Comparison of KIAA cDNA sequences between mouse and human (KIAA1607)

<<Original sequence data>>

mouse  mKIAA1607 (msk09334)     length:   1437 bp, CDS:     1 -  1068
human   KIAA1607  (fj11118)     length:   4191 bp, CDS:     3 -  3815

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:        -           -        -          -
  CDS:   2748 -  3815     889      179      16.8
3'UTR:   3816 -  4219     215      136      38.7

amino acid

  CDS:   2748 -  3815     299       57      16.0
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
msk09334     1 .................................................. 1
                                                                 
fj11118      1 AGCGAGACTTCCAGTCCGAGGTCCTGCTTTCTGCTATGGAACTATTCCAC 50
                 R  D  F  Q  S  E  V  L  L  S  A  M  E  L  F  H  

            51 ----+----*----+----*----+----*----+----*----+----* 100
msk09334     1 .................................................. 1
                                                                 
fj11118     51 ATGACAAGTGGAGGTGATGCAGCGATGTTCAGAGACGGCAAAGAGCCTCA 100
               M  T  S  G  G  D  A  A  M  F  R  D  G  K  E  P  Q 

           101 ----+----*----+----*----+----*----+----*----+----* 150
msk09334     1 .................................................. 1
                                                                 
fj11118    101 GCCAAGTGCAGAAGCTGCTGCTGCCCCTTCTCTTGCCAACATCTCCTGCT 150
                P  S  A  E  A  A  A  A  P  S  L  A  N  I  S  C  F

           151 ----+----*----+----*----+----*----+----*----+----* 200
msk09334     1 .................................................. 1
                                                                 
fj11118    151 TCACCCAGAAGCTGGTGGAGAAGCTGTACAGTGGGATGTTCTCGGCAGAC 200
                 T  Q  K  L  V  E  K  L  Y  S  G  M  F  S  A  D  

           201 ----+----*----+----*----+----*----+----*----+----* 250
msk09334     1 .................................................. 1
                                                                 
fj11118    201 CCCAGGCATATCCTCCTCTTCATCCTGGAGCACATCATGGTGGTCATTGA 250
               P  R  H  I  L  L  F  I  L  E  H  I  M  V  V  I  E 

           251 ----+----*----+----*----+----*----+----*----+----* 300
msk09334     1 .................................................. 1
                                                                 
fj11118    251 GACTGCCTCTTCTCAAAGGGACACTGTCCTCAGCACTTTATACAGCAGTT 300
                T  A  S  S  Q  R  D  T  V  L  S  T  L  Y  S  S  L

           301 ----+----*----+----*----+----*----+----*----+----* 350
msk09334     1 .................................................. 1
                                                                 
fj11118    301 TAAATAAAGTCATTCTTTATTGCCTATCCAAGCCCCAGCAGTCCCTCTCC 350
                 N  K  V  I  L  Y  C  L  S  K  P  Q  Q  S  L  S  

           351 ----+----*----+----*----+----*----+----*----+----* 400
msk09334     1 .................................................. 1
                                                                 
fj11118    351 GAATGCCTCGGCCTTCTCAGCATCCTGGGCTTTCTGCAGGAGCACTGGGA 400
               E  C  L  G  L  L  S  I  L  G  F  L  Q  E  H  W  D 

           401 ----+----*----+----*----+----*----+----*----+----* 450
msk09334     1 .................................................. 1
                                                                 
fj11118    401 TGTTGTCTTTGCCACCTACAATTCCAACATCAGCTTCCTCCTGTGTCTCA 450
                V  V  F  A  T  Y  N  S  N  I  S  F  L  L  C  L  M

           451 ----+----*----+----*----+----*----+----*----+----* 500
msk09334     1 .................................................. 1
                                                                 
fj11118    451 TGCATTGCCTTTTGCTACTCAATGAGAGAAGTTACCCAGAAGGATTTGGA 500
                 H  C  L  L  L  L  N  E  R  S  Y  P  E  G  F  G  

           501 ----+----*----+----*----+----*----+----*----+----* 550
msk09334     1 .................................................. 1
                                                                 
fj11118    501 TTGGAGCCCAAGCCTAGAATGTCTACTTATCATCAAGTCTTCCTTTCCCC 550
               L  E  P  K  P  R  M  S  T  Y  H  Q  V  F  L  S  P 

           551 ----+----*----+----*----+----*----+----*----+----* 600
msk09334     1 .................................................. 1
                                                                 
fj11118    551 AAATGAAGACGTGAAAGAAAAAAGAGAAGACTTACCAAGTTTGAGTGATG 600
                N  E  D  V  K  E  K  R  E  D  L  P  S  L  S  D  V

           601 ----+----*----+----*----+----*----+----*----+----* 650
msk09334     1 .................................................. 1
                                                                 
fj11118    601 TCCAACACAACATCCAGAAGACAGTGCAGACTCTCTGGCAGCAGCTGGTG 650
                 Q  H  N  I  Q  K  T  V  Q  T  L  W  Q  Q  L  V  

           651 ----+----*----+----*----+----*----+----*----+----* 700
msk09334     1 .................................................. 1
                                                                 
fj11118    651 GCACAAAGGCAGCAGACCCTGGAGGATGCCTTCAAGATCGATCTCTCTGT 700
               A  Q  R  Q  Q  T  L  E  D  A  F  K  I  D  L  S  V 

           701 ----+----*----+----*----+----*----+----*----+----* 750
msk09334     1 .................................................. 1
                                                                 
fj11118    701 GAAACCTGGAGAGAGGGAAGTGAAGATTGAAGAGGTCACACCGCTCTGGG 750
                K  P  G  E  R  E  V  K  I  E  E  V  T  P  L  W  E

           751 ----+----*----+----*----+----*----+----*----+----* 800
msk09334     1 .................................................. 1
                                                                 
fj11118    751 AGGAGACGATGCTCAAGGCCTGGCAGCATTACTTAGCATCTGAGAAGAAG 800
                 E  T  M  L  K  A  W  Q  H  Y  L  A  S  E  K  K  

           801 ----+----*----+----*----+----*----+----*----+----* 850
msk09334     1 .................................................. 1
                                                                 
fj11118    801 TCACTGGCAAGTCGTTCAAATGTTGCACACCACAGCAAAGTCACTTTGTG 850
               S  L  A  S  R  S  N  V  A  H  H  S  K  V  T  L  W 

           851 ----+----*----+----*----+----*----+----*----+----* 900
msk09334     1 .................................................. 1
                                                                 
fj11118    851 GAGTGGAAGCCTGTCCTCAGCCATGAAGCTGATGCCCGGGCGGCAGGCCA 900
                S  G  S  L  S  S  A  M  K  L  M  P  G  R  Q  A  K

           901 ----+----*----+----*----+----*----+----*----+----* 950
msk09334     1 .................................................. 1
                                                                 
fj11118    901 AGGACCCTGAGTGCAAGACAGAGGATTTTGTGTCATGTATAGAGAACTAC 950
                 D  P  E  C  K  T  E  D  F  V  S  C  I  E  N  Y  

           951 ----+----*----+----*----+----*----+----*----+----* 1000
msk09334     1 .................................................. 1
                                                                 
fj11118    951 AGAAGAAGAGGACAAGAGCTATATGCATCTTTATACAAAGACCATGTGCA 1000
               R  R  R  G  Q  E  L  Y  A  S  L  Y  K  D  H  V  Q 

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
msk09334     1 .................................................. 1
                                                                 
fj11118   1001 AAGGCGAAAATGTGGCAACATCAAGGCAGCCAACGCCTGGGCCAGGATCC 1050
                R  R  K  C  G  N  I  K  A  A  N  A  W  A  R  I  Q

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
msk09334     1 .................................................. 1
                                                                 
fj11118   1051 AGGAGCAGCTTTTTGGGGAGCTGGGCTTGTGGAGCCAGGGGGAAGAAACC 1100
                 E  Q  L  F  G  E  L  G  L  W  S  Q  G  E  E  T  

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
msk09334     1 .................................................. 1
                                                                 
fj11118   1101 AAGCCCTGTTCCCCATGGGAACTCGACTGGAGAGAAGGACCAGCTCGAAT 1150
               K  P  C  S  P  W  E  L  D  W  R  E  G  P  A  R  M 

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
msk09334     1 .................................................. 1
                                                                 
fj11118   1151 GAGGAAACGCATCAAACGCTTGTCTCCTTTGGAGGCCCTGAGCTCAGGAA 1200
                R  K  R  I  K  R  L  S  P  L  E  A  L  S  S  G  R

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
msk09334     1 .................................................. 1
                                                                 
fj11118   1201 GGCACAAGGAAAGCCAAGACAAAAATGATCATATTTCTCAAACAAATGCT 1250
                 H  K  E  S  Q  D  K  N  D  H  I  S  Q  T  N  A  

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
msk09334     1 .................................................. 1
                                                                 
fj11118   1251 GAAAACCAAGATGAACTGACACTGAGGGAGGCTGAGGGCGAGCCGGACGA 1300
               E  N  Q  D  E  L  T  L  R  E  A  E  G  E  P  D  E 

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
msk09334     1 .................................................. 1
                                                                 
fj11118   1301 GGTGGGGGTGGACTGCACCCAGCTGACCTTCTTCCCAGCCTTACACGAAA 1350
                V  G  V  D  C  T  Q  L  T  F  F  P  A  L  H  E  S

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
msk09334     1 .................................................. 1
                                                                 
fj11118   1351 GTCTGCACTCAGAAGACTTCTTGGAACTGTGTCGGGAAAGACAAGTTATT 1400
                 L  H  S  E  D  F  L  E  L  C  R  E  R  Q  V  I  

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
msk09334     1 .................................................. 1
                                                                 
fj11118   1401 TTACAAGAGCTTCTTGATAAAGAAAAGGTGACGCAGAAGTTCTCCCTGGT 1450
               L  Q  E  L  L  D  K  E  K  V  T  Q  K  F  S  L  V 

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
msk09334     1 .................................................. 1
                                                                 
fj11118   1451 GATTGTGCAGGGCCACCTGGTGTCAGAAGGGGTCCTGCTTTTTGGCCACC 1500
                I  V  Q  G  H  L  V  S  E  G  V  L  L  F  G  H  Q

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
msk09334     1 .................................................. 1
                                                                 
fj11118   1501 AACACTTCTACATCTGCGAGAACTTCACACTGTCTCCCACGGGTGATGTC 1550
                 H  F  Y  I  C  E  N  F  T  L  S  P  T  G  D  V  

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
msk09334     1 .................................................. 1
                                                                 
fj11118   1551 TACTGTACCCGTCACTGCTTATCCAACATCAGCGATCCGTTCATTTTCAA 1600
               Y  C  T  R  H  C  L  S  N  I  S  D  P  F  I  F  N 

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
msk09334     1 .................................................. 1
                                                                 
fj11118   1601 CCTGTGCAGCAAAGACAGGTCCACTGACCATTACTCGTGCCAGTGCCACA 1650
                L  C  S  K  D  R  S  T  D  H  Y  S  C  Q  C  H  S

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
msk09334     1 .................................................. 1
                                                                 
fj11118   1651 GCTACGCTGACATGCGGGAGCTACGGCAGGCTCGCTTCCTCCTGCAGGAC 1700
                 Y  A  D  M  R  E  L  R  Q  A  R  F  L  L  Q  D  

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
msk09334     1 .................................................. 1
                                                                 
fj11118   1701 ATCGCCCTGGAGATCTTCTTCCACAATGGATATTCCAAGTTTCTTGTCTT 1750
               I  A  L  E  I  F  F  H  N  G  Y  S  K  F  L  V  F 

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
msk09334     1 .................................................. 1
                                                                 
fj11118   1751 CTACAACAATGATCGGAGTAAGGCCTTTAAAAGCTTCTGCTCTTTCCAAC 1800
                Y  N  N  D  R  S  K  A  F  K  S  F  C  S  F  Q  P

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
msk09334     1 .................................................. 1
                                                                 
fj11118   1801 CCAGCCTGAAGGGGAAAGCCACCTCGGAGGACACCCTCAATCTAAGGAGA 1850
                 S  L  K  G  K  A  T  S  E  D  T  L  N  L  R  R  

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
msk09334     1 .................................................. 1
                                                                 
fj11118   1851 TACCCCGGCTCTGACAGGATCATGCTGCAGAAGTGGCAGAAAAGGGACAT 1900
               Y  P  G  S  D  R  I  M  L  Q  K  W  Q  K  R  D  I 

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
msk09334     1 .................................................. 1
                                                                 
fj11118   1901 CAGCAATTTTGAGTATCTCATGTACCTCAACACCGCGGCTGGGAGAACCT 1950
                S  N  F  E  Y  L  M  Y  L  N  T  A  A  G  R  T  C

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
msk09334     1 .................................................. 1
                                                                 
fj11118   1951 GCAATGACTACATGCAGTACCCAGTGTTCCCCTGGGTCCTCGCAGACTAC 2000
                 N  D  Y  M  Q  Y  P  V  F  P  W  V  L  A  D  Y  

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
msk09334     1 .................................................. 1
                                                                 
fj11118   2001 ACCTCAGAGACATTGAACTTGGCAAATCCGAAGATTTTCCGGGATCTTTC 2050
               T  S  E  T  L  N  L  A  N  P  K  I  F  R  D  L  S 

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
msk09334     1 .................................................. 1
                                                                 
fj11118   2051 AAAGCCCATGGGGGCTCAGACCAAGGAAAGGAAGCTGAAATTTATCCAGA 2100
                K  P  M  G  A  Q  T  K  E  R  K  L  K  F  I  Q  R

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
msk09334     1 .................................................. 1
                                                                 
fj11118   2101 GGTTTAAAGAAGTTGAGAAAACTGAAGGAGACATGACTGTCCAGTGCCAC 2150
                 F  K  E  V  E  K  T  E  G  D  M  T  V  Q  C  H  

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
msk09334     1 .................................................. 1
                                                                 
fj11118   2151 TACTACACCCACTACTCCTCGGCCATCATCGTGGCCTCCTACCTGGTCCG 2200
               Y  Y  T  H  Y  S  S  A  I  I  V  A  S  Y  L  V  R 

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
msk09334     1 .................................................. 1
                                                                 
fj11118   2201 GATGCCACCCTTCACCCAGGCCTTCTGCGCTCTGCAGGGCGGAAGCTTCG 2250
                M  P  P  F  T  Q  A  F  C  A  L  Q  G  G  S  F  D

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
msk09334     1 .................................................. 1
                                                                 
fj11118   2251 ACGTGGCAGACAGAATGTTCCACAGTGTGAAGAGCACGTGGGAGTCGGCC 2300
                 V  A  D  R  M  F  H  S  V  K  S  T  W  E  S  A  

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
msk09334     1 .................................................. 1
                                                                 
fj11118   2301 TCCAGAGAGAACATGAGTGACGTCAGGGAGCTGACCCCAGAGTTCTTCTA 2350
               S  R  E  N  M  S  D  V  R  E  L  T  P  E  F  F  Y 

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
msk09334     1 .................................................. 1
                                                                 
fj11118   2351 CCTGCCTGAGTTCTTAACCAACTGCAACGGGGTAGAGTTCGGCTGCATGC 2400
                L  P  E  F  L  T  N  C  N  G  V  E  F  G  C  M  Q

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
msk09334     1 .................................................. 1
                                                                 
fj11118   2401 AGGACGGGACTGTGCTAGGAGACGTGCAGCTCCCTCCCTGGGCTGATGGG 2450
                 D  G  T  V  L  G  D  V  Q  L  P  P  W  A  D  G  

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
msk09334     1 .................................................. 1
                                                                 
fj11118   2451 GACCCTCGGAAATTCATCAGCCTGCACAGAAAGGCCCTGGAAAGTGACTT 2500
               D  P  R  K  F  I  S  L  H  R  K  A  L  E  S  D  F 

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
msk09334     1 .................................................. 1
                                                                 
fj11118   2501 TGTCAGTGCCAACCTCCACCATTGGATAGACCTTATTTTTGGGTACAAGC 2550
                V  S  A  N  L  H  H  W  I  D  L  I  F  G  Y  K  Q

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
msk09334     1 .................................................. 1
                                                                 
fj11118   2551 AGCAGGGGCCAGCCGCAGTGGATGCTGTTAATATCTTCCACCCCTACTTC 2600
                 Q  G  P  A  A  V  D  A  V  N  I  F  H  P  Y  F  

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
msk09334     1 .................................................. 1
                                                                 
fj11118   2601 TACGGTGACAGAATGGACCTCAGCAGCATCACTGACCCCCTCATCAAAAG 2650
               Y  G  D  R  M  D  L  S  S  I  T  D  P  L  I  K  S 

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
msk09334     1 .................................................. 1
                                                                 
fj11118   2651 CACCATCCTGGGGTTTGTCAGCAACTTTGGACAGGTGCCCAAACAGCTCT 2700
                T  I  L  G  F  V  S  N  F  G  Q  V  P  K  Q  L  F

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
                                                              G  
msk09334     1 ...............................................GGA 3
                                                              |||
fj11118   2701 TTACCAAACCTCACCCAGCCAGGACTGCAGCAGGGAAGCCTCTGCCTGGA 2750
                 T  K  P  H  P  A  R  T  A  A  G  K  P  L  P  G  

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
               K  D  A  S  T  P  V  G  L  P  G  H  S  Q  S  F  L 
msk09334     4 AAGGATGCTTCCACCCCTGTAGGCCTCCCAGGCCACTCACAGTCCTTCCT 53
               |||||||  |||||||| ||  |||| || |||||| ||||| ||||  |
fj11118   2751 AAGGATGTCTCCACCCCCGTGAGCCTGCCTGGCCACCCACAGCCCTTTTT 2800
               K  D  V  S  T  P  V  S  L  P  G  H  P  Q  P  F  F 

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
                H  S  L  P  A  L  R  P  S  Q  V  T  V  K  D  M  Y
msk09334    54 CCACAGCCTGCCAGCACTGAGACCCTCTCAGGTCACAGTCAAAGATATGT 103
               | |||||||||   | ||||| ||||| |||||||| |||||||||||||
fj11118   2801 CTACAGCCTGCAGTCGCTGAGGCCCTCCCAGGTCACGGTCAAAGATATGT 2850
                Y  S  L  Q  S  L  R  P  S  Q  V  T  V  K  D  M  Y

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
                 L  F  S  L  G  S  E  S  P  K  G  A  I  G  H  I  
msk09334   104 ACCTTTTCTCTCTAGGGTCGGAATCCCCCAAAGGGGCCATCGGCCACATC 153
               |||| || |||||||| || || ||||||||||||||||| |||||||| 
fj11118   2851 ACCTCTTTTCTCTAGGCTCAGAGTCCCCCAAAGGGGCCATTGGCCACATT 2900
                 L  F  S  L  G  S  E  S  P  K  G  A  I  G  H  I  

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
               V  P  T  E  K  S  I  L  A  V  E  K  N  K  L  L  M 
msk09334   154 GTCCCTACTGAGAAGTCAATCCTGGCGGTGGAGAAGAACAAACTGCTGAT 203
               ||| ||||||||||| | || ||||| || |||| ||||||| ||||| |
fj11118   2901 GTCTCTACTGAGAAGACCATTCTGGCTGTAGAGAGGAACAAAGTGCTGCT 2950
               V  S  T  E  K  T  I  L  A  V  E  R  N  K  V  L  L 

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
                P  P  L  W  N  R  T  F  S  W  G  F  D  D  F  S  C
msk09334   204 GCCCCCTCTCTGGAACAGGACCTTCAGCTGGGGCTTTGATGACTTCAGTT 253
               ||| |||||||||||||||||||||||||||||||||||||||||||| |
fj11118   2951 GCCTCCTCTCTGGAACAGGACCTTCAGCTGGGGCTTTGATGACTTCAGCT 3000
                P  P  L  W  N  R  T  F  S  W  G  F  D  D  F  S  C

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
                 C  L  G  S  Y  G  S  D  K  I  L  M  T  F  E  N  
msk09334   254 GCTGCCTGGGGAGCTACGGCTCTGACAAGATCCTGATGACCTTTGAGAAC 303
               ||||| |||||||||||||||| |||||| |||||||||| || ||||||
fj11118   3001 GCTGCTTGGGGAGCTACGGCTCCGACAAGGTCCTGATGACATTCGAGAAC 3050
                 C  L  G  S  Y  G  S  D  K  V  L  M  T  F  E  N  

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
               L  A  A  W  G  P  C  L  C  A  V  C  P  S  P  T  M 
msk09334   304 CTGGCTGCCTGGGGTCCCTGTCTGTGCGCTGTATGCCCCTCCCCCACGAT 353
               |||||||||||||| | |||||||||||| || ||||| ||||| || | 
fj11118   3051 CTGGCTGCCTGGGGCCGCTGTCTGTGCGCCGTGTGCCCATCCCCAACAAC 3100
               L  A  A  W  G  R  C  L  C  A  V  C  P  S  P  T  T 

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
                I  V  T  S  G  A  S  A  V  V  C  I  W  E  L  S  L
msk09334   354 GATCGTCACATCCGGGGCCAGCGCAGTGGTGTGCATCTGGGAGCTGAGCC 403
               ||| ||||| || ||| ||||| | ||||||||  | |||||||| ||| 
fj11118   3101 GATTGTCACCTCTGGGACCAGCACTGTGGTGTGTGTGTGGGAGCTCAGCA 3150
                I  V  T  S  G  T  S  T  V  V  C  V  W  E  L  S  M

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
                 V  K  G  R  P  R  G  L  K  L  R  Q  A  L  Y  G  
msk09334   404 TGGTCAAAGGTCGCCCGAGAGGTCTGAAACTCCGACAGGCCTTGTATGGA 453
               ||  |||||| |||||||| ||  ||   ||||| |||||||||||||||
fj11118   3151 TGACCAAAGGCCGCCCGAGGGGCTTGCGCCTCCGGCAGGCCTTGTATGGA 3200
                 T  K  G  R  P  R  G  L  R  L  R  Q  A  L  Y  G  

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
               H  T  Q  A  V  T  C  L  T  A  S  V  T  F  S  L  L 
msk09334   454 CACACTCAGGCGGTCACATGTCTGACAGCCTCTGTCACCTTCAGCCTCCT 503
               ||||| ||||| ||||| || ||| |||| || |||||||||||||||||
fj11118   3201 CACACACAGGCTGTCACGTGCCTGGCAGCGTCAGTCACCTTCAGCCTCCT 3250
               H  T  Q  A  V  T  C  L  A  A  S  V  T  F  S  L  L 

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
                V  S  G  S  Q  D  R  T  C  I  L  W  D  L  D  H  L
msk09334   504 GGTGAGCGGATCCCAGGATCGCACTTGTATCCTGTGGGACCTGGACCACC 553
               ||||||||| ||||||||  |||| |||||||||||||| ||||||||||
fj11118   3251 GGTGAGCGGCTCCCAGGACTGCACCTGTATCCTGTGGGATCTGGACCACC 3300
                V  S  G  S  Q  D  C  T  C  I  L  W  D  L  D  H  L

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
                 S  R  V  A  C  L  P  V  H  R  E  G  I  S  A  I  
msk09334   554 TCTCTCGTGTGGCCTGCCTGCCTGTCCACCGGGAAGGCATCTCAGCCATT 603
               || | |  ||| || ||||||| | ||| |||||||||||||||||||| 
fj11118   3301 TCACCCACGTGACCCGCCTGCCCGCCCATCGGGAAGGCATCTCAGCCATC 3350
                 T  H  V  T  R  L  P  A  H  R  E  G  I  S  A  I  

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
               A  I  S  D  V  S  G  T  I  V  S  C  A  G  A  H  L 
msk09334   604 GCCATCAGTGATGTCTCGGGAACCATTGTCTCCTGTGCCGGAGCCCACTT 653
                |||||||||| ||||| || ||||||||||||||||| ||||| |||||
fj11118   3351 ACCATCAGTGACGTCTCAGGCACCATTGTCTCCTGTGCGGGAGCACACTT 3400
               T  I  S  D  V  S  G  T  I  V  S  C  A  G  A  H  L 

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
                S  L  W  N  V  N  G  Q  P  L  A  S  I  T  T  A  W
msk09334   654 GTCCCTGTGGAATGTCAATGGACAGCCCCTGGCCAGTATTACCACAGCCT 703
               |||||||||||||||||||||||||||||||||||| || ||||||||||
fj11118   3401 GTCCCTGTGGAATGTCAATGGACAGCCCCTGGCCAGCATCACCACAGCCT 3450
                S  L  W  N  V  N  G  Q  P  L  A  S  I  T  T  A  W

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
                 G  P  E  G  T  I  T  C  C  C  I  V  E  G  P  A  
msk09334   704 GGGGCCCAGAAGGAACCATAACGTGCTGCTGCATAGTAGAGGGGCCAGCG 753
               |||||||||||||| ||||||| || |||||| |  | ||||| ||||| 
fj11118   3451 GGGGCCCAGAAGGAGCCATAACCTGTTGCTGCCTGATGGAGGGCCCAGCA 3500
                 G  P  E  G  A  I  T  C  C  C  L  M  E  G  P  A  

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
               W  D  A  S  H  V  I  I  T  G  S  K  D  G  M  V  R 
msk09334   754 TGGGATGCAAGCCACGTGATCATCACGGGGAGTAAGGACGGAATGGTTCG 803
               |||||  |||||||  | |||||||| |||||| | ||||| ||||| ||
fj11118   3501 TGGGACACAAGCCAGATCATCATCACCGGGAGTCAAGACGGCATGGTCCG 3550
               W  D  T  S  Q  I  I  I  T  G  S  Q  D  G  M  V  R 

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
                I  W  K  T  E  D  V  K  M  P  V  P  R  Q  A  V  M
msk09334   804 GATTTGGAAGACAGAGGACGTGAAGATGCCTGTTCCCAGGCAGGCAGTGA 853
               | |||||||||| ||||| ||||||||| |||||||  | | | |||   
fj11118   3551 GGTTTGGAAGACTGAGGATGTGAAGATGTCTGTTCCTGGACGGCCAGCAG 3600
                V  W  K  T  E  D  V  K  M  S  V  P  G  R  P  A  G

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
                 E  E  P  S  T  E  P  L  S  P  R  G  H  K  W  A  
msk09334   854 TGGAGGAGCCCTCCACGGAGCCCCTAAGCCCCAGAGGTCACAAGTGGGCC 903
                 |||||||||    |  |||| | |||||| ||||| ||||||||||  
fj11118   3601 GAGAGGAGCCCCTGGCTCAGCCTCCAAGCCCAAGAGGCCACAAGTGGGAG 3650
                 E  E  P  L  A  Q  P  P  S  P  R  G  H  K  W  E  

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
               K  N  L  A  L  S  R  E  L  D  V  S  V  A  L  S  G 
msk09334   904 AAGAATCTTGCCCTGAGCCGAGAGCTGGATGTCAGTGTTGCTCTGAGTGG 953
               ||||| || ||| |||| ||||||||||| || ||  ||||| |||  ||
fj11118   3651 AAGAACCTGGCCTTGAGTCGAGAGCTGGACGTTAGCATTGCTTTGACAGG 3700
               K  N  L  A  L  S  R  E  L  D  V  S  I  A  L  T  G 

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
                K  P  S  K  A  S  P  A  V  T  A  L  A  I  T  R  N
msk09334   954 CAAGCCCAGCAAGGCAAGTCCTGCTGTGACAGCTCTGGCCATCACTAGGA 1003
                |||||||||||  | || || || ||||| ||||||||| |  | || |
fj11118   3701 GAAGCCCAGCAAAACCAGCCCCGCAGTGACTGCTCTGGCCGTGTCCAGAA 3750
                K  P  S  K  T  S  P  A  V  T  A  L  A  V  S  R  N

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
                 Q  S  K  L  L  V  G  D  E  K  G  R  I  F  C  W  
msk09334  1004 ACCAGAGCAAGCTCTTGGTTGGCGATGAGAAGGGGCGAATCTTCTGCTGG 1053
               |||| | ||| ||| ||||||| ||||||| |||| |||| |||||||||
fj11118   3751 ACCACACCAAACTCCTGGTTGGTGATGAGAGGGGGAGAATATTCTGCTGG 3800
                 H  T  K  L  L  V  G  D  E  R  G  R  I  F  C  W  

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
               S  A  D  G  *                                     
msk09334  1054 TCTGCTGATGGGTAGGAGACAAGGAGCTGGAGGGACCGACCTGAAAGCCT 1103
               ||||| |||||||||||    ||  || | || |                
fj11118   3801 TCTGCAGATGGGTAGGAAGAGAGAGGCAGCAGAG................ 3834
               S  A  D  G  *                                     

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
msk09334  1104 GGAGCCCTGGGGTCGTCGGCAGCAACAGGCTACAGGCACAAGATG.GTGT 1152
                  || ||||      |  |||   ||||||   ||    ||| | |  |
fj11118   3835 ...GCTCTGGC....ACAACAGTGCCAGGCTGAGGGTGGCAGAGGTGACT 3877

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
msk09334  1153 GTAGCCTGGGCTGCTTAACCAGAGCAAGTTTTGGGGGGCTCCACTCCACA 1202
               |  ||||| |||       ||||  ||       ||| ||||  ||| ||
fj11118   3878 GGGGCCTGAGCTCTGCCTACAGAAGAAACCCCCAGGGCCTCC.TTCCCCA 3926

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
msk09334  1203 CAGTTCTCAAGGA...GTCCCTGATGATTTGCACCATGTACCCTAAACAT 1249
               |||||||||||||   | | |||   ||     |  || | || || | |
fj11118   3927 CAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCTGCAGCCCAACCCT 3976

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
msk09334  1250 GTCTGTAGTCTATGGGA.TTCTGTAAGAAGGATCTTGGTAGACACT.... 1294
                ||  | | | |||||| |||| | | ||||||      | |||||    
fj11118   3977 CTCCATGGCCGATGGGACTTCTATGAAAAGGATGAGCACACACACTCGGA 4026

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
msk09334  1295 ...........GATGCTGGAAACTG...............ATGCTGCATG 1318
                           | |||||||||||                 ||||||  
fj11118   4027 GGGCTGAGCAGCACGCTGGAAACTGTGACTTGGTGATGCCCAGCTGCACA 4076

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
msk09334  1319 GGAAATTTCTACGTGGCTCACTTCACCAAGGCTTATTGCACTGGGAAAAG 1368
                |||||| | || || ||||| | |  ||||  ||||||||||  |||| 
fj11118   4077 CGAAATTAC.ACATGACTCACCTTATTAAGGGCTATTGCACTGAAAAAAA 4125

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
msk09334  1369 AAGAGGGGGTGGGTATTGGTTCATGGAAACCACCCCACTGTCTTTATTTT 1418
               || |  |   ||   | | ||  ||||||  |    | ||||||||||||
fj11118   4126 AAAAAAGATGGG...TCGCTTACTGGAAATTATTGTATTGTCTTTATTTT 4172

          4201 ----+----*----+---- 4219
msk09334  1419 ATTAAAACTCCATTTTCCT 1437
               |||||| |  |  | |  |
fj11118   4173 ATTAAAGCAACTATGTTTT 4191