FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA2023.ptfa, 1687 aa vs ./tmplib.26680 library 1767330 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.2155+/-0.00544; mu= 11.8434+/- 0.361 mean_var=131.2395+/-30.363, 0's: 0 Z-trim: 6 B-trim: 144 in 1/35 Lambda= 0.1120 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 41, opt: 29, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1259 ( 1196 res) mpm05149 (1196) 218 48 1.6e-05 mKIAA4075 ( 1945 res) mbg09037 (1945) 218 48 2.2e-05 mKIAA0308 ( 1890 res) mia33045 (1890) 192 44 0.0004 mKIAA1122 ( 1071 res) mbh00587 (1071) 187 43 0.00048 >>mKIAA1259 ( 1196 res) mpm05149 (1196 aa) initn: 278 init1: 128 opt: 218 Z-score: 191.5 bits: 48.0 E(): 1.6e-05 Smith-Waterman score: 218; 26.984% identity (28.492% ungapped) in 189 aa overlap (1506-1687:730-915) 1480 1490 1500 1510 1520 1530 mKIAA2 SIKCAICRQTTSHKEVSYVFTSEKANQEDDIPVKGS---HSTKVEAVVRTLMKIQLRDPG :: : : : :. :. .. .:.. : mKIAA1 DWLSRRSQFFPEPAGGLLSIRPQNGWSFIRIPGKESLITDSGKLYAL--DVLLTRLKSQG 700 710 720 730 740 750 1540 1550 1560 1570 1580 mKIAA2 AKALVFSTWQDVLDIISKALTDNNMEFTQI---SRIKTFQENLSAFKYDPHINILLLPLH ..:..: ..:.. . .. . . .. :.:. .. .. :. : ..:: . mKIAA1 HRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTR 760 770 780 790 800 810 1590 1600 1610 1620 1630 1640 mKIAA2 TGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEER-MQA .:. :... : :.. . ::. . ::. :.::.:::: . :.:.. :.::::: .: mKIAA1 AGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQR 820 830 840 850 860 870 1650 1660 1670 1680 mKIAA2 MLKTAERSHTSSSGKHSEASVLTVAGLADLFTKENEELE . .: .. :: . . ..: ...:. ..:::: mKIAA1 AKEKSEIQRMVISGGNFKPDTLKPKEVVSLLL-DDEELEKKLRLRQEEKRQQEESNRVKE 880 890 900 910 920 930 mKIAA1 RKRKREKYAEKKKKEDELDGKRRKEGVNLVIPFVPSADNSNLSADGDDSFISVDSAMPSP 940 950 960 970 980 990 >>mKIAA4075 ( 1945 res) mbg09037 (1945 aa) initn: 328 init1: 142 opt: 218 Z-score: 188.9 bits: 48.2 E(): 2.2e-05 Smith-Waterman score: 218; 27.011% identity (28.144% ungapped) in 174 aa overlap (1519-1686:1075-1247) 1490 1500 1510 1520 1530 1540 mKIAA2 KEVSYVFTSEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDII ... ..: .:.. : ..:.:: .::.. mKIAA4 LFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLK-NLKEGGHRVLIFSQMTKMLDLL 1050 1060 1070 1080 1090 1100 1550 1560 1570 1580 1590 1600 mKIAA2 SKALTDNNMEFTQISRIKT---FQENLSAFKYDPHINI-LLLPLHTGSNGLTIIEATHVL : ..... .:. : :: .. :. .. .:: ..:. :... : :. mKIAA4 EDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVI 1110 1120 1130 1140 1150 1160 1610 1620 1630 1640 1650 1660 mKIAA2 LVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERM-QAMLKTAERSH-TSSSG . . :: ...::..:.:::::.: ....::. .:..:::. :. : .: . : mKIAA4 IYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPG 1170 1180 1190 1200 1210 1220 1670 1680 mKIAA2 KHSEASVLTVAGLADLFTKENEELE :... .. : :.. .::: mKIAA4 LGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQ 1230 1240 1250 1260 1270 1280 >>mKIAA0308 ( 1890 res) mia33045 (1890 aa) initn: 197 init1: 109 opt: 192 Z-score: 166.3 bits: 44.0 E(): 0.0004 Smith-Waterman score: 192; 29.762% identity (32.258% ungapped) in 168 aa overlap (1527-1686:213-375) 1500 1510 1520 1530 1540 1550 mKIAA2 SEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNN ... : :.:.:: :::. : . mKIAA0 DTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR 190 200 210 220 230 240 1560 1570 1580 1590 1600 1610 mKIAA2 MEFTQIS-RIK--TFQENLSAF-KYDPHINILLLPLHTGSNGLTIIEATHVLLVEPILNP . . .:. :.. : .. : : : ..:: ..:. :... : .. . :: mKIAA0 YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 250 260 270 280 290 300 1620 1630 1640 1650 1660 mKIAA2 AHELQAIGRVHRIGQTKPTIVHRFLIKATIEERM--QAMLKTA--ERSHTSSSGKHSEAS ..::: .: :::::.: . :.:.. . . :..: .: :: . . : ::. :. mKIAA0 QNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSN-- 310 320 330 340 350 360 1670 1680 mKIAA2 VLTVAGLADLFTKENEELE :.:. .: :: :.: mKIAA0 ---VSGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDIDQILLRRTKTITIESEGR 370 380 390 400 410 >>mKIAA1122 ( 1071 res) mbh00587 (1071 aa) initn: 291 init1: 110 opt: 187 Z-score: 165.0 bits: 42.9 E(): 0.00048 Smith-Waterman score: 187; 33.071% identity (36.207% ungapped) in 127 aa overlap (1527-1646:910-1032) 1500 1510 1520 1530 1540 1550 mKIAA2 SEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNN .:.. : ....:: . .:::. : .. mKIAA1 KQYQHINSYQLDMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQ 880 890 900 910 920 930 1560 1570 1580 1590 1600 mKIAA2 MEF------TQIS-RIKTFQENLSAFKYDPHINILLLPLHTGSNGLTIIEATHVLLVEPI .. :::: ::. ..: :. : : ..:: ..:. :... :. :.: . mKIAA1 HRYLRLDGKTQISERIHLIDE----FNTDMDIFVFLLSTKAGGLGINLTSANVVILHDID 940 950 960 970 980 990 1610 1620 1630 1640 1650 1660 mKIAA2 LNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTSSSGKHSEASV :: .. :: : ::.:::: ..: ... ..:::: : mKIAA1 CNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEADEG 1000 1010 1020 1030 1040 1050 1670 1680 mKIAA2 LTVAGLADLFTKENEELE mKIAA1 SMPADIATLLKTSMGL 1060 1070 1687 residues in 1 query sequences 1767330 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:57:53 2006 done: Mon Mar 27 10:57:55 2006 Scan time: 1.350 Display time: 0.320 Function used was FASTA [version 3.4t11 Apr 17, 2002]