FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00204.ptfa, 618 aa vs ./tmplib.26680 library 1768399 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 9.3595+/-0.00782; mu= -4.9894+/- 0.519 mean_var=347.9762+/-82.967, 0's: 0 Z-trim: 5 B-trim: 0 in 0/36 Lambda= 0.0688 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1494 ( 914 res) mpm09319 ( 914) 679 81 3.7e-16 mKIAA1296 ( 1304 res) mfj01232 (1304) 247 39 0.0037 >>mKIAA1494 ( 914 res) mpm09319 (914 aa) initn: 1495 init1: 389 opt: 679 Z-score: 382.5 bits: 81.5 E(): 3.7e-16 Smith-Waterman score: 1523; 43.811% identity (54.124% ungapped) in 719 aa overlap (1-617:230-913) 10 20 30 mFLJ00 EMKDRDQDKDCLTFTKDEVLTVIRRVDDNW :.::.. ::::: :.::.:::::::::.:: mKIAA1 GVHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENW 200 210 220 230 240 250 40 50 60 70 80 90 mFLJ00 AEGMLGDKIGIFPLLYVELNDSAKQLIEMDKLCPAATTAYNYDALLSSDPSTVASVAPGP :::::.:::::::. :::.:..:::::: :: : . :.. .. :. mKIAA1 AEGMLADKIGIFPISYVEFNSAAKQLIEWDK--PPV-------------PGVDTAECPSA 260 270 280 290 300 100 110 120 130 140 150 mFLJ00 TLSSSGAVSAFQRRVDSKKNAKKRHSFTALSVTHKSSQAASHRHSMEISAPVLISSSDPR : .:..: ... :.:::..::::::.:....::::....::::::: :::::::.: mKIAA1 TAQSTSA----SKHPDTKKNTRKRHSFTSLTMANKSSQGSQNRHSMEISPPVLISSSNPT 310 320 330 340 350 360 160 170 180 mFLJ00 AAARIGELAHLSCTVPTQ-------------DSS--SAGPV---PTALPR---------- :::::.::. :::..:.: :: ..::. :. .: mKIAA1 AAARISELSGLSCSAPSQVHISTTGLIVTPPPSSPVTTGPAFTFPSDVPYQAALGSMNPP 370 380 390 400 410 420 190 200 mFLJ00 -------------------------AAAVAGEQGMSPKV-------------QLPLNVYL :::.:. ::.:. : .::. mKIAA1 LPPPPLLAATVLASTPSGATAAVAAAAAAAAAAGMGPRPVMGSSEQIAHLRPQTRPSVYV 430 440 450 460 470 480 210 220 230 240 250 mFLJ00 ALYAYKPQKNDELELRKGEMYRVLEKCQDGWFKGASLKTGVSGVFPGNYVTPVSR----- :.: : :.:.::::::::::. :.:.:::::.::.:..:. ::::::::.::.: mKIAA1 AIYPYTPRKEDELELRKGEMFLVFERCQDGWYKGTSMHTSKIGVFPGNYVAPVTRAVTNA 490 500 510 520 530 540 260 270 280 290 300 310 mFLJ00 ----VPGGGAGLPWNNVLGGSPLAKGMATIMHPGGGSLSSPATAARSALPLTTLQDHMQH : . :: .: :: . : : :.: ..: :..: .... : mKIAA1 SQAKVSMSTAGQASRGVTMVSPSTAGGPTQKPQGNGVAGNP-----SVVPTAVVS--AAH 550 560 570 580 590 320 330 340 350 360 370 mFLJ00 PATSLPTGSCLRH-SAQPTASQAGDTTIPTATHASAQALDRPTATVSPLRTQTSPSRLP- :: : .. : : :.: :..:: ... .:.:.. .::::.:.:...:.. : mKIAA1 IQTS-PQAKVLLHMSGQMTVNQARNAVRTVAAHSQ----ERPTAAVTPIQVQNAACLGPA 600 610 620 630 640 380 390 400 410 420 mFLJ00 STGLRPRSVAS-PQHGQQSPAQM-----CPRPAIPFTSAASA-ITPPNVSAANLSGEVGG :.:: .:.:: : . .:: : :.. ::.: .. ::...: : : .: mKIAA1 SVGLPHHSLASQPLPPMAGPAAHGAAVSISRTNAPMACAAGASLASPNMTSAMLETEPSG 650 660 670 680 690 700 430 440 450 460 470 mFLJ00 TPIS---GL-STPSLI------NTGFKPDDKKNEKKEKKSGLLKLLAGASTKKKSRSPPS .. :: ..: ... ::: :. ::::: ::::::.:::::.: : : mKIAA1 RTVTILPGLPTSPESAASACGNSSAGKPD--KDSKKEKK-GLLKLLSGASTKRKPRVSPP 710 720 730 740 750 760 480 490 500 510 520 mFLJ00 VSPTHDPQ-SAMDTSLQGAMGPEVSPLT-VHGRAGSCPIESEMQGAIGLEPL-----HRK .::: : . .: .. ::::.:::. :: :::.:::: ... : : : ::: mKIAA1 ASPTLDVELGAGEAPLQGAVGPEL-PLGGSHGRVGSCPTDGDGPVAAGTAALAQDAFHRK 770 780 790 800 810 820 530 540 550 560 570 580 mFLJ00 AGSLDLNFSLSPS-RQATLSMASIRPEPKPLPRERYRVVVSYPPQSEAEIELKEGDIVFV ..::: ..: ::: :.. . : .:. ::.:::::::::::::.:::::::::: mKIAA1 TSSLDSAVPIAPPPRQACSSLGPVMNEARPVVCERHRVVVSYPPQSEAELELKEGDIVFV 830 840 850 860 870 880 590 600 610 mFLJ00 HKKHEDGWFKGTLQRNGRTGLFPGSFVESF :::.:::::::::::::.::::::::::.. mKIAA1 HKKREDGWFKGTLQRNGKTGLFPGSFVENI 890 900 910 >>mKIAA1296 ( 1304 res) mfj01232 (1304 aa) initn: 428 init1: 230 opt: 247 Z-score: 149.1 bits: 38.8 E(): 0.0037 Smith-Waterman score: 309; 30.000% identity (34.562% ungapped) in 250 aa overlap (12-257:1082-1302) 10 20 30 40 mFLJ00 EMKDRDQDKDCLTFTKDEVLTVIRRVDDNWAEGMLGDKIGI : . : .:. . :..:.:: :: ..:: mKIAA1 NIDDTAKRKSGLEMRPARAKFDFKAQTLKELPLQKGDVVYIYRQIDQNWYEGEHHGRVGI 1060 1070 1080 1090 1100 1110 50 60 70 80 90 mFLJ00 FPLLYVELNDSAKQLIEMDKLCPAATTAYNYDAL----LSSDPSTVASVAPGPTLSSSGA :: :.:: :.. . :: :. . :. .:. ...: .. : : .. mKIAA1 FPRTYIELLPPAEK-AQPRKLAPVQVLEYG-EAIAKFNFNGDTQVEMSFRKGERITLLRQ 1120 1130 1140 1150 1160 100 110 120 130 140 150 mFLJ00 VSAFQRRVDSKKNAKKRHSFTALSVTHKSSQAASHRHSMEISAPVLISSSDPRAAARIGE :. . ... . .:... .. . .. . :. : ::.: .: .. mKIAA1 VD--ENWYEGRIPGTSRQGIFPITYVDVLKRPLVKTPVDYIDLPY---SSSPSRSATVS- 1170 1180 1190 1200 1210 1220 160 170 180 190 200 210 mFLJ00 LAHLSCTVPTQDSSSAGPVPTALPRAAAVAGEQGMSPKVQLPLNVYLALYAYKPQKNDEL : : : : : .. : :. : : : :::.: ::..::: mKIAA1 --------PQQ--------PQAQQRRVTPDRSQ---PS--LDLCSYQALYSYVPQNDDEL 1230 1240 1250 1260 220 230 240 250 260 270 mFLJ00 ELRKGEMYRVLEKCQDGWFKGASLKTGVSGVFPGNYVTPVSRVPGGGAGLPWNNVLGGSP ::: :.. :.:::.:::: :.: .: :.:::::: :. mKIAA1 ELRDGDIVDVMEKCDDGWFVGTSRRTRQFGTFPGNYVKPLYL 1270 1280 1290 1300 280 290 300 310 320 330 mFLJ00 LAKGMATIMHPGGGSLSSPATAARSALPLTTLQDHMQHPATSLPTGSCLRHSAQPTASQA 618 residues in 1 query sequences 1768399 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:08:05 2006 done: Mon Mar 27 10:08:06 2006 Scan time: 0.820 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]