FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00108.ptfa, 289 aa vs ./tmplib.26680 library 1768728 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.8404+/-0.00454; mu= 13.8482+/- 0.304 mean_var=100.2851+/-23.840, 0's: 0 Z-trim: 5 B-trim: 5 in 1/35 Lambda= 0.1281 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0762 ( 729 res) mbg11441 ( 729) 587 119 9.6e-28 mKIAA1679 ( 1608 res) meh02165 (1608) 188 45 2.4e-05 mKIAA0960 ( 1668 res) mbg08685 (1668) 172 42 0.00019 >>mKIAA0762 ( 729 res) mbg11441 (729 aa) initn: 603 init1: 152 opt: 587 Z-score: 590.5 bits: 118.5 E(): 9.6e-28 Smith-Waterman score: 587; 35.354% identity (37.634% ungapped) in 297 aa overlap (1-288:206-493) 10 20 30 mFLJ00 YSITFIGKWSQTAFPKQYPLFRPPAQWSSL : .:: :.::. . ::.:: : .::.. mKIAA0 LTKKLCEQDPTLDGVTDKPILDCCACGTAKYRLTFYGNWSEKTHPKDYP--RRANHWSAI 180 190 200 210 220 230 40 50 60 70 80 mFLJ00 LGAAHSSDYSMWRKNEYVSNGLRDFAERGEAWALMKEI-EAAGEKLQSVHAVFSAPAI-P .:..::..: .:. . :.:.:... :: : . .:: . . : : ..: . :: : mKIAA0 IGGSHSKNYVLWEYGGYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKAKAQWPAWQP 240 250 260 270 280 290 90 100 110 120 130 140 mFLJ00 SGT-GQTSTELEVHPRHSLVSFVVRIVPSPDWFVGIDSLDLC--EGGRWKEQVVLDLYPH .. . :.:. : . :.::.. . ::::: ::... ::: : : : ..:: :: : mKIAA0 VNVRAAPSAEFSVDRTRHLMSFLTMMGPSPDWNVGLSAEDLCTKECG-WVQKVVQDLIPW 300 310 320 330 340 350 150 160 170 180 190 200 mFLJ00 DAGTDSGFTFSSPNFATIPQDTVTEITASSPSHPANSFYYPRLKSLPPIAKVTFVRLQQS ::::::: :. ::: ::::. . .: : .:: . :: :. :. .:.:.. :. .. mKIAA0 DAGTDSGVTYESPNKPTIPQEKIRPLT--SLDHPQSPFYDPEGGSITQVARVVIERIARK 360 370 380 390 400 410 210 220 230 240 250 260 mFLJ00 PR--AFAPPSLD--LASRGNEIVDSLSVPETPLDCEVSLWSSWGLCGGPCGKLGAKSRTR . ..: ..: .:. . : : ..::: : : :: :. :.. . : . : : mKIAA0 GEQCNIVPDNVDDIVADLAPEEKDEDDTPET---CIYSNWSPWSACSSSTCEKGKRMRQR 420 430 440 450 460 270 280 mFLJ00 YVRVQPANNGTPCPELEEEAECAPDNCV ....: . ..:::. .. : .: mKIAA0 MLKAQ-LDLSVPCPDTQDFQPCMGPGCSDEGQETDTPGRLETDTPRAKIKPNKRCLFSVP 470 480 490 500 510 520 >>mKIAA1679 ( 1608 res) meh02165 (1608 aa) initn: 152 init1: 113 opt: 188 Z-score: 188.2 bits: 45.2 E(): 2.4e-05 Smith-Waterman score: 188; 33.824% identity (34.848% ungapped) in 68 aa overlap (211-278:979-1044) 190 200 210 220 230 240 mFLJ00 NSFYYPRLKSLPPIAKVTFVRLQQSPRAFAPPSLDLASRGNEIVDSLSVPETPLDCEVSL : . .. . .. : .. .: :.::..: mKIAA1 QGGLWVQGDDKECGEGVRFRAIACSNINGRPVDPSFCNSSGYIQEACVIP-CPFDCKLSD 950 960 970 980 990 1000 250 260 270 280 mFLJ00 WSSWGLCGGPCGKLGAKSRTRYVRVQPANNGTPCPELEEEAECAPDNCV ::::: :.. :: .:.. :..... .: ..: :::.:. mKIAA1 WSSWGSCSSSCG-IGVRIRSKWLKEKPYSGGRPCPKLDLKNQVHEAVPCYSECDQYSWVV 1010 1020 1030 1040 1050 1060 mKIAA1 EHWSPCKINNELRSPRCGRGTQSRRIRCVSTADREGGAVNRSLCNQDDAPQETQACSLLC 1070 1080 1090 1100 1110 1120 >>mKIAA0960 ( 1668 res) mbg08685 (1668 aa) initn: 398 init1: 127 opt: 172 Z-score: 172.1 bits: 42.3 E(): 0.00019 Smith-Waterman score: 181; 44.000% identity (45.833% ungapped) in 50 aa overlap (229-278:1042-1089) 200 210 220 230 240 250 mFLJ00 FVRLQQSPRAFAPPSLDLASRGNEIVDSLSVPETPLDCEVSLWSSWGLCGGPCGKLGAKS .: : ::..: ::.:. :. ::. :.: mKIAA0 YQAMACYDQNGRLVETSRCNSHGYIEEACIIP-CPSDCKLSEWSNWSRCSKSCGS-GVKV 1020 1030 1040 1050 1060 260 270 280 mFLJ00 RTRYVRVQPANNGTPCPELEEEAECAPDNCV :....: .: :.: :::.:.. mKIAA0 RSKWLREKPYNGGRPCPKLDHVNQAQVYEVVPCHSDCNQYIWVTEPWSVCKVTFVDMRDN 1070 1080 1090 1100 1110 1120 289 residues in 1 query sequences 1768728 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:06:57 2006 done: Mon Mar 27 10:06:58 2006 Scan time: 0.510 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]