FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1769.ptfa, 1622 aa vs ./tmplib.26680 library 1767395 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.8352+/-0.00396; mu= 18.8732+/- 0.265 mean_var=87.8443+/-20.366, 0's: 0 Z-trim: 7 B-trim: 0 in 0/36 Lambda= 0.1368 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 41, opt: 29, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1955 ( 1073 res) mtj00267 (1073) 398 90 3.6e-18 mFLJ00327 ( 881 res) mid41093 ( 881) 396 89 4.2e-18 mKIAA1008 ( 451 res) mpm08036 ( 451) 297 69 2.1e-12 mKIAA0054 ( 1617 res) mbg06166 (1617) 199 51 3.2e-06 mKIAA0083 ( 1078 res) mpm08053 (1078) 181 47 2.9e-05 mKIAA1631 ( 1027 res) mej00871 (1027) 177 46 4.8e-05 mKIAA0560 ( 1500 res) mbg02505 (1500) 148 41 0.0033 >>mKIAA1955 ( 1073 res) mtj00267 (1073 aa) initn: 308 init1: 147 opt: 398 Z-score: 418.5 bits: 89.7 E(): 3.6e-18 Smith-Waterman score: 427; 24.621% identity (28.460% ungapped) in 593 aa overlap (318-880:352-894) 290 300 310 320 330 340 mKIAA1 NCGMAFTGDEVLVQILGPAGDDRCVPGSLQGRVMGVLKRRRHELAFVCRMDEW-DPRIMI :::.:.:.. .: : . . mKIAA1 SEWKGRTAALGENDSDDKASGESPSEPMPTGRVVGILQK------------NWRDYVVTF 330 340 350 360 350 360 370 380 390 400 mKIAA1 PINGSVTKIFVAEMKDPQQVPIHRLIQGQVQRVRHETLKPEDRSTRLFWVRIVLWRERFY : . : .. :. :.. . . .. ..: : . : . ::: :. mKIAA1 PSKEEVQ----SQGKNAQKILVTPW-DYRIPKIRISTQQAEALQDFRVVVRIDSWEATSV 370 380 390 400 410 420 410 420 430 440 450 mKIAA1 YPLGIVLEVLPK---------AITWEQGLYILDLEHG----LKAHTPD-PASVSKALQRY :: : ..:: . .: :... .. . .. . ..::. : .:: .. mKIAA1 YPNGHFVRVLGRIGDLEGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQE 430 440 450 460 470 480 460 470 480 490 500 510 mKIAA1 RSELNTAAGHREDYRHFLTFTVDPQGACNLDDALSVRDLGP-VYEVAVHIADVASLVPKD :..: :. : :.:..::.: ..::.:::: :. :..::::::. .: . mKIAA1 RKDLRTT--H-------LVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPN 490 500 510 520 530 520 530 540 550 560 570 mKIAA1 GALDVEARQQGTVFYAPNREPVLMLPASLCQDALSLLPGQDRLAISLFLTMEKGGGQIKS . .::::: ..:..: .:. :::. : : ::: : :: :.:.. ..: . .::. mKIAA1 SYIDVEARTRATTYYLADRR-YDMLPSILSADLCSLLGGVDRYAVSVMWELDKTSYEIKK 540 550 560 570 580 590 580 590 600 610 620 mKIAA1 LRFAPSIIRSDRQLSYEEAEELIKRHPGAGLELP--AHLDSVEACVVAACYFSWMLRRQR . .. .:::: .: :: :.::. . . ..: ::. .. . . : . . mKIAA1 VWYGRTIIRSAYKLFYEAAQELLDGNFSIVDDIPELKALDK-QSQQAKLEELVWAIGKLT 600 610 620 630 640 650 630 640 650 660 670 680 mKIAA1 LSAACYYEPPDEDSVLGFRTAHIMVQEYMIQFNSHVAEFLVSNKHTQTLTPLRWQPTPSR : :. ..: .. ... :: .. .... ... .. ::. . : .. mKIAA1 DIARHIRAKRDRCGALELEGVEVRVQ---LDDKKNIRDLIPKQ-------PLEVHETVAE 660 670 680 690 700 690 700 710 720 730 740 mKIAA1 QQLDS---VFKKYRGLVPLSLHLCHHSNTDYTSNKQLHLLTSLWKQVQLAAGTQDYSQMV .. . : :: : . : .: ..:. . : . :.. . .. mKIAA1 CMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECA---KAKGFFIDTRSNKTLA 710 720 730 740 750 760 750 760 770 780 790 800 mKIAA1 D-LIAADDMHPSLAPACLD--LRRALGRSVFGRSSQGKQQPAVHHSLQVDWYTWATSPIR : : .:.: . :. : .:.. ... ... .. :..: .: :: ::::: mKIAA1 DSLDSANDPKDPLVNKLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIR 770 780 790 800 810 820 810 820 830 840 850 mKIAA1 RYLDVVLQRLILLALGH------RGSTYSNRDIDGLCLDFSRQYASAQSYQRRAYSLHLA :: :.:..::.. :... . . .::.... :: .. . .:: :... : mKIAA1 RYSDIVVHRLLMAAISKDKKMEIKENLFSNKNLEELCRHINNRNRAAQRSQKQSTELFQC 830 840 850 860 870 880 860 870 880 890 900 910 mKIAA1 IQLKSQPQNKLGFVVDVEMGARCFKVLFPINRETLPDPCPIHYHSLQLAEHPQELVSQTG . .:.. :.: ::. mKIAA1 MYFKDR---------DAETEERCIADGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDSLVI 890 900 910 920 930 >>mFLJ00327 ( 881 res) mid41093 (881 aa) initn: 298 init1: 117 opt: 396 Z-score: 417.4 bits: 89.3 E(): 4.2e-18 Smith-Waterman score: 446; 28.870% identity (33.740% ungapped) in 575 aa overlap (385-922:301-829) 360 370 380 390 400 410 mKIAA1 IFVAEMKDPQQVPIHRLIQGQVQRVRHETLKPEDRSTRLFWVRIVLWRERFYYPLGIVLE .:.: .. :: ::. :.: . :: . . mFLJ00 FKKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANTLFICRIIDWKEDCNFALGQLAK 280 290 300 310 320 330 420 430 440 450 460 470 mKIAA1 VLPKAITWEQGLYILDLEHGLKAHTPDPASVSKALQRYRSELNT-AAGHREDYRHFLTFT : .: : . :.:. . . : . .:.:.: :. :: mFLJ00 SLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPDEVGKRRDLRKDCIFT 340 350 360 370 380 390 480 490 500 510 520 530 mKIAA1 VDPQGACNLDDALSVRDL-GPVYEVAVHIADVASLVPKDGALD-VEARQQGTVFYAPNRE .::. : .:::::. : : ..::.::::::. .::. ..:: : :.. .:. . . mFLJ00 IDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQKVV 400 410 420 430 440 450 540 550 560 570 580 mKIAA1 PVLMLPASLCQDALSLLPGQDRLAISLF--LTMEKGGGQIKSLRFAPSIIRSDRQLSYEE : ::: ::.. :: : :.:..:.. :: : :.: :. .:::: .:::.. mFLJ00 P--MLPRLLCEELCSLNPMTDKLTFSVIWKLTPE---GKILEEWFGRTIIRSCTKLSYDH 460 470 480 490 500 590 600 610 620 mKIAA1 AEELIKRHPGAGL---EL----PAH-LDSVEACVVAACYFSWMLRRQR------------ :. .:. .: . :: : : .. :. :. .. .::::: mFLJ00 AQSMIE-NPTEKIPEEELPPISPEHSVEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQLK 510 520 530 540 550 560 630 640 650 660 670 680 mKIAA1 LSAACYYEP--PDEDSVLGFRTAHIMVQEYMIQFNSHVAEFLVSNKHTQTLTPLRWQPTP :. . .: :. . .: .. .:.:.:. : ::. . . :.: :: .: : mFLJ00 LAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQAL--LRRHPPP 570 580 590 600 610 620 690 700 710 720 730 740 mKIAA1 SRQQLDSV--FKKYRGLVPLSLHLCHHSNTDYTSNKQLHLLTSLWKQVQLAAGTQDYSQM . ..:... : :: :. : .: :. :: : : . :: mFLJ00 QTKMLSDLVEFCDQMGL-PM----------DVSSAGALN--KSLTKTF----GDDKYS-- 630 640 650 660 750 760 770 780 790 800 mKIAA1 VDLIAADDMHPSLAPACLDLRRALGRSVFGRSSQGKQQPAVHHSLQVDWYTWATSPIRRY .: .. .. ... :: : . :. :..:.: :: ::::::. mFLJ00 ---LARKEVLTNMYSRPMQM--AL---YFCSGMLQDQEQFRHYALNVPLYTHFTSPIRRF 670 680 690 700 710 810 820 830 840 850 mKIAA1 LDVVLQRLILLALGHRGSTYSNRDIDGL------CLDFSRQYASAQSYQRRAYSLHLAIQ ::...::. :::. : . . : : : : :..:: . :. . .: .:. mFLJ00 ADVIVHRLLAAALGY--SEQPDVEPDTLQKQADHCND--RRMAS-KRVQELSIGLFFAVL 720 730 740 750 760 770 860 870 880 890 900 910 mKIAA1 LK-SQPQNKLGFVVDVEMGARCFKVL-FPINRETLPDPCPIHYHSLQLAEHPQELVSQTG .: : : .. ..:. : : :: : .... . .. .:.: . . ::. mFLJ00 VKESGPLESEAMVMGVLNQAFDVLVLRFGVQKRIYCNALALRSYSFQKVGKKPELT---- 780 790 800 810 820 920 930 940 950 960 970 mKIAA1 VRLVWRRRMYSVQASKLPLPLLGTSLDPHTQTVDAALWMKLLMLLKEQRWPEIAALIQEQ :::. mFLJ00 --LVWEPDDLEEEPTQQVITIFSLVDVVLQAEATALKYSAILKRPGLEKASDEEPED 830 840 850 860 870 880 >>mKIAA1008 ( 451 res) mpm08036 (451 aa) initn: 197 init1: 120 opt: 297 Z-score: 315.2 bits: 69.4 E(): 2.1e-12 Smith-Waterman score: 304; 30.827% identity (34.167% ungapped) in 266 aa overlap (318-581:206-447) 290 300 310 320 330 340 mKIAA1 NCGMAFTGDEVLVQILGPAGDDRCVPGSLQGRVMGVLKRRRHELAFVCRMDEWDPRIMIP :::.:..:: .: : mKIAA1 EGQNEDDVEKDEERELLLKTAVSEKMLRPTGRVVGIIKR------------NWRPYC--- 180 190 200 210 220 350 360 370 380 390 400 mKIAA1 INGSVTKIFVAEMKDPQQVPIHRLIQGQVQRVRHETLKPEDRSTRLFWVRIVLWRERFYY : ..: . : . .: . .. :.: :: . : . : : : . : mKIAA1 --GMLSKSDIKESRRHLFTPADK----RIPRIRIETRQASALEGRRIIVAIDGWPRNSRY 230 240 250 260 270 410 420 430 440 450 460 mKIAA1 PLGIVLEVLPKAITWEQGLYILDLEHGLKAHTPDPASVSKALQRYR-SELNTAAGHREDY : : .. : . : .: ::: . : : .: . : :. : . .::: mKIAA1 PNGHFVKNLGDVGEKETETEVLLLEHDVP-HQPFSQAVLSFLPRMPWSITEEDMKNREDL 280 290 300 310 320 330 470 480 490 500 510 520 mKIAA1 RHFLTFTVDPQGACNLDDALSVRDLGP-VYEVAVHIADVASLVPKDGALDVEARQQGTVF ::. . .::: : ..:::: :.:. ::.::::::. .. .::: :. ..::. mKIAA1 RHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 340 350 360 370 380 390 530 540 550 560 570 580 mKIAA1 YAPNREPVLMLPASLCQDALSLLPGQDRLAISLFLTMEKGGGQIKSLRFAPSIIRSDRQL : ... . :.: : .. :: . ::::.: . :.... .:. ::. :.: : mKIAA1 YLCEKR-IDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKT-RFTKSVINSKVSV 400 410 420 430 440 450 590 600 610 620 630 640 mKIAA1 SYEEAEELIKRHPGAGLELPAHLDSVEACVVAACYFSWMLRRQRLSAACYYEPPDEDSVL >>mKIAA0054 ( 1617 res) mbg06166 (1617 aa) initn: 216 init1: 189 opt: 199 Z-score: 204.1 bits: 50.7 E(): 3.2e-06 Smith-Waterman score: 260; 28.315% identity (33.761% ungapped) in 279 aa overlap (1380-1615:813-1089) 1350 1360 1370 1380 1390 1400 mKIAA1 TLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKEDLVVLLGDHKQLRPVVKSEQLQSLGMD .:. .:: ::: :: : : :: . .. mKIAA0 DLEPGFFTHVLLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLH 790 800 810 820 830 840 1410 1420 1430 1440 1450 mKIAA1 RSLFERY--HRDA-----IMLDTQYRMHKDICSFPSVEFYGGKL------KTWSDLRRLP ::..: : : :.: .:: :. : .. : :: ::: . .:. : mKIAA0 VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLT 850 860 870 880 890 900 1460 1470 1480 1490 1500 mKIAA1 --SILGHTGKPSCSVIFGS----------VQGHEQKLLVS---TEDGNENSRANPEEVTQ . :. . . :. : . :. ..: :. .::. . ..: . : mKIAA0 FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGV-VTPY-ADQ 910 920 930 940 950 960 1510 1520 1530 1540 1550 mKIAA1 VVSVRG-LMQRGVTGVTVTSITKSQGSEWRYVIVSTVRTCPRSDVDQRPTKSWLKKF--- : .:. : .. .. :.: . . ::...: ...::::: : : :. . . mKIAA0 VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS 970 980 990 1000 1010 1020 1560 1570 1580 1590 1600 mKIAA1 -----LGFVVDPHQVNVAITRAQEALCIIGDHLLL----RCCPLWHRLLDFCEAQHSL-- ::. . . .:.:::::: . ..:: . : :: .:.:.. .:. .::: mKIAA0 TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPVALCSIGRCRKFWERFIALCHENHSLHG 1030 1040 1050 1060 1070 1080 1610 1620 mKIAA1 VSAEKVRVQRKSALSS .. :....: mKIAA0 ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGNSSRQQQSPPKVKSLYHPQSD 1090 1100 1110 1120 1130 1140 >>mKIAA0083 ( 1078 res) mpm08053 (1078 aa) initn: 147 init1: 118 opt: 181 Z-score: 187.0 bits: 46.9 E(): 2.9e-05 Smith-Waterman score: 207; 26.545% identity (34.434% ungapped) in 275 aa overlap (1379-1604:795-1055) 1350 1360 1370 1380 1390 1400 mKIAA1 ITLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKEDLVVLLGDHKQLRPVVKSEQLQSLGM ::.. ::.:::.:: :.: ... ..::: mKIAA0 HPIFSRKTFDFCIVDEASQISQPVCLGPLFFSRR--FVLVGDHQQLPPLVVNREARALGM 770 780 790 800 810 820 1410 1420 1430 1440 1450 mKIAA1 DRSLFERYHRD---AIMLDTQYRMHKDICSFPSVEFYGGKLKTWSD-----------LR- ..:::.: .:. ...: .::::.. : :. . :.:::. :: :. mKIAA0 SESLFKRLERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLECGSDRVANAVLALPNLKD 830 840 850 860 870 880 1460 1470 1480 mKIAA1 -RL-----------PSILG--HTGKPSCSVIFGSVQGHEQ------------KLLVSTED :: : . : . .: : . .: . :: .:.: . mKIAA0 ARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAPEQVENGGVSNVTEARLIVFLTS 890 900 910 920 930 940 1490 1500 1510 1520 1530 mKIAA1 GNENSRANPEEVTQVVSVR-------GLMQRGVTG-VTVTSITKSQGSEWRYVIVSTVRT .. .: .. .. : :. :. .: : :... : :: . ..:: ::. mKIAA0 TFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRS 950 960 970 980 990 1000 1540 1550 1560 1570 1580 1590 mKIAA1 CPRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCCPLWHRLLDF . . . :.: ...:::.:::.. : ..:. :. : :.: mKIAA0 NEDGTLGEL-LKDW-----------RRLNVALTRAKHKLILLGSVSSLKRFPPLGTLFDH 1010 1020 1030 1040 1050 1600 1610 1620 mKIAA1 CEAQHSLVSAEKVRVQRKSALSS .:.. mKIAA0 LNAEQLILDLPSREHESLSHILGDCQRD 1060 1070 >>mKIAA1631 ( 1027 res) mej00871 (1027 aa) initn: 245 init1: 142 opt: 177 Z-score: 182.9 bits: 46.1 E(): 4.8e-05 Smith-Waterman score: 235; 26.937% identity (34.597% ungapped) in 271 aa overlap (1385-1601:699-963) 1360 1370 1380 1390 1400 1410 mKIAA1 IRQAPNPYAAEIRKFDAQLREGKIFSKEDLVVLLGDHKQLRPVVKSEQLQSLGMDRSLFE .:: :: .:: ::..: . :. ::.: mKIAA1 DEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLALKHGLGYSLLE 670 680 690 700 710 720 1420 1430 1440 1450 mKIAA1 R-------YHRDAIMLDTQ--------YRMHKDICSFPSVEFYGGKLKTWSDLRRLPSIL : :.. : : :: : : ..:. .: :.:.. .:. . mKIAA1 RLLAYNSLYKKGPNGYDPQFITKLLRNYRSHPTILDIPNQLYYDGELQACADVVDRERFC 730 740 750 760 770 780 1460 1470 1480 1490 mKIAA1 GHTGKP--SCSVIFGSVQGHEQ---------------------KLLVSTEDGNENSRANP : : . .:: .:.:... : :.. . . ..: .: mKIAA1 RWEGLPQQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSP 790 800 810 820 830 840 1500 1510 1520 1530 1540 mKIAA1 EEV-------TQVVSVRGLMQ------RG---VTGVTVTSITKSQGSEWRYVIVSTVRTC ..: :: ..: . :: . . : :. . ::.: ...::::. mKIAA1 RNVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRS- 850 860 870 880 890 900 1550 1560 1570 1580 1590 1600 mKIAA1 PRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCCPLWHRLLDFC .: .. : :::. .:.. :::.:::. : ..:. ::: : :. .:.:: mKIAA1 -----SQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPDWKTFLEFC 910 920 930 940 950 960 1610 1620 mKIAA1 EAQHSLVSAEKVRVQRKSALSS . mKIAA1 KENGGYTGCPFPAKLDLQQGQDLLQGLSKLSPSTSGPRRHQNLPQEREGEGGLPLQVEPE 970 980 990 1000 1010 1020 >>mKIAA0560 ( 1500 res) mbg02505 (1500 aa) initn: 114 init1: 81 opt: 148 Z-score: 150.0 bits: 40.6 E(): 0.0033 Smith-Waterman score: 149; 26.540% identity (30.939% ungapped) in 211 aa overlap (1379-1574:1108-1303) 1350 1360 1370 1380 1390 1400 mKIAA1 ITLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKEDLVVLLGDHKQLRPVVKSEQLQSLG- ::. ...:::.:: ::.:. .:. . mKIAA0 KYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1080 1090 1100 1110 1120 1130 1410 1420 1430 1440 1450 1460 mKIAA1 MDRSLFERYHR---DAIMLDTQYRMHKDICSFPSVEFYGGKLKTWSDLRRLPSILGHTGK :..::: :. : .. ::.: : . ..:.. :. . : .: :: . mKIAA0 MEQSLFTRFVRVGVPTVDLDAQGRARASLCNL-----YNWRYK---NLGNLPHV---QLL 1140 1150 1160 1170 1180 1470 1480 1490 1500 1510 mKIAA1 PSCSVIFGSVQGHEQKLLVSTED--GNENSRANPE------EVTQVVSVRGLM-QRGVTG : :. ... : :...:: : .:. :: :. ::.. : : . mKIAA0 PEFSTANAGLLYDFQ--LINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPA 1190 1200 1210 1220 1230 1240 1520 1530 1540 1550 1560 1570 mKIAA1 VTVTSITKSQGSEWRYVIVSTV-RTCPRSDVDQRPTK-SWLKKFLGFVVDPHQVNVAITR .. .: .:. ...: . . : : . . ::.: . . .: : : .... :: mKIAA0 DKISILTTYNGQ--KHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR 1250 1260 1270 1280 1290 1300 1580 1590 1600 1610 1620 mKIAA1 AQEALCIIGDHLLLRCCPLWHRLLDFCEAQHSLVSAEKVRVQRKSALSS : mKIAA0 AVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFP 1310 1320 1330 1340 1350 1360 1622 residues in 1 query sequences 1767395 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:52:50 2006 done: Mon Mar 27 10:52:52 2006 Scan time: 1.330 Display time: 0.480 Function used was FASTA [version 3.4t11 Apr 17, 2002]