Comparison of KIAA cDNA sequences between mouse and human (KIAA0024)

<< Original sequence data >>

mouse  mKIAA0024 (mth00575)     length:   4810 bp
human   KIAA0024  (ha00556)     length:   2504 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      939       844       95      10.12
  CDS2 :      522       474       48       9.20
  Total:     1461      1318      143       9.79

  3'UTR:      925       622      303      32.76

amino acid

  CDS1 :      313       303       10       3.19
  CDS2 :      174       166        8       4.60
  Total:      487       469       18       3.70
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse   614 -  1552    614 -  1558      1 -   313
         human    61 -   999      1 -  1521     21 -   333
  CDS2 : mouse  3362 -  3886   3299 -  3886      1 -   174
         human  1000 -  1524      1 -  1524    334 -   507
  3'UTR: mouse  3887 -  4810
         human  1525 -  2504
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             1 G  R  G  L  R  G  R  G  R  T  G  R  R  T  M  A  S  17
mth00575   614 GGCCGGGGCCTCCGGGGCCGCGGCAGGACGGGGAGAAGAACTATGGCGTC 663
               ||| |||||| |||   ||||||||||||||||||  |  | ||||||||
ha00556     61 GGCTGGGGCCGCCGCCACCGCGGCAGGACGGGGAGGCGGGCCATGGCGTC 110
            21 G  W  G  R  R  H  R  G  R  T  G  R  R  A  M  A  S  37

            51 ----+----*----+----*----+----*----+----*----+----* 100
            18  C  V  G  S  R  T  L  S  K  D  D  V  N  Y  R  M  H 34
mth00575   664 CTGCGTGGGGAGCAGGACTCTGAGCAAGGATGATGTGAACTACAGGATGC 713
               ||||||||||||| |||| || ||||||||||||||||||||||  ||||
ha00556    111 CTGCGTGGGGAGCCGGACCCTAAGCAAGGATGATGTGAACTACAAAATGC 160
            38  C  V  G  S  R  T  L  S  K  D  D  V  N  Y  K  M  H 54

           101 ----+----*----+----*----+----*----+----*----+----* 150
            35   F  R  M  I  N  E  Q  Q  V  E  D  I  T  I  D  F   50
mth00575   714 ATTTCCGCATGATCAACGAGCAGCAAGTGGAGGACATCACCATAGACTTC 763
               ||||||| ||||||||||||||||||||||||||||||||||| ||||||
ha00556    161 ATTTCCGGATGATCAACGAGCAGCAAGTGGAGGACATCACCATTGACTTC 210
            55   F  R  M  I  N  E  Q  Q  V  E  D  I  T  I  D  F   70

           151 ----+----*----+----*----+----*----+----*----+----* 200
            51 F  Y  R  P  H  T  I  T  L  L  S  F  T  I  I  S  L  67
mth00575   764 TTCTACCGGCCGCACACCATCACCCTGCTCAGCTTCACCATCATCAGCCT 813
               |||||||||||||| ||||||||||||||||||||||||||| |||||||
ha00556    211 TTCTACCGGCCGCATACCATCACCCTGCTCAGCTTCACCATCGTCAGCCT 260
            71 F  Y  R  P  H  T  I  T  L  L  S  F  T  I  V  S  L  87

           201 ----+----*----+----*----+----*----+----*----+----* 250
            68  M  Y  F  A  F  T  R  D  D  S  V  P  E  D  N  I  W 84
mth00575   814 CATGTACTTCGCCTTCACCAGGGATGACTCTGTTCCGGAAGACAACATCT 863
               ||||||||||||||| |||||||||||||||||||| |||||||||||||
ha00556    261 CATGTACTTCGCCTTTACCAGGGATGACTCTGTTCCAGAAGACAACATCT 310
            88  M  Y  F  A  F  T  R  D  D  S  V  P  E  D  N  I  W 104

           251 ----+----*----+----*----+----*----+----*----+----* 300
            85   R  G  I  L  S  V  I  F  F  F  L  I  I  S  V  L   100
mth00575   864 GGAGAGGCATCCTGTCTGTTATCTTCTTCTTTCTCATCATCAGCGTGTTA 913
               ||||||||||||| |||||||| ||||||||||| |||||||| ||||||
ha00556    311 GGAGAGGCATCCTCTCTGTTATTTTCTTCTTTCTTATCATCAGTGTGTTA 360
           105   R  G  I  L  S  V  I  F  F  F  L  I  I  S  V  L   120

           301 ----+----*----+----*----+----*----+----*----+----* 350
           101 A  F  P  N  G  P  F  T  R  P  H  P  A  L  W  R  M  117
mth00575   914 GCATTCCCCAATGGTCCATTTACTCGACCTCATCCAGCCTTATGGCGAAT 963
               || |||||||||||||| || |||||||||||||||||||||||||||||
ha00556    361 GCTTTCCCCAATGGTCCGTTCACTCGACCTCATCCAGCCTTATGGCGAAT 410
           121 A  F  P  N  G  P  F  T  R  P  H  P  A  L  W  R  M  137

           351 ----+----*----+----*----+----*----+----*----+----* 400
           118  V  F  G  L  S  V  L  Y  F  L  F  L  V  F  L  L  F 134
mth00575   964 GGTTTTTGGTCTCAGTGTGTTGTATTTCCTCTTCTTGGTATTCCTCCTTT 1013
               ||||||||| ||||||||| | || ||||| ||| |||||||||| || |
ha00556    411 GGTTTTTGGACTCAGTGTGCTCTACTTCCTGTTCCTGGTATTCCTACTCT 460
           138  V  F  G  L  S  V  L  Y  F  L  F  L  V  F  L  L  F 154

           401 ----+----*----+----*----+----*----+----*----+----* 450
           135   L  N  F  E  Q  V  K  S  L  M  Y  W  L  D  P  N   150
mth00575  1014 TCCTGAACTTCGAGCAGGTTAAATCCCTGATGTATTGGCTGGATCCCAAT 1063
               ||||||| ||||||||||||||||| || ||||||||||| ||||| |||
ha00556    461 TCCTGAATTTCGAGCAGGTTAAATCTCTAATGTATTGGCTAGATCCAAAT 510
           155   L  N  F  E  Q  V  K  S  L  M  Y  W  L  D  P  N   170

           451 ----+----*----+----*----+----*----+----*----+----* 500
           151 L  R  Y  A  T  R  E  A  D  I  M  E  Y  A  V  N  C  167
mth00575  1064 CTTCGATATGCTACACGAGAAGCGGACATCATGGAGTATGCTGTGAACTG 1113
               |||||||| || ||| | ||||| ||  ||||||||||||||||||||||
ha00556    511 CTTCGATACGCCACAAGGGAAGCAGATGTCATGGAGTATGCTGTGAACTG 560
           171 L  R  Y  A  T  R  E  A  D  V  M  E  Y  A  V  N  C  187

           501 ----+----*----+----*----+----*----+----*----+----* 550
           168  H  V  I  T  W  E  R  I  V  S  H  F  D  I  F  A  F 184
mth00575  1114 TCATGTGATAACCTGGGAGAGAATCGTTAGTCACTTTGATATATTTGCAT 1163
                |||||||| ||||||||||| ||  | || ||||||||||| |||||||
ha00556    561 CCATGTGATCACCTGGGAGAGGATTATCAGCCACTTTGATATTTTTGCAT 610
           188  H  V  I  T  W  E  R  I  I  S  H  F  D  I  F  A  F 204

           551 ----+----*----+----*----+----*----+----*----+----* 600
           185   G  H  F  W  G  W  A  M  K  A  L  L  I  R  S  Y   200
mth00575  1164 TTGGCCATTTCTGGGGCTGGGCCATGAAGGCCTTGTTGATCCGTAGTTAT 1213
               |||| |||||||||||||||||||||||||||||| ||||||||||||| 
ha00556    611 TTGGACATTTCTGGGGCTGGGCCATGAAGGCCTTGCTGATCCGTAGTTAC 660
           205   G  H  F  W  G  W  A  M  K  A  L  L  I  R  S  Y   220

           601 ----+----*----+----*----+----*----+----*----+----* 650
           201 G  L  C  W  T  I  S  I  T  W  E  L  T  E  L  F  F  217
mth00575  1214 GGGCTTTGCTGGACAATCAGTATCACCTGGGAGCTGACAGAGCTTTTCTT 1263
               || || ||||||||||||||||| |||||||||||||| ||||| |||||
ha00556    661 GGTCTCTGCTGGACAATCAGTATTACCTGGGAGCTGACTGAGCTCTTCTT 710
           221 G  L  C  W  T  I  S  I  T  W  E  L  T  E  L  F  F  237

           651 ----+----*----+----*----+----*----+----*----+----* 700
           218  M  H  L  L  P  N  F  A  E  C  W  W  D  Q  V  I  L 234
mth00575  1264 CATGCATCTCCTGCCCAATTTTGCTGAGTGCTGGTGGGACCAAGTCATTC 1313
               |||||||||||| ||||||||||| |||||||||||||| ||||||||||
ha00556    711 CATGCATCTCCTCCCCAATTTTGCCGAGTGCTGGTGGGATCAAGTCATTC 760
           238  M  H  L  L  P  N  F  A  E  C  W  W  D  Q  V  I  L 254

           701 ----+----*----+----*----+----*----+----*----+----* 750
           235   D  I  L  L  C  N  G  G  G  I  W  L  G  M  V  V   250
mth00575  1314 TGGACATCCTGTTGTGCAATGGTGGTGGAATCTGGCTGGGCATGGTCGTT 1363
               |||||||||||||||||||||| ||||| || ||||||||||||||||||
ha00556    761 TGGACATCCTGTTGTGCAATGGCGGTGGCATTTGGCTGGGCATGGTCGTT 810
           255   D  I  L  L  C  N  G  G  G  I  W  L  G  M  V  V   270

           751 ----+----*----+----*----+----*----+----*----+----* 800
           251 C  R  F  L  E  M  R  T  Y  H  W  A  S  F  K  D  I  267
mth00575  1364 TGCCGGTTTCTGGAGATGAGAACTTACCACTGGGCAAGCTTCAAGGACAT 1413
               ||||||||| | |||||||| |||||||||||||||||||||||||||||
ha00556    811 TGCCGGTTTTTAGAGATGAGGACTTACCACTGGGCAAGCTTCAAGGACAT 860
           271 C  R  F  L  E  M  R  T  Y  H  W  A  S  F  K  D  I  287

           801 ----+----*----+----*----+----*----+----*----+----* 850
           268  H  T  T  T  G  K  I  K  R  A  V  L  Q  F  T  P  A 284
mth00575  1414 CCACACCACCACAGGGAAGATCAAGCGAGCTGTGCTGCAGTTCACCCCTG 1463
                || |||||||| |||||||||||| ||||||| ||||||||||| ||||
ha00556    861 TCATACCACCACCGGGAAGATCAAGAGAGCTGTTCTGCAGTTCACTCCTG 910
           288  H  T  T  T  G  K  I  K  R  A  V  L  Q  F  T  P  A 304

           851 ----+----*----+----*----+----*----+----*----+----* 900
           285   S  W  T  Y  V  R  W  F  D  P  K  S  S  F  Q  R   300
mth00575  1464 CTAGCTGGACTTACGTCAGGTGGTTTGATCCCAAGTCTTCCTTTCAGAGA 1513
               |||||||||| || ||  | |||||||| ||||| ||||| |||||||||
ha00556    911 CTAGCTGGACCTATGTTCGATGGTTTGACCCCAAATCTTCTTTTCAGAGA 960
           305   S  W  T  Y  V  R  W  F  D  P  K  S  S  F  Q  R   320

           901 ----+----*----+----*----+----*----+---- 939
           301 V  A  G  I  Y  L  F  M  I  I  W  Q  V   313
mth00575  1514 GTGGCTGGTATATACCTCTTCATGATCATATGGCAGGTA 1552
               || |||||  | ||||| ||||||||||| |||||| | 
ha00556    961 GTAGCTGGAGTGTACCTTTTCATGATCATCTGGCAGCTG 999
           321 V  A  G  V  Y  L  F  M  I  I  W  Q  L   333



*--[ CDS2 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             1 T  E  L  N  T  F  F  L  K  H  I  F  V  F  Q  A  S  17
mth00575  3362 ACTGAGTTGAATACCTTCTTCTTGAAGCACATCTTTGTGTTCCAAGCCAG 3411
               ||||||||||||||||||||||||||||| ||||||||||||||||||||
ha00556   1000 ACTGAGTTGAATACCTTCTTCTTGAAGCATATCTTTGTGTTCCAAGCCAG 1049
           334 T  E  L  N  T  F  F  L  K  H  I  F  V  F  Q  A  S  350

            51 ----+----*----+----*----+----*----+----*----+----* 100
            18  H  P  L  S  W  G  R  I  L  F  I  G  C  I  T  A  P 34
mth00575  3412 CCATCCCTTAAGCTGGGGTAGAATCCTCTTCATCGGCTGCATTACGGCTC 3461
                ||||| ||||| ||||||||||| ||||| || ||  |||| || ||||
ha00556   1050 TCATCCATTAAGTTGGGGTAGAATTCTCTTTATTGGTGGCATCACAGCTC 1099
           351  H  P  L  S  W  G  R  I  L  F  I  G  G  I  T  A  P 367

           101 ----+----*----+----*----+----*----+----*----+----* 150
            35   T  V  R  Q  Y  Y  A  Y  L  T  D  T  Q  C  K  R   50
mth00575  3462 CCACAGTGAGACAGTACTATGCCTACCTCACGGACACACAGTGCAAGCGT 3511
               ||||||||||||||||||| || |||||||| ||||||||||||||||| 
ha00556   1100 CCACAGTGAGACAGTACTACGCTTACCTCACCGACACACAGTGCAAGCGC 1149
           368   T  V  R  Q  Y  Y  A  Y  L  T  D  T  Q  C  K  R   383

           151 ----+----*----+----*----+----*----+----*----+----* 200
            51 V  G  T  Q  C  W  V  F  G  V  I  G  F  L  E  A  I  67
mth00575  3512 GTAGGGACACAGTGCTGGGTGTTTGGGGTCATTGGTTTCCTGGAAGCTAT 3561
               ||||| ||||| |||||||||||||||||||||||||||||||| || ||
ha00556   1150 GTAGGAACACAATGCTGGGTGTTTGGGGTCATTGGTTTCCTGGAGGCCAT 1199
           384 V  G  T  Q  C  W  V  F  G  V  I  G  F  L  E  A  I  400

           201 ----+----*----+----*----+----*----+----*----+----* 250
            68  V  C  I  K  F  G  Q  D  L  F  S  K  T  Q  I  L  Y 84
mth00575  3562 TGTTTGCATAAAATTTGGACAAGATCTCTTTTCTAAGACCCAGATACTCT 3611
               |||||||||||||||||||||||||||||| ||||||||||| |||||||
ha00556   1200 TGTTTGCATAAAATTTGGACAAGATCTCTTCTCTAAGACCCAAATACTCT 1249
           401  V  C  I  K  F  G  Q  D  L  F  S  K  T  Q  I  L  Y 417

           251 ----+----*----+----*----+----*----+----*----+----* 300
            85   V  M  L  W  L  L  C  V  A  F  T  T  F  L  C  L   100
mth00575  3612 ATGTGATGCTTTGGCTTCTTTGTGTGGCCTTCACCACGTTCCTGTGTCTG 3661
               ||||  |||||||||||||||| ||||| |||||||| ||||| ||||||
ha00556   1250 ATGTTGTGCTTTGGCTTCTTTGCGTGGCTTTCACCACTTTCCTCTGTCTG 1299
           418   V  V  L  W  L  L  C  V  A  F  T  T  F  L  C  L   433

           301 ----+----*----+----*----+----*----+----*----+----* 350
           101 Y  G  M  V  W  Y  A  E  H  Y  G  H  R  E  K  T  Y  117
mth00575  3662 TACGGCATGGTTTGGTATGCAGAGCACTATGGTCACCGGGAAAAGACCTA 3711
               ||||||||| ||||||||||||| |||||||||||||| |||||||||||
ha00556   1300 TACGGCATGATTTGGTATGCAGAACACTATGGTCACCGAGAAAAGACCTA 1349
           434 Y  G  M  I  W  Y  A  E  H  Y  G  H  R  E  K  T  Y  450

           351 ----+----*----+----*----+----*----+----*----+----* 400
           118  S  E  C  E  D  G  T  Y  S  P  E  I  S  W  H  H  G 134
mth00575  3712 TTCAGAGTGTGAAGATGGCACTTACAGTCCAGAGATCTCCTGGCATCATG 3761
                || ||||||||||||||||| ||||||||||||||||||||||||||  
ha00556   1350 CTCGGAGTGTGAAGATGGCACCTACAGTCCAGAGATCTCCTGGCATCACA 1399
           451  S  E  C  E  D  G  T  Y  S  P  E  I  S  W  H  H  R 467

           401 ----+----*----+----*----+----*----+----*----+----* 450
           135   K  G  S  K  G  S  E  D  S  P  P  K  H  S  S  N   150
mth00575  3762 GGAAAGGCTCCAAAGGTTCTGAAGACAGCCCACCGAAGCATTCAAGCAAC 3811
               |||||||  | ||||||||||||||||||||||| |||||| || |||||
ha00556   1400 GGAAAGGGACAAAAGGTTCTGAAGACAGCCCACCCAAGCATGCAGGCAAC 1449
           468   K  G  T  K  G  S  E  D  S  P  P  K  H  A  G  N   483

           451 ----+----*----+----*----+----*----+----*----+----* 500
           151 H  E  S  H  S  S  R  R  R  N  R  H  S  K  S  K  V  167
mth00575  3812 CACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCATTCTAAGTCCAAAGT 3861
                ||||||||||||||||||| |||||||| |||||||| ||||| |||||
ha00556   1450 AACGAAAGCCATTCTTCCAGGAGAAGGAATCGGCATTCCAAGTCAAAAGT 1499
           484 N  E  S  H  S  S  R  R  R  N  R  H  S  K  S  K  V  500

           501 ----+----*----+----*----+ 525
           168  T  N  G  V  G  K  K  *   175
mth00575  3862 CACTAATGGAGTTGGAAAGAAATGA 3886
               ||| ||||| |||||||||||||||
ha00556   1500 CACCAATGGCGTTGGAAAGAAATGA 1524
           501  T  N  G  V  G  K  K      507


*--[ 3'UTR ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
mth00575  3887 AGGAAGCTAGTTAATGTCAGATGTTCCAGAGTGCCTAGACCCGAGAGGAA 3936
               |  |  || ||||||   ||||||||||||||||||||| | |||||| |
ha00556   1525 AAAACCCTGGTTAATCAAAGATGTTCCAGAGTGCCTAGAACTGAGAGGGA 1574

            51 ----+----*----+----*----+----*----+----*----+----* 100
mth00575  3937 AA..CAGCATATTTGGACCTTCCTATGCAGAGATCATAATGTA....... 3977
               ||   | |  ||||||| || ||  ||  ||| ||     | |       
ha00556   1575 AATGGAACTCATTTGGAACTCCCCGTGAGGAGGTCGAGGCGCACAGGGCA 1624

           101 ----+----*----+----*----+----*----+----*----+----* 150
mth00575  3978 ..CGGAAAGAACCGAGGGAGCTTAGGGGATCGTGACTTGAGAGTGTAAGT 4025
                 | | ||||  ||||||  ||| |||| || | | ||||||  ||||||
ha00556   1625 AGCAGGAAGAGGCGAGGGCACTT.GGGGGTCATTATTTGAGATCGTAAGT 1673

           151 ----+----*----+----*----+----*----+----*----+----* 200
mth00575  4026 CTTGTCTCCCATAGACCTGGACACACACTAGGCTGACCAT.GGCTCGGGG 4074
               ||||| ||||| ||||||||   | |   |||| || ||| | || ||||
ha00556   1674 CTTGTTTCCCACAGACCTGG..CCGCGTCAGGCAGATCATCGCCTGGGGG 1721

           201 ----+----*----+----*----+----*----+----*----+----* 250
mth00575  4075 TCCTTTGCCAACTGGAAGAGTCTCTAAACTTCAGCGTATGGCCTGCATTC 4124
                |||||||||||  |  |  |||   |||||||||   || | |||  ||
ha00556   1722 GCCTTTGCCAACGTGGGGTCTCTTCTAACTTCAGCACTTGACATGCGGTC 1771

           251 ----+----*----+----*----+----*----+----*----+----* 300
mth00575  4125 TCTGGTAGCAATACAGTGTGCTGGAAGGACAGGATAGCTGTTTATTCCCA 4174
                | ||| |||   | ||||| || | ||| | | ||||| || |||| ||
ha00556   1772 ACCGGTGGCAGCGCGGTGTGTTGAAGGGAAACGGTAGCTATTCATTCACA 1821

           301 ----+----*----+----*----+----*----+----*----+----* 350
mth00575  4175 GCTGCCAGCAGTGGCTCTCTGCTGGTGTGTCTTGTGGATGTTGTATAAAT 4224
               | |||||  ||  ||||   ||  |  ||  | |||||||  |  |||| 
ha00556   1822 GTTGCCAAGAGCAGCTCCGCGCCTG.CTGGATCGTGGATGCAGCGTAAAC 1870

           351 ----+----*----+----*----+----*----+----*----+----* 400
mth00575  4225 GTCTTCATTCAGATGTTGACTTAACTAACTGGCTAATGAACTGGTCGC.. 4272
                ||||| |||||| |  |  |||||    ||| ||||| ||||||| |  
ha00556   1871 ATCTTCCTTCAGACGAGGCATTAACCCCATGGTTAATGGACTGGTCACCA 1920

           401 ----+----*----+----*----+----*----+----*----+----* 450
mth00575  4273 ...TTGGTTTTATTTTTATGAGTCTGCCTGTCCATTTGATTGATTGTTTA 4319
                  ||  |||||||||||||| ||| ||| |||| ||||||||   ||||
ha00556   1921 GTTTTTATTTTATTTTTATGAATCTACCTTTCCA.TTGATTGA...TTTA 1966

           451 ----+----*----+----*----+----*----+----*----+----* 500
mth00575  4320 AGTTCAG...................AGAGTCTGCTTTTACTTCATGTTT 4350
               |||||||                      |  | || ||  |   |||||
ha00556   1967 AGTTCAGGCCACTTTTCTGTCTTTTATTTGGTTACTGTTGTTATTTGTTT 2016

           501 ----+----*----+----*----+----*----+----*----+----* 550
mth00575  4351 TTGAGTTAAATAGC...TTCAAAGCTTCCAGAATCCACTGCTGAAATT.. 4395
               || |||||    ||   || | ||| |  |||| || |||||||||||  
ha00556   2017 TTAAGTTAGGATGCTTTTTAACAGCCTTTAGAAGCCGCTGCTGAAATTGA 2066

           551 ----+----*----+----*----+----*----+----*----+----* 600
mth00575  4396 .....GGGGGAGGG......TTCCTTCTAGAGAAACAAAGGGTGGAAGGA 4434
                    |||| ||||      |||||||||||| |  ||||   |||  ||
ha00556   2067 TACTGGGGGAAGGGTTCCCCTTCCTTCTAGAGCAGAAAAG...GGAGAGA 2113

           601 ----+----*----+----*----+----*----+----*----+----* 650
mth00575  4435 GCTTTGGTGTCCCAGCTAAGCATACTCAGTCCCCAG............CC 4472
                 | | || | || | |  | |  ||||||| || |            ||
ha00556   2114 AGTGTTGTATTCCTGTTTGGTAACCTCAGTCTCCTGTAAGACCTCCTACC 2163

           651 ----+----*----+----*----+----*----+----*----+----* 700
mth00575  4473 ACATGGC.AGATGACCCCAGCCGGAGTGAAGAGGCTGGCTGCTGGCACTG 4521
               ||||||| ||   || |||  |     | ||||| | |||||  |||  |
ha00556   2164 ACATGGCGAGTATACACCAATC....AGGAGAGGGTAGCTGCCTGCATAG 2209

           701 ----+----*----+----*----+----*----+----*----+----* 750
mth00575  4522 GAGCCTCGGCTTCAGATTAGAACTGTTTTGTTCCCTTCCAGACACTGTCC 4571
               ||||||| ||||| |||||   |  |     |    | ||  ||   |  
ha00556   2210 GAGCCTC.GCTTCCGATTATTCCCTTCCCAATATTATTCATCCAGACT.T 2257

           751 ----+----*----+----*----+----*----+----*----+----* 800
mth00575  4572 AGACTGAGTGCACAAGAACGACCTTGCGAGCGGATCTGGGA....CAGTG 4617
               || |  ||||||||| | | | | ||| || |   | | ||    ||  |
ha00556   2258 AGCCACAGTGCACAAAAGCAAACCTGCTAGAGAGGCAGTGAACACCACAG 2307

           801 ----+----*----+----*----+----*----+----*----+----* 850
mth00575  4618 GGGCT.CCCTGCCAGGGTCCTTTTCCATGTGCTTGGTTTTTCCTCTGTGA 4666
                  || ||| ||  ||  |||||| |||  | || ||| | | ||  || 
ha00556   2308 CTTCTCCCCAGCTTGGTGCCTTTTACATCGGGTTTGTTCTCCTTCCATGG 2357

           851 ----+----*----+----*----+----*----+----*----+----* 900
mth00575  4667 TGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGTGCTAGTGGGTATT 4716
               ||| ||||  ||  ||||  |  | | ||||||||||||| ||| ||   
ha00556   2358 TGTGTTGCTGACATTGTCACTGAGTCCCATGTGAGGTGCTGGTGAGT... 2404

           901 ----+----*----+----*----+----*----+----*----+----* 950
mth00575  4717 AATTAACTTTCATCTGTGCCATGTTCTA..........CTAAAACATTCT 4756
                |||| ||||||||||||||||| ||||          ||  |   ||| 
ha00556   2405 .ATTACCTTTCATCTGTGCCATGCTCTAGAACCTTGACCTTGATAGTTCA 2453

           951 ----+----*----+----*----+----*----+----*----+----* 1000
mth00575  4757 CCCTGTCTACCCTGGATCCTTGTTTTAAATATATCAGTTCACATTAAACA 4806
               ||  ||||    ||||||| ||||||||||| |   | |    || ||  
ha00556   2454 CCACGTCT..GATGGATCCCTGTTTTAAATAAAAACGATTCACTTTAAAG 2501

          1001 ---- 1004
mth00575  4807 GCTC 4810
                || 
ha00556   2502 CCT. 2504