# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msp01005.fasta.nr -Q ../query/mKIAA0278.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0278, 406 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919340 sequences Expectation_n fit: rho(ln(x))= 5.5173+/-0.000191; mu= 10.0418+/- 0.011 mean_var=86.0055+/-17.287, 0's: 35 Z-trim: 37 B-trim: 3566 in 2/65 Lambda= 0.138297 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81882082|sp|Q9WV31.1|ARC_MOUSE RecName: Full=Ac ( 396) 2732 554.6 1.4e-155 gi|81863214|sp|Q63053.1|ARC_RAT RecName: Full=Acti ( 396) 2691 546.4 4.1e-153 gi|644829|gb|AAA68695.1| growth factor gi|9506 ( 396) 2687 545.6 7.1e-153 gi|109087648|ref|XP_001090976.1| PREDICTED: simila ( 489) 2556 519.6 6.1e-145 gi|74738627|sp|Q7LC44.1|ARC_HUMAN RecName: Full=Ac ( 396) 2538 515.9 6.3e-144 gi|119922443|ref|XP_597621.3| PREDICTED: similar t ( 396) 2498 507.9 1.6e-141 gi|126322377|ref|XP_001370970.1| PREDICTED: simila ( 400) 2261 460.7 2.7e-127 gi|194215148|ref|XP_001917044.1| PREDICTED: simila ( 392) 2087 425.9 7.6e-117 gi|149410164|ref|XP_001512750.1| PREDICTED: simila ( 401) 2073 423.1 5.4e-116 gi|82100500|sp|Q8AWC3.1|ARC_CHICK RecName: Full=Ac ( 404) 1866 381.9 1.5e-103 gi|224046790|ref|XP_002186861.1| PREDICTED: activi ( 404) 1857 380.1 5.1e-103 gi|9966423|gb|AAG10254.1| ARC [Mus musculus] ( 242) 1700 348.6 9.2e-94 gi|119602727|gb|EAW82321.1| activity-regulated cyt ( 362) 1344 277.7 3e-72 gi|119602726|gb|EAW82320.1| activity-regulated cyt ( 360) 1340 276.9 5.2e-72 gi|114622029|ref|XP_528245.2| PREDICTED: activity- ( 625) 1264 261.9 2.9e-67 gi|117671280|gb|ABK56827.1| activity-regulated cyt ( 216) 1077 224.2 2.2e-56 gi|55710027|gb|AAV58856.1| activity-regulated cyto ( 132) 534 115.7 6.3e-24 gi|183206338|gb|ACC54426.1| activity-regulated cyt ( 197) 356 80.3 4.2e-13 gi|222778469|gb|ACM67355.1| activity-regulated cyt ( 197) 350 79.1 9.6e-13 gi|27764661|gb|AAO23086.1| putative gag-pol precur ( 971) 213 52.3 0.00055 gi|78708038|gb|ABB47013.1| retrotransposon protein (1475) 212 52.3 0.00086 gi|189531845|ref|XP_001921717.1| PREDICTED: simila (1309) 208 51.4 0.0014 gi|156540346|ref|XP_001601764.1| PREDICTED: simila (2014) 210 52.0 0.0014 gi|53981366|gb|AAV24920.1| putative polyprotein [O (1279) 206 51.0 0.0018 gi|189533424|ref|XP_001919627.1| PREDICTED: simila (1272) 204 50.6 0.0023 gi|21742157|emb|CAD40750.1| OSJNBa0081G05.3 [Oryza ( 555) 197 49.0 0.0033 gi|116309214|emb|CAH66306.1| OSIGBa0135K14.3 [Oryz ( 555) 197 49.0 0.0033 >>gi|81882082|sp|Q9WV31.1|ARC_MOUSE RecName: Full=Activi (396 aa) initn: 2732 init1: 2732 opt: 2732 Z-score: 2949.5 bits: 554.6 E(): 1.4e-155 Smith-Waterman score: 2732; 100.000% identity (100.000% similar) in 396 aa overlap (11-406:1-396) 10 20 30 40 50 60 mKIAA0 PVRSRSTDDQMELDHMTTGGLHAYPAPRGGPAAKPNVILQIGKCRAEMLEHVRRTHRHLL :::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 MELDHMTTGGLHAYPAPRGGPAAKPNVILQIGKCRAEMLEHVRRTHRHLL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 TEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLCRCQETIANLERWVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLCRCQETIANLERWVK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 REMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSVGVGGPEPYCQEADGYDYTVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 REMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSVGVGGPEPYCQEADGYDYTVS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 PYAITPPPAAGELPEQESVEAQQYQSWGPGEDGQPSPGVDTQIFEDPREFLSHLEEYLRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PYAITPPPAAGELPEQESVEAQQYQSWGPGEDGQPSPGVDTQIFEDPREFLSHLEEYLRQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 VGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRELEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 VGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRELEL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 PQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKLKRFLRHPLPKTLEQLIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKLKRFLRHPLPKTLEQLIQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 RGMEVQDGLEQAAEPSGTPLPTEDETEALTPALTSESVASDRTQPE :::::::::::::::::::::::::::::::::::::::::::::: gi|818 RGMEVQDGLEQAAEPSGTPLPTEDETEALTPALTSESVASDRTQPE 360 370 380 390 >>gi|81863214|sp|Q63053.1|ARC_RAT RecName: Full=Activity (396 aa) initn: 2691 init1: 2691 opt: 2691 Z-score: 2905.3 bits: 546.4 E(): 4.1e-153 Smith-Waterman score: 2691; 98.737% identity (99.242% similar) in 396 aa overlap (11-406:1-396) 10 20 30 40 50 60 mKIAA0 PVRSRSTDDQMELDHMTTGGLHAYPAPRGGPAAKPNVILQIGKCRAEMLEHVRRTHRHLL :::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 MELDHMTTGGLHAYPAPRGGPAAKPNVILQIGKCRAEMLEHVRRTHRHLL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 TEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLCRCQETIANLERWVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLCRCQETIANLERWVK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 REMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSVGVGGPEPYCQEADGYDYTVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 REMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSVGVGGPEPYCQEADGYDYTVS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 PYAITPPPAAGELPEQESVEAQQYQSWGPGEDGQPSPGVDTQIFEDPREFLSHLEEYLRQ ::::::::::::::::::: ::::::: :::::::::::::::::::::::::::::::: gi|818 PYAITPPPAAGELPEQESVGAQQYQSWVPGEDGQPSPGVDTQIFEDPREFLSHLEEYLRQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 VGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRELEL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|818 VGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRELDL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 PQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKLKRFLRHPLPKTLEQLIQ ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|818 PQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKFKRFLRHPLPKTLEQLIQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 RGMEVQDGLEQAAEPSGTPLPTEDETEALTPALTSESVASDRTQPE :::::::::::::::: ::::::::::::::::::::::::::::: gi|818 RGMEVQDGLEQAAEPSVTPLPTEDETEALTPALTSESVASDRTQPE 360 370 380 390 >>gi|644829|gb|AAA68695.1| growth factor gi|9506397| (396 aa) initn: 2687 init1: 2687 opt: 2687 Z-score: 2901.0 bits: 545.6 E(): 7.1e-153 Smith-Waterman score: 2687; 98.485% identity (99.242% similar) in 396 aa overlap (11-406:1-396) 10 20 30 40 50 60 mKIAA0 PVRSRSTDDQMELDHMTTGGLHAYPAPRGGPAAKPNVILQIGKCRAEMLEHVRRTHRHLL :::::::::::::::::::::::::::::::::::::::::::::::::: gi|644 MELDHMTTGGLHAYPAPRGGPAAKPNVILQIGKCRAEMLEHVRRTHRHLL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 TEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLCRCQETIANLERWVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|644 TEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLCRCQETIANLERWVK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 REMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSVGVGGPEPYCQEADGYDYTVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|644 REMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSVGVGGPEPYCQEADGYDYTVS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 PYAITPPPAAGELPEQESVEAQQYQSWGPGEDGQPSPGVDTQIFEDPREFLSHLEEYLRQ ::::::::::::::::::: ::::::: ::::::::::.::::::::::::::::::::: gi|644 PYAITPPPAAGELPEQESVGAQQYQSWVPGEDGQPSPGLDTQIFEDPREFLSHLEEYLRQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 VGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRELEL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|644 VGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRELDL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 PQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKLKRFLRHPLPKTLEQLIQ ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|644 PQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKFKRFLRHPLPKTLEQLIQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 RGMEVQDGLEQAAEPSGTPLPTEDETEALTPALTSESVASDRTQPE :::::::::::::::: ::::::::::::::::::::::::::::: gi|644 RGMEVQDGLEQAAEPSVTPLPTEDETEALTPALTSESVASDRTQPE 360 370 380 390 >>gi|109087648|ref|XP_001090976.1| PREDICTED: similar to (489 aa) initn: 2556 init1: 2556 opt: 2556 Z-score: 2758.5 bits: 519.6 E(): 6.1e-145 Smith-Waterman score: 2556; 92.269% identity (96.509% similar) in 401 aa overlap (6-406:89-489) 10 20 30 mKIAA0 PVRSRSTDDQMELDHMTTGGLHAYPAPRGGPAAKP :: :::::: :.:::::::.::::::::: gi|109 QLHTGPRPPGTAAGLQRPPSVRPEEFVACPSTCAQMELDHRTSGGLHAYPGPRGGPAAKP 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 NVILQIGKCRAEMLEHVRRTHRHLLTEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQ :::::::::::::::::::::::::::::::::::::::::::::::.::::::::.::: gi|109 NVILQIGKCRAEMLEHVRRTHRHLLTEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQ 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 RWKKSIKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESMGGKYPVGSEPAR ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|109 RWKKSIKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSEPAR 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 HTVSVGVGGPEPYCQEADGYDYTVSPYAITPPPAAGELPEQESVEAQQYQSWGPGEDGQP ::::::::::: ::.:::::::::::::::::::::::: :: .:::::: : ::::::: gi|109 HTVSVGVGGPESYCHEADGYDYTVSPYAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQP 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA0 SPGVDTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SPGVDTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWV 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA0 EFKKEFLQYSEGTLSREAIQRELELPQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYV :::.::::::::.:::::.::::.:::::::::::::::::::::::::::.:::::::: gi|109 EFKREFLQYSEGALSREAVQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYV 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA0 VGTLQPKLKRFLRHPLPKTLEQLIQRGMEVQDGLEQAAEPSGTPLPTEDETEALTPALTS :::::::::::::::::::::::::::::::: :::::::. .:.:::.:.:::: .: gi|109 VGTLQPKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAVPHVPAEDEAETLTPAPNS 420 430 440 450 460 470 400 mKIAA0 ESVASDRTQPE ::::::::::: gi|109 ESVASDRTQPE 480 >>gi|74738627|sp|Q7LC44.1|ARC_HUMAN RecName: Full=Activi (396 aa) initn: 2538 init1: 2538 opt: 2538 Z-score: 2740.3 bits: 515.9 E(): 6.3e-144 Smith-Waterman score: 2538; 92.929% identity (96.717% similar) in 396 aa overlap (11-406:1-396) 10 20 30 40 50 60 mKIAA0 PVRSRSTDDQMELDHMTTGGLHAYPAPRGGPAAKPNVILQIGKCRAEMLEHVRRTHRHLL ::::: :.:::::::.:::: .:::::::::::::::::::::::::::: gi|747 MELDHRTSGGLHAYPGPRGGQVAKPNVILQIGKCRAEMLEHVRRTHRHLL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 TEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLCRCQETIANLERWVK .:::::::::::::::::::::.::::::::.:::::::::::::::::::::::::::: gi|747 AEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRWKKSIKACLCRCQETIANLERWVK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 REMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSVGVGGPEPYCQEADGYDYTVS :::::::::::::::::::::: ::::::::: ::::::::::::: ::.:::::::::: gi|747 REMHVWREVFYRLERWADRLESTGGKYPVGSESARHTVSVGVGGPESYCHEADGYDYTVS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 PYAITPPPAAGELPEQESVEAQQYQSWGPGEDGQPSPGVDTQIFEDPREFLSHLEEYLRQ :::::::::::::: :: .:::::: : :::::::::::::::::::::::::::::::: gi|747 PYAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQPSPGVDTQIFEDPREFLSHLEEYLRQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 VGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRELEL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|747 VGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRELDL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 PQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKLKRFLRHPLPKTLEQLIQ ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|747 PQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVGTLQPKLKRFLRHPLPKTLEQLIQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 RGMEVQDGLEQAAEPSGTPLPTEDETEALTPALTSESVASDRTQPE ::::::: :::::::.: ::.:::.:.:::: .:::::::::::: gi|747 RGMEVQDDLEQAAEPAGPHLPVEDEAETLTPAPNSESVASDRTQPE 360 370 380 390 >>gi|119922443|ref|XP_597621.3| PREDICTED: similar to ac (396 aa) initn: 2498 init1: 2498 opt: 2498 Z-score: 2697.2 bits: 507.9 E(): 1.6e-141 Smith-Waterman score: 2498; 91.667% identity (96.212% similar) in 396 aa overlap (11-406:1-396) 10 20 30 40 50 60 mKIAA0 PVRSRSTDDQMELDHMTTGGLHAYPAPRGGPAAKPNVILQIGKCRAEMLEHVRRTHRHLL ::::: :::::::::.::.::::::::::::::::::::::::::::::: gi|119 MELDHRTTGGLHAYPGPRSGPAAKPNVILQIGKCRAEMLEHVRRTHRHLL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 TEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLCRCQETIANLERWVK .:::::::::::::::::::::.::::::::.::::::::::::: :::::::::::::: gi|119 AEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRWKKSIKACLSRCQETIANLERWVK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 REMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSVGVGGPEPYCQEADGYDYTVS :::::::::::::::::::::: ::::::::.:::::::::::::: ::::::.:::::: gi|119 REMHVWREVFYRLERWADRLESGGGKYPVGSDPARHTVSVGVGGPEGYCQEADNYDYTVS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 PYAITPPPAAGELPEQESVEAQQYQSWGPGEDGQPSPGVDTQIFEDPREFLSHLEEYLRQ ::::: :::::.:: :: :::::: :::::::: :::::::.::::::::::::.:::: gi|119 PYAITSPPAAGQLPGQEEVEAQQYPPWGPGEDGQLSPGVDTQVFEDPREFLSHLEDYLRQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 VGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRELEL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|119 VGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRELDL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 PQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKLKRFLRHPLPKTLEQLIQ :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|119 PQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKLKRFLRPPLPKTLEQLIQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 RGMEVQDGLEQAAEPSGTPLPTEDETEALTPALTSESVASDRTQPE .::::::::: ::::.: :.:.:.:.::::::.::::::::::: gi|119 KGMEVQDGLEPAAEPTGPHPPAEEEAESLTPALTNESVASDRTQPE 360 370 380 390 >>gi|126322377|ref|XP_001370970.1| PREDICTED: similar to (400 aa) initn: 2282 init1: 1122 opt: 2261 Z-score: 2441.5 bits: 460.7 E(): 2.7e-127 Smith-Waterman score: 2261; 82.836% identity (91.791% similar) in 402 aa overlap (11-406:1-400) 10 20 30 40 50 60 mKIAA0 PVRSRSTDDQMELDHMTTGGLHAYPAPRGGPAAKPNVILQIGKCRAEMLEHVRRTHRHLL :::.:...::::.: .:::::::::::::::::::::::::::.:::::: gi|126 MELEHLSSGGLHTYHGPRGGPAAKPNVILQIGKCRAEMLEHVRKTHRHLL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 TEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLCRCQETIANLERWVK ::::::::::::::::::::::::::::::::::::::::::::: :::::::.:::::: gi|126 TEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLSRCQETIAHLERWVK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 REMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSVGVGGPEPYCQEADGYDYTVS :::.::::::::::.::::::::::::::..::.:.:::::::::: ::::.: :::::: gi|126 REMNVWREVFYRLEKWADRLESMGGKYPVSGEPTRQTVSVGVGGPESYCQETDPYDYTVS 120 130 140 150 160 170 190 200 210 220 230 mKIAA0 PYAITPP-P----AAGELPEQESVEAQQYQSWGPG-EDGQPSPGVDTQIFEDPREFLSHL ::::::: : :.:: .: : ::: :. ::: ::::::::::::::::::: gi|126 PYAITPPTPVGVTAGGEALSHEPSEIQQYPPWSSTTEDGTLSPGVDTQIFEDPREFLSHL 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 EEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAI ::::.::::.:::::::::::::::::::::.:::::::::::::::::::::::.:.:: gi|126 EEYLKQVGGTEEYWLSQIQNHMNGPAKKWWEYKQGSVKNWVEFKKEFLQYSEGTLTRDAI 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 QRELELPQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKLKRFLRHPLPKT .:::.:::::::::::::::::::::::::::.:::::::::::::::::.::::::::: gi|126 KRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVGTLQPKLKHFLRHPLPKT 300 310 320 330 340 350 360 370 380 390 400 mKIAA0 LEQLIQRGMEVQDGLEQAAEPSGTPLPTEDETEALTPALTSESVASDRTQPE ::::::::.:::.::::. .: .::. :.::::. ::.::: :::: gi|126 LEQLIQRGQEVQEGLEQGEDPIEQQTQSEDNDESLTPAM--ESLASDGTQPE 360 370 380 390 400 >>gi|194215148|ref|XP_001917044.1| PREDICTED: similar to (392 aa) initn: 1910 init1: 1872 opt: 2087 Z-score: 2254.0 bits: 425.9 E(): 7.6e-117 Smith-Waterman score: 2087; 90.616% identity (94.721% similar) in 341 aa overlap (68-406:55-392) 40 50 60 70 80 90 mKIAA0 ILQIGKCRAEMLEHVRRTHRHLLTEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRW ::::.: ::: .:: .::::::: :::::: gi|194 RAAPDSGDGEGVVVVEVMVVAVRCHGTNGAERELNGQHRS-SKLXSNLDGYVP-GDSQRW 30 40 50 60 70 80 100 110 120 130 140 150 mKIAA0 KKSIKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESMGGKYPVGSEPARHT : :::::::::::::::::::::::::::::.::::::::::::.::.:: :::::::.: gi|194 K-SIKACLCRCQETIANLERWVKREMHVWREIFYRLERWADRLEAMGSKYQVGSEPARQT 90 100 110 120 130 140 160 170 180 190 200 210 mKIAA0 VSVGVGGPEPYCQEADGYDYTVSPYAITPPPAAGELPEQESVEAQQYQSWGPGEDGQPSP ::::::::: :::.::.::::::::::: :::::::: :: :::::: :::::::: :: gi|194 VSVGVGGPENYCQDADAYDYTVSPYAITSPPAAGELPGQEPVEAQQYPPWGPGEDGQLSP 150 160 170 180 190 200 220 230 240 250 260 270 mKIAA0 GVDTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GVDTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEF 210 220 230 240 250 260 280 290 300 310 320 330 mKIAA0 KKEFLQYSEGTLSREAIQRELELPQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVG :::::::::::::::::::::.:::::::::::::::::::::::::::.:::::::::: gi|194 KKEFLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVG 270 280 290 300 310 320 340 350 360 370 380 390 mKIAA0 TLQPKLKRFLRHPLPKTLEQLIQRGMEVQDGLEQAAEPSGTPLPTEDETEA--LTPALTS ::::::::::::::::::::::::::::::::::::::.: :::::: :: .:::::. gi|194 TLQPKLKRFLRHPLPKTLEQLIQRGMEVQDGLEQAAEPAGPRLPTEDEGEAESVTPALTN 330 340 350 360 370 380 400 mKIAA0 ESVASDRTQPE ::::::::::: gi|194 ESVASDRTQPE 390 >>gi|149410164|ref|XP_001512750.1| PREDICTED: similar to (401 aa) initn: 1895 init1: 1091 opt: 2073 Z-score: 2238.8 bits: 423.1 E(): 5.4e-116 Smith-Waterman score: 2073; 75.990% identity (89.109% similar) in 404 aa overlap (11-406:1-401) 10 20 30 40 50 mKIAA0 PVRSRSTDDQMELDHM--TTG-----GLHAYPAPRGGPAAKPNVILQIGKCRAEMLEHVR ::::.. ..: ::: ::. ::: .::::::::::::::::::::: gi|149 MELDRLNPSSGLHPSSGLHPYPGLRGGATAKPNVILQIGKCRAEMLEHVR 10 20 30 40 50 60 70 80 90 100 110 mKIAA0 RTHRHLLTEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLCRCQETIA .::::::::::.::::::::::.::::::.:::::::..::::::::::::: ::::::: gi|149 KTHRHLLTEVSRQVERELKGLHKSVGKLESNLDGYVPSSDSQRWKKSIKACLSRCQETIA 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 NLERWVKREMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSVGVGGPEPYCQEAD .:::::::::.:::::::::::::::::.::::::.: : ::.:::::::::: : . gi|149 HLERWVKREMNVWREVFYRLERWADRLEAMGGKYPAG-EQARRTVSVGVGGPETCCPGDE 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 GYDYTVSPYAITPPPAAGELPEQESVEAQQYQSWGPGEDGQP-SPGVDTQIFEDPREFLS .:: .::::. ::..:: ::. . :.::.: . .: :::::::::::::::: gi|149 SYDCPISPYAV--PPSTGESPESLDQGDQHYQQWFALPEESPVSPGVDTQIFEDPREFLR 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 HLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSRE :::.::.::::.:: ::::::::::::::::::.::::::::.::::::::::::::.:. gi|149 HLEKYLKQVGGTEEDWLSQIQNHMNGPAKKWWEYKQGSVKNWLEFKKEFLQYSEGTLTRD 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 AIQRELELPQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKLKRFLRHPLP :..:::.:::::::::::::::::::::::::::.::::::::::::::::::::.:::: gi|149 ALKRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVGTLQPKLKRFLHHPLP 290 300 310 320 330 340 360 370 380 390 400 mKIAA0 KTLEQLIQRGMEVQDGLEQAAEPSGTPLPTEDETEALTPALTSESVASDRTQPE ::::::::::.:::.::: . .:.: .::. :.::::.:.::.::. : :: gi|149 KTLEQLIQRGQEVQNGLEPTDDPAGQRTQSEDNDESLTPAVTNESTASEGTLPE 350 360 370 380 390 400 >>gi|82100500|sp|Q8AWC3.1|ARC_CHICK RecName: Full=Activi (404 aa) initn: 1326 init1: 960 opt: 1866 Z-score: 2015.6 bits: 381.9 E(): 1.5e-103 Smith-Waterman score: 1866; 71.393% identity (87.313% similar) in 402 aa overlap (11-406:1-395) 10 20 30 40 50 60 mKIAA0 PVRSRSTDDQMELDHMTTGGLHAYPAPRGGPAAKPNVILQIGKCRAEMLEHVRRTHRHLL :.::..:..:.:.. . :: : ::::::::::::::::::::::::::: gi|821 MQLDNVTNAGIHSFQGHRG-VANKPNVILQIGKCRAEMLEHVRRTHRHLL 10 20 30 40 70 80 90 100 110 120 mKIAA0 TEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKSIKACLCRCQETIANLERWVK .:::::::::::::..:::::::::. .::: :.::::::::::: :::::::.:::::: gi|821 SEVSKQVERELKGLQKSVGKLENNLEDHVPT-DNQRWKKSIKACLARCQETIAHLERWVK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 REMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSVGVGGPEPYCQEADGYDYTVS :::.::.:::.:::.:::::::::::: : : ...:::::::::: .:.. :::... gi|821 REMNVWKEVFFRLEKWADRLESMGGKYCPG-EHGKQTVSVGVGGPEIRPSEGEIYDYALD 110 120 130 140 150 160 190 200 210 220 230 mKIAA0 P---YAITPPPAAGELPEQESVEAQQYQSWGPGEDGQPSPGVDTQIFEDPREFLSHLEEY ::.:: : ::.: ... ..:: . .::. :: :.:::::::.::::::::: gi|821 MSQMYALTPAP--GEVPSIPQAH-DSYQWVSVSEDAPASP-VETQIFEDPHEFLSHLEEY 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 LRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRE :.::::.:::::::::::::::::::::.:: ::::::::::::::::::::.:.::.:: gi|821 LKQVGGTEEYWLSQIQNHMNGPAKKWWEYKQDSVKNWVEFKKEFLQYSEGTLTRDAIKRE 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 LELPQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKLKRFLRHPLPKTLEQ :.::::.::::::::::::::::::::::.:::::::::::::::::::: .:::::::: gi|821 LDLPQKEGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVGTLQPKLKRFLSYPLPKTLEQ 290 300 310 320 330 340 360 370 380 390 400 mKIAA0 LIQRGMEVQDGLEQAAEPSG--TP-LPTEDETEALTPALTSESVASDRTQPE ::::: ::: ..... ::: :: . . : .:.. :. :. : :. :::: gi|821 LIQRGKEVQGNMDHSEEPSPQRTPEIQSGDSVESMPPSTTASPVPSNGTQPEPPSPPATV 350 360 370 380 390 400 gi|821 I 406 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 19:26:02 2009 done: Fri Mar 13 19:32:31 2009 Total Scan time: 881.540 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]