# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msp01054.fasta.nr -Q ../query/mFLJ00190.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00190, 527 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7917403 sequences Expectation_n fit: rho(ln(x))= 5.7137+/-0.000188; mu= 9.7298+/- 0.011 mean_var=88.3860+/-16.883, 0's: 37 Z-trim: 41 B-trim: 0 in 0/67 Lambda= 0.136421 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|55976520|sp|Q8CGK5.1|I28RA_MOUSE RecName: Full= ( 535) 3631 724.6 1.7e-206 gi|37046715|gb|AAH57856.1| Interleukin 28 receptor ( 535) 3609 720.3 3.4e-205 gi|109475659|ref|XP_342947.2| PREDICTED: similar t ( 530) 2749 551.0 3e-154 gi|55976528|sp|Q8IU57.1|I28RA_HUMAN RecName: Full= ( 520) 1944 392.6 1.5e-106 gi|47077653|dbj|BAD18707.1| FLJ00190 protein [Homo ( 521) 1944 392.6 1.5e-106 gi|73950610|ref|XP_855110.1| PREDICTED: similar to ( 540) 1832 370.5 6.5e-100 gi|108999239|ref|XP_001105189.1| PREDICTED: simila ( 526) 1734 351.2 4.1e-94 gi|119888805|ref|XP_874034.2| PREDICTED: similar t ( 524) 1699 344.3 4.8e-92 gi|119615519|gb|EAW95113.1| interleukin 28 recepto ( 437) 1586 322.0 2.1e-85 gi|148698024|gb|EDL29971.1| interleukin 28 recepto ( 254) 1494 303.8 3.8e-80 gi|75516482|gb|AAI01976.1| IL28RA protein [Homo sa ( 322) 1395 284.4 3.4e-74 gi|144853663|gb|AAI39723.1| IL28RA protein [Homo s ( 322) 1395 284.4 3.4e-74 gi|149024266|gb|EDL80763.1| similar to class II cy ( 230) 1223 250.4 4e-64 gi|114554681|ref|XP_513203.2| PREDICTED: interleuk ( 492) 1198 245.7 2.2e-62 gi|25527129|gb|AAN28267.1| interleukin 28 receptor ( 491) 1195 245.1 3.3e-62 gi|73487338|gb|AAI01409.1| IL28RA protein [Homo sa ( 283) 1123 230.8 4e-58 gi|26986040|emb|CAD58830.1| soluble isoform of Lik ( 244) 1024 211.2 2.6e-52 gi|194207897|ref|XP_001917953.1| PREDICTED: simila ( 489) 1021 210.9 6.8e-52 gi|108999242|ref|XP_001105109.1| PREDICTED: simila ( 497) 967 200.3 1.1e-48 gi|119615522|gb|EAW95116.1| interleukin 28 recepto ( 184) 822 171.4 1.9e-40 gi|55665893|emb|CAH70117.1| interleukin 28 recepto ( 185) 822 171.4 2e-40 gi|25527136|gb|AAN28268.1| interleukin 28 receptor ( 211) 783 163.8 4.4e-38 gi|126328589|ref|XP_001365104.1| PREDICTED: simila ( 266) 687 144.9 2.6e-32 gi|149024267|gb|EDL80764.1| similar to class II cy ( 204) 596 127.0 5.2e-27 gi|50759912|ref|XP_417841.1| PREDICTED: similar to ( 246) 497 107.5 4.4e-21 gi|149634890|ref|XP_001509052.1| PREDICTED: simila (1058) 489 106.4 4.1e-20 gi|28564475|emb|CAD68051.1| class II helical cytok ( 435) 245 58.1 5.8e-06 gi|209734216|gb|ACI67977.1| Interleukin-20 recepto ( 269) 232 55.4 2.4e-05 gi|92098250|gb|AAI15201.1| Cytokine receptor famil ( 578) 233 55.8 3.7e-05 gi|68534769|gb|AAH98871.1| Crfb12 protein [Danio r ( 579) 233 55.8 3.7e-05 gi|74223983|dbj|BAE23866.1| unnamed protein produc ( 230) 215 52.0 0.00021 gi|74193109|dbj|BAE20584.1| unnamed protein produc ( 230) 214 51.8 0.00024 gi|61213139|sp|Q7TNI4.1|I22R2_RAT RecName: Full=In ( 229) 213 51.6 0.00028 gi|33386571|emb|CAD88474.1| putative cytokine rece ( 230) 212 51.4 0.00032 gi|115528962|gb|AAI24999.1| Interleukin 22 recepto ( 230) 212 51.4 0.00032 gi|148671504|gb|EDL03451.1| interleukin 22 recepto ( 234) 212 51.4 0.00032 gi|61213699|sp|Q80XF5.1|I22R2_MOUSE RecName: Full= ( 230) 211 51.2 0.00037 gi|117558495|gb|AAI26873.1| Interleukin 22 recepto ( 232) 211 51.2 0.00037 gi|118088508|ref|XP_001233762.1| PREDICTED: simila ( 244) 204 49.9 0.001 gi|126325469|ref|XP_001377215.1| PREDICTED: simila ( 412) 206 50.4 0.0011 gi|15212826|gb|AAK85714.1| interleukin 22-binding ( 231) 202 49.4 0.0013 gi|114609477|ref|XP_527512.2| PREDICTED: interleuk ( 231) 202 49.4 0.0013 gi|109072731|ref|XP_001099782.1| PREDICTED: simila ( 286) 201 49.3 0.0017 gi|194669943|ref|XP_612334.4| PREDICTED: similar t ( 230) 197 48.5 0.0025 gi|120538193|gb|AAI29397.1| Crfb8 protein [Danio r ( 272) 196 48.3 0.0032 gi|149059839|gb|EDM10722.1| interferon (alpha and ( 377) 197 48.6 0.0036 gi|156120301|emb|CAJ29460.2| class II cytokine rec ( 492) 196 48.5 0.0051 gi|149059838|gb|EDM10721.1| interferon (alpha and ( 593) 197 48.8 0.0052 gi|74001404|ref|XP_852266.1| PREDICTED: similar to ( 569) 194 48.2 0.0076 >>gi|55976520|sp|Q8CGK5.1|I28RA_MOUSE RecName: Full=Inte (535 aa) initn: 3631 init1: 3631 opt: 3631 Z-score: 3863.7 bits: 724.6 E(): 1.7e-206 Smith-Waterman score: 3631; 100.000% identity (100.000% similar) in 527 aa overlap (1-527:9-535) 10 20 30 40 50 mFLJ00 PLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 MWRADRWAPLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQ 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 SYIKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEYLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SYIKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEYLF 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 DVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLFPDTPYGQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 DVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLFPDTPYGQP 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 VQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLAMPSLLLLLIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 VQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLAMPSLLLLLIA 190 200 210 220 230 240 240 250 260 270 280 290 mFLJ00 AVAAGVAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILCPQKELTIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 AVAAGVAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILCPQKELTIR 250 260 270 280 290 300 300 310 320 330 340 350 mFLJ00 NRPAPQVRNPATLQAGPERDSTEDEDEDTDYDDDGDSVQPYLERPLFISEKPRVMEHSET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 NRPAPQVRNPATLQAGPERDSTEDEDEDTDYDDDGDSVQPYLERPLFISEKPRVMEHSET 310 320 330 340 350 360 360 370 380 390 400 410 mFLJ00 DESGVDSGGPWTSPVGSDGSSAWDSSDRSWSSTGDSSYKDEVGSSSCLDRKEPDQAPCGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 DESGVDSGGPWTSPVGSDGSSAWDSSDRSWSSTGDSSYKDEVGSSSCLDRKEPDQAPCGD 370 380 390 400 410 420 420 430 440 450 460 470 mFLJ00 WLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPPVSLQTLTFCWVNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 WLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPPVSLQTLTFCWVNN 430 440 450 460 470 480 480 490 500 510 520 mFLJ00 PEGEEEQEDEEEEEEEEEEEDWESEPKGSNAGCWGTSSVQRTEVRGRMLGDYLVR ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 PEGEEEQEDEEEEEEEEEEEDWESEPKGSNAGCWGTSSVQRTEVRGRMLGDYLVR 490 500 510 520 530 >>gi|37046715|gb|AAH57856.1| Interleukin 28 receptor alp (535 aa) initn: 3609 init1: 3609 opt: 3609 Z-score: 3840.3 bits: 720.3 E(): 3.4e-205 Smith-Waterman score: 3609; 99.431% identity (99.810% similar) in 527 aa overlap (1-527:9-535) 10 20 30 40 50 mFLJ00 PLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|370 MWRADRWAPLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQ 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 SYIKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEYLF ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|370 SYIKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAQGRSPRVESRYLEYLF 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 DVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLFPDTPYGQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|370 DVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLFPDTPYGQP 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 VQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLAMPSLLLLLIA ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|370 VQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLALPSLLLLLIA 190 200 210 220 230 240 240 250 260 270 280 290 mFLJ00 AVAAGVAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILCPQKELTIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|370 AVAAGVAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILCPQKELTIR 250 260 270 280 290 300 300 310 320 330 340 350 mFLJ00 NRPAPQVRNPATLQAGPERDSTEDEDEDTDYDDDGDSVQPYLERPLFISEKPRVMEHSET :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|370 NRPAPQVRNPATLQAGPERDSTEDEDGDTDYDDDGDSVQPYLERPLFISEKPRVMEHSET 310 320 330 340 350 360 360 370 380 390 400 410 mFLJ00 DESGVDSGGPWTSPVGSDGSSAWDSSDRSWSSTGDSSYKDEVGSSSCLDRKEPDQAPCGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|370 DESGVDSGGPWTSPVGSDGSSAWDSSDRSWSSTGDSSYKDEVGSSSCLDRKEPDQAPCGD 370 380 390 400 410 420 420 430 440 450 460 470 mFLJ00 WLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPPVSLQTLTFCWVNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|370 WLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPPVSLQTLTFCWVNN 430 440 450 460 470 480 480 490 500 510 520 mFLJ00 PEGEEEQEDEEEEEEEEEEEDWESEPKGSNAGCWGTSSVQRTEVRGRMLGDYLVR ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|370 PEGEEEQEDEEEEEEEEEEEDWESEPKGSNAGCWGTSSVQRTEVRGRMLGDYLVR 490 500 510 520 530 >>gi|109475659|ref|XP_342947.2| PREDICTED: similar to In (530 aa) initn: 1985 init1: 1234 opt: 2749 Z-score: 2925.6 bits: 551.0 E(): 3e-154 Smith-Waterman score: 2804; 79.887% identity (87.970% similar) in 532 aa overlap (1-527:9-530) 10 20 30 40 50 mFLJ00 PLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQ ::::::.:::::::::::::::::.::::::::::::::::::::::::::. gi|109 MWRAGRWAPLLLFLMQSALGRPRLAPPRNVTLLSQNFTVYLTWLPGLGSPPNVTYFVTYK 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 SYIKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEYLF :: .. :: :::::::..::::.::::: .:: :::::::::::: .:: ::::::::.: gi|109 SY-NNHWRRVEHCAGISTLVCPMMCLKKQDLYIKFKGRVQAASAHVKSPWVESRYLEYIF 70 80 90 100 110 120 130 140 150 160 170 mFLJ00 DVELAPPTLVLTQMEKILRVNATYQLPPCMP-SLELKYQVEFWKEGLGSKTLFPDTPYGQ :::::::::::.: :::: :::::::::::: ::::::::::::: : :::::::::::: gi|109 DVELAPPTLVLSQKEKILNVNATYQLPPCMPRSLELKYQVEFWKEDLRSKTLFPDTPYGQ 120 130 140 150 160 170 180 190 200 210 220 230 mFLJ00 PVQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLAMPSLLLLLI ::.::::: : :::.:::::::: ::: ::::::::: ::: .:::::.: :::::: gi|109 PVKIPLQQDARGRHCFSARTVYTLTHTKYSLFSEPSCIFLAAPGANRAVLAVPLLLLLLI 180 190 200 210 220 230 240 250 260 270 280 290 mFLJ00 AAVAAGVAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILCPQKELTI ::.:::.::: : :::::: :: :.:::::: :.::::::::::::: :::::::::::: gi|109 AAAAAGTAWKKMDGNPWFQWVKMPQALDFSENRHPVATFQPSGPEFSGDLILCPQKELTI 240 250 260 270 280 290 300 310 320 330 340 350 mFLJ00 RNRPAPQVRNPATLQAGPERDSTEDEDEDTDYDDDGDSVQPYLERPLFISEKPRVMEHSE :.::.:.::.::::::: :.::::::::::: :::::.:::::::::. :: .: :::: gi|109 RTRPVPRVRGPATLQAGSEKDSTEDEDEDTD--DDGDSIQPYLERPLFVREKLQVTEHSE 300 310 320 330 340 350 360 370 380 390 400 mFLJ00 TDESGVDSGGPWTSPVGSDGSSAWDSSDRSWSSTG----DSSYKDEVGSSSCLDRKEPDQ .::::::: :::.:::::::: :::::: :::::::.:::::::.:.::: gi|109 ADESGVDS-------VGSEGSSAWDSSGGSWSSTGVSSGDSSYKDEAGSSSCLDQKKPDQ 360 370 380 390 400 410 410 420 430 440 450 460 mFLJ00 APCGDWLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPPVSLQTLTF : :: : ::::::::::::::: ::: :::::: :.:: :::::::::::::::::: gi|109 EPHGDGHQGPLPCLEFSEDLGTVEELLKDDLSGWRIWGTLSPKRDLAPVEPPVSLQTLTF 420 430 440 450 460 470 470 480 490 500 510 520 mFLJ00 CWVNNPEGEEEQEDEEEEEEEEEEEDWESEPKGSNAGCWGTSSVQRTEVRGRMLGDYLVR :: .::: :::.:.:::::::::::::::. : ::..:: .:: :::.::: :::::.:: gi|109 CWDSNPEEEEEEEEEEEEEEEEEEEDWESDLKDSNTSCWDASSPQRTDVRGGMLGDYMVR 480 490 500 510 520 530 >>gi|55976528|sp|Q8IU57.1|I28RA_HUMAN RecName: Full=Inte (520 aa) initn: 1862 init1: 1152 opt: 1944 Z-score: 2069.4 bits: 392.6 E(): 1.5e-106 Smith-Waterman score: 2023; 59.735% identity (78.450% similar) in 529 aa overlap (1-527:9-520) 10 20 30 40 50 mFLJ00 PLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQ :::: :::.: ::::::::.::::.::::.::::::::::.: .:::::.:: gi|559 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQ 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 SY-IKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEYL : . :: ::.::: : :.: .::::: .::.::::::...: ..:: :::.::.:: gi|559 SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYL 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 FDVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLFPDTPYGQ :.:: :::.::::: :.:: .::::::::::: :.:::.: ::::: :.::::: ::.:: gi|559 FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 PVQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLAMPSLLLLLI :::: :: .::..:::::::.::. :::.::.:.:..::.: . : :..::::.::. gi|559 PVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILLL 190 200 210 220 230 240 240 250 260 270 280 290 mFLJ00 AAVAAGVAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILCPQKELTI . .:.:: :: . :::::: .: ::::::: . .:::::::: :: .::.:::::::: gi|559 VIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELTR 250 260 270 280 290 300 300 310 320 330 340 350 mFLJ00 RNRPAPQVRNPATLQAGPERDSTEDEDEDTDYD-DDGDSVQPYLERPLFISEKPRVMEHS ::.:.:: ::: :. ..: .:::.:. . : .:: : :::.: : :.... .. :: gi|559 GVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQEHQAPGHS 310 320 330 340 350 360 360 370 380 390 400 410 mFLJ00 ETDESGVDSGGPWTSPVGSDGSSAWDSSDRSWSSTGDSSYKDEVGSSSCLDRKEPDQAPC :. .::::: : . : :.::::::::::::.:: :::. :..:::. : .: : :.: gi|559 EA--GGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSW-DRAGSSGYLAEKGPGQGPG 370 380 390 400 410 420 430 440 450 460 470 mFLJ00 GDWLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPPVSLQTLTFCWV :: ::.:: :::.: : .:: .:.::.: :.: . .:.: :::::::::::: gi|559 GDGHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQTLTFCWE 420 430 440 450 460 470 480 490 500 510 520 mFLJ00 NNPEGEEEQEDEEEEEEEEEEEDWESEPKGSNAGCWGTSSVQRTEVRGRMLGDYLVR ..:: :::: .: : :: :.:: ::. :.:::: ::: :: :..: gi|559 SSPE-------EEEEARESEIED-------SDAGSWGAESTQRTEDRGRTLGHYMAR 480 490 500 510 520 >>gi|47077653|dbj|BAD18707.1| FLJ00190 protein [Homo sap (521 aa) initn: 1862 init1: 1152 opt: 1944 Z-score: 2069.4 bits: 392.6 E(): 1.5e-106 Smith-Waterman score: 2023; 59.735% identity (78.450% similar) in 529 aa overlap (1-527:10-521) 10 20 30 40 50 mFLJ00 PLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTY :::: :::.: ::::::::.::::.::::.::::::::::.: .:::::.: gi|470 AMAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 QSY-IKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEY :: . :: ::.::: : :.: .::::: .::.::::::...: ..:: :::.::.: gi|470 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 LFDVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLFPDTPYG ::.:: :::.::::: :.:: .::::::::::: :.:::.: ::::: :.::::: ::.: gi|470 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 QPVQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLAMPSLLLLL ::::: :: .::..:::::::.::. :::.::.:.:..::.: . : :..::::.:: gi|470 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILL 190 200 210 220 230 240 240 250 260 270 280 290 mFLJ00 IAAVAAGVAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILCPQKELT .. .:.:: :: . :::::: .: ::::::: . .:::::::: :: .::.:::::::: gi|470 LVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELT 250 260 270 280 290 300 300 310 320 330 340 mFLJ00 IRNRPAPQVRNPATLQAGPERDSTEDEDEDTDYD-DDGDSVQPYLERPLFISEKPRVMEH ::.:.:: ::: :. ..: .:::.:. . : .:: : :::.: : :.... .. : gi|470 RGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQEHQAPGH 310 320 330 340 350 360 350 360 370 380 390 400 mFLJ00 SETDESGVDSGGPWTSPVGSDGSSAWDSSDRSWSSTGDSSYKDEVGSSSCLDRKEPDQAP ::. .::::: : . : :.::::::::::::.:: :::. :..:::. : .: : :.: gi|470 SEA--GGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSW-DRAGSSGYLAEKGPGQGP 370 380 390 400 410 410 420 430 440 450 460 mFLJ00 CGDWLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPPVSLQTLTFCW :: ::.:: :::.: : .:: .:.::.: :.: . .:.: :::::::::::: gi|470 GGDGHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQTLTFCW 420 430 440 450 460 470 470 480 490 500 510 520 mFLJ00 VNNPEGEEEQEDEEEEEEEEEEEDWESEPKGSNAGCWGTSSVQRTEVRGRMLGDYLVR ..:: :::: .: : :: :.:: ::. :.:::: ::: :: :..: gi|470 ESSPE-------EEEEARESEIED-------SDAGSWGAESTQRTEDRGRTLGHYMAR 480 490 500 510 520 >>gi|73950610|ref|XP_855110.1| PREDICTED: similar to int (540 aa) initn: 1539 init1: 753 opt: 1832 Z-score: 1950.1 bits: 370.5 E(): 6.5e-100 Smith-Waterman score: 1908; 56.757% identity (75.483% similar) in 518 aa overlap (12-527:34-540) 10 20 30 40 mFLJ00 PLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGS :.: ::::.::::.:.::.:::::::: : gi|739 CHLQKARPSWRNFKHRRDVCQRVNRSLARGGKPCLAPPQNVTLLSRNFSVYLTWLPGPGY 10 20 30 40 50 60 50 60 70 80 90 100 mFLJ00 PPNVTYFVTYQSY-IKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRS ::::::.::: :: :..::: : :.: ::::.: .::.:::::: :.: .:: gi|739 SQNVTYFVAYQSAPTPRRWRKVKKCAGTKELACSLMCLEKQDLYNKFKGRVWAVSPSARS 70 80 90 100 110 120 110 120 130 140 150 160 mFLJ00 PRVESRYLEYLFDVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGS : :::.::.:::.:: ::::::.:. :.:: .::::::: ::: .:::.:.:::::. . gi|739 PSVESKYLDYLFEVEPAPPTLVVTRTEEILSINATYQLPHCMPPPDLKYEVDFWKEGIKN 130 140 150 160 170 180 170 180 190 200 210 220 mFLJ00 KTLFPDTPYGQPVQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAV :: :: :: ::::::::: . : ..:: :::.::. : :::.::.:.:.:: ::: . : gi|739 KTQFPATPRGQPVQIPLQPAISGHYCLRARTIYTFGDPKYSEFSKPTCFFLGAPGTSWAF 190 200 210 220 230 240 230 240 250 260 270 mFLJ00 LAMPSLLLLLIAAVAAG-VAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSD :.. ::: :. ..: : : :: . .::::: .: : ::::: ::.:::::::::::. : gi|739 LGLLPLLLPLLLVIAIGHVFWKSLTANPWFQRAKMPLALDFSGYRHPVATFQPSGPEYLD 250 260 270 280 290 300 280 290 300 310 320 330 mFLJ00 DLILCPQKELTIRNRPAPQVRNPATLQAGPERDSTEDEDEDTDYDDDGDSVQPYLERPLF :.:::::::: : :.: ::.:. .::: :..:::.: :: . :: : ::::: : : gi|739 ILVLCPQKELTRRVWPSPGVRTPVIFQAGYEKNSTEEEKEDEEDTDDCVSFQPYLEPPPF 310 320 330 340 350 360 340 350 360 370 380 390 mFLJ00 ISEKPRVMEHSETDESGVDSGGPWTSPVGSDGSSAWDSSDRSWSSTGDSSYKDEVGSSSC .... .. .::: .:. :..:: . ::: :.:::::.::: :: :: ::: gi|739 LGQEHQIPRHSE-------AGSTWSAPVQVEDSSATDASDRSWASTGGSSSWDEPGSSCY 370 380 390 400 410 400 410 420 430 440 450 mFLJ00 LDRKEPDQAPCGDWLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPP : .: : :.: :: :: : ::::.:.. .:.:::: :: : : : ...: ::: gi|739 LAKKTPGQGPSGDGCQEPLSLLEFSNDMSFLEDPLKDDLSFWANWGFSSPGLNIVPGEPP 420 430 440 450 460 470 460 470 480 490 500 510 mFLJ00 VSLQTLTFCWVNNPEGEEEQEDEEEEEEEEEEEDWESEPKGSNAGCWGTSSVQRTEVRGR :::.:::::: . :: :::.:.::: : .: .:. . ...: ::. :.:..::::. gi|739 VSLHTLTFCWDSCPEEEEEEEEEEEIEGGRE----QSKVEDDSTGNWGARSLQKSEVRGE 480 490 500 510 520 530 520 mFLJ00 MLGDYLVR :: :..: gi|739 TLGHYMAR 540 >>gi|108999239|ref|XP_001105189.1| PREDICTED: similar to (526 aa) initn: 1730 init1: 955 opt: 1734 Z-score: 1846.0 bits: 351.2 E(): 4.1e-94 Smith-Waterman score: 1815; 54.887% identity (74.060% similar) in 532 aa overlap (1-527:9-526) 10 20 30 40 50 mFLJ00 PLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQ :::: :::.: ::::::::.::::.:.::.::::::::::.: .:::::.:: gi|108 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSRNFSVYLTWLPGLGNPQDVTYFVAYQ 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 SY-IKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEYL : :: ::.::: : :.: .::::: .::.:::::::..: ..:: :::.:..:: gi|108 SSPTPRRWRKVEECAGTKELLCSMMCLKKQDLYNKFKGRVQTVSPSSKSPWVESEYVDYL 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 FDVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLFPDTPYGQ :. . : ::...: . . . : : .: : . ... :::: . .:::: ::.:: gi|108 FEDSPSHPGAVLSEVEVAVSQDQATVLQPGFPPLLIDWETPRWKEGGSLETLFPVTPHGQ 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 PVQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLAMPSLLLLLI ::.: :: .::.::::::::.::. :::.::.:. . ::.: . : :..::::.::. gi|108 PVRITLQPAASERHCLSARTIYTFSVPKYSEFSKPTWFVLEVPEASWAFLVLPSLLILLL 190 200 210 220 230 240 240 250 260 270 280 290 mFLJ00 AAVAAGVAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILCPQKELTI . .:.:: :: . :::::: .: ::::::: . ::::::::: :: .::.:::::::: gi|108 VIAAGGVIWKSLMGNPWFQRAKMPRALDFSGHTYPVATFQPSRPESLNDLLLCPQKELTR 250 260 270 280 290 300 300 310 320 330 340 mFLJ00 RNRPAPQVRNPATLQAGPERDSTEDEDEDTDYDD----DGDSVQPYLERPLFISEKPRVM : .:.:: ::: ::: ..: .:::::. . .. :: : :::.: : :.... .: gi|108 GVRLTPRVRAPATQQAGWKKDLAEDEDEEEEEEEEDTEDGVSFQPYIEPPSFLGQEHQVP 310 320 330 340 350 360 350 360 370 380 390 400 mFLJ00 EHSETDESGVDSGGPWTSPVGSDGSSAWDSSDRSWSSTGDSSYKDEVGSSSCLDRKEPDQ :::. .::::: : . . ..::::::::::::.:: :::. :..:::. : .: : : gi|108 GHSEV--GGVDSGRPRAPLLPGEGSSAWDSSDRSWASTVDSSW-DRAGSSGYLAEKGPGQ 370 380 390 400 410 410 420 430 440 450 460 mFLJ00 APCGDWLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPPVSLQTLTF .: :: :: :: ::: : : .:: :: ::.: :.: . .:.: :::::.:::: gi|108 GPGGDGHQEPLPPPEFSTDSGFLEELPKDDLSSWATWGTLPPESNLVPGGPPVSLRTLTF 420 430 440 450 460 470 470 480 490 500 510 520 mFLJ00 CWVNNPEGEEEQEDEEEEEEEEEEEDWESEPKGSNAGCWGTSSVQRTEVRGRMLGDYLVR :: ..:: ::::::: ::: . :.:: ::. :.:::: ::: : :..: gi|108 CWESSPE-----------EEEEEEEARESETEDSDAGSWGAESTQRTEERGRTRGYYMAR 480 490 500 510 520 >>gi|119888805|ref|XP_874034.2| PREDICTED: similar to in (524 aa) initn: 1386 init1: 736 opt: 1699 Z-score: 1808.8 bits: 344.3 E(): 4.8e-92 Smith-Waterman score: 1794; 55.514% identity (74.579% similar) in 535 aa overlap (1-527:9-524) 10 20 30 40 50 mFLJ00 PLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQ :::: ::::: ::: ::::.::::.:..:.:::::::: :.: ::::::.:: gi|119 MTGARRWAPLLLCLLQSAPGRPLLAPPQNVTLLSRDFSVYLTWLPGPGNPQNVTYFVAYQ 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 SYIKTG-WRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEYL :. :: :..::: : ::: ::::.: .: .::::::::.: .::: :::....:. gi|119 SFAPPRRWRRVKKCAGTKELVCSLMCLEKQDLCNKFKGRVQAVSPSARSPWVESKFMDYF 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 FDVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLFPDTPYGQ :.:: :::.::..: :.:: :::::::: :.:. ...:.:.::::: .:: :::: .:: gi|119 FEVEPAPPVLVFNQTEEILIVNATYQLPHCLPQPDMNYEVNFWKEGTKNKTRFPDTRHGQ 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 PVQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLAMPSLLLLLI ::::::: .: .:::::::.: . . :::.::::.:.::::::.. :.: . .:: :. gi|119 PVQIPLQPDTSGHHCLSARTIYFFGNPKYSEFSEPTCFFLEAPGSNWALLLLLPFLLPLL 190 200 210 220 230 240 240 250 260 270 280 290 mFLJ00 AAVAAG-VAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILCPQKELT ::: : : :: .. ::::: .: :.::.:: .: :::::.::: :::.:::::.: gi|119 LAVAIGPVMWKTFRENPWFQQTKMPQALSFSGHRLCGATFQPGGPECLHDLIVCPQKEVT 250 260 270 280 290 300 300 310 320 330 340 mFLJ00 IRNRPAPQVRNPATLQAGPERDSTEDED--EDTDYDD--DGDSVQPYLERPLFISEKPRV : : . .:: :: .:: ::.::::..: :.:: .: : : :::.: : :....:. gi|119 RRVRLTSRVRAPAPVQARPEKDSTEEKDGEESTDEEDLDPGVSFQPYVEPPPFLGQEPQ- 310 320 330 340 350 350 360 370 380 390 400 mFLJ00 MEHSETDESGVDSGGPWTSPVGSDGSSAWDSSDRSWSST-GDSSYKDEVGSSSCLDRKEP . . . .: ::: : ..:::: .:: ::: :: :.:: ::.:::. : .: : gi|119 ------SPGPTKAGEPWTPLVQGEGSSACSSSGRSWVSTAGSSSPWDEAGSSGYLAKKGP 360 370 380 390 400 410 410 420 430 440 450 460 mFLJ00 DQAPCGDWLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPPVSLQTL :. . :. :: . : .:: :: ::.::.: : : .:.: ::::::.:: gi|119 GQGMGREEHQKPLPPPKDSSSLG---EPSKDNLSSWTSWGLSSPGLNLVPGEPPVSLRTL 420 430 440 450 460 470 470 480 490 500 510 520 mFLJ00 TFCWVNNPEGEEEQEDEEEEEEEEEEEDW-ESEPKGSNAGCWGTSSVQRTEVRGRMLGDY :::: ..:: ..: ::::::: : ::: . :.:: ::..:.:::::: :: : gi|119 TFCWDSSPE-------DDEGEEEEEEEGWRESESEDSGAGSWGAKSLQRTEVRP--LGHY 480 490 500 510 520 mFLJ00 LVR :.: gi|119 LAR >>gi|119615519|gb|EAW95113.1| interleukin 28 receptor, a (437 aa) initn: 1649 init1: 1069 opt: 1586 Z-score: 1689.7 bits: 322.0 E(): 2.1e-85 Smith-Waterman score: 1665; 57.930% identity (77.533% similar) in 454 aa overlap (75-527:1-437) 50 60 70 80 90 100 mFLJ00 VTYFVTYQSYIKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVE .::::: .::.::::::...: ..:: :: gi|119 MMCLKKQDLYNKFKGRVRTVSPSSKSPWVE 10 20 30 110 120 130 140 150 160 mFLJ00 SRYLEYLFDVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLF :.::.:::.:: :::.::::: :.:: .::::::::::: :.:::.: ::::: :.:::: gi|119 SEYLDYLFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLF 40 50 60 70 80 90 170 180 190 200 210 220 mFLJ00 PDTPYGQPVQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLAMP : ::.:::::: :: .::..:::::::.::. :::.::.:.:..::.: . : :..: gi|119 PVTPHGQPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLP 100 110 120 130 140 150 230 240 250 260 270 280 mFLJ00 SLLLLLIAAVAAGVAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILC :::.::.. .:.:: :: . :::::: .: ::::::: . .:::::::: :: .::.:: gi|119 SLLILLLVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLC 160 170 180 190 200 210 290 300 310 320 330 340 mFLJ00 PQKELTIRNRPAPQVRNPATLQAGPERDSTEDEDEDTDYD-DDGDSVQPYLERPLFISEK :::::: ::.:.:: ::: :. ..: .:::.:. . : .:: : :::.: : :.... gi|119 PQKELTRGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQE 220 230 240 250 260 270 350 360 370 380 390 400 mFLJ00 PRVMEHSETDESGVDSGGPWTSPVGSDGSSAWDSSDRSWSSTGDSSYKDEVGSSSCLDRK .. :::. .::::: : . : :.::::::::::::.:: :::. :..:::. : .: gi|119 HQAPGHSEA--GGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSW-DRAGSSGYLAEK 280 290 300 310 320 410 420 430 440 450 460 mFLJ00 EPDQAPCGDWLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPPVSLQ : :.: :: ::.:: :::.: : .:: .:.::.: :.: . .:.: :::::: gi|119 GPGQGPGGDGHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQ 330 340 350 360 370 380 470 480 490 500 510 520 mFLJ00 TLTFCWVNNPEGEEEQEDEEEEEEEEEEEDWESEPKGSNAGCWGTSSVQRTEVRGRMLGD :::::: ..:: :::: .: : :: :.:: ::. :.:::: ::: :: gi|119 TLTFCWESSPE-------EEEEARESEIED-------SDAGSWGAESTQRTEDRGRTLGH 390 400 410 420 430 mFLJ00 YLVR :..: gi|119 YMAR >>gi|148698024|gb|EDL29971.1| interleukin 28 receptor al (254 aa) initn: 1482 init1: 1482 opt: 1494 Z-score: 1595.1 bits: 303.8 E(): 3.8e-80 Smith-Waterman score: 1494; 96.943% identity (97.817% similar) in 229 aa overlap (1-227:9-237) 10 20 30 40 50 mFLJ00 PLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MWRADRWAPLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQ 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 SYIKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEYLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SYIKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEYLF 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 DVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLFPDTPYGQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLFPDTPYGQP 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 VQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLA--MPSLLLLL ::::::::::::::::::::::::::::::::::::::::::: ::.: .:::: gi|148 VQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGGCRAALEWNIPSLLPCH 190 200 210 220 230 240 240 250 260 270 280 290 mFLJ00 IAAVAAGVAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILCPQKELT gi|148 SGDTRSFMIEWFKV 250 527 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 22:23:19 2009 done: Thu Mar 12 22:30:32 2009 Total Scan time: 968.530 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]