FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00359.ptfa, 1108 aa vs ./tmplib.26680 library 1767909 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.2866+/-0.00457; mu= 21.1359+/- 0.306 mean_var=93.8273+/-21.394, 0's: 0 Z-trim: 5 B-trim: 41 in 1/35 Lambda= 0.1324 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00348 ( 1089 res) mth00001 (1089) 158 41 0.00087 >>mFLJ00348 ( 1089 res) mth00001 (1089 aa) initn: 413 init1: 104 opt: 158 Z-score: 160.3 bits: 41.5 E(): 0.00087 Smith-Waterman score: 454; 25.029% identity (29.332% ungapped) in 859 aa overlap (19-786:238-1061) 10 20 30 40 mFLJ00 PESEPDAVFQYLKENAQEVLLIFDGLDEAL----HADSVGTDNAGSAL :::..::::: ..... .. . . mFLJ00 TYEKLSADRLIQSIFSSIGEASLVATAPDRVLLVLDGLDECKTPLEFSNTMACSDPKKEI 210 220 230 240 250 260 50 60 70 80 90 mFLJ00 T---LFSELCHGNLLPGCWVMTTSRP---GKLPSCVPTEAATVHMWGFDGLRVEKYVTCF :.... .:::.: : :::: :..:. . . . .. :: :. .:. mFLJ00 QVDHLITNIIRGNLFPEISVWITSRPSAAGQIPGGLVDRMTEIR-----GLTEEEIKVCL 270 280 290 300 310 320 100 110 120 130 140 150 mFLJ00 ---F---SDLLSQELALKEMRTNARLRGMCAIPALCTVTCFCLRRLLPGSSPGQSAAL-L : ..::.: .:.....: : ::..::.: .: . : .: :. : : mFLJ00 EQMFPEEQNLLGQ--VLSQVQANRALYLMCTVPAFCRLTGLALGHLYRTRLAVQDIELPL 330 340 350 360 370 380 160 170 180 190 mFLJ00 P-TITQL---YLQMV--------ETFSP---SETLLDTSILG-FGKVALRGLDTGKVVFS : :. .: :..:. : :: . : ...: .:..:..:: : :: mFLJ00 PQTLCELYSWYFRMALGGEGQDKEKVSPRIKQVTQGARKMVGTLGRLAFHGLVKKKYVFY 390 400 410 420 430 440 200 210 220 230 240 250 mFLJ00 VEDISPQLMASGAVHSLLTSFCIHTRPGH--EEIGYAFVHLSLQEFFAALYLM-ASHTVD .:.. . . ... : : :. : ..: :.::::::: :: : . ::. . mFLJ00 EQDMKAFGVDLALLQNTLCS-CLLQREETLASSVAYCFIHLSLQEFVAATYYYSASKRAI 450 460 470 480 490 260 270 280 290 300 mFLJ00 KDTLVE------YVTLNSHW---VLR-TKGRLGLSDHLPAFLAGLASHTCHTFLCQ--LA : ..: . . .:. . : :... : : . ::.:: : .:.: :. mFLJ00 FDLFTESGMSWPRLGFLAHFRCAAQRATQAKDGRLDVFLRFLSGLLSPRVNTLLAGSLLS 500 510 520 530 540 550 310 320 330 340 350 mFLJ00 QQDRAWVGSRQAAVIQVLRKLASRKLTGPKMIELYHCVAETQDLELARFTAQSLPS-CLS : .. .. : :.: . : . . :.. .:..: . ::: . ... : :. mFLJ00 QGEHQSYRDQVAEVLQGF--LHPDAAVCARAINVLYCLSELRHTELACSVEEAMRSGTLA 560 570 580 590 600 610 360 370 380 390 mFLJ00 FHKFPLTHADLAALANILEHRD--DPIHLDFDGC-------PLEP---HC---------- : .: .::: .:. : .: . ::. : : : .: mFLJ00 GMTSP-SHR--TALAYLLQMSDICSP-EADFSLCLSQHVLQSLLPQLLYCQSLRLDNNQF 620 630 640 650 660 670 400 410 420 430 440 mFLJ00 --P-EALVG-------CGQVENLSFKSRKCGDAFAEALCRSLPTMGSLKTLGLTGSRITA : :.: : .....:. . :. :.:: ::: . :: :: : .. : mFLJ00 QDPVMELLGSVLSGKDC-RIRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGP 680 690 700 710 720 730 450 460 470 480 490 500 mFLJ00 QGISHLIQTLPLCSQLEEVSLHDNQLKDPEVLSLVELLPSLPKLQKLDLSRNSFSRSILL : . : ..: . : .::..: .:: :. ..: : : .. :.:..: :. mFLJ00 PGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKN------LI 740 750 760 770 780 510 520 530 540 550 560 mFLJ00 SLVKVAITCPTVRKLQVRELDLIFYLSPVTETATQQSGASDIQGKDSLKEGQSRSLQLRL .:. . ... : : : ... : .. . :: : ..:: .: .: : mFLJ00 GLIGAQQMADALK--QNRSLKALMFSS----NTIGDRGA--IALAEALKVNQILE-NLDL 790 800 810 820 830 570 580 590 600 610 620 mFLJ00 QKCQLRIRDAEALVELFQKSPQLEEVNLSGNHLEDDGCRLVAEATSQLHIAQKLDLSDNG :. .. . .:.. . .. : .:: : . .: . ...: . . ..:::. : mFLJ00 QSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANL 840 850 860 870 880 890 630 640 650 660 670 mFLJ00 LSQTGVTYVLKAMSTCGTLEDLHIS----------LLSNTVVLTFAQEPREQEGSCKGRA : . :. . :.. .: ::.. :.... :. . . . . : mFLJ00 LHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDE 900 910 920 930 940 950 680 690 700 710 720 730 mFLJ00 PLISFVSPVTSELSQRSRRIRLTHCGFLAKHTETLCEALRASCQTHNLDHLDLSDNSLGG : .. . . . . .... : .. ...: ::: .. ..:. ::: :..:. mFLJ00 GASSVAGALKVNTTLIALYLQVASIG--SQGAQALGEALTVN---RTLEILDLRGNDVGA 960 970 980 990 1000 1010 740 750 760 770 780 790 mFLJ00 KGVILLTELLPGLGPLKSLNLSRNGLSMDAVFSLVQCLSSLQWVFHLDVSLESDCIFLRG :. :.. : . :. :::..:.:.::... ... :: . . :.... mFLJ00 AGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAAR 1020 1030 1040 1050 1060 1070 800 810 820 830 840 850 mFLJ00 AGTSRDALEPKFQTGVQVLELSQQYTSRSFCLQECQLEPTSLTFLCATLEKSPGPLEVQL mFLJ00 MISEAIKTNAPTCTVEI 1080 1108 residues in 1 query sequences 1767909 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:09:41 2006 done: Mon Mar 27 10:09:42 2006 Scan time: 1.100 Display time: 0.080 Function used was FASTA [version 3.4t11 Apr 17, 2002]