Comparison of KIAA cDNA sequences between mouse and human (KIAA0278)
<<Original sequence data>>
mouse mKIAA0278 (msp01005) length: 1305 bp, CDS: 8 - 1228
human KIAA0278 (ha06634) length: 2935 bp, CDS: 2 - 1384
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 157 - 163 2 5 71.4
CDS: 164 - 1384 1040 181 14.8
3'UTR: 1385 - 1463 63 14 18.2
amino acid
CDS: 164 - 1384 373 34 8.4
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msp01005 1 .................................................. 1
ha06634 1 CGGACGCGTGGGCCGCAGCAGCCGAGCCGGACCTGCCTCCCCGGGCGTGC 50
G R V G R S S R A G P A S P G V L
51 ----+----*----+----*----+----*----+----*----+----* 100
msp01005 1 .................................................. 1
ha06634 51 TCCGCCGGCCCCGCCGCCGGCCCGCAGCGACAGACAGGCGCTCCCCGCAG 100
R R P R R R P A A T D R R S P Q
101 ----+----*----+----*----+----*----+----*----+----* 150
msp01005 1 .................................................. 1
ha06634 101 CTCCGCACGGGACCCAGGCCGCCGGACCCCAGCGCCGGACCACCGTCCGT 150
L R T G P R P P D P S A G P P S V
151 ----+----*----+----*----+----*----+----*----+----* 200
S * P V R S R S T D D Q M E L
msp01005 1 ......TTCTTAGCCTGTTCGGAGCCGCAGCACCGACGACCAGATGGAGC 44
|| || |||| |||||| || ||||||||||
ha06634 151 CCGCCCCGAGGAGTTTGCCGCCTGCCGGAGCACCTGCGCACAGATGGAGC 200
R P E E F A A C R S T C A Q M E L
201 ----+----*----+----*----+----*----+----*----+----* 250
D H M T T G G L H A Y P A P R G
msp01005 45 TGGACCATATGACCACCGGCGGCCTCCACGCCTACCCTGCCCCGCGGGGT 94
||||||| ||||| |||||| |||||||||||||| | ||||||||
ha06634 201 TGGACCACCGGACCAGCGGCGGGCTCCACGCCTACCCCGGGCCGCGGGGC 250
D H R T S G G L H A Y P G P R G
251 ----+----*----+----*----+----*----+----*----+----* 300
G P A A K P N V I L Q I G K C R A
msp01005 95 GGGCCGGCCGCCAAACCCAATGTGATCCTGCAGATTGGTAAGTGCCGAGC 144
|||| || ||||| ||||| |||||||||||||| || |||||||| ||
ha06634 251 GGGCAGGTGGCCAAGCCCAACGTGATCCTGCAGATCGGGAAGTGCCGGGC 300
G Q V A K P N V I L Q I G K C R A
301 ----+----*----+----*----+----*----+----*----+----* 350
E M L E H V R R T H R H L L T E V
msp01005 145 TGAGATGCTGGAACACGTACGGAGGACCCACCGGCATCTGTTGACCGAAG 194
||||||||||| ||||| ||| |||| |||||||| ||| || |||| |
ha06634 301 CGAGATGCTGGAGCACGTGCGGCGGACGCACCGGCACCTGCTGGCCGAGG 350
E M L E H V R R T H R H L L A E V
351 ----+----*----+----*----+----*----+----*----+----* 400
S K Q V E R E L K G L H R S V G
msp01005 195 TGTCCAAGCAGGTGGAGCGAGAGCTGAAAGGGTTGCACAGGTCGGTGGGC 244
||||||||||||||||||| |||||||| ||| ||||| ||||||| ||
ha06634 351 TGTCCAAGCAGGTGGAGCGCGAGCTGAAGGGGCTGCACCGGTCGGTCGGG 400
S K Q V E R E L K G L H R S V G
401 ----+----*----+----*----+----*----+----*----+----* 450
K L E N N L D G Y V P T G D S Q R
msp01005 245 AAGCTGGAGAACAACTTGGACGGCTACGTGCCCACCGGCGACTCACAGCG 294
|||||||||| |||| ||||||||||||||||||| ||||||| |||||
ha06634 401 AAGCTGGAGAGCAACCTGGACGGCTACGTGCCCACGAGCGACTCGCAGCG 450
K L E S N L D G Y V P T S D S Q R
451 ----+----*----+----*----+----*----+----*----+----* 500
W K K S I K A C L C R C Q E T I A
msp01005 295 CTGGAAGAAGTCCATCAAGGCCTGTCTTTGCCGCTGCCAGGAGACCATCG 344
|||||||||||||||||||||||| || ||||||||||||||||||||||
ha06634 451 CTGGAAGAAGTCCATCAAGGCCTGCCTGTGCCGCTGCCAGGAGACCATCG 500
W K K S I K A C L C R C Q E T I A
501 ----+----*----+----*----+----*----+----*----+----* 550
N L E R W V K R E M H V W R E V
msp01005 345 CCAACCTGGAGCGCTGGGTCAAGCGTGAGATGCACGTGTGGAGGGAGGTC 394
||||||||||||||||||||||||| ||||||||||||||| | |||||
ha06634 501 CCAACCTGGAGCGCTGGGTCAAGCGCGAGATGCACGTGTGGCGCGAGGTG 550
N L E R W V K R E M H V W R E V
551 ----+----*----+----*----+----*----+----*----+----* 600
F Y R L E R W A D R L E S M G G K
msp01005 395 TTCTACCGTCTGGAGAGGTGGGCTGACCGCCTGGAGTCCATGGGCGGCAA 444
|||||||| |||||| | ||||| |||||||||||||||| |||||||||
ha06634 551 TTCTACCGCCTGGAGCGCTGGGCCGACCGCCTGGAGTCCACGGGCGGCAA 600
F Y R L E R W A D R L E S T G G K
601 ----+----*----+----*----+----*----+----*----+----* 650
Y P V G S E P A R H T V S V G V G
msp01005 445 ATACCCAGTGGGCAGCGAGCCGGCCCGCCACACTGTCTCTGTAGGTGTGG 494
||||| |||||||||||| | ||||||||||| || || || || ||||
ha06634 601 GTACCCGGTGGGCAGCGAGTCAGCCCGCCACACCGTTTCCGTGGGCGTGG 650
Y P V G S E S A R H T V S V G V G
651 ----+----*----+----*----+----*----+----*----+----* 700
G P E P Y C Q E A D G Y D Y T V
msp01005 495 GGGGTCCAGAGCCCTACTGCCAGGAAGCTGATGGCTATGACTATACCGTT 544
||||||| ||| ||||||||| || || || ||||| ||||| |||||
ha06634 651 GGGGTCCCGAGAGCTACTGCCACGAGGCAGACGGCTACGACTACACCGTC 700
G P E S Y C H E A D G Y D Y T V
701 ----+----*----+----*----+----*----+----*----+----* 750
S P Y A I T P P P A A G E L P E Q
msp01005 545 AGCCCCTATGCCATCACCCCGCCACCTGCCGCAGGAGAACTGCCTGAACA 594
|||||||| |||||||||||||| || ||||| || || ||||| | ||
ha06634 701 AGCCCCTACGCCATCACCCCGCCCCCAGCCGCTGGCGAGCTGCCCGGGCA 750
S P Y A I T P P P A A G E L P G Q
751 ----+----*----+----*----+----*----+----*----+----* 800
E S V E A Q Q Y Q S W G P G E D G
msp01005 595 GGAGTCAGTTGAGGCTCAGCAATATCAGTCTTGGGGGCCAGGTGAGGATG 644
|||| | | ||||| ||||| || ||| | |||| || || ||||| |
ha06634 751 GGAGCCCGCCGAGGCCCAGCAGTACCAGCCGTGGGTCCCCGGCGAGGACG 800
E P A E A Q Q Y Q P W V P G E D G
801 ----+----*----+----*----+----*----+----*----+----* 850
Q P S P G V D T Q I F E D P R E
msp01005 645 GGCAACCGAGCCCTGGTGTGGATACACAGATCTTCGAGGACCCACGGGAG 694
|||| || ||||| || ||||| || ||||||||||||||||| || |||
ha06634 801 GGCAGCCCAGCCCCGGCGTGGACACGCAGATCTTCGAGGACCCTCGAGAG 850
Q P S P G V D T Q I F E D P R E
851 ----+----*----+----*----+----*----+----*----+----* 900
F L S H L E E Y L R Q V G G S E E
msp01005 695 TTCCTGAGCCACCTGGAAGAGTACCTGCGGCAGGTGGGTGGCTCTGAAGA 744
|||||||||||||| || |||||| ||||||||||||| |||||||| ||
ha06634 851 TTCCTGAGCCACCTAGAGGAGTACTTGCGGCAGGTGGGCGGCTCTGAGGA 900
F L S H L E E Y L R Q V G G S E E
901 ----+----*----+----*----+----*----+----*----+----* 950
Y W L S Q I Q N H M N G P A K K W
msp01005 745 ATATTGGCTGTCCCAGATCCAGAACCACATGAATGGGCCAGCCAAGAAGT 794
|| |||||||||||||||||||| |||||||| ||||| ||||||||||
ha06634 901 GTACTGGCTGTCCCAGATCCAGAATCACATGAACGGGCCGGCCAAGAAGT 950
Y W L S Q I Q N H M N G P A K K W
951 ----+----*----+----*----+----*----+----*----+----* 1000
W E F K Q G S V K N W V E F K K
msp01005 795 GGTGGGAGTTCAAGCAGGGCTCGGTGAAGAACTGGGTGGAGTTCAAGAAG 844
|||||||||||||||||||||| |||||||||||||||||||||||||||
ha06634 951 GGTGGGAGTTCAAGCAGGGCTCCGTGAAGAACTGGGTGGAGTTCAAGAAG 1000
W E F K Q G S V K N W V E F K K
1001 ----+----*----+----*----+----*----+----*----+----* 1050
E F L Q Y S E G T L S R E A I Q R
msp01005 845 GAGTTTCTGCAATACAGTGAGGGTACACTCTCCCGTGAAGCCATTCAGCG 894
||||| ||||| ||||| ||||| || || ||||| || ||||| |||||
ha06634 1001 GAGTTCCTGCAGTACAGCGAGGGCACGCTGTCCCGAGAGGCCATCCAGCG 1050
E F L Q Y S E G T L S R E A I Q R
1051 ----+----*----+----*----+----*----+----*----+----* 1100
E L E L P Q K Q G E P L D Q F L W
msp01005 895 GGAGCTGGAGCTGCCGCAGAAGCAGGGTGAACCACTCGACCAGTTCCTCT 944
||||||||| ||||||||||||||||| || || || ||||||||||| |
ha06634 1051 GGAGCTGGACCTGCCGCAGAAGCAGGGCGAGCCGCTGGACCAGTTCCTGT 1100
E L D L P Q K Q G E P L D Q F L W
1101 ----+----*----+----*----+----*----+----*----+----* 1150
R K R D L Y Q T L Y V D A E E E
msp01005 945 GGCGCAAGCGGGACCTGTACCAGACACTGTATGTGGACGCTGAGGAGGAG 994
||||||||||||||||||||||||| || || |||||||| || ||||||
ha06634 1101 GGCGCAAGCGGGACCTGTACCAGACGCTCTACGTGGACGCGGACGAGGAG 1150
R K R D L Y Q T L Y V D A D E E
1151 ----+----*----+----*----+----*----+----*----+----* 1200
E I I Q Y V V G T L Q P K L K R F
msp01005 995 GAGATCATTCAGTATGTGGTGGGCACCCTGCAGCCCAAACTCAAGCGCTT 1044
|||||||| ||||| ||||||||||||||||||||||| |||||||| ||
ha06634 1151 GAGATCATCCAGTACGTGGTGGGCACCCTGCAGCCCAAGCTCAAGCGTTT 1200
E I I Q Y V V G T L Q P K L K R F
1201 ----+----*----+----*----+----*----+----*----+----* 1250
L R H P L P K T L E Q L I Q R G M
msp01005 1045 TCTGCGCCACCCACTCCCCAAGACCCTGGAGCAGCTTATCCAGAGGGGTA 1094
||||||||||| || |||||||||||||||||||| ||||||||||| |
ha06634 1201 CCTGCGCCACCCCCTGCCCAAGACCCTGGAGCAGCTCATCCAGAGGGGCA 1250
L R H P L P K T L E Q L I Q R G M
1251 ----+----*----+----*----+----*----+----*----+----* 1300
E V Q D G L E Q A A E P S G T P
msp01005 1095 TGGAAGTGCAGGACGGCCTGGAGCAGGCAGCTGAGCCTTCTGGCACCCCA 1144
|||| |||||||| | |||||||||||| || ||||| | ||| |||
ha06634 1251 TGGAGGTGCAGGATGACCTGGAGCAGGCGGCCGAGCCGGCCGGCCCCCAC 1300
E V Q D D L E Q A A E P A G P H
1301 ----+----*----+----*----+----*----+----*----+----* 1350
L P T E D E T E A L T P A L T S E
msp01005 1145 CTGCCCACAGAGGATGAGACGGAGGCACTCACACCTGCTCTTACCAGCGA 1194
|| || ||||||||| ||||| | ||||| || || | | ||||||
ha06634 1301 CTCCCGGTGGAGGATGAGGCGGAGACCCTCACGCCCGCCCCCAACAGCGA 1350
L P V E D E A E T L T P A P N S E
1351 ----+----*----+----*----+----*----+----*----+----* 1400
S V A S D R T Q P E *
msp01005 1195 GTCAGTAGCCAGTGACAGGACCCAGCCTGAATAGAGGGGCCAGCCCAGGG 1244
||| || ||||||||| |||||||||| || ||||||| || ||| | |
ha06634 1351 GTCCGTGGCCAGTGACCGGACCCAGCCCGAGTAGAGGG..CATCCCGGAG 1398
S V A S D R T Q P E *
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msp01005 1245 TCCCCAGCCCGCCTGCCACACCCAGCCTGTGGCTTTTGCCAACTAGGAC. 1293
|||||||| ||| | ||| |||||||||||| |||||| || |||||
ha06634 1399 CCCCCAGCCTGCCCACTACATCCAGCCTGTGGC.TTTGCCCACCAGGACT 1447
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msp01005 1294 .TTGAGCTGGGGC..................................... 1305
||||||||||||
ha06634 1448 TTTGAGCTGGGGCTGACTCCTGCAGGGGAAGCCCTGGTCCAGCTGGGTGC 1497
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msp01005 1306 .................................................. 1306
ha06634 1498 CCCCTCGAGCTCCGGGCGGACTCGCACACACTCGTGTCATCCAGATGTGA 1547
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msp01005 1306 .................................................. 1306
ha06634 1548 GCACCGCACCCAGCGGCAAAGAGCCCTCCCCCCTGCAGGGCTCCACCCAT 1597
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msp01005 1306 .................................................. 1306
ha06634 1598 CACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACACTCT 1647
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msp01005 1306 .................................................. 1306
ha06634 1648 CAGGCCATCACAGAACACCCCAGCTTCCTCATTCTGCTACAACACCCAGG 1697
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msp01005 1306 .................................................. 1306
ha06634 1698 CCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGC 1747
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msp01005 1306 .................................................. 1306
ha06634 1748 CACCAAGCTCATGGGACACCCAGAGCAGAAGCTAGGGCAGAGCCAATGCT 1797
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msp01005 1306 .................................................. 1306
ha06634 1798 GAGGGAGCCTCGACTTCCGGCGCCGCCGCCCTCTCCCGGCATCCGCAGAG 1847
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msp01005 1306 .................................................. 1306
ha06634 1848 CCAGCTGACGCCCTCCCTGCCTCCCAGGGCAGCTGGCCAGCCTCGGGCAG 1897
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msp01005 1306 .................................................. 1306
ha06634 1898 CGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGC 1947
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msp01005 1306 .................................................. 1306
ha06634 1948 AGACCTGATGTCCCGGTGCTTCCTGGCCCCTCAGCTCCAGTGATTCACGC 1997
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msp01005 1306 .................................................. 1306
ha06634 1998 CCGCCTGGAGAAGAATCAGAGCTCAGCTCATGACTCACCCATGGCAGGCG 2047
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msp01005 1306 .................................................. 1306
ha06634 2048 GAGGGTCCCAGAGGGGCTGAGTCCTCAAATCCGGCTGAGGCAGCAGCTGG 2097
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msp01005 1306 .................................................. 1306
ha06634 2098 CACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTTCCCACAAAGT 2147
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msp01005 1306 .................................................. 1306
ha06634 2148 CTTTGCTGCTGTGCTGGGCACCACCCACCCCTCACCTTGCAGGCTGCCTG 2197
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msp01005 1306 .................................................. 1306
ha06634 2198 CGTGGGAGGCGAAGTCCCAGGACAGCCCAGAGGGGGGCTACAGAGAGGAG 2247
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msp01005 1306 .................................................. 1306
ha06634 2248 TCGGCTGCAGCAGAGGGCAGGAGCCCCAGCTTAGCCCTGAGCGCCAGCGC 2297
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msp01005 1306 .................................................. 1306
ha06634 2298 GAGGACCAGGGCCTGCCACTAAGCCCGCCCCGCTGGCCGCCAGCTGCCCG 2347
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msp01005 1306 .................................................. 1306
ha06634 2348 TCCCCAGAGCCACTGCAGCAGGAGTCGGGCCCTGCCTCCCTCCCAGCAGG 2397
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msp01005 1306 .................................................. 1306
ha06634 2398 GAAACCCCGCCCGCTGCCAGGCCATCCTCTCTGCCAGAGGCTTTCATGAG 2447
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msp01005 1306 .................................................. 1306
ha06634 2448 CCCCAAGGCTGGGGCCACAGCTCCTACCCCTGCCCAGCAGCCCTGAGCTC 2497
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msp01005 1306 .................................................. 1306
ha06634 2498 AGCTGCAGGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGG 2547
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msp01005 1306 .................................................. 1306
ha06634 2548 CATTCTGCCCTGCCCCAACACCAGAACCCTGGTGCTGGTGGGCCACTAGC 2597
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msp01005 1306 .................................................. 1306
ha06634 2598 GTCTGCAGCCTAAGCAGGTGCTGGCTCAGGGTTCATCGTTCTGCCTTGTC 2647
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msp01005 1306 .................................................. 1306
ha06634 2648 CACTGGGGGACCAGCCCTGCAGACCACTCTGACAAGTCTTCAGCCCACAC 2697
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msp01005 1306 .................................................. 1306
ha06634 2698 CCTGCCAGCCCCACAGATTTTATTTTTGCACATAAGCCATAACCAATCCT 2747
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msp01005 1306 .................................................. 1306
ha06634 2748 CAAGGCTGGCACAGGCTTTGGGGAAGCCCTGGAGCCTGTGAAGACCCTGG 2797
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msp01005 1306 .................................................. 1306
ha06634 2798 AAACCTCATGAGGCTGTGGCCAACCCCTGCCCCTTGCCCCACACAGACCA 2847
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msp01005 1306 .................................................. 1306
ha06634 2848 GGCCTTAAATGTCGGTCCAGGCCCTGTGCACCTTACCCCAGAGACAGACT 2897
2901 ----+----*----+----*----+----*----+--- 2938
msp01005 1306 ...................................... 1306
ha06634 2898 CTTTTTGTAAGATTTTGTTAATAAAACACTGAAACTTC 2935