Comparison of KIAA cDNA sequences between mouse and human (KIAA0085)
<<Original sequence data>>
mouse mKIAA0085 (msk07136) length: 1322 bp, CDS: 3 - 794
human KIAA0085 (ha01520) length: 2169 bp, CDS: 1 - 810
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 2 - 3 1 1 50.0
CDS: 4 - 812 625 169 21.3
3'UTR: 813 - 1404 327 203 38.3
amino acid
CDS: 4 - 812 193 76 28.3
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
G G L N W A I D D - R W G H
msk07136 1 .GGGGAGGATTAAATTGGGCCATTGACGACCG.......AGATGGGGCCA 42
| ||||| | |||| ||| ||| | ||||
ha01520 1 AGAGGAGGGGACGGCAGCACCATGGACCCCCGCTTGTCCACTGTCCGCCA 50
R G G D G S T M D P R L S T V R Q
51 ----+----*----+----*----+----*----+----*----+----* 100
A L W N C R V L T G R S Y L A N
msk07136 43 CGCTTTGTGGAACTGTAGGGTGCAGTTACAGGAAGATCCTACCTGGCCAA 92
| | || || | || | | | || || ||||||||
ha01520 51 GACCTGCTGCTGCTTCAATGTCC..GCATCGCAACCACCGCCCTGGCCAT 98
T C C C F N V R I A T T A L A I
101 ----+----*----+----*----+----*----+----*----+----* 150
V M S V L L F I E H V V E V
msk07136 93 C.......GGGTCATGAGTGTCCTGCTGTTCATTGAGCATGTGGTGGAGG 135
| | ||||||| ||| || ||||||| ||||| ||| ||||
ha01520 99 CTACCATGTGATCATGAGCGTCTTGTTGTTCATCGAGCACTCGGTAGAGG 148
Y H V I M S V L L F I E H S V E V
151 ----+----*----+----*----+----*----+----*----+----* 200
A R G K V S C R F F K M P Y L R
msk07136 136 TGGCCCGCGGTAAAGTGTCCTGTAGGTTCTTCAAGATGCCGTACCTCAGG 185
|||||| || || | |||||| | | ||| | ||||| |||||||||
ha01520 149 TGGCCCATGGCAAGGCGTCCTGCAAGCTCTCCCAGATGGGCTACCTCAGG 198
A H G K A S C K L S Q M G Y L R
201 ----+----*----+----*----+----*----+----*----+----* 250
M A D L L S S F L L I G V L F I I
msk07136 186 ATGGCTGACCTGCTCTCCAGCTTCCTGCTCATTGGCGTGCTCTTCATCAT 235
|| ||||||||| ||||||||||||||||||| | |||||||||||||
ha01520 199 ATCGCTGACCTGATCTCCAGCTTCCTGCTCATCACCATGCTCTTCATCAT 248
I A D L I S S F L L I T M L F I I
251 ----+----*----+----*----+----*----+----*----+----* 300
S I S L L F G V V K N R E K Y L I
msk07136 236 CAGCATCAGCCTGCTGTTCGGCGTGGTCAAGAACCGGGAGAAGTACCTGA 285
|||| | ||||| ||| ||||||| ||||||||||||||||||||||||
ha01520 249 CAGCCTGAGCCTACTGATCGGCGTAGTCAAGAACCGGGAGAAGTACCTGC 298
S L S L L I G V V K N R E K Y L L
301 ----+----*----+----*----+----*----+----*----+----* 350
P F L S L Q I M D F L L C L L T
msk07136 286 TACCCTTCCTGTCCCTTCAAATCATGGACTTCCTGCTCTGCCTGCTCACA 335
| |||||||||||||| ||||||||||||| || || |||||||||||
ha01520 299 TGCCCTTCCTGTCCCTGCAAATCATGGACTATCTCCTGTGCCTGCTCACC 348
P F L S L Q I M D Y L L C L L T
351 ----+----*----+----*----+----*----+----*----+----* 400
L L G S Y I E L P A Y L K L - R
msk07136 336 CTGCTGGGCTCCTACATCGAATTGCCAGCGTACTTGAAGCTTG...CCCG 382
||||||||||||||||| || |||| || ||| | ||| | | ||||
ha01520 349 CTGCTGGGCTCCTACATTGAGCTGCCCGCCTACCTCAAGTTGGCCTCCCG 398
L L G S Y I E L P A Y L K L A S R
401 ----+----*----+----*----+----*----+----*----+----* 450
P R P G P S K V P L M T L Q L L D
msk07136 383 GCCCCGGCCTGGTCCTTCTAAGGTCCCCTTGATGACACTGCAGCTGCTAG 432
| ||| || | | || ||| ||||| ||||||| ||||||||||| |
ha01520 399 GAGCCGTGCTAGCTCCTCCAAGTTCCCCCTGATGACGCTGCAGCTGCTGG 448
S R A S S S K F P L M T L Q L L D
451 ----+----*----+----*----+----*----+----*----+----* 500
F C L S I L T L C S S Y M E V P
msk07136 433 ACTTCTGTTTGAGTATCCTGACCCTGTGCAGCTCCTACATGGAAGTGCCC 482
||||||| |||| ||||||||||| ||||||||||||||||||||||||
ha01520 449 ACTTCTGCCTGAGCATCCTGACCCTCTGCAGCTCCTACATGGAAGTGCCC 498
F C L S I L T L C S S Y M E V P
501 ----+----*----+----*----+----*----+----*----+----* 550
T Y L N F K S M N H M N Y L P S Q
msk07136 483 ACCTACCTCAACTTCAAGTCCATGAACCACATGAATTACCTCCCAAGCCA 532
||||| |||||||||||||||||||||||||||||||||||||| |||||
ha01520 499 ACCTATCTCAACTTCAAGTCCATGAACCACATGAATTACCTCCCCAGCCA 548
T Y L N F K S M N H M N Y L P S Q
551 ----+----*----+----*----+----*----+----*----+----* 600
E G V P H S Q F I N M M L I F S V
msk07136 533 GGAGGGTGTGCCGCACAGCCAGTTCATCAACATGATGCTCATCTTCTCAG 582
||||| | |||| || | |||||||||||| |||||| ||||||| ||
ha01520 549 GGAGGATATGCCTCATAACCAGTTCATCAAGATGATGATCATCTTTTCCA 598
E D M P H N Q F I K M M I I F S I
601 ----+----*----+----*----+----*----+----*----+----* 650
A F I T V L I L K V Y M F K C V
msk07136 583 TGGCCTTTATCACCGTGCTCATCCTGAAGGTCTACATGTTCAAGTGTGTG 632
| ||||| ||||| || || ||| | |||||||||||||||||||| |||
ha01520 599 TCGCCTTCATCACTGTCCTTATCTTCAAGGTCTACATGTTCAAGTGCGTG 648
A F I T V L I F K V Y M F K C V
651 ----+----*----+----*----+----*----+----*----+----* 700
Y T C Y K F L K H M N S A M E D S
msk07136 633 TACACATGCTACAAATTCTTGAAGCACATGAATTCGGCCATGGAGGACAG 682
| ||||||| ||| | ||| |||||| |||| |||| | ||
ha01520 649 TGGCGGTGCTACAGATTGATCAAGTGCATGAACTCGGTGGAGGAGAAGAG 698
W R C Y R L I K C M N S V E E K R
701 ----+----*----+----*----+----*----+----*----+----* 750
S S K M F L K V A L P S Y E E A L
msk07136 683 CAGCTCCAAGATGTTCCTCAAGGTGGCTCTGCCGTCCTACGAGGAAGCCT 732
| |||||||||| ||| ||||||| |||||||||||||||||||||
ha01520 699 AAACTCCAAGATGCTCCAGAAGGTGGTCCTGCCGTCCTACGAGGAAGCCC 748
N S K M L Q K V V L P S Y E E A L
751 ----+----*----+----*----+----*----+----*----+----* 800
S L P P K T P E G D P A P P P Y
msk07136 733 TGTCTCTGCCCCCTAAGACTCCAGAGGGGGACCCTGCACCACCCCCATAC 782
||||| |||| | ||||| |||||||||| ||| |||||||||||||||
ha01520 749 TGTCTTTGCCATCGAAGACCCCAGAGGGGGGCCCAGCACCACCCCCATAC 798
S L P S K T P E G G P A P P P Y
801 ----+----*----+----*----+----*----+----*----+----* 850
S E V *
msk07136 783 TCAGAAGTGTGATCCCCACCAGGCCTTTAGCCCTTGGGCTGGGAGAGGCA 832
||||| |||||| || | ||||||| ||||| | |||||||| ||
ha01520 799 TCAGAGGTGTGACCCTCGCCAGGCC.CCAGCCCCAGTGCTGGGAGGGGTG 847
S E V *
851 ----+----*----+----*----+----*----+----*----+----* 900
msk07136 833 GAACTTCCTCCT..CCTGCTTCTTCACTTTGGTGGTTGCTGTGGCCTGCC 880
|| || |||| | |||||| || ||||||||| ||||||||||
ha01520 848 GAGCTGCCTCATAATCTGCTTTTTTGCTTTGGTGGCCCCTGTGGCCTGGG 897
901 ----+----*----+----*----+----*----+----*----+----* 950
msk07136 881 TG..................CTACAGGACAATCTGCTTGTGCCCCCCCTC 912
|| |||||||||||||||||| | |||
ha01520 898 TGGGCCCTCCCGCCCCTCCCTGGCAGGACAATCTGCTTGTGTCTCCCTCG 947
951 ----+----*----+----*----+----*----+----*----+----* 1000
msk07136 913 ACTGTCCTCTCCTCTCGGGGACCC.....CTCACTCACAACTGAGTCA.. 955
| | |||||| | | || |||||||||| ||||
ha01520 948 CTGGCCTGCTCCTCCTGCAGGGCCTGTGAGCTGCTCACAACTGGGTCAAC 997
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msk07136 956 .CCCTGGGCTCAGTGACCCTTTGCGGCTCAGGAT.ACTCAGCCTAGCA.. 1001
| | |||| ||| || | | | | ||| || | |||||| | ||
ha01520 998 GCTTTAGGCTGAGTCACTCCTCGGGTCTCTCCATAATTCAGCCCAACAAT 1047
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msk07136 1002 GCCCGTCTCGTCTCCATCAGCAGTGACACTTGTTCAGAGCGCAGCCATAG 1051
|| | | | || |||||| ||||||||||| ||| | |
ha01520 1048 GCTTGGTTTATTTCAATCAGCTCTGACACTTGTTTAGACGATTGGCCATT 1097
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msk07136 1052 GAAGTTAGGGTGCGTTTGGTTAACAGCTACCGGCTTGATCTGTTTGGCCA 1101
| |||| ||||| | || ||| || ||||||| ||| ||||
ha01520 1098 CTAAAGTTGGTGAGTTTGTCAAGCAACTATCGACTTGATCAGTTCAGCCA 1147
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msk07136 1102 GGCAGCAG..........................CAGGAAGAGAATCTGG 1125
||| | | ||| || | ||| |||
ha01520 1148 AGCAACTGACAAATCAAAAACCCACTTGTCAGTTCAGTAAAATAATTTGG 1197
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msk07136 1126 CCAAGCAATAGTTCCTGGTGTCAGTTTATACTCAGCTGTCAGACGACAGG 1175
||| ||| ||| | | | |||||| || |||||| |||
ha01520 1198 TCAAACAACAGTCTATTGCATTGATTTATAAATAGTTGTCAGTTCACA.. 1245
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msk07136 1176 ATGGGTCATGATTGTGGTGCCCGTTTGCCACCTCCAGTACCCCAAAAGTG 1225
| | | | | | | |||||| | |
ha01520 1246 ......TAGCAATTTAATCAAGTAATCATTAATTAGTTACCCCCTATATA 1289
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msk07136 1226 TACAAACA...AAACAATTCCTTCAAATAGCTTGCTTAAAT....AGCGA 1268
|| | | | || ||||| |||||||||||||||||| || | | |
ha01520 1290 TAAATATATGTAATCAATTTCTTCAAATAGCTTGCTTACATGATAATCAA 1339
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msk07136 1269 TTCAGCCAACTGCTGTCATTAGGAATTATGATAAAATCTAGTAAGAAACT 1318
|| | | | |||||| |||| ||||||| | | | | |
ha01520 1340 TTAGCCAACCATGAGTCATTTAGAATAGTGATAAATAGAATACACAGAAT 1389
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msk07136 1319 GAGG.............................................. 1322
|
ha01520 1390 AGTGATGAAATTCAATTTAAAAAATCACGTTAGCCTCCAAACCATTTAAT 1439
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msk07136 1323 .................................................. 1323
ha01520 1440 TCAAATGAACCCATCAACTGGATGCCAACTCTGGCGAATGTAGGACCTCT 1489
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msk07136 1323 .................................................. 1323
ha01520 1490 GAGTGGCTGTATAATTGTTAATTCAAATGAAATTCATTTAAACAGTTGAC 1539
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msk07136 1323 .................................................. 1323
ha01520 1540 AAACTGTCATTCAACAATTAGCTCCAGGAAATAACAGTTATTTCATCATA 1589
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msk07136 1323 .................................................. 1323
ha01520 1590 AAACAGTCCCTTCAAACACACAATTGTTCTGCTGAAGAGTTGTCATCAAC 1639
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msk07136 1323 .................................................. 1323
ha01520 1640 AATCCAATGCTCACCTATTCAGTTGCTCTGTGGTCAGTGTGGCTGCATAG 1689
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msk07136 1323 .................................................. 1323
ha01520 1690 CAGTGGATTCCATGAAAGGAGTCATTTTAGTGATGAGCTGCCAGTCCATT 1739
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msk07136 1323 .................................................. 1323
ha01520 1740 CCCAGGCCAGGCTGTCGCTGGCCATCCATTCAGTCGATTCAGTCATAGGC 1789
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msk07136 1323 .................................................. 1323
ha01520 1790 GAATCTGTTCTGCCCGAGGCTTGTGGTCAAGCAAAAATTCAGCCCTGAAA 1839
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msk07136 1323 .................................................. 1323
ha01520 1840 TCAGGCACATCTGTTCGTTGGACTAAACCCACAGGTTAGTTCAGTCAAAG 1889
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msk07136 1323 .................................................. 1323
ha01520 1890 CAGGCAACCCCCTTGTGGGCACTGACCCTGCCACTGGGGTCATGGCGGTT 1939
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msk07136 1323 .................................................. 1323
ha01520 1940 GTGGCAGCTGGGGAGGTTTGGCCCCAACAGCCCTCCTGTGCCTGCTTCCC 1989
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msk07136 1323 .................................................. 1323
ha01520 1990 TGTGTGTCGGGGTCCTCCAGGGAGCTGACCCAGAGGTGGAGGCCACGGAG 2039
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msk07136 1323 .................................................. 1323
ha01520 2040 GCAGGGTCTCTGGGGACTGTCGGGGGGTACAGAGGGAGAAGGCTCTGCAA 2089
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msk07136 1323 .................................................. 1323
ha01520 2090 GAGCTCCCTGGCAATACCCCCTTGTGTAATTGCTTTGTGTGCGACAGGGA 2139
2151 ----+----*----+----*----+----* 2180
msk07136 1323 .............................. 1323
ha01520 2140 GGAAGTTTCAATAAAGCAGCAACAAGCTTC 2169