Comparison of KIAA cDNA sequences between mouse and human (FLJ00127)
<<Original sequence data>>
mouse mFLJ00127 (msk07274) length: 2066 bp, CDS: 2 - 1927
human (sh01274) length: 5859 bp, CDS: 45 - 935
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 14 - 57 20 24 54.5
CDS: 58 - 955 249 219 46.8
3'UTR: 956 - 5515 801 769 49.0
amino acid
CDS: 58 - 955 26 271 91.2
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msk07274 1 CGCGGGTGTACAGGTGCGGCCCACGCCTCCCTCGGCGCCTCAGCACCTTC 50
| ||| | | || | | | | | | | ||
sh01274 1 .............GAGCGTCTCCATCCCACTTTTGGGGATTCAGAGCATC 37
51 ----+----*----+----*----+----*----+----*----+----* 100
D A G R S E I G H N G G S K
msk07274 51 GGGGCGGGACGCGGGACGGTCTGAGATTGGTCACAATGGAGGC..AAGCA 98
|| | || || | || ||| | | | | || | |
sh01274 38 TTGGTGAAACCTCGGGGGCTCAGAGCTCCCACCTGAAGAAGCCCTCTTTA 87
N L G G S E L P P E E A L F I
101 ----+----*----+----*----+----*----+----*----+----* 150
Q M R V S R P Y K I S E S S
msk07274 99 AGCAGATGCGGGTATCCCGGCCATACAAAATCAGTGAGTCTTCA...... 142
||| ||| | | | ||| ||| || | | | | ||
sh01274 88 TTCAGGTGCAGTTCCCTTTCCCAAACATTCTCCGGGGTTGTGCATTCCGC 137
Q V Q F P F P N I L R G C A F R
151 ----+----*----+----*----+----*----+----*----+----* 200
msk07274 143 .................................................. 143
sh01274 138 AGACACATTTGGGAACCGCAGCGCCAGATGTTGATGCTGTCCCGGGTTCG 187
R H I W E P Q R Q M L M L S R V R
201 ----+----*----+----*----+----*----+----*----+----* 250
R C T T G L T T L L R C C M
msk07274 143 ...AAGGTGTACCACTGGCCTGACCACTCTACTGCGGTGCTGCAGCGGCT 189
|||| || || | | |||| || | | || || |
sh01274 188 GGGAAGGGAAGGTACAGGTATCTCAACTCCACAGGTGGCCTCCA.....T 232
G R E G T G I S T P Q V A S M
251 ----+----*----+----*----+----*----+----*----+----* 300
N E Q R L H G L F C D V V L
msk07274 190 GAACGAGCAGCGGCTG.........CACGGCCTCTTCTGCGACGTGGTGC 230
|||| ||| || || | | | | || ||| || ||
sh01274 233 GAACCAGCGCCGTGTGGATTTCTACCTTGCCTCCATCGAAGACATGCTGG 282
N Q R R V D F Y L A S I E D M L V
301 ----+----*----+----*----+----*----+----*----+----* 350
V V E E Q S A S P P Q P S -
msk07274 231 TGGTGGTCGAAGAGCAGCAAGTGCCAGCCCACCGCAACCTTCTG...... 274
||| ||| | | | | || | | | ||| |||| |
sh01274 283 TGGCCATCGGCGGCCGG..AATGAGAACGGAGCGCTCTCTTCAGTAGAGA 330
A I G G R N E N G A L S S V E T
351 ----+----*----+----*----+----*----+----*----+----* 400
msk07274 275 .................................................. 275
sh01274 331 CGTACAGTCCCAAGACTGACTCCTGGTCCTATGTGGCCGGCTTGCCAAGG 380
Y S P K T D S W S Y V A G L P R
401 ----+----*----+----*----+----*----+----*----+----* 450
A V C S D Y F N S M F T L
msk07274 275 ............GCTGTGTGCAGCGACTACTTCAACTCCATGTTCACACT 312
| | ||| | |||| ||| | ||| ||
sh01274 381 TTCACGTACGGCCACGCGGGCACCATCTACAAAGACTTCGTGTACATCTC 430
F T Y G H A G T I Y K D F V Y I S
451 ----+----*----+----*----+----*----+----*----+----* 500
G M R -
msk07274 313 GGGCATGCGCGA...................................... 324
||| | |||
sh01274 431 GGGGGGCCACGACTACCAAATTGGCCCCTACCGCAAGAACCTGCTATGCT 480
G G H D Y Q I G P Y R K N L L C Y
501 ----+----*----+----*----+----*----+----*----+----* 550
A F Q K E V E L V G -
msk07274 325 .............AGCTTTCCAGAAGGAGGTGGAGCTGGTGGGCAC.... 357
|| | | ||||| | || || |||
sh01274 481 ACGACCACCGGACAGACGTGTGGGAGGAGCGGCGGCCCATGACCACGGCG 530
D H R T D V W E E R R P M T T A
551 ----+----*----+----*----+----*----+----*----+----* 600
S Y V
msk07274 358 .........................................CTCCTACGT 366
|||| ||
sh01274 531 CGCGGCTGGCACAGCATGTCCAGCCTGGGTGACAGCATCTACTCCATCGG 580
R G W H S M S S L G D S I Y S I G
601 ----+----*----+----*----+----*----+----*----+----* 650
G L K A V V D F L Y S S - L E L
msk07274 367 GGGGCTCAAGGCCGTGGTAGATTTCCTCTACAGCAGCGA...GCTGGAGC 413
||| | | | | | || | | | | || ||| |||||
sh01274 581 GGGCAGCGATGACAACATCGAGTCCATGGAGCGCTTCGACGTGCTGGGCG 630
G S D D N I E S M E R F D V L G V
651 ----+----*----+----*----+----*----+----*----+----* 700
D G S N I D Y I L E - A H L
msk07274 414 TGGACGGCAGCAACATTGACTACATCCTGGAGAC......GGCGCATCTG 457
|||| | | || | | | || || | ||| ||||| |||
sh01274 631 TGGAGGCCTACAGCCCGCAGTGCAACCAGTGGACCCGCGTGGCGCCGCTG 680
E A Y S P Q C N Q W T R V A P L
701 ----+----*----+----*----+----*----+----*----+----* 750
L - I W
msk07274 458 CTGCA.......................................GATCTG 468
||||| ||||
sh01274 681 CTGCACGCCAACAGCGAGTCGGGCGTGGCAGTGTGGGAGGGCCGCATCTA 730
L H A N S E S G V A V W E G R I Y
751 ----+----*----+----*----+----*----+----*----+----* 800
T V V D F C C E Y
msk07274 469 GACCGTGGTGGATTTCTGCTGTGAGTAC...................... 496
| | ||| | | | |||| ||| ||
sh01274 731 CATCCTGGGCGGCTACAGCTGGGAGAACACTGCCTTCTCCAAGACCGTGC 780
I L G G Y S W E N T A F S K T V Q
801 ----+----*----+----*----+----*----+----*----+----* 850
msk07274 497 .................................................. 497
sh01274 781 AGGTGTACGACCGCGAGGCCGACAAGTGGAGCAGGGGCGTCGACCTGCCC 830
V Y D R E A D K W S R G V D L P
851 ----+----*----+----*----+----*----+----*----+----* 900
msk07274 497 .................................................. 497
sh01274 831 AAGGCCATCGCTGGCGGGTCCGCCTGTGTCTGCGCCCTGGAGCCACGGCC 880
K A I A G G S A C V C A L E P R P
901 ----+----*----+----*----+----*----+----*----+----* 950
L E Q E V S E
msk07274 497 ...............................CTGGAGCAGGAGGTGAGCG 515
| | ||||| | ||
sh01274 881 AGAGGACAAGAAGAAGAAAGGCAAAGGCAAGAGGCACCAGGACCGGGGCC 930
E D K K K K G K G K R H Q D R G Q
951 ----+----*----+----*----+----*----+----*----+----* 1000
D
msk07274 516 AGGACAACTATCTCTACCTACAGGAGCTGGCCTCCATCTACAGTCTCAAG 565
|| ||| || ||| || | |||| | || || |
sh01274 931 AGTGACCCTAGCTGCGCCTCTTGGGACCATCCTCACCGTCACCTCCCAGG 980
*
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msk07274 566 AGGCTCGATGCCTTCATCGATAGCTTCGTACTGAGCCA............ 603
|| | || || | | ||| ||| | | |
sh01274 981 GCTCTGTAGACCAGCAGCAACTTCTTAGTATTCCGGAAACATTATGTACA 1030
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msk07274 604 .................................................. 604
sh01274 1031 ACTTAGCAGCTTTTTTTACTTTTATGATTCTTGGTATTTCTATGATATCA 1080
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msk07274 604 .................................................. 604
sh01274 1081 CAGTAACCAATTAAATACTATCTGTAACTTTACATATCTTGCTTGAATAA 1130
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msk07274 604 .................................................. 604
sh01274 1131 CTAACCCTGGGCCCAGGCAGTGAGCAACCCCTTGTATCTTCACAGGTCTT 1180
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msk07274 604 .................................................. 604
sh01274 1181 TGCCCCGTGTTATGATTCCTCATGGGTCCTTGCTGACTGTCCCCCTGAGA 1230
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msk07274 604 ...............................................CTT 606
| |
sh01274 1231 GTAGCTGGCACGTGGGTAACACAGAAATTTCTGTAGTGAAGCTTGGGCCT 1280
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msk07274 607 CAGCACGCTGTCCTTCACGCCTGACTTCCTGCAGTCCATCTCCGTGCAGA 656
|| | | || | | | | | | || || || || ||
sh01274 1281 CAAAGGGTTCTCTTAGGCCACCTAGTCCAAGCCTCCCCAAACCTGGCTGA 1330
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msk07274 657 AGCTGTGTGTCTACCTGAGCAGTGGCCAGGTACAG............... 691
| | | | ||| || ||| | |||
sh01274 1331 ACTTTTAAGAATACAGATGCGTGAGCCCCGCTCAGAATTATGGAATCCAA 1380
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msk07274 692 .................................................. 692
sh01274 1381 AACCACCAGGAACGGGGAGGAGGTGGTGCCCAGAAGCTGTATTTTAACTA 1430
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msk07274 692 ........................CACAAATGGGAAT............. 704
|||| |||||||
sh01274 1431 GTTCTTGGAATTCTGGGTATTAGTCACATCTGGGAATCACTGGCAAGGTC 1480
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msk07274 705 .................................................. 705
sh01274 1481 CAGTGTGTTTGTTTTATAAATGAGTGCACAGAGACCACCCATGAGGGTGA 1530
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msk07274 705 .................................................. 705
sh01274 1531 GTGAGTGAGTGACCAGGGGCCACGCAGCTCGCTAGAATGTCAGATGAGAA 1580
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msk07274 705 .................................................. 705
sh01274 1581 ATGATGACTTCCCGGTGGGGAGCTGTTCTCCGTATCAGGTGAACGCTGTT 1630
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msk07274 705 .................................................. 705
sh01274 1631 TCTGAATAATTCCGTCTTTCCTCATTGGAAACCTTGAATTCTAAAACGTT 1680
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msk07274 705 .................................................. 705
sh01274 1681 ACAGGTAACCAAAAACGAAAAAAGGTATGAAGCTCTTTATACATATTTTT 1730
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msk07274 705 .................................................. 705
sh01274 1731 TTGTAATTTGTGCATTTTTTTCCTTTTTTTTTTTTTCTGAACCCACTGTC 1780
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msk07274 705 .................................................. 705
sh01274 1781 TTTTATATTACTGATGTACTGAGCTCCCAAATCTGTTTATTTCTCAGGAA 1830
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msk07274 705 .................................................. 705
sh01274 1831 AGAAAAAGTGAGTGCTATGGAATTTGCCATCGTTCTCTGTGACTCTATCT 1880
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msk07274 705 ..ACGACCTGCTGCAGGTGGCTCTGCAGTG..GCTCACGCAGCAGCCGGA 750
| | ||| || | || || ||| | || || | | || ||
sh01274 1881 TGAGGCGCTGTTGAAAGTTCCTGCACAGAGGAGCACATGTGGATCCCTGA 1930
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msk07274 751 GCGCGAGGTG.............CACACCCGCCGCGTTCTG......... 778
| | ||| | | | |||| || |||
sh01274 1931 GAAGGCAGTGGAGGGCTCCCTAACTCCCACGCCAGGTCCTGCCCCAGTTT 1980
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msk07274 779 ...........................................GAGAACA 785
|| |
sh01274 1981 TCTGCTTCTAAGTAGTTTCGTGCTGCTGGGCAAATTCTCGAACAAGTCCG 2030
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msk07274 786 TCCGCTTCCCCCTCTTCCCCGAGGA.......................CA 812
| | | || | || ||||| | |
sh01274 2031 TGTGTTCCCTCATCCACCCCGCTTAGCCACAGGATTAGATGGAATACCCT 2080
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msk07274 813 TCCTGCTACAGCGGGTGAAGCTGGCCATGTGCTCTCTGCTGCCCAGCGAG 862
| ||| | | || | |||||| ||||| || ||
sh01274 2081 CCAGGCTCCTCCCGGGTGATAGGGCCATTCAGCCTCTG.AGCTGTTCGTA 2129
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msk07274 863 GCCAACGGCGAGGGCTTTGTGGAGGAGGCCATGCACTACCACAACAGCCT 912
|| | | | || ||| | || || || | || | ||
sh01274 2130 CCCGGATGGCATCCCCTTCAGGATGTGGAGCTGGCCTGC....ACTGACT 2175
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msk07274 913 GGTGGCCCAGCCTGTCCTGCAGACGAAGCGAACGCTGCTGCGCTCCGAGG 962
|| | | | |||| || | | | | ||| | | |
sh01274 2176 CCTG..CAAACAGTTCCTAAAGCAGGTGTCAGGGTCGCTTGCCCTTTAAG 2223
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msk07274 963 AGTGCTTGCTCTTCGTGGGGGGCGAGGTCTCTGAGCGGTGTCTGGAGCTG 1012
|| || || | | | | || |||| || || ||
sh01274 2224 AGGGC.......TCTTAGCTGCCCGAGTGGATGAGAAACGTGCAGAACTA 2266
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msk07274 1013 AGCGATGACACCTGCTACCTAGACACCAAGAATGAGC.....AGTGGGTG 1057
| || || | | | | ||| |||||| | | ||
sh01274 2267 TGGGAGGATAGGAGTGTGATGGGTTTTAAGCATGAGCCAAGGAAGGCATG 2316
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msk07274 1058 AAGGAGACATCCCT.GCCGGCCCGCCGGAGCCACCACTGCGTCGCTGTGC 1106
|| ||| | ||| || | ||| | || | || |
sh01274 2317 AATGAGCTGTACCTCACCCAGCATCCGATGGCAGAGATCAGTAAACTTCA 2366
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msk07274 1107 TGGGGGGCTTCATCTTCATTGCCGGGGGCA.......GCTTCTCGAGAGA 1149
| | |||||||||||| | | | | | || ||| |
sh01274 2367 AGATGTGCTTCATCTTCAATCCTAGTCTAACACCAGTCTTCCTGCAGACA 2416
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msk07274 1150 CAACGGAGGGAATGCCGCCTCCAACCTTCTTTATAGGTATGACCCCCGCC 1199
| ||| | | | | | ||| | | | | | | |
sh01274 2417 GTTCCGAGAGCAGGTCTCGATGTCACTTGCCCTTTAAGAGGGCTCTCAGC 2466
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msk07274 1200 GTAAACAGTGGATCAAGGT............................... 1218
||||||| | | |
sh01274 2467 TGCTCGAGTGGATGAGGATCAATGTGTTAAGATTGATATTAGACTAGGAA 2516
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msk07274 1219 .................................................. 1219
sh01274 2517 AAAAATCTTAGTTAACTTTAATTTCCATTTCTTCTGCTTCTTTGCTGCCC 2566
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msk07274 1219 .................................................. 1219
sh01274 2567 CTCCTTTCCCTTCCCTTCAGGGTTTACTGTGGTTCTCACTGGTCTGTTTA 2616
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msk07274 1219 GGCGTCCATGAACCAGCGCCGTGTGGATTT.....CTACCTAGCTTCCAT 1263
| |||| | || | | | | |||| |||||| ||
sh01274 2617 TGTAGCCATCCAGAAGAGATGAGAGCATTTTGGGGACTGAAAGCTTCAAT 2666
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msk07274 1264 TGAAGACATGCTGGTGGCTGTCGGTGGCCGGAACGAGA............ 1301
| || | ||| |||| | | | | | | |
sh01274 2667 AGCCAACTTACTGCCCTCTGTGGTTAGTGAGGAGGGCAGTCTGCATGTTC 2716
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msk07274 1302 .............................ATGGAGCGCTGTCTTCTGTAG 1322
||||| | |||| |
sh01274 2717 AGCTAGCTAGTTATTTGCATGTGAAGTCCCTGGAGGCTTACAAACTGTTG 2766
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msk07274 1323 AGACCTACAGC....................................... 1333
||| | | ||
sh01274 2767 AGAGGTTCTGCGAGGCATACAAACAAACAGACCAAAAGGCTGGAAACTCT 2816
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msk07274 1334 .................................................. 1334
sh01274 2817 GCTTGGAGCTCTGCAGCATTCCGGTGTATGAAAGGTTCCGAGAAGTCTCA 2866
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msk07274 1334 .........................................CCCAAGACC 1342
| | |||
sh01274 2867 ACCCAGCATTTCCAAACTTCTTTGAGCCTAAAAGTCGTTTGTCTCATACC 2916
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msk07274 1343 AACTCCTGGACC...................................... 1354
| ||| ||||
sh01274 2917 TAGTCCCAGACCCCCACAAAACATGTTTTGCAGAACTTCTGCCAACTTTG 2966
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msk07274 1355 .................................................. 1355
sh01274 2967 GGATAGCTTACCCCCTTCCTATTCGGGAAAGGTTTTATTGCTTGTAGACC 3016
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msk07274 1355 ......................TACGTGGCCGGCTTGCCAAGGTTCACCT 1382
||||||| | | | || ||| |
sh01274 3017 CCTCAGAAGGCAGGGTAGGGTGTACGTGGGCTGTTCTCCCCATCTCAGCC 3066
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msk07274 1383 ATGGCCA..........................................C 1390
|| ||
sh01274 3067 TGGGTCATGAACAAACGGGCAGTTGTTTGGCCTGAATCTCGGGGCAAGTT 3116
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msk07274 1391 GCGGGCACCATCTACAAAGACTTTGT........................ 1416
| || | || || ||||||| |||
sh01274 3117 GGGGAGAGCACATAGAAAGACTCTGTGAGTGATTTGGGGAGTGGGATAGC 3166
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msk07274 1417 .................................................. 1417
sh01274 3167 TTTGACCTTGGAGAGAGGAGAGCCATTGGTTTTCAGCCTAAGCCAGCTCT 3216
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msk07274 1417 .................................................. 1417
sh01274 3217 TTTATGTTTTGCTTCTGGGACTTGTCCCTGGAAATGTGTGAGCTTCTGGC 3266
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msk07274 1417 .................................................. 1417
sh01274 3267 CTCTATTCTGATTTTCTTGTGCCTCATGAGTTACATACGACGTCCTGCGC 3316
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msk07274 1417 .................................................. 1417
sh01274 3317 TTCATATTTTGTGGTGTCTCTCCTGATACTATGAAGGTGGTTTGTAATTG 3366
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msk07274 1417 .................................................. 1417
sh01274 3367 ACATGGCTTTGACCCTAATATTACTAAGGTTGGGACCACCCTTTTAAAGG 3416
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msk07274 1417 .............CTACATCTCAGGGGGCCACGACTA............. 1440
| ||||| ||| | || |||
sh01274 3417 GAGGATAAAAAAGTTTCATCTTGTGGGTCAACTTCTAATATTTGATGGTG 3466
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msk07274 1441 .................................................. 1441
sh01274 3467 GGTACACTGTGAAAAGAAAGGTTTTTGAGCTTGTTGGGGTCAGTGGATGG 3516
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msk07274 1441 .................................................. 1441
sh01274 3517 GCACAAGGGCACCCAGTGGTGGTGCCCGGGCCAGGTTTTTGTTACTTGTT 3566
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msk07274 1441 .................................................. 1441
sh01274 3567 TTTTTAAGTTGAAAATTCACCCTACTGTGCATGAAAATGGAACTGAAAAT 3616
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msk07274 1441 .................................................. 1441
sh01274 3617 GGAAGAGACCATGCCTGGGCAACATGGCAAAACCCCATCTCTACAAAAAA 3666
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msk07274 1441 .................................CCAGATTGGCCCGTACC 1457
||| || | |
sh01274 3667 ATTACAAAAGATTAGCCAGGGATGGTGGGGCATGCAGTAGTCCCAGCTGC 3716
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msk07274 1458 GCAAGAACCTGCTGTGTTATGACCACCGGA..CAGACGTGTGGGAGGAGA 1505
| || ||| ||| | | |||| || | | || | | |
sh01274 3717 TTAGGAGGCTGAGGTGGGAGAATCACCTGAGCCTGGGAGGTTGAGGCTGC 3766
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msk07274 1506 GGCGGCCCATGACAACAGCTCGGGGCT....................... 1532
| | | ||||| ||| | | | ||
sh01274 3767 AGTGAGCTATGACCACACCACTGCACTCTAACCTGGGTGACGGAGTGAGA 3816
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msk07274 1533 .................................................. 1533
sh01274 3817 CCCTGTCTCAAAAGAATAAAATGTTTTTTAACTCAGATGGGCAGAGTTTG 3866
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msk07274 1533 GGCACAGCATGTGCA...GCCTGGGCGACAGCATCTACTCCATCGGGGG. 1578
||| || | |||| ||| || ||| | | | | |||
sh01274 3867 GGCTGTGCTTATGCAGTGGCCATTTGAACCGCACAGTCACGAATGTGGGG 3916
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msk07274 1579 .................................................. 1579
sh01274 3917 TTTTAAACTAGAGTGATGAAGGCACAGGTGCTTGCAGGCTGCCATTTTGA 3966
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msk07274 1579 ............CAGTGACGACCACATGGAGTCCATGGAGCGCTTCGATG 1616
|| | | | |||| | | || | ||| |
sh01274 3967 GAGGGAAACAGCCACACATGTCATCATGTTAAACTTTCAGTGTTTCAAGC 4016
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msk07274 1617 TGCTGGGCGTGGA..................................... 1629
| | || || |
sh01274 4017 TATTCTGCTTGAATTTTGAAGACACCTGGATCTTTTTTTTTTTTTAACAT 4066
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msk07274 1630 .................................................. 1630
sh01274 4067 TTCAAAATAAGCATGGCAGGCTTCTATTGAGGTTTGGACTTCTCTCATTT 4116
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msk07274 1630 ................................................GG 1631
||
sh01274 4117 CTAAAGAATTAGAGTTGTAACTTCATATTAGTTGTAAGTTTGGGGTTTGG 4166
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msk07274 1632 CCTACAGCCCACAGTGCAACCAGT.......................... 1655
| || || | | || | ||
sh01274 4167 TCCTCACCCAAGTTGGAAAGCTGTTTGCTTAAGACATAGATGTATTATAA 4216
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msk07274 1656 .................................................. 1656
sh01274 4217 TAATAGAAGGGAGGGAGTAGAAAGCTGATGAACCCTTGTTACTTATAGCA 4266
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msk07274 1656 .................................................. 1656
sh01274 4267 AACTTCCTGCTGTTTTAAATGCACAGAGATTATTTTATCAACTGTGGTTA 4316
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msk07274 1656 .................................................. 1656
sh01274 4317 GCACGCAATTGGTATTTTTATTGTTCTGCCATTTTATTGAGGCTATCAAG 4366
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msk07274 1656 ..GGACTCGCGTGGCGCCGCTGCTGCAGGCCAACAGCGAG.......... 1693
||||| | | | ||| | ||| | | |
sh01274 4367 TGGGACTTCAGACCTGGCTCTGAGCAGGACCACACGTGTGTATTTATATT 4416
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msk07274 1694 .................................................. 1694
sh01274 4417 GAGTGCCCTCACTCATGATAAGGTGACTTCATGGAGACCCAGAAACTCAC 4466
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msk07274 1694 ..TCAGGCGTGGCCGTGTGGCAGGGCCGCATCTACATCCTGGGG...... 1735
| ||| ||| | | ||| ||||| | || ||| ||
sh01274 4467 CCTAAGGGGTGTTCACCTTTGAGGTGGGCATCCAGATGCTGAGGGGAAGT 4516
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msk07274 1736 ......................GGGTACAGCTGGGAGAGCACAGCCTTCT 1763
||| | || | |||| ||| | |
sh01274 4517 GGGGTCCATCCTCTGAGGTCCAGGGGCCTACTTTGTGAGCTCAGTTGTGT 4566
4601 ----+----*----+----*----+----*----+----*----+----* 4650
msk07274 1764 CCAGGGCTGTGCAGGTGTA...TGATAGCGAGGCCAA............. 1797
|| || ||||| | | | |||||
sh01274 4567 TCACCTGTGGTTCAGTGTACCTCGGCCCCTAAGCCAAGTGATCGTTCAGT 4616
4651 ----+----*----+----*----+----*----+----*----+----* 4700
msk07274 1798 .................................................. 1798
sh01274 4617 GACTTGCAGCAATGTGGGAAGTGAGGGGACCCCTGCCACACCCCCCACCA 4666
4701 ----+----*----+----*----+----*----+----*----+----* 4750
msk07274 1798 ..................................CAGGTGGAGCCGGGGT 1813
| ||| | ||
sh01274 4667 CCCCCTGTAGAGTCACTGACCTTCATCCTTCACCCTGGTCCTCCATGGTG 4716
4751 ----+----*----+----*----+----*----+----*----+----* 4800
msk07274 1814 CCTGACCTCCCCAACGCCATTGCGGGTGTGTCGGCCTGTGTGT....... 1856
| | | | || | | ||| || ||| ||| ||| |
sh01274 4717 CAGCAGCATCTCATGGGCCTTGTGGCTGTCAGAGCCCGTGGTTGGAACCC 4766
4801 ----+----*----+----*----+----*----+----*----+----* 4850
msk07274 1857 .GTGCCCTCAACCCAAGGCTGGAGGAAAAGAAGAAGAGGA.......... 1895
|| | || ||||| ||||||| || | ||| ||
sh01274 4767 CGTCCACTGGTCCCAAACCTGGAGGGGCAGCTGCAGATGAGGTTTAGACC 4816
4851 ----+----*----+----*----+----*----+----*----+----* 4900
msk07274 1896 .................................................. 1896
sh01274 4817 TCCTGGTGTCTCCGTGGATTCTGAGTGCCCAGGAGGGGAGGGGAGGGGGT 4866
4901 ----+----*----+----*----+----*----+----*----+----* 4950
msk07274 1896 ............ACAAGGACAAATGCCAGGA.CCGAGGTCAGTGACCCCG 1932
| |||| ||||||| ||| ||| ||| | | | |
sh01274 4867 GGCATCCTGGCCTCTAGGATAAATGCCTGGAGTATAGGGCAGCGCCACGG 4916
4951 ----+----*----+----*----+----*----+----*----+----* 5000
msk07274 1933 AGGCGCTCACAGAGGCGGCCGTCTCCGTGACAATCC.............. 1968
| | | | | || ||| ||
sh01274 4917 GCACTTGGAGACCCTGTCCTGCGCATCTGCCAAGCCTGGCAGTTTTTAGA 4966
5001 ----+----*----+----*----+----*----+----*----+----* 5050
msk07274 1969 .................................................. 1969
sh01274 4967 GTTTTTTGAAATGTTTTGATACTTTTTGATACAATTTGCTAATAACTGTT 5016
5051 ----+----*----+----*----+----*----+----*----+----* 5100
msk07274 1969 .......................TCCACCCCACCCCCCTCCAGCAGCTTT 1995
|||||| || ||| ||| | ||
sh01274 5017 TTGTAGAATGCCTGCCAGGGTTTTCCACCTCATCCCTTTCCTCCGGCCCC 5066
5101 ----+----*----+----*----+----*----+----*----+----* 5150
msk07274 1996 TTG............................................... 1998
|||
sh01274 5067 TTGATTTGTGCTGGACAACAAATGGCAGCACCAGGACCTCGCCTCATGTG 5116
5151 ----+----*----+----*----+----*----+----*----+----* 5200
msk07274 1999 .................................................. 1999
sh01274 5117 GCTTTGTCTTGGATCTTGCCCTTCTCCATCGCTGATGTGATACAGCTCTA 5166
5201 ----+----*----+----*----+----*----+----*----+----* 5250
msk07274 1999 .................................................. 1999
sh01274 5167 GAATTTCGTGAAGTTGCATGCAAAGTTGCATGCAGCCCGTGGGTATGACT 5216
5251 ----+----*----+----*----+----*----+----*----+----* 5300
msk07274 1999 .................................................. 1999
sh01274 5217 GTCTCAGGCCCCCAGCTCATTTGCCAAGAGGAAACCTTAACCCCCCTGAG 5266
5301 ----+----*----+----*----+----*----+----*----+----* 5350
msk07274 1999 .................................................. 1999
sh01274 5267 AGGGTCTGCGTTTCTTCTAGAGCTCCTACCTCAGTGGTGTGCACAGAGTT 5316
5351 ----+----*----+----*----+----*----+----*----+----* 5400
msk07274 1999 .................................................. 1999
sh01274 5317 GGAGACACCTGAGGGCTGGTCCACGTCTCACCTTTGCCATACGGGTCATT 5366
5401 ----+----*----+----*----+----*----+----*----+----* 5450
msk07274 1999 ...........................TACTTTTTTCATTCCCGGTCTTT 2021
| ||| || ||| ||||
sh01274 5367 TCTTGATCAAATATATGACTGGGGTCCTGGTTTACTCCCGCCCACCCTTT 5416
5451 ----+----*----+----*----+----*----+----*----+----* 5500
msk07274 2022 CTATGCTACCACAGTAAA....................TAATAATTAAAT 2051
|| | | | | || || ||| ||
sh01274 5417 CTTTTAAAGTATTCTTAACATGAAATCCACAAAAGCGGAAACAATGAACC 5466
5501 ----+----*----+----*----+----*----+----*----+----* 5550
msk07274 2052 ATTCTTCACAATTTC................................... 2066
|||||| || |
sh01274 5467 ATTCTTGCACTTTACAGAATCATTGTCCTTAGCTTTAGAGGTTGTTAATT 5516
5551 ----+----*----+----*----+----*----+----*----+----* 5600
msk07274 2067 .................................................. 2067
sh01274 5517 TCTTGTTTTTAACATGAACAGAATGTGTGGTTCTGAAGGTGTGTGGGGGT 5566
5601 ----+----*----+----*----+----*----+----*----+----* 5650
msk07274 2067 .................................................. 2067
sh01274 5567 CTCAAGAAATTGTCCTTTGGGGCCGGGCGCAGTGGCTCACGCCTGTACTC 5616
5651 ----+----*----+----*----+----*----+----*----+----* 5700
msk07274 2067 .................................................. 2067
sh01274 5617 CCAGCACTCTGGGAGGCCAAGGGGGACGGATCACCTGAGGTCAAGAGTTT 5666
5701 ----+----*----+----*----+----*----+----*----+----* 5750
msk07274 2067 .................................................. 2067
sh01274 5667 GAGACCACCCTGACCAACATGGTGAAACCCCGTCTCTACTAAAATACAAA 5716
5751 ----+----*----+----*----+----*----+----*----+----* 5800
msk07274 2067 .................................................. 2067
sh01274 5717 AATTAGGCAGTCGTGGTCGCCTGTAATCTCAGCTCTTCCGGAGGCTGAGG 5766
5801 ----+----*----+----*----+----*----+----*----+----* 5850
msk07274 2067 .................................................. 2067
sh01274 5767 CAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGGTT 5816
5851 ----+----*----+----*----+----*----+----*--- 5893
msk07274 2067 ........................................... 2067
sh01274 5817 GCGCCACTGCACTCCAGCCTGGGTGACCGAGTAAGACTGTCTC 5859