# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msp04035.fasta.nr -Q ../query/mKIAA0149.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0149, 827 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7895966 sequences Expectation_n fit: rho(ln(x))= 5.8402+/-0.000204; mu= 11.2616+/- 0.011 mean_var=129.0639+/-24.475, 0's: 35 Z-trim: 124 B-trim: 142 in 2/63 Lambda= 0.112894 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|56800142|emb|CAI35389.1| scavenger receptor cla ( 820) 6217 1024.6 0 gi|74225686|dbj|BAE21676.1| unnamed protein produc ( 820) 6208 1023.1 0 gi|148680872|gb|EDL12819.1| scavenger receptor cla ( 817) 6183 1019.0 0 gi|148680873|gb|EDL12820.1| scavenger receptor cla ( 774) 5800 956.6 0 gi|149053408|gb|EDM05225.1| rCG35217 [Rattus norve ( 823) 5631 929.1 0 gi|20140022|sp|Q14162.2|SREC_HUMAN RecName: Full=E ( 830) 4313 714.5 4.6e-203 gi|33598929|ref|NP_003684.2| scavenger receptor cl ( 830) 4307 713.5 9e-203 gi|158257052|dbj|BAF84499.1| unnamed protein produ ( 830) 4296 711.7 3.1e-202 gi|73967353|ref|XP_853984.1| PREDICTED: similar to ( 829) 4241 702.7 1.6e-199 gi|220938230|emb|CAX15547.1| scavenger receptor cl ( 478) 3746 621.8 2e-175 gi|51480441|gb|AAH80288.1| Scarf1 protein [Mus mus ( 474) 3724 618.3 2.4e-174 gi|109112699|ref|XP_001117324.1| PREDICTED: scaven ( 610) 3416 568.2 3.6e-159 gi|21685560|dbj|BAC02694.1| SREC-3 [Homo sapiens] ( 569) 3129 521.4 4e-145 gi|33598931|ref|NP_663325.1| scavenger receptor cl ( 569) 3124 520.6 7.1e-145 gi|194217417|ref|XP_001502343.2| PREDICTED: simila ( 671) 2836 473.8 1e-130 gi|118100153|ref|XP_001234823.1| PREDICTED: simila ( 778) 2768 462.8 2.5e-127 gi|126314219|ref|XP_001371230.1| PREDICTED: simila (1059) 2717 454.6 9.6e-125 gi|189528962|ref|XP_001344375.2| PREDICTED: simila ( 891) 2439 409.3 3.7e-111 gi|21685562|dbj|BAC02695.1| SREC-4 [Homo sapiens] ( 337) 2225 373.9 6e-101 gi|21685558|dbj|BAC02693.1| SREC-2 [Homo sapiens] ( 342) 2225 373.9 6e-101 gi|21685564|dbj|BAC02696.1| SREC-5 [Homo sapiens] ( 744) 2189 368.5 5.9e-99 gi|119611003|gb|EAW90597.1| scavenger receptor cla ( 744) 2179 366.8 1.8e-98 gi|145309306|ref|NP_663327.2| scavenger receptor c ( 744) 2173 365.9 3.6e-98 gi|119909731|ref|XP_606519.3| PREDICTED: similar t ( 838) 2082 351.1 1.1e-93 gi|33598937|ref|NP_878315.1| scavenger receptor cl ( 865) 2064 348.2 8.7e-93 gi|24079414|gb|AAN45861.1| scavenger receptor type ( 870) 2061 347.7 1.2e-92 gi|149019757|gb|EDL77905.1| scavenger receptor cla ( 833) 2056 346.9 2.1e-92 gi|47606791|sp|Q96GP6.3|SREC2_HUMAN RecName: Full= ( 866) 2051 346.1 3.8e-92 gi|119623371|gb|EAX02966.1| scavenger receptor cla ( 871) 2050 345.9 4.3e-92 gi|27372855|dbj|BAC53753.1| SRECRP-1 [Homo sapiens ( 866) 2040 344.3 1.3e-91 gi|27805730|sp|P59222.1|SREC2_MOUSE RecName: Full= ( 833) 2039 344.1 1.4e-91 gi|109093346|ref|XP_001084100.1| PREDICTED: simila ( 779) 2000 337.7 1.1e-89 gi|224072327|ref|XP_002187235.1| PREDICTED: scaven (1119) 1938 327.8 1.6e-86 gi|149449509|ref|XP_001518868.1| PREDICTED: simila ( 817) 1900 321.4 9.2e-85 gi|189538508|ref|XP_001920171.1| PREDICTED: simila ( 896) 1880 318.2 9.4e-84 gi|148665067|gb|EDK97483.1| scavenger receptor cla ( 476) 1862 315.0 4.7e-83 gi|47221482|emb|CAG08144.1| unnamed protein produc ( 830) 1857 314.4 1.2e-82 gi|194385014|dbj|BAG60884.1| unnamed protein produ ( 424) 1555 264.9 4.9e-68 gi|149561890|ref|XP_001519413.1| PREDICTED: simila ( 433) 1509 257.4 9e-66 gi|119611005|gb|EAW90599.1| scavenger receptor cla ( 365) 1359 232.9 1.8e-58 gi|194043404|ref|XP_001927261.1| PREDICTED: scaven ( 519) 1330 228.4 6e-57 gi|118098811|ref|XP_001234051.1| PREDICTED: simila ( 285) 1190 205.3 3e-50 gi|149413547|ref|XP_001515881.1| PREDICTED: simila ( 229) 1085 188.1 3.6e-45 gi|194208134|ref|XP_001915428.1| PREDICTED: multip (1544) 1093 190.3 5.2e-45 gi|25058485|gb|AAH39980.1| Multiple EGF-like-domai ( 546) 1065 185.2 6.1e-44 gi|73956667|ref|XP_546739.2| PREDICTED: similar to (1534) 1054 184.0 4.2e-43 gi|74000897|ref|XP_544734.2| PREDICTED: similar to (1153) 1025 179.1 9.2e-42 gi|224079670|ref|XP_002192764.1| PREDICTED: hypoth (1576) 1026 179.4 1e-41 gi|7510359|pir||T27283 hypothetical protein Y64G10 (1620) 1020 178.5 2e-41 gi|126307858|ref|XP_001375252.1| PREDICTED: hypoth (1045) 1017 177.7 2.1e-41 >>gi|56800142|emb|CAI35389.1| scavenger receptor class F (820 aa) initn: 6217 init1: 6217 opt: 6217 Z-score: 5478.0 bits: 1024.6 E(): 0 Smith-Waterman score: 6217; 100.000% identity (100.000% similar) in 820 aa overlap (8-827:1-820) 10 20 30 40 50 60 mKIAA0 IKPGPPTMLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPSELQCCPGWRQKDQ ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 MLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPSELQCCPGWRQKDQ 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 ECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 ECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 CEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPASR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 CEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPASR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 CDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 CDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 VTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 VTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGT 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 QCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGKGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 QCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGKGC 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVSGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 SSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVSGT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 CQLGRHGKNALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRPERNGAAFFRMKQQVWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 CQLGRHGKNALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRPERNGAAFFRMKQQVWG 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 ALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 ALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEE 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 DEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPSVSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 DEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPSVSF 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 AEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPTATS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 AEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPTATS 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 SGDPATSHGQLPPGSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 SGDPATSHGQLPPGSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRRL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 GNYQKDQMDPKVKSAIPKPLRRSLGRNQASAGSAPGAVLSQAMESTAVRPEETPRGLGDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 GNYQKDQMDPKVKSAIPKPLRRSLGRNQASAGSAPGAVLSQAMESTAVRPEETPRGLGDG 720 730 740 750 760 770 790 800 810 820 mKIAA0 IESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPPQH ::::::::::::::::::::::::::::::::::::::::::::::: gi|568 IESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPPQH 780 790 800 810 820 >>gi|74225686|dbj|BAE21676.1| unnamed protein product [M (820 aa) initn: 7062 init1: 6208 opt: 6208 Z-score: 5470.1 bits: 1023.1 E(): 0 Smith-Waterman score: 6208; 99.878% identity (100.000% similar) in 820 aa overlap (8-827:1-820) 10 20 30 40 50 60 mKIAA0 IKPGPPTMLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPSELQCCPGWRQKDQ ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 MLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPSELQCCPGWRQKDQ 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 ECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 ECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 CEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPASR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 CEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPASR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 CDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 CDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 VTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 VTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGT 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 QCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGKGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 QCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGKGC 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVSGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 SSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVSGT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 CQLGRHGKNALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRPERNGAAFFRMKQQVWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 CQLGRHGKNALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRPERNGAAFFRMKQQVWG 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 ALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 ALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEE 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 DEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPSVSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPSVSF 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 AEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPTATS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 AEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPTATS 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 SGDPATSHGQLPPGSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 SGDPATSHGQLPPGSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRRL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 GNYQKDQMDPKVKSAIPKPLRRSLGRNQASAGSAPGAVLSQAMESTAVRPEETPRGLGDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 GNYQKDQMDPKVKSAIPKPLRRSLGRNQASAGSAPGAVLSQAMESTAVRPEETPRGLGDG 720 730 740 750 760 770 790 800 810 820 mKIAA0 IESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPPQH ::::::::::::::::::::::::::::::::::::::::::::::. gi|742 IESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPPQN 780 790 800 810 820 >>gi|148680872|gb|EDL12819.1| scavenger receptor class F (817 aa) initn: 3723 init1: 3723 opt: 6183 Z-score: 5448.1 bits: 1019.0 E(): 0 Smith-Waterman score: 6183; 99.878% identity (99.878% similar) in 817 aa overlap (12-827:1-817) 10 20 30 40 50 60 mKIAA0 IKPGPPTMLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPSELQCCPGWRQKDQ ::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPSELQCCPGWRQKDQ 10 20 30 40 70 80 90 100 110 120 mKIAA0 ECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQ 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 CEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPASR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPASR 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 CDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCS 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 VTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGT 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 QCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGKGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGKGC 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA0 SSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVSGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVSGT 350 360 370 380 390 400 430 440 450 460 470 mKIAA0 CQLGRHGKNALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDR-PERNGAAFFRMKQQVW ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|148 CQLGRHGKNALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRRPERNGAAFFRMKQQVW 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 GALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGE 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 EDEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EDEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPSVS 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 FAEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPTAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FAEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPTAT 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 SSGDPATSHGQLPPGSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SSGDPATSHGQLPPGSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRR 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA0 LGNYQKDQMDPKVKSAIPKPLRRSLGRNQASAGSAPGAVLSQAMESTAVRPEETPRGLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LGNYQKDQMDPKVKSAIPKPLRRSLGRNQASAGSAPGAVLSQAMESTAVRPEETPRGLGD 710 720 730 740 750 760 780 790 800 810 820 mKIAA0 GIESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPPQH :::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GIESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPPQH 770 780 790 800 810 >>gi|148680873|gb|EDL12820.1| scavenger receptor class F (774 aa) initn: 5800 init1: 5800 opt: 5800 Z-score: 5111.2 bits: 956.6 E(): 0 Smith-Waterman score: 5800; 100.000% identity (100.000% similar) in 762 aa overlap (66-827:13-774) 40 50 60 70 80 90 mKIAA0 AGQHVCKGSSPSELQCCPGWRQKDQECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQ :::::::::::::::::::::::::::::: gi|148 TLLVSTSVKAAAICEGPDACRKEEVCVKPGLCRCKPGFFGAQ 10 20 30 40 100 110 120 130 140 150 mKIAA0 CSSRCPGQYWGHDCRETCPCHPRGQCEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CSSRCPGQYWGHDCRETCPCHPRGQCEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKT 50 60 70 80 90 100 160 170 180 190 200 210 mKIAA0 GLCHCDPGWWSPTCRRPCQCNPASRCDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GLCHCDPGWWSPTCRRPCQCNPASRCDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSG 110 120 130 140 150 160 220 230 240 250 260 270 mKIAA0 RCVCLPGWWGPECSRKCQCVRGQCSVTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RCVCLPGWWGPECSRKCQCVRGQCSVTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCG 170 180 190 200 210 220 280 290 300 310 320 330 mKIAA0 HCELNATCSPVTGNCESCKPGWNGTQCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HCELNATCSPVTGNCESCKPGWNGTQCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHC 230 240 250 260 270 280 340 350 360 370 380 390 mKIAA0 QHCDPGWLGHRCENPCPLGTFGKGCSSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QHCDPGWLGHRCENPCPLGTFGKGCSSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCP 290 300 310 320 330 340 400 410 420 430 440 450 mKIAA0 AGFHGNNCSMPCQCPEGLCHPVSGTCQLGRHGKNALIVGILVPLLLLLMGIVCCAYCCSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AGFHGNNCSMPCQCPEGLCHPVSGTCQLGRHGKNALIVGILVPLLLLLMGIVCCAYCCSG 350 360 370 380 390 400 460 470 480 490 500 510 mKIAA0 TRLDPKDRPERNGAAFFRMKQQVWGALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TRLDPKDRPERNGAAFFRMKQQVWGALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNH 410 420 430 440 450 460 520 530 540 550 560 570 mKIAA0 SFIEPPSAGWASDDSFSSDPDSGEEDEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SFIEPPSAGWASDDSFSSDPDSGEEDEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPP 470 480 490 500 510 520 580 590 600 610 620 630 mKIAA0 EDASTPFPIPRTSSLARAKRPSVSFAEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EDASTPFPIPRTSSLARAKRPSVSFAEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRP 530 540 550 560 570 580 640 650 660 670 680 690 mKIAA0 EGQEAEESTGPEQVNTEEDAPTATSSGDPATSHGQLPPGSQMVAECAETTDGGIQESSGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EGQEAEESTGPEQVNTEEDAPTATSSGDPATSHGQLPPGSQMVAECAETTDGGIQESSGS 590 600 610 620 630 640 700 710 720 730 740 750 mKIAA0 VATIYMLAGTPQKPEGPVWSVFRRLGNYQKDQMDPKVKSAIPKPLRRSLGRNQASAGSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VATIYMLAGTPQKPEGPVWSVFRRLGNYQKDQMDPKVKSAIPKPLRRSLGRNQASAGSAP 650 660 670 680 690 700 760 770 780 790 800 810 mKIAA0 GAVLSQAMESTAVRPEETPRGLGDGIESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GAVLSQAMESTAVRPEETPRGLGDGIESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLY 710 720 730 740 750 760 820 mKIAA0 ENVVPMSVPPQH :::::::::::: gi|148 ENVVPMSVPPQH 770 >>gi|149053408|gb|EDM05225.1| rCG35217 [Rattus norvegicu (823 aa) initn: 5955 init1: 5293 opt: 5631 Z-score: 4962.2 bits: 929.1 E(): 0 Smith-Waterman score: 5631; 90.000% identity (95.366% similar) in 820 aa overlap (8-821:1-820) 10 20 30 40 50 60 mKIAA0 IKPGPPTMLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPSELQCCPGWRQKDQ ::.:::: :::::::.::. ::::::::::::: :::::::::: ::::::: gi|149 MLTAMGLGLVFSLLLFWTREIQGSTLDPAGQHVCIGSSPSELQCCSGWRQKDQ 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 ECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQ :::::::::::::.:.::::::::::::::::::.::::::::::: ::::::::::::: gi|149 ECTIPICEGPDACKKDEVCVKPGLCRCKPGFFGAHCSSRCPGQYWGPDCRETCPCHPRGQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 CEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPASR :::::: :::::::::.::::::::::::.::::::::::::::::::::::::::: .: gi|149 CEPATGVCQCQPNYWGKLCEFPCTCGPHGKCDPKTGLCHCDPGWWSPTCRRPCQCNPLAR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 CDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCS :::.::.:.:: ::::.:::::::::::::.::::::.:: :::::::::.::::::::: gi|149 CDQVTGACICPTGWWGHRCSFSCNCHTSPCLQDSGRCTCLQGWWGPECSRRCQCVRGQCS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 VTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGT ::::::::::::.: :::::.::.::::::::::::: ::::::::::::::::::::: gi|149 VTSGHCSCPPGFQGALCELPCKPGRYGAQCKESCGHCEPNATCSPVTGNCESCKPGWNGT 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 QCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGKGC ::::::: :::::::::.:::::: ::::.::::::.:::::::::::.::::::::::: gi|149 QCKQPCPPGTFGERCTGKCPRCRLEEPCQVETGHCQRCDPGWLGHRCEKPCPLGTFGKGC 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVSGT :::::::.::::.::::::::::::::::::::::.:::::::::::::::::::: ::. gi|149 SSTCPACVQGTCNAVTGECVCSAGYWGTSCNSSCPSGFHGNNCSMPCQCPEGLCHPESGA 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 CQLGRHGKNALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRPERNGAAFFRMKQQVWG :::: :::::::::::::::::::::.::.::::..:::::::::::::::::::::::: gi|149 CQLGPHGKNALIVGILVPLLLLLMGIICCVYCCSASRLDPKDRPERNGAAFFRMKQQVWG 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 ALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEE :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ALTSLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEE 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 DEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPSVSF :::::::.::::: :::.::::: :::::: ::::::::::::::::::::::::::::: gi|149 DEAHAYFMPPREETVPMTQEESPAASLPGGPFPPPEDASTPFPIPRTSSLARAKRPSVSF 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 AEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPTATS :::::::::::::::::::::::::::::::::::::::::::::::: : :::.::::: gi|149 AEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQENPEEDVPTATS 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 SGDPATSHGQLPPGSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRRL ::: :::::::::::. :.::.:::::::::::::::::::::::::::::::::::::: gi|149 SGDAATSHGQLPPGSRTVTECVETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRRL 660 670 680 690 700 710 730 740 750 760 770 mKIAA0 GNYQKDQMDPKVKSAIPKPLRRSLGRNQASAG------SAPGAVLSQAMESTAVRPEETP ::::::: :::::::::::::::::::::.: :::::::: :::::::.:::. gi|149 GNYQKDQAAPKVKSAIPKPLRRSLGRNQASSGLSQSSGSAPGAVLSGAMESTAVKPEEAS 720 730 740 750 760 770 780 790 800 810 820 mKIAA0 RGLGDGIESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPPQH ::::::::: :::::: .:.:: :: :::::::.::::::::::::: gi|149 RGLGDGIESLGTVQEPVVGSSSPEQGSQKQAEEQEQEEPLYENVVPMLQH 780 790 800 810 820 >>gi|20140022|sp|Q14162.2|SREC_HUMAN RecName: Full=Endot (830 aa) initn: 3147 init1: 1667 opt: 4313 Z-score: 3802.0 bits: 714.5 E(): 4.6e-203 Smith-Waterman score: 4538; 71.532% identity (85.404% similar) in 829 aa overlap (12-826:1-829) 10 20 30 40 50 mKIAA0 IKPGPPTMLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPS-ELQCCPGWRQKD ::: :.. ::::::.::::: ::: ::::: .:::: ::::: :::::: gi|201 MGLGLLLPLLLLWTRGTQGSELDPKGQHVCVASSPSAELQCCAGWRQKD 10 20 30 40 60 70 80 90 100 110 mKIAA0 QECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRG ::::::::::::::.:.::::::::::::::::::.::::::::::: ::::.:::::.: gi|201 QECTIPICEGPDACQKDEVCVKPGLCRCKPGFFGAHCSSRCPGQYWGPDCRESCPCHPHG 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 QCEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPAS ::::::: :::: . :: :::::.:::::.::: ::.:::.::::: ::::::::: :. gi|201 QCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRRPCQCNTAA 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 -RCDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQ ::.::::.::: :::::::::: :::: ::: ::::::.: ::::::::...:.::::. gi|201 ARCEQATGACVCKPGWWGRRCSFRCNCHGSPCEQDSGRCACRPGWWGPECQQQCECVRGR 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 CSVTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWN ::..::.:.:::::.: :::::: : .:.:: .:::.:. : ::: ::.::::.:::: gi|201 CSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWN 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 GTQCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGK ::::.::: ::::: : :::.:: :: :. .:::::.::::::: :::.::: ::::. gi|201 GTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDTGHCQRCDPGWLGPRCEDPCPTGTFGE 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA0 GCSSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVS :.::::.:.::.::.:::.::::::::: :::.::::::::::::.::.:::::::::: gi|201 DCGSTCPTCVQGSCDTVTGDCVCSAGYWGPSCNASCPAGFHGNNCSVPCECPEGLCHPVS 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 GTCQLGRHGKN-ALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRPERNGAAFFRMKQQ :.:: : ... ::::: :::::::..:..::: :: . : : :::: :.::. ::: : gi|201 GSCQPGSGSRDTALIVGSLVPLLLLFLGLACCACCCWAPRSDLKDRPARDGATVSRMKLQ 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 VWGALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDS :::.::.:::.::: :::..:::::::::::::::::::::::::::::.::::::::.: gi|201 VWGTLTSLGSTLPCRSLSSHKLPWVTVSHHDPEVPFNHSFIEPPSAGWATDDSFSSDPES 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 GEEDEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPS :: ::. :: :::.: :::.:: : :::: .:.::::::::::: :::::::::::::: gi|201 GEADEVPAYCVPPQEGMVPVAQAGSSEASLAAGAFPPPEDASTPFAIPRTSSLARAKRPS 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 VSFAEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPT ::::::::::::. ::::.::::.::::::::::: :::.::::::::..... :. :. gi|201 VSFAEGTKFAPQSRRSSGELSSPLRKPKRLSRGAQSGPEGREAEESTGPDEAEAPESFPA 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 ATSSGDPATSHGQLPPGSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVF :.: :: ::.: . : ::. ::: .:. .:..::::: :.::::::: :. :::: ::: gi|201 AASPGDSATGHRRPPLGSRTVAEHVEAIEGSVQESSGPVTTIYMLAGKPRGSEGPVRSVF 650 660 670 680 690 700 720 730 740 750 760 mKIAA0 RRLGNYQKDQMDPKVKSAIPKPLRRSLGRNQASAG-----------SAPGAVLSQAMEST :..:..:: : . ::: ::::: :..:.:...: : ::: : : : gi|201 RHFGSFQKGQAEAKVKRAIPKPPRQALNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPM 710 720 730 740 750 760 770 780 790 800 810 820 mKIAA0 AVRPEETPRGLGDGIESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPPQ ::::::. :::: : ::: .::: .: .: ::: ::::::..:::: ::::::.: ::. gi|201 AVRPEEAVRGLGAGTESSRRAQEPVSGCGSPEQDPQKQAEEERQEEPEYENVVPISRPPE 770 780 790 800 810 820 mKIAA0 H gi|201 P 830 >>gi|33598929|ref|NP_003684.2| scavenger receptor class (830 aa) initn: 3141 init1: 1671 opt: 4307 Z-score: 3796.7 bits: 713.5 E(): 9e-203 Smith-Waterman score: 4532; 71.411% identity (85.404% similar) in 829 aa overlap (12-826:1-829) 10 20 30 40 50 mKIAA0 IKPGPPTMLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPS-ELQCCPGWRQKD ::: :.. ::::::.::::: ::: ::::: .:::: ::::: :::::: gi|335 MGLGLLLPLLLLWTRGTQGSELDPKGQHVCVASSPSAELQCCAGWRQKD 10 20 30 40 60 70 80 90 100 110 mKIAA0 QECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRG ::::::::::::::.:.::::::::::::::::::.::::::::::: ::::.:::::.: gi|335 QECTIPICEGPDACQKDEVCVKPGLCRCKPGFFGAHCSSRCPGQYWGPDCRESCPCHPHG 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 QCEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPAS ::::::: :::: . :: :::::.:::::.::: ::.:::.::::: ::::::::: :. gi|335 QCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRRPCQCNTAA 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 -RCDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQ ::.::::.::: :::::::::: :::: ::: ::::::.: ::::::::...:.::::. gi|335 ARCEQATGACVCKPGWWGRRCSFRCNCHGSPCEQDSGRCACRPGWWGPECQQQCECVRGR 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 CSVTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWN ::..::.:.:::::.: :::::: : .:.:: .:::.:. : ::: ::.::::.:::: gi|335 CSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWN 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 GTQCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGK ::::.::: ::::: : :::.:: :: :. .:::::.::::::: :::.::: ::::. gi|335 GTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDTGHCQRCDPGWLGPRCEDPCPTGTFGE 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA0 GCSSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVS :.::::.:.::.::.:::.::::::::: :::.::::::::::::.::.:::::::::: gi|335 DCGSTCPTCVQGSCDTVTGDCVCSAGYWGPSCNASCPAGFHGNNCSVPCECPEGLCHPVS 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 GTCQLGRHGKN-ALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRPERNGAAFFRMKQQ :.:: : ... :::.: :::::::..:..::: :: . : : :::: :.::. ::: : gi|335 GSCQPGSGSRDTALIAGSLVPLLLLFLGLACCACCCWAPRSDLKDRPARDGATVSRMKLQ 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 VWGALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDS :::.::.:::.::: :::..:::::::::::::::::::::::::::::.::::::::.: gi|335 VWGTLTSLGSTLPCRSLSSHKLPWVTVSHHDPEVPFNHSFIEPPSAGWATDDSFSSDPES 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 GEEDEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPS :: ::. :: :::.: :::.:: : :::: .:.::::::::::: :::::::::::::: gi|335 GEADEVPAYCVPPQEGMVPVAQAGSSEASLAAGAFPPPEDASTPFAIPRTSSLARAKRPS 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 VSFAEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPT ::::::::::::. ::::.::::.::::::::::: :::.:::::::::.... :. :. gi|335 VSFAEGTKFAPQSRRSSGELSSPLRKPKRLSRGAQSGPEGREAEESTGPEEAEAPESFPA 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 ATSSGDPATSHGQLPPGSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVF :.: :: ::.: . : :.. ::: .:. .:..::::: :.::::::: :. :::: ::: gi|335 AASPGDSATGHRRPPLGGRTVAEHVEAIEGSVQESSGPVTTIYMLAGKPRGSEGPVRSVF 650 660 670 680 690 700 720 730 740 750 760 mKIAA0 RRLGNYQKDQMDPKVKSAIPKPLRRSLGRNQASAG-----------SAPGAVLSQAMEST :..:..:: : . ::: ::::: :..:.:...: : ::: : : : gi|335 RHFGSFQKGQAEAKVKRAIPKPPRQALNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPM 710 720 730 740 750 760 770 780 790 800 810 820 mKIAA0 AVRPEETPRGLGDGIESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPPQ ::::::. :::: : ::: .::: .: .: ::: ::::::..:::: ::::::.: ::. gi|335 AVRPEEAVRGLGAGTESSRRAQEPVSGCGSPEQDPQKQAEEERQEEPEYENVVPISRPPE 770 780 790 800 810 820 mKIAA0 H gi|335 P 830 >>gi|158257052|dbj|BAF84499.1| unnamed protein product [ (830 aa) initn: 3130 init1: 1671 opt: 4296 Z-score: 3787.0 bits: 711.7 E(): 3.1e-202 Smith-Waterman score: 4521; 71.291% identity (85.283% similar) in 829 aa overlap (12-826:1-829) 10 20 30 40 50 mKIAA0 IKPGPPTMLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPS-ELQCCPGWRQKD ::: :.. ::::::.::::: ::: ::::: .:::: ::::: :::::: gi|158 MGLGLLLPLLLLWTRGTQGSELDPKGQHVCVASSPSAELQCCAGWRQKD 10 20 30 40 60 70 80 90 100 110 mKIAA0 QECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRG ::::::::::::::.:.::::::::::::::::::.::::::::::: ::::.:::::.: gi|158 QECTIPICEGPDACQKDEVCVKPGLCRCKPGFFGAHCSSRCPGQYWGPDCRESCPCHPHG 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 QCEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPAS ::::::: :::: . :: :::::.:::::.::: ::.:::.::::: ::::::::: :. gi|158 QCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRRPCQCNTAA 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 -RCDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQ ::.::::.::: :::::::::: :::: ::: ::::::.: ::::::::...:.::::. gi|158 ARCEQATGACVCKPGWWGRRCSFRCNCHGSPCEQDSGRCACRPGWWGPECQQQCECVRGR 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 CSVTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWN ::..::.:.:::::.: :::::: : .:.:: .:::.:. : ::: ::.::::.:::: gi|158 CSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWN 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 GTQCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGK ::::.::: ::::: : :::.:: :: :. .:::::.::::::: :::.::: ::::. gi|158 GTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDTGHCQRCDPGWLGPRCEDPCPTGTFGE 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA0 GCSSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVS :.::::.:.::.::.:::.::::::::: :::.::::::::::::.::.:::::::::: gi|158 DCGSTCPTCVQGSCDTVTGDCVCSAGYWGPSCNASCPAGFHGNNCSVPCECPEGLCHPVS 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 GTCQLGRHGKN-ALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRPERNGAAFFRMKQQ :.:: : ... :::.: :::::::..:..::: :: . : : :::: :.::. ::: : gi|158 GSCQPGSGSRDTALIAGSLVPLLLLFLGLACCACCCWAPRSDLKDRPARDGATVSRMKLQ 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 VWGALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDS :::.::.:::.::: :::..:::::::::::::::::::::::::::::.::::::::.: gi|158 VWGTLTSLGSTLPCRSLSSHKLPWVTVSHHDPEVPFNHSFIEPPSAGWATDDSFSSDPES 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 GEEDEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPS :: ::. :: :::.: :::.:: : :::: .:.::::::::::: :::::::::::: : gi|158 GEADEVPAYCVPPQEGMVPVAQAGSSEASLAAGAFPPPEDASTPFAIPRTSSLARAKRLS 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 VSFAEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPT ::::::::::::. ::::.::::.::::::::::: :::.::::::::..... :. :. gi|158 VSFAEGTKFAPQSRRSSGELSSPLRKPKRLSRGAQSSPEGREAEESTGPDEAEAPESFPA 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 ATSSGDPATSHGQLPPGSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVF :.: :: ::.: . : ::. ::: .:. .:..::::: :.::::::: :. :::: ::: gi|158 AASPGDSATGHRRPPLGSRTVAEHVEAIEGSVQESSGPVTTIYMLAGKPRGSEGPVRSVF 650 660 670 680 690 700 720 730 740 750 760 mKIAA0 RRLGNYQKDQMDPKVKSAIPKPLRRSLGRNQASAG-----------SAPGAVLSQAMEST :..:..:: : . ::: ::::: :..:.:...: : ::: : : : gi|158 RHFGSFQKGQAEAKVKRAIPKPPRQALNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPM 710 720 730 740 750 760 770 780 790 800 810 820 mKIAA0 AVRPEETPRGLGDGIESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPPQ ::::::. :::: : ::: .::: .: .: ::: ::::::..:::: ::::::.: ::. gi|158 AVRPEEAVRGLGAGTESSRRAQEPVSGCGSPEQDPQKQAEEERQEEPEYENVVPISRPPE 770 780 790 800 810 820 mKIAA0 H gi|158 P 830 >>gi|73967353|ref|XP_853984.1| PREDICTED: similar to sca (829 aa) initn: 2348 init1: 2111 opt: 4241 Z-score: 3738.6 bits: 702.7 E(): 1.6e-199 Smith-Waterman score: 4420; 69.723% identity (84.560% similar) in 829 aa overlap (12-825:1-827) 10 20 30 40 50 mKIAA0 IKPGPPTMLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPS-ELQCCPGWRQKD :::.:. :::::::::::: ::: ::::: .:::: :::::::::::: gi|739 MGLRLL-PLLLLWTQGTQGSKLDPNGQHVCMASSPSAELQCCPGWRQKD 10 20 30 40 60 70 80 90 100 110 mKIAA0 QECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRG ::::::::::::::...::::::::::::::::::::.::::::::: :::: : :::.: gi|739 QECTIPICEGPDACQEDEVCVKPGLCRCKPGFFGAQCNSRCPGQYWGPDCREICACHPHG 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 QCEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPAS ::::::: :.:: . :: ::: :::::::.::: :: :.:.:::::::::::::::::. gi|739 QCEPATGVCHCQADRWGGRCEFACTCGPHGRCDPATGACRCEPGWWSPTCRRPCQCNPAA 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 -RCDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQ :::.. ..: : ::::::.::: : :: ::: :.::::.: :::::::: :.:: :. gi|739 ARCDHTDSSCRCEPGWWGRHCSFRCACHGSPCAQESGRCACRPGWWGPECRLPCECVCGR 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 CSVTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWN ::..::.:.::::..: :::::: : :: .:..:::::. . :: ::.::::.:::: gi|739 CSAASGQCACPPGYRGARCELPCRAGSYGPHCRDSCGHCKQKEPCSADTGSCESCEPGWN 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 GTQCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGK ::::.:::: ::::: : :::.:. :: :: .:::: .::::::: :::.:::.::::. gi|739 GTQCHQPCPPGTFGENCRQQCPHCQRGEACQPDTGHCWRCDPGWLGPRCEDPCPIGTFGE 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA0 GCSSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVS :::::::.:.::.::::::::::..:::: :::.:::.::.:::::.::.:::: :. :: gi|739 GCSSTCPTCVQGSCDAVTGECVCNTGYWGPSCNTSCPSGFYGNNCSIPCECPEGPCNSVS 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 GTCQLGRHGKNA-LIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRPERNGAAFFRMKQQ :::::: ::..: ::.::::::::::.::. :: :: ..:::::::: . ::. ::: : gi|739 GTCQLGPHGQDATLIAGILVPLLLLLLGIIFCACCCWAARLDPKDRPASDRAAMSRMKLQ 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 VWGALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDS :::::..:::::::::....:::::::::::::.::::::::::::::::::::::::.: gi|739 VWGALSSLGSALPCGSFGSHKLPWVTVSHHDPEIPFNHSFIEPPSAGWASDDSFSSDPES 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 GEEDEAHAYFVPPREEMVPMAQEESPEASLPGGSFPPPEDASTPFPIPRTSSLARAKRPS :: ::. :: .::.: :: .:. : :::::: : ::::::::::::::::::::::::: gi|739 GE-DESPAYCMPPQEGMVTVAHGEFPEASLPEGPVPPPEDASTPFPIPRTSSLARAKRPS 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 VSFAEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQVNTEEDAPT ::::::::::::. ::::..:::.:::::: :::: ::.:::::: : :... .: : gi|739 VSFAEGTKFAPQSRRSSGEISSPLRKPKRLPRGAQLGPESQEAEESMGSEKAEMDETLPG 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 ATSSGDPATSHGQLPP-GSQMVAECAETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSV :.: : ::.. .:: :. ::: .:. .:.. :.::::.:::::::::: :::: :: gi|739 AASPRDSATGRRRLPTLGGWTVAERVEAIEGSVLEGSGSVTTIYMLAGTPQLSEGPVRSV 650 660 670 680 690 700 720 730 740 750 760 mKIAA0 FRRLGNYQKDQMDPKVKSAIPKPLRRSLGRNQASAGSAPGAV-----------LSQAMES .::.:..:: : .:::::::::: ::.:.::..: : : :.. :.. .:: gi|739 LRRFGSFQKGQAEPKVKSAIPKPPRRALSRNKGSPGLASGSAIQSPSLAPNDELTRPLES 710 720 730 740 750 760 770 780 790 800 810 820 mKIAA0 TAVRPEETPRGLGDGIESSGTVQEPDAGGSSLEQDSQKQAEEKEQEEPLYENVVPMSVPP ... :::. :::::: .::: .:: :.: ::: :: :.:. :::: ::::.:.: :: gi|739 AGTGPEEVARGLGDGSKSSGRAQELAPEGGSQEQDPQKLADEEGQEEPQYENVAPISGPP 770 780 790 800 810 820 mKIAA0 QH gi|739 AP >>gi|220938230|emb|CAX15547.1| scavenger receptor class (478 aa) initn: 3738 init1: 3738 opt: 3746 Z-score: 3305.7 bits: 621.8 E(): 2e-175 Smith-Waterman score: 3746; 97.246% identity (97.458% similar) in 472 aa overlap (8-479:1-472) 10 20 30 40 50 60 mKIAA0 IKPGPPTMLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPSELQCCPGWRQKDQ ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 MLAAMGLELVFSLLLLWTQGTQGSTLDPAGQHVCKGSSPSELQCCPGWRQKDQ 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 ECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 ECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 CEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPASR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 CEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRRPCQCNPASR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 CDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 CDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 VTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 VTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGT 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 QCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGKGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 QCKQPCPAGTFGERCTGQCPRCRLGEPCQAETGHCQHCDPGWLGHRCENPCPLGTFGKGC 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVSGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 SSTCPACAQGTCDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGLCHPVSGT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 CQLGRHGKNALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRPERNGAAFFRMKQQVWG ::::::::::::::::::::::::::::::::::::::::::: : .: : gi|220 CQLGRHGKNALIVGILVPLLLLLMGIVCCAYCCSGTRLDPKDRDGPYGPRRVTRSQPSWR 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 ALTNLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEE gi|220 LLPSP 827 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 02:33:40 2009 done: Fri Mar 13 02:41:58 2009 Total Scan time: 1093.640 Total Display time: 0.370 Function used was FASTA [version 34.26.5 April 26, 2007]