Comparison of KIAA cDNA sequences between mouse and human (FLJ00158)
<<Original sequence data>>
mouse mFLJ00158 (msk05209) length: 911 bp, CDS: 3 - 713
human (sh06588) length: 5203 bp, CDS: 10 - 936
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 72 - 75 1 3 75.0
CDS: 76 - 936 62 37 37.4
3'UTR: 937 - 5216 581 222 27.6
amino acid
CDS: 76 - 936 13 274 95.5
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msk05209 1 .................................................. 1
sh06588 1 GCACGCTGAGCTGAAGGGTGTGCGGAGCGGCGCGGCACAGAGCCTGTTGT 50
A E G C A E R R G T E P V V
51 ----+----*----+----*----+----*----+----*----+----* 100
E G A R Q P * G C Q
msk05209 1 .....................AGAAGGAGCAAGGCAACCTTAAGGATGTC 29
| || || ||| | | ||| | |
sh06588 51 TGAGCTCAGTATGTCGTGGGAATCCGGGGCCGGGCCAGGTCTAGGTTCCC 100
E L S M S W E S G A G P G L G S Q
101 ----+----*----+----*----+----*----+----*----+----* 150
-
msk05209 30 AAG............................................... 32
| |
sh06588 101 AGGGGATGGATCTCGTGTGGAGTGCGTGGTACGGAAAGTGCGTTAAAGGG 150
G M D L V W S A W Y G K C V K G
151 ----+----*----+----*----+----*----+----*----+----* 200
msk05209 33 .................................................. 33
sh06588 151 AAAGGGTCGTTGCCACTCTCGGCCCACGGCATCGTGGTCGCCTGGCTCAG 200
K G S L P L S A H G I V V A W L S
201 ----+----*----+----*----+----*----+----*----+----* 250
msk05209 33 .................................................. 33
sh06588 201 CAGGGCCGAGTGGGACCAGGTGACGGTTTATCTGTTCTGTGACGACCATA 250
R A E W D Q V T V Y L F C D D H K
251 ----+----*----+----*----+----*----+----*----+----* 300
msk05209 33 .................................................. 33
sh06588 251 AGTTGCAGCGGTACGCGCTTAACCGCATCACGGTGTGGAGGAGCAGGTCA 300
L Q R Y A L N R I T V W R S R S
301 ----+----*----+----*----+----*----+----*----+----* 350
msk05209 33 .................................................. 33
sh06588 301 GGCAACGAACTCCCTCTGGCAGTGGCTTCTACTGCTGACCTGATACGCTG 350
G N E L P L A V A S T A D L I R C
351 ----+----*----+----*----+----*----+----*----+----* 400
msk05209 33 .................................................. 33
sh06588 351 TAAGCTCTTGGATGTAACTGGTGGCTTGGGCACTGATGAACTTAGACTGC 400
K L L D V T G G L G T D E L R L L
401 ----+----*----+----*----+----*----+----*----+----* 450
msk05209 33 .................................................. 33
sh06588 401 TCTATGGCATGGCATTGGTCAGGTTTGTGAATCTTATCTCAGAGAGGAAG 450
Y G M A L V R F V N L I S E R K
451 ----+----*----+----*----+----*----+----*----+----* 500
msk05209 33 .................................................. 33
sh06588 451 ACAAAGTTTGCCAAGGTCCCCCTCAAGTGTCTGGCTCAAGAGGTAAATAT 500
T K F A K V P L K C L A Q E V N I
501 ----+----*----+----*----+----*----+----*----+----* 550
msk05209 33 .................................................. 33
sh06588 501 TCCGGATTGGATTGTTGACCTTCGCCATGAGTTGACCCACAAGAAAATGC 550
P D W I V D L R H E L T H K K M P
551 ----+----*----+----*----+----*----+----*----+----* 600
msk05209 33 .................................................. 33
sh06588 551 CCCATATAAATGACTGCCGCAGAGGCTGCTACTTTGTCCTGGATTGGCTC 600
H I N D C R R G C Y F V L D W L
601 ----+----*----+----*----+----*----+----*----+----* 650
Q E E K K E N E E E
msk05209 33 .....................CAAGAGGAGAAAAAGGAGAATGAGGAAGA 61
||| |||||| | || |||
sh06588 601 CAGAAGACCTATTGGTGCCGCCAACTGGAGAACAGCCTGAGAGAGACCTG 650
Q K T Y W C R Q L E N S L R E T W
651 ----+----*----+----*----+----*----+----*----+----* 700
E K E - E E M E E E E E -
msk05209 62 GGAGAAGGAGGA......GGAGGAGATGGAGGAGGAGGAAGAAGA..... 100
|||| |||||| ||| | ||| ||||| ||||| ||||
sh06588 651 GGAGTTGGAGGAGTTCAGGGAAGGGATAGAGGAAGAGGATCAAGAGGAAG 700
E L E E F R E G I E E E D Q E E D
701 ----+----*----+----*----+----*----+----*----+----* 750
msk05209 101 .................................................. 101
sh06588 701 ATAAGAACATTGTTGTTGATGACATCACAGAACAGAAACCAGAGCCTCAG 750
K N I V V D D I T E Q K P E P Q
751 ----+----*----+----*----+----*----+----*----+----* 800
msk05209 101 .................................................. 101
sh06588 751 GATGATGGGAAAAGTACGGAGTCAGATGTAAAGGCCGATGGAGACAGCAA 800
D D G K S T E S D V K A D G D S K
801 ----+----*----+----*----+----*----+----*----+----* 850
msk05209 101 .................................................. 101
sh06588 801 AGGCAGCGAAGAGGTGGATTCTCATTGCAAAAAGGCCCTGAGTCATAAAG 850
G S E E V D S H C K K A L S H K E
851 ----+----*----+----*----+----*----+----*----+----* 900
msk05209 101 .................................................. 101
sh06588 851 AGCTATATGAAAGAGCCCGAGAACTGCTGGTATCATACGAAGAGGAGCAG 900
L Y E R A R E L L V S Y E E E Q
901 ----+----*----+----*----+----*----+----*----+----* 950
msk05209 101 .................................................. 101
sh06588 901 TTTACGGGAGGCTGTGCTGGATGCTTTTCTGGATGATGGCTTCCTTGTCC 950
F T G G C A G C F S G *
951 ----+----*----+----*----+----*----+----*----+----* 1000
msk05209 101 .................................................. 101
sh06588 951 CCACATTTGAACAGTTGGCAGCTTTGCAGATAGAATATGAAGATGGTCAG 1000
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msk05209 101 .................................................. 101
sh06588 1001 ACTGAGGTCCAGAGAGGGGAAGGTACTGACCCAAAGTCACACAAAAACGT 1050
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msk05209 101 .................................................. 101
sh06588 1051 GGACTTGAATGACGTCCTGGTGCCAAAGCCGTTCTCTCAGTTCTGGCAGC 1100
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msk05209 101 .................................................. 101
sh06588 1101 CCCTGCTCAGGGGCCTGCACTCCCAGAACTTCACGCAGGCCCTATTGGAG 1150
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msk05209 101 .................................................. 101
sh06588 1151 AGGATGCTCTCTGAACTGCCAGCCTTGGGGATCAGCGGGATCCGGCCTAC 1200
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msk05209 101 .................................................. 101
sh06588 1201 CTACATCCTCAGATGGACCGTTGAACTGATCGTGGCCAACACCAAGACTG 1250
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msk05209 101 .................................................. 101
sh06588 1251 GACGGAATGCTCGCCGATTTTCTGCAGGCCAGTGGGAAGCAAGAAGGGGC 1300
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msk05209 101 .................................................. 101
sh06588 1301 TGGAGGCTGTTCAACTGCTCCGCCTCCCTTGACTGGCCCCGGATGGTTGA 1350
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msk05209 101 .................................................. 101
sh06588 1351 GTCCTGCTTGGGCTCACCTTGCTGGGCCAGCCCCCAACTCCTTCGGATGT 1400
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msk05209 101 .................................................. 101
sh06588 1401 AAGTCTCTTGAATTCCATCCGGTAAGAGGGTGAGGCCCTTCAAGCCTCAG 1450
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msk05209 101 .................................................. 101
sh06588 1451 GGCCACACTGCCCTAGAATGACTGAGTTAGAAGGGCCCTTTGGGGACAGT 1500
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msk05209 101 .................................................. 101
sh06588 1501 CTAGCCCAGTCTCACTCCCACTGACAGATGGGACAACTGAGTCCAGAGAG 1550
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msk05209 101 .................................................. 101
sh06588 1551 GGGAGGGGTAGGGTTTTCTTACCTAAGATCATACAGCTTAAGACCTGACT 1600
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msk05209 101 .................................................. 101
sh06588 1601 GAACTGAGTCCAGTGTGGGAATGGATAAGACAATCCCCCTAGAGTGCTTA 1650
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msk05209 101 .................................................. 101
sh06588 1651 GCACAGTGGCCTGCACAGAGTAAGTGCACAATAAATGGTAGCTGCTGTTT 1700
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msk05209 101 .................................................. 101
sh06588 1701 ATTATTGAACCCAGGTCTTCTGACTCCAAGCCCAGTGCTGTTTCCTCTAT 1750
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msk05209 101 .................................................. 101
sh06588 1751 TATCTTTCCAAAGTATACCTCTGATAGTTGCTTAGCAACCTTCAGTTGCT 1800
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msk05209 101 .................................................. 101
sh06588 1801 CCCTATTGCCTTCCTGTTAAGTCTAGGCTTCTTAGCCTGACATTCAAAGA 1850
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msk05209 101 .................................................. 101
sh06588 1851 TCTTTCTGATTCTGGCCCAACTTACCATGGTAGCCATACCTCCTGTGAGT 1900
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msk05209 101 .................................................. 101
sh06588 1901 CTCCTTTACCCTATCCACCCTGGGTTCTATGGTCAAACTGAATATTGCAC 1950
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msk05209 101 .................................................. 101
sh06588 1951 TGGTAAATACCTGTGGTTGTCTCCCTTTCCTTTTCTCTGTCATTTCCTGA 2000
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msk05209 101 .................................................. 101
sh06588 2001 CCCTGAGCCACTTCCCTCATAATCATGGAAGCCTTTAGCGCCTGATTCCC 2050
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msk05209 101 .................................................. 101
sh06588 2051 TTCTTGCTTTCTTGAGCAATATCTGTTTCATTTGGATGACTCATCTGACA 2100
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msk05209 101 .................................................. 101
sh06588 2101 CTCTACAGCTCCTCAACTCCAGTGACTTTCATTCTCCACTACACTCAGCA 2150
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msk05209 101 .................................................. 101
sh06588 2151 ACCCATTTCCATCATTCGGAGCTATTCCACCTCTGAAAGCTCACATCCCA 2200
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msk05209 101 .................................................. 101
sh06588 2201 GCATCCCACTCGGTGACCACCACTTCTCGTCCTTCTAGTTCTCACCCTTG 2250
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msk05209 101 .................................................. 101
sh06588 2251 CATCCCATGACATCTGCTCTTTGCCTGCATCCAGATCTCCATCCCTCCAT 2300
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msk05209 101 .................................................. 101
sh06588 2301 TTCCTGCATCCCTTGACCTTGCTTCCTCTCTATCCTGTCTGTGGTTGCTC 2350
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msk05209 101 .................................................. 101
sh06588 2351 AGTTCGGCCACTCATCATCAGCACCTTCAGCTTTGCCCATCCTTTGGCCA 2400
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msk05209 101 .................................................. 101
sh06588 2401 TATCTGACTTGCAAACCCCTGAGCTGGAATTGATCCTCCCCATTCTGCTT 2450
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msk05209 101 .................................................. 101
sh06588 2451 CCCCTGCTCCTCAGCCCGGGTAGCTGAGCTCTGCTGGAGAAAACCACATA 2500
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msk05209 101 .................................................. 101
sh06588 2501 GCCCTGCGGATTGCTGCCACTGCAGAGGTATGATTTTTAATCTCGGGCGA 2550
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msk05209 101 .................................................. 101
sh06588 2551 GGCCTCAGTTCTGCTTGTCTGAACTTTTACTTGTTTTCTGACCACTTTCT 2600
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msk05209 101 .................................................. 101
sh06588 2601 CTCCCATTTCCTCACTATTCTAAACCCTTACCGCTCACCTCAAGCCCCTC 2650
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msk05209 101 .................................................. 101
sh06588 2651 CCCCTCTCCCATTTCACCCTAGCTTCCTGGAGCACATGGAGGCATCCGGC 2700
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msk05209 101 .................................................. 101
sh06588 2701 AGGGCCCCCTCGACCTGAGGTCCAGCCCTCGTGAACTGATCTGCGGCTGC 2750
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msk05209 101 .................................................. 101
sh06588 2751 ACTCAACCTTCTCGCCAGTCTCAGGATGAGGTGGCCTTGCCCCACCTCAA 2800
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msk05209 101 .................................................. 101
sh06588 2801 AGCCTGCTCCTCCACCTGTGCTCTGGAGCCACCTCTGCCAGCATCGCTGG 2850
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msk05209 101 .................................................. 101
sh06588 2851 GGCCTCACCCCAGCCTCTACCTTGCTCTGCTGGCTCTTGCTCTTCAACCT 2900
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msk05209 101 .................................................. 101
sh06588 2901 AGGAACGTGCCTGAGCTTTTCTCATCTTAAACAAAACAACAATAACAGCA 2950
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msk05209 101 .................................................. 101
sh06588 2951 ACACAAGCAAAATCTCCTTTGACCCTGCATCCCTCTGTTGGGTTATCATC 3000
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msk05209 101 .................................................. 101
sh06588 3001 AGCTTATCATTCCCACCCTTCCCATCAAAACATCTCAAAAGAGTAGTCTA 3050
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msk05209 101 .................................................. 101
sh06588 3051 CACTCAACACTCTCCATTTCCTCACTACCCTCTTACTCCTCAACCTGCTG 3100
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msk05209 101 .................................................. 101
sh06588 3101 CAATTTGACATTCACCCCCAGAGTTGCTTTGACCTCCTAATTACCAAATC 3150
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msk05209 101 .................................................. 101
sh06588 3151 AGTGGGCCCTTGTCAGTCTCTGTGTCTGCTGCATTGATGCTGTTTACCAC 3200
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msk05209 101 .................................................. 101
sh06588 3201 CCCCTCCTCAAAAAATGCCTGTGCTTATTACTAGTTCCTATAAAGTGCTG 3250
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msk05209 101 .................................................. 101
sh06588 3251 AAACCCAAATCTGTCTAGCCCTGGCCCCTCCCCCAAGATTCAGCCTCCTG 3300
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msk05209 101 .................................................. 101
sh06588 3301 TACTCGACTACATGTCAGACATCTCCCCTTGGATGGCCCACAGGCACCTT 3350
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msk05209 101 .................................................. 101
sh06588 3351 ACTGTGACCAAAAGAGAATTGGTCGTCTCAGTCCCCATCTCAACTCTAAA 3400
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msk05209 101 .................................................. 101
sh06588 3401 GTGATCTTCCTCCTCTGTTCCCTATCTCACTTGGTGGCGGCACCATCTAC 3450
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msk05209 101 .................................................. 101
sh06588 3451 CCTGTCCTGTTGACTCTCGAATACTTCCCAAATCTGAGGTTTTGTGTTGC 3500
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msk05209 101 .................................................. 101
sh06588 3501 CGTGTCTACTTCCCTTAGTGTCTCCTTCCCTCTATCAGACTAAGCTTTTC 3550
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msk05209 101 .................................................. 101
sh06588 3551 AAGGGCAAGGACTCTACATCAGCTGTCCGTGCCCTAGCACACCACACAAG 3600
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msk05209 101 .................................................. 101
sh06588 3601 TCTAGGCACCAAACAGGCCTCAGTAAATGTCGTTGAATTGAACCGTGCTC 3650
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msk05209 101 .................................................. 101
sh06588 3651 TGCTCTCTCATTCCCAGCAGTGCTGTCCTTGGTGGGAGCTGACCCAGTGC 3700
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msk05209 101 .................................................. 101
sh06588 3701 CTGGGGAATGAATGAAGTGGGAGTCTGGATGCCAAGACCCTCTTAGTCCC 3750
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msk05209 101 .................................................. 101
sh06588 3751 TGATCCCCCTATTGAGTCCAAAAGTCTTTCTTTAACCCTGATGGCATTTG 3800
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msk05209 101 .................................................. 101
sh06588 3801 GGACACAGAGGTATTTGTAAGGTTTTAAAAGTGGCTTTGTAGACAAAGTC 3850
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msk05209 101 .................................................. 101
sh06588 3851 AGTCAAGGCAAGACTTCCAGGAGTTGGAACTGAACAGCCACATTGCCAGA 3900
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msk05209 101 ...........................................GGAGGAG 107
|||||||
sh06588 3901 TGTGTGCTCCAGACTAGAAGTGATGTGGATGGGTGGGCAATTGGGAGGAG 3950
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msk05209 108 GAAGAAAAGGAGGAGGAAGAGGAAGAGCAGGAGCAGGAAGAA........ 149
| |||||| ||| ||| |||| | |||| | |
sh06588 3951 AACCAAAAGGGCCTGGATGAGTCAGAGTTTCAAGAGGAGGCATTTGAACA 4000
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msk05209 150 ....CACCAGGAGGAAGAA............................... 164
| |||||| |||||
sh06588 4001 ATTCAAGCAGGAGAAAGAATAAAGCAAGTTTCAAAGTCCAGAAGGAACAT 4050
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msk05209 165 .................................................. 165
sh06588 4051 GGCATGTGTATATAATGGGAGGGAGGGAGTGACAAGAGCAGCATGGAGAG 4100
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msk05209 165 .................................................. 165
sh06588 4101 GTTTGGATAGGTGGCCTTCAAGGTACTTTCCAATCCTAAGTGCCTGCAGA 4150
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msk05209 165 .................................................. 165
sh06588 4151 GTGGAAGCTGCTGGTCTCGGAGAAGTCTGGACCACAGAGATCTTCTCCCA 4200
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msk05209 165 .................................................. 165
sh06588 4201 ACCCAAGCATACCAGAGGGATGCGACACATGCCGGCAGTAACAGCGGCTC 4250
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msk05209 165 .................................................. 165
sh06588 4251 ACTTGGCATCTTCAAAGCCATGGGGCAGGGCCTGCCAGACGAGGAGCAGG 4300
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msk05209 165 .................................................. 165
sh06588 4301 AGAAGCTGCTGCGCATCTGTTCCATTTATACCCAGAGTGGAGAAAACAGC 4350
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msk05209 165 .................................................. 165
sh06588 4351 CTGGTGCAGGAGGGCTCTGAGGCCTCCCCCATTGGGAAGTCTCCATATAC 4400
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msk05209 165 .................................................. 165
sh06588 4401 ACTAGACAGCCTGTATTGGAGCGTCAAGCCAGCCAGCTCCAGCTTCGGGT 4450
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msk05209 165 ..............CAGGAGGAGGAGGAGGAGGAAGAGAACCAAAAGGTC 200
||| | |||||||| ||| | | |||
sh06588 4451 CTGAAGCAAAGGCCCAGCAACAGGAGGAGCAGGGCAGTGTTAATGATGTC 4500
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msk05209 201 TTTCAAGATCAGATGGAGGCAGATGTTGAGGAAAGTGATGATGTAGAAGA 250
|||| ||| ||||| | | | || | ||||| ||
sh06588 4501 AAGGAAGAGGAGAAGGAGGAGAAAGAGGTCTTGCCAGACCAGGTAGAGGA 4550
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msk05209 251 AGAGGAAGAAGTAGATG...ATGAAGAAGAAGATGAAGATGATGACTATG 297
||||||||| |||| | || || ||||| || ||||| || |||
sh06588 4551 GGAGGAAGAAAATGATGACCAAGAGGAGGAAGAGGAGGATGAAGATGATG 4600
4601 ----+----*----+----*----+----*----+----*----+----* 4650
msk05209 298 ATGATGATGAAGAAGAAGACAGGATGGAAGTGGGGGCCTTCTCTCTTGCA 347
| ||||||||||| |||||||| ||||| |||||| | |||||| |
sh06588 4601 AAGATGATGAAGAGGAAGACAGAATGGAGGTGGGGCCTTTCTCTACAGGG 4650
4651 ----+----*----+----*----+----*----+----*----+----* 4700
msk05209 348 CAGGGATCCAGTGTTTTTGAGAATACTAGGACCACGTCTCGGAAGAGAGA 397
|| | ||| | |||||| ||||| | | | ||| ||||
sh06588 4651 CAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGG 4700
4701 ----+----*----+----*----+----*----+----*----+----* 4750
msk05209 398 AGCACTGCAGGGTTCAGCATGGCAAGTAAGCTCTGAAGATGTGCGATGGG 447
||| ||||||| || |||||||| || ||||| ||||| ||||||||||
sh06588 4701 AGCTTTGCAGGGCTCTGCATGGCAGGTTAGCTCAGAAGACGTGCGATGGG 4750
4751 ----+----*----+----*----+----*----+----*----+----* 4800
msk05209 448 GTACATTCCCTCTAGGCCGGCTACCAGGCCAGACTGAGGACCCAGCAGAG 497
||||| || |||||||| | ||||| ||||| ||||||||||| ||
sh06588 4751 ACACATTTCCCCTAGGCCGAATGCCAGGTCAGACCGAGGACCCAGC..AG 4798
4801 ----+----*----+----*----+----*----+----*----+----* 4850
msk05209 498 CTTATGCTGGATAATTATGACACCATGTATCTTTTGGACCAACCTGTAAT 547
|| |||||||| ||||||||||||||||||||||||||||| ||||| |
sh06588 4799 CTCATGCTGGAGAATTATGACACCATGTATCTTTTGGACCAGCCTGTGCT 4848
4851 ----+----*----+----*----+----*----+----*----+----* 4900
msk05209 548 AGAGCACCGGCTAGAACCCCAGAAGTCCAAAAGTAGCACTCTGAGCCTAT 597
|||||| ||||| |||||| | | ||| | | ||| || ||||
sh06588 4849 AGAGCAGCGGCTGGAACCCTCAACATGCAAGACTGACACCTTGGGCCTGA 4898
4901 ----+----*----+----*----+----*----+----*----+----* 4950
msk05209 598 GTTGTGGTGGCAGCAATACCAACTCTAGCAGTAGCAGCAGCAGCGGCAAC 647
| ||||||| | ||| | ||||| |||| | |||||||||| |||||
sh06588 4899 GCTGTGGTGTCGGCAGTGGCAACT...GCAGCAACAGCAGCAGCAGCAAC 4945
4951 ----+----*----+----*----+----*----+----*----+----* 5000
msk05209 648 ATGGAGGGCCTTCTCTGGAACCAAGGACAAATGCATGGGCTCAAAGCTGG 697
| |||||||||||||||| ||| || || |||||||||||||| ||||
sh06588 4946 TTCGAGGGCCTTCTCTGGAGCCAGGGGCAGCTGCATGGGCTCAAAACTGG 4995
5001 ----+----*----+----*----+----*----+----*----+----* 5050
msk05209 698 CCTGCAGCTCTTCTGATGGCTGT.CCTGATGCCAGTGTCCATGTAGCTCT 746
|||||||||||||||||||| | |||| ||| ||||| ||| ||| |
sh06588 4996 CCTGCAGCTCTTCTGATGGCCATCCCTGGTGCAAGTGTTCATCCAGCCGT 5045
5051 ----+----*----+----*----+----*----+----*----+----* 5100
msk05209 747 GCCATTGGCACAGCTCAGTCCAGAATCCACCCATGGTACAGACTG.GACA 795
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sh06588 5046 GCCAGGGCAACAGCCCACCCCCTAGTACAAC..TGATGCTCCCTGAGACA 5093
5101 ----+----*----+----*----+----*----+----*----+----* 5150
msk05209 796 ACCTGAGAGACA.....GATCAGCCTTATTAATTCAGCTTTTTACCACAA 840
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sh06588 5094 ACCTGGGAGACAGCCTGGATCAGCCACATCAACTCAGTTGTCCACCACAG 5143
5151 ----+----*----+----*----+----*----+----*----+----* 5200
msk05209 841 TGGAAATCTGAATGATTTTTCCCCCGTTTTCTGTTGTGTTTTGAAAAATA 890
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sh06588 5144 GGGAATTTTGAATGTCTTTT......GTTTTTGTTTTGTTTTGAAAAATA 5187
5201 ----+----*----+----*- 5221
msk05209 891 ATAAACAGATTTTTGTCATGG 911
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sh06588 5188 ATAAACAGGCAACTGT..... 5203