6401 ----+----*----+----*----+----*----+----*----+--- 6448
mth00885  5357 CATAAAGAAGT..................................... 5367
               ||  ||||                                        
sj04320   4210 CAACAAGAGCGAAACTCTGTCTCAAAATAAATAAAAAATAAAAGACAG 4257