Comparison of KIAA cDNA sequences between mouse and human (FLJ00234)
<<Original sequence data>>
mouse mFLJ00234 (msp01081) length: 1442 bp, CDS: 2 - 1417
human (sj06933) length: 4472 bp, CDS: 1 - 492
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 194 - 195 1 1 50.0
CDS: 196 - 492 94 115 55.0
3'UTR: 493 - 4423 638 606 48.7
amino acid
CDS: 196 - 492 12 87 87.9
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msp01081 1 .................................................. 1
sj06933 1 CTCTACTCACTGGCCATCTTCGTGGTGATCACTGTGCACTTTGGGGCCCA 50
L Y S L A I F V V I T V H F G A Q
51 ----+----*----+----*----+----*----+----*----+----* 100
msp01081 1 .................................................. 1
sj06933 51 GGACATCTTAACCCTTTATGAACTAAGCACACCCCTCTGCTGGGACTCCA 100
D I L T L Y E L S T P L C W D S K
101 ----+----*----+----*----+----*----+----*----+----* 150
msp01081 1 .................................................. 1
sj06933 101 AACTAATCGGCTATGGTTCTGCAGCTCAGCATCTCCCCTACCTCACCAGC 150
L I G Y G S A A Q H L P Y L T S
151 ----+----*----+----*----+----*----+----*----+----* 200
L V
msp01081 1 ...........................................AGCTGGT 7
| | |
sj06933 151 CTGCTGGCCCTGAAGCTCCTGCAGTACTGCCTGGCCGATGCCTGGGTAGC 200
L L A L K L L Q Y C L A D A W V A
201 ----+----*----+----*----+----*----+----*----+----* 250
P R C * P L R - L R M E G R V S S
msp01081 8 TCCGAGGTGCTAGCCCCTCCGTGT.TTGCGCATGGAGGGGCGCGTGAGCT 56
| || || | || || | || | |||| || |
sj06933 201 TGAGATCGGCCTGGCCTTCAACATCCTGGGGATGGTGGTCTTTGCCTTTG 250
E I G L A F N I L G M V V F A F A
251 ----+----*----+----*----+----*----+----*----+----* 300
V G S P H S F L N A P V L F R G
msp01081 57 CCGTGGGCTCGCCCCACAGTTTCCTCAACGCTCCCGTGCTTTTCCGCGGC 106
|| | |||| | || ||| |||| | | | | |
sj06933 251 CCACTATCACGCCTCTCATGTTCACAGGTGCTCTCTTTTCTGGTGTGGCC 300
T I T P L M F T G A L F S G V A
301 ----+----*----+----*----+----*----+----*----+----* 350
P V E P L V F L A N F A L V L Q G
msp01081 107 CCCGTGGAGCCCCTAGTCTTCCTGGCCAACTTTGCCCTGGTTCTGCAGGG 156
||| | ||| | | | ||| | || | | | |
sj06933 301 TGTGTGAATAGCCTGGCCATGCTGACGGCCTCCGGCATCTTCAACTCACT 350
C V N S L A M L T A S G I F N S L
351 ----+----*----+----*----+----*----+----*----+----* 400
P L T T Q Y L W H R - Q H G A
msp01081 157 ACCGCTCACCACACAGTACCTTTGGCACCGGTT.......CAGCACGGAG 199
| |||| | | || || | | |||| | | ||||
sj06933 351 CTACCCAGCCACTCTGAACTTTATGAAGGGGTTCCCCTTCCTCCTGGGAG 400
Y P A T L N F M K G F P F L L G A
401 ----+----*----+----*----+----*----+----*----+----* 450
R L -
msp01081 200 CTCGGCTAC......................................... 208
|| | || |
sj06933 401 CTGGCCTCCTGCTCATCCCGGCTGTTCTGATTGGGATGCTGGAAAAGGCT 450
G L L L I P A V L I G M L E K A
451 ----+----*----+----*----+----*----+----*----+----* 500
msp01081 209 .................................................. 209
sj06933 451 GATCCTCACCTCGAGTTCCAGCAGTTTCCCCAGAGCCCCTGATCTGCCTG 500
D P H L E F Q Q F P Q S P *
501 ----+----*----+----*----+----*----+----*----+----* 550
msp01081 209 .....AATGGCACCCGCCACCGGGAGAACTGTGGGAACCAAAGCGCGGAT 253
| | || | || |||| | ||| ||||| | |
sj06933 501 GACCAGAAGACAGAGGGCAAGAGGAGCAAAGTGAACACCAAGCAACTGGA 550
551 ----+----*----+----*----+----*----+----*----+----* 600
msp01081 254 CCCCTCATGAAGGAAGTGGAGACCCTGACATCTCACTGGACCCTCTAC.. 301
|| | ||||| || || || || || || |
sj06933 551 GGTCTGCAGCTGGAAGCCCAGCCCACAGCAGGACAAGCAACTCTTGTCTA 600
601 ----+----*----+----*----+----*----+----*----+----* 650
msp01081 302 .................................................. 302
sj06933 601 AGGGCAGTGCTCTCTTTGGACGAGGTAGTCAAGAGAGACCAAGGCACCAC 650
651 ----+----*----+----*----+----*----+----*----+----* 700
msp01081 302 .................................................. 302
sj06933 651 CCCATCCACAGCTGACCCAGCCTCTGTCTAGGATCTAGAATCATAACCCA 700
701 ----+----*----+----*----+----*----+----*----+----* 750
msp01081 302 .................................................. 302
sj06933 701 CACAGGCCCACTGCAGGACAGGTGGCAGAGGAGCTATTTGGGACAGGAGT 750
751 ----+----*----+----*----+----*----+----*----+----* 800
msp01081 302 .................................................. 302
sj06933 751 CAGTTCTCCCTTTCTGCTATCCATCACTTATAACCCCACAGGCCAGAGGA 800
801 ----+----*----+----*----+----*----+----*----+----* 850
msp01081 302 .................................................. 302
sj06933 801 GAGGTCCTGAGAGAGGTGACACTTCAGGGACCAGAGGCAGCACGAGGGCT 850
851 ----+----*----+----*----+----*----+----*----+----* 900
msp01081 302 .................................................. 302
sj06933 851 GGCATCTCTCCTTCCAGCCCAAACTGCACAGCCCCAACCAGGTTCCCAAC 900
901 ----+----*----+----*----+----*----+----*----+----* 950
msp01081 302 ...............................ATGAACGTGGGA....... 313
||||| |||| |
sj06933 901 ACGTGTAGCAGTCATCAGCCATTCCTTAACAATGAATGTGGTACCTGGTT 950
951 ----+----*----+----*----+----*----+----*----+----* 1000
msp01081 314 .................................................. 314
sj06933 951 AGTGCCAGCCTTGGGAAGGAGGGAGGGAGGTAAGAGGGGCTTGGTGATCT 1000
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msp01081 314 .................................................. 314
sj06933 1001 CTGGAGGAAGAGTGTTGCCTTTGCTGTGGTTGGGGAATCGATCCTTGGCT 1050
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msp01081 314 .................................................. 314
sj06933 1051 ATGGCCTACCCACTCCCCTGGCTGAAGAGTGCCAATCATTACAAATCAGC 1100
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msp01081 314 .................................................. 314
sj06933 1101 TTCAGCAAACTGAAACAAACCTTCTGGTGCCTTGGGCTTTGGGGCCCTCT 1150
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msp01081 314 GGCTTCCTGGTGGGACTCTTCTGGTCCACCCT.................. 345
| |||||| | | ||| | | | | |
sj06933 1151 GTTTTCCTGCTCCCAGTCTGCCTGCCATACGTTAGACAACAGAAGCTGCT 1200
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msp01081 346 ......GCTGGGAGCCTGGAGTGACCGCGTGGGTCGCCGCCCATTG.... 385
| |||||| ||| || |||| | | || | ||
sj06933 1201 GGGCTGGGCAGGAGCCCTGAGCTGCCTGGTGGATTGGTACCAAGTGGGGC 1250
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msp01081 386 .................................................. 386
sj06933 1251 CAGCCAGGGCTTCTACTGACTCGCTGTGCAACCTTGAGCAAGCCCCACTA 1300
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msp01081 386 .................................................. 386
sj06933 1301 GGAACGGCTAGATCAGCAATGCCCCAAATTGTTGAATCGTGGTGATCACA 1350
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msp01081 386 .................................................. 386
sj06933 1351 TTTGGATGGACAAGTTAGGAAACTTAGCTGATTCTCTGAGATACTTCCCA 1400
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msp01081 386 .................................................. 386
sj06933 1401 CTTCCTCATACATTCTACAGTGAGATGCCTCTCTTCATGGGCCTGGGGAA 1450
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msp01081 386 ...........CTGGTGCTGGCCTCT........................ 400
|| ||||| || |
sj06933 1451 AGGATGAATGAGTGTGGCTGGACTTTTGACCTTTAATGTCCCTGAGCAGT 1500
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msp01081 401 .................................................. 401
sj06933 1501 TCTTGGCCCTTGGGGAGAAGTAGGGGGAGGATCTGGCTGACTCAGCCCCA 1550
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msp01081 401 .................................................. 401
sj06933 1551 ACCGAGGGGTAGCAGCTGCAGCCCAGCCAAGCAGAACACCCTGGCCCTAC 1600
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msp01081 401 .................................................. 401
sj06933 1601 AGACCTGTGTCTGAGCAGGCTTTGGAGGAAAGGCCACTTCTGAGTCCTCT 1650
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msp01081 401 ..........................CTTGGTCTGCTGCTCCAGGCCGTG 424
|||| ||| || || || |||
sj06933 1651 GTCTCGGGAGAAGCCAGGCCTAGGTGCTTGACCTGGTGATCTGAGCTGTG 1700
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msp01081 425 .GTGTCCATCTTTGTGGTGCAGCTAGAACTGCACGTCGGGTTCTTCGTGC 473
||||| | || | |||| | ||| ||| | ||| ||
sj06933 1701 TTTGTCCTAGTATGGGTGGCAGTCACCTCTGAACGCACTGGCCTT..GGC 1748
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msp01081 474 TTGGCCGAGCTCTTTGTGCCCTTCTGGGAGACTTCAACGGCCTCCTTGCT 523
|| | ||| | || |||| | | || || ||||
sj06933 1749 TTAGAGGAGGCTTGTG...ACTTCAGCTGTTCCAGCTGGGGCTGGATGCT 1795
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msp01081 524 GCTAGCTTTGCCTCTGTGGCAGATGTTAGCTCTAACCACAGTC....... 566
| || | || | ||| || || | |||
sj06933 1796 GGACTCTGATTCCCTCAGAGAGACAGAAGATCGGGCAGAGGTCAACCAGA 1845
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msp01081 567 .................................................. 567
sj06933 1846 AGGCCACACAGGGCAGTGGACAACAGTGGAGGGTATACCAAATAGAAATA 1895
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msp01081 567 .................................................. 567
sj06933 1896 AAATGCAGGAAACCTCTCTGAATACTGCCCTTGGGGACCTCAGGAGGGAG 1945
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msp01081 567 .................................................. 567
sj06933 1946 TGGGACTGATTGGAGACAAAGAGCCAGAAATCATCCCCTGGAGATACTCA 1995
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msp01081 567 ..................................GCACCTTCCGGATGGC 582
||| ||| | ||
sj06933 1996 GACACTGTATTGTTATTGGCGCTGTCCTGTGAGGGCAGTGTCCAGGCTGC 2045
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msp01081 583 TCTGCTGGAAGCATGCAT................................ 600
||||| | || |||
sj06933 2046 CCTGCTTGTCATATCCATGCCCTGGCTCTGGCCCCGGTGAGCACTTGTGC 2095
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msp01081 601 ...............TGGTGTGGCCGGGACCCTGGCAAGCCTTCTCGGGG 635
| | || ||| | ||| | || ||
sj06933 2096 TGCATGAGGAAAGGAGGATCAGGTGGGGTCAAAACCAAAGCATCGAGGCT 2145
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msp01081 636 GTCACTGGC......................................... 644
| |||||||
sj06933 2146 GGCACTGGCCAAGACAGACTCTGGCAGGGAGGGGAGTGGAAGGAAGGAGC 2195
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msp01081 645 .................................................. 645
sj06933 2196 CCCAAACCTGGAGTGAGACCTTTGACTTTCTGATGATGTGGCCAAGAACT 2245
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msp01081 645 .................................................. 645
sj06933 2246 AGGAGTCACCTGGCCAGCACAGCCAAGAGTGGGGCTGGGGGCGCAGCCAG 2295
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msp01081 645 .................................................. 645
sj06933 2296 CTTTAAGGTGTCAACACCTGGCCCTTGCGGGGAAAGAGCCTTCAGCAGCC 2345
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msp01081 645 .................................................. 645
sj06933 2346 CCCACGGCCTGGAGCCTGGGTTTATTGGAGGGTGCTTTCTTACCCTCTGA 2395
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msp01081 645 ............TCCGGGCCCAGGGTTATGCCAACCCCTTCTGGCTGGCT 682
|||| ||| ||| || | | | |||| ||
sj06933 2396 ACCCAGTGGAGGAGGGGGCAATGGGATATTCCTGCTCTGTATGGC...CT 2442
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msp01081 683 TTGGCCCTGCTGATTGT..CATGGCTCTATACGCAGCATTTTGTTTTGGT 730
||| | ||| |||| || |||| | | || | | || |
sj06933 2443 CTGGGTCAGCTTTTTGTTGCAAAATCCTATCCCCCGCTGCTAGATTCTTT 2492
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msp01081 731 GAGACGGTGAAGGAGCCAAAGTCCACCAGGCTTTTCACGCTCCGCCATCA 780
|| | | || ||| | || ||| | | | ||| | |
sj06933 2493 GAAGCAAGGGAGAAGCAATAGCCCAGCCTCAGAATGATTCTCAGGAA... 2539
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msp01081 781 TCGATCCATTGCCCGGCTATATGTGGTTCCAGCCCCAGAAAAGTCCAGGA 830
| | ||| | | || | |||| | |||| | |
sj06933 2540 ...AGCAATTCCACTGCCA...GTGGACTGGGTGCCAGGAGGCCTAGGTC 2583
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msp01081 831 TGCATCTAGCCCTGTACTCTTTGGCCATATTCGTGGTGGTTACTGTGCAT 880
|| |||| | ||| || | | || | || | |
sj06933 2584 TGGATCTGGGGCTGCCACTAATGACAGGAAAGTGGGCTTATCCTCAACCT 2633
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msp01081 881 TT.TGGGGCTCA...................................... 891
|| || | ||||
sj06933 2634 TTCTGAGCCTCAGTGTCATTATCTGTAAAATGGGGATGATAATACCAGGT 2683
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msp01081 892 .................................................. 892
sj06933 2684 AGAGTTGCTCTGATGACTGGAGACCATGGAGCGGAGTGTTTGGGAAATGG 2733
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msp01081 892 .................................................. 892
sj06933 2734 CAAAGATTTGTGAGGGCTTCGTGCTTTAGAGATTTGCTACCCTTAACCAC 2783
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msp01081 892 .......AGATATCCTGACACTCTATGAGCTGAGCGCACCCCTCTGC... 931
|| | |||| | ||| | || || | ||| ||
sj06933 2784 CAGCATCAGCTCACCTGGGAATCTGTAAGAAATGCAGAGTCCTAGGCCCC 2833
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msp01081 932 .................................................. 932
sj06933 2834 ACCCCAGATCTCCTGATTTTAACAACATTCCCAGGTGACTTGGATGCATG 2883
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msp01081 932 .................................................. 932
sj06933 2884 TTAAAGTTGGAGAAGCTGCCCTAAGTGACAACCCTTTGCCTTTTCAGGAC 2933
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msp01081 932 .................................................. 932
sj06933 2934 TTTGCCTCTTTCCACAGAGCTGCAGGTTCTGTCTAGGCTGCTTTTACTGC 2983
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msp01081 932 .................................................. 932
sj06933 2984 CATGGGGGCTGCCTGGTCCCTGAGTAAGCAGTGGGTAGCCCTGGATGGCT 3033
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msp01081 932 .................................................. 932
sj06933 3034 GAGGGGCTGGGGAAGCCAGCTGGGCCAGACCAGGAAGGAGCCTGAGGCAC 3083
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msp01081 932 ..............TGGGACTCCAAGCTGATTGGCTATGGCTCAGCAGCC 967
|| | ||| ||| | ||| || |
sj06933 3084 AGCACCAAGGCATGGGGTAGGGTGGGCTTTGAGGCACGGCCTCCCCATGC 3133
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msp01081 968 CAGCACCTACCCTACCTCACCAGCCTGCTGGGCCTAAG..GCTTCTGCAA 1015
| ||| | | || || || ||| || || | | ||||
sj06933 3134 CCAGACCCAGGCCCAAACAGGAGGCTCCTGTGCACCAGCAAGTGCAGCAA 3183
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msp01081 1016 TTCTGCCTGGCTGACACCTGGGTGGCTGAGATTGGCCTGGCTTTCAACAT 1065
||| || || | || || | | ||| || |||| || | ||
sj06933 3184 AGCTGGCT.GCAGTGACAAGGAAGTCAGAGGGAGGGCTGGTTTGCCTCAA 3232
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msp01081 1066 CC................................................ 1067
||
sj06933 3233 CCCTCGCCCTGGATGTGGCAAAAGATACCACACCGAAGGAAGCTGTAGGG 3282
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msp01081 1068 .................................................. 1068
sj06933 3283 GATCTGGGACTTAGTCAGGCTAGCTAAGGGCACTGAGTGATTACAGGGCA 3332
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msp01081 1068 .................................................. 1068
sj06933 3333 AGGCCACAGAGCGGCAGGAAGTTGTAAGTGCAGGGGCCAGGCACAGTCTG 3382
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msp01081 1068 ...............................TGGGAATGGTGGTCTTTGC 1086
|| || | ||
sj06933 3383 AGTGGAGAGCCATGATGGCACTCATCCCTGGCTGGCTCCTGGGCCCAGGC 3432
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msp01081 1087 GTTTGCTACCATTACACCCCTCATGTTCACAGGGTACGGATTGCTCTTCC 1136
||||| | |||| | || | | | || ||||
sj06933 3433 CCTTGCTCAGAATACAGTGCCCAGGCCCGCCTGGGCATTGCCTTAATTCC 3482
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msp01081 1137 TGTCATTGGTCACGACGCCTGTCATCCGGGCCAAGCT............. 1173
|||| || | | | ||||||| ||||||
sj06933 3483 TGTC..TGAGGCTGCCTTCCGTCATCCTCCTCAAGCTGACTGCTATCAGC 3530
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msp01081 1174 .................................................. 1174
sj06933 3531 AGGAGAAGGGAATGCAGAACCACACCCACCCCAACTCCAGTGTCTCCAGA 3580
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msp01081 1174 .................................................. 1174
sj06933 3581 ACTGAGCAGGGACCCTCCCCATGACGGAGACAGACAACCCAATGGCAGGG 3630
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msp01081 1174 .................................................. 1174
sj06933 3631 CCTGGGGGAGTTCTAACCTCCCGTGCCCAAGCCTGACTTCCCTTCCCTCT 3680
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msp01081 1174 .................................................. 1174
sj06933 3681 CCAGATACTGAGGAAAGTGGGTTGGAGGTGGGCCATGAGGGTGGGGGACA 3730
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msp01081 1174 .................................................. 1174
sj06933 3731 GGGGGAGGGAGAGCCATTTCCTAAGAAGAGCCCAGGTTGTCTCAGCCCAG 3780
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msp01081 1174 .................................................. 1174
sj06933 3781 GGAGACTGGTTTCAGGAGCTGTTCCTTCAGAAAGGACGATGGAAATGGAA 3830
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msp01081 1174 .................................................. 1174
sj06933 3831 GTCACAGCAGGGCTGGGGAACTGGGGACTGGTTAGGTTGGACCCATGGGT 3880
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msp01081 1174 ........TTCCAAGCTGGTGAGCGAGTC..................... 1194
||||| |||||| ||| |
sj06933 3881 GCAGCACCCTCCAAACTGGTGTCAGAGCCTGCAGATGAGTCCCGGGAGGA 3930
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msp01081 1195 ...........GGAGCAGGGTGCTCTGTTCTCTGCTG............. 1220
||| || || ||| || || ||
sj06933 3931 GCGGCCCTGCAGGAAGCGGATGATCTTCTCAATGGTGGCCTCCTGGTATT 3980
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msp01081 1221 ...............TGGCCTGTGTGAATAGCTTGGCCATGTTGATGGCC 1255
||| | | | | | || | ||| |
sj06933 3981 CGTGGGACCACCTGTGGGCACAGGAGCCAATGTGGTTCAGACAGCTGGGC 4030
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msp01081 1256 TCCGGCATCTTCAACTC.CATCTACCCGGCCACTCTGAACTTCATGAAGG 1304
|| | || | | || | | | ||||||| ||||| |
sj06933 4031 AGAGGGAGCTGCTAGTCAGCTGTTTGCCCACACTCTGCCTGTCATGGTGA 4080
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msp01081 1305 GCT.TCCCCTTCCTCCTGGGAGCTGGCCTCC................... 1334
| | |||| || || || | | ||
sj06933 4081 TTTGTACCCTACCCCCCTGGTCCCAGGGCCCTGGGGCTCACTTGATACCG 4130
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msp01081 1335 ........................TCTTCATTCCAGCCATTCTGATTGGG 1360
|| ||| | | | | | | ||
sj06933 4131 TTGAAAGTAAGCACAGCCTGCATGTCCTCAGGCAGGACCTGGGGCTCAGG 4180
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msp01081 1361 GTACTGGAAAAGGTTAA................................. 1377
||| ||| | ||
sj06933 4181 CCACTCGAAGCCATCAATGATGGGCACAATGTTCTTGCCGCAGCTTAAAG 4230
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msp01081 1378 .................................................. 1378
sj06933 4231 CAGTCACAATCTCCTGGAGAAAGAAAGGAAAGGAGGAAGATACCCCTGTA 4280
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msp01081 1378 ......TCCACACCCGGAGTTCCAGCAGTTTCCTCAGAGCCCC....... 1414
| |||| |||| | || ||| |||
sj06933 4281 CCCATTTAGGGACCCTTGTAGCCAGGCAGGTGCTGGGAGGCCCACTGGCC 4330
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msp01081 1415 .............................................TGATC 1419
||
sj06933 4331 CGAGGCTGGGCCCAGGGCAGGACACCAGTCCTGATGTCCACCTTGATGTC 4380
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msp01081 1420 TGCCCGAAGCCATGAGGAGCAAT........................... 1442
| || || || || | | |||
sj06933 4381 TACCTTAACCCTTGTAGTGTAATAAAAAATAAATATTTTTCCTTTGCCCA 4430
4451 ----+----*----+----*----+----*----+----*-- 4492
msp01081 1443 .......................................... 1443
sj06933 4431 GAGTTCCTAGCACAGAGCTGCTAAAACCCTTGGAATCTCTTG 4472