Comparison of KIAA cDNA sequences between mouse and human (FLJ00108)
<<Original sequence data>>
mouse mFLJ00108 (msk03256) length: 1404 bp, CDS: 1 - 870
human (as00108) length: 4292 bp, CDS: 3 - 653
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 16 - 17 0 2 100.0
CDS: 18 - 658 232 285 55.1
3'UTR: 659 - 4326 542 326 37.6
amino acid
CDS: 18 - 658 33 179 84.4
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
Q H H F H W Q V E P -
msk03256 1 ...............TACAGCATCACTTTCATTGGCAAGTGGAGCCAG.A 34
||| | | || | || || | |
as00108 1 CGTCGGCGGAGCTGGAGGTGCAGCGCAGGCACTCGCTGGTCTCGTTTGTG 50
S A E L E V Q R R H S L V S F V
51 ----+----*----+----*----+----*----+----*----+----* 100
Q H F P S S T P C S G P L H - V
msk03256 35 CAGCATTTCCCAAGCAGTACCCCCTGTTCCGGCCCCCTGCACAG..TGGT 82
|| || ||| || ||| | || | || |||| |||
as00108 51 GTGCGCATCGTGCCCAGCCCCGACTGGTTCGTGGGCGTGGACAGCCTGGA 100
V R I V P S P D W F V G V D S L D
101 ----+----*----+----*----+----*----+----*----+----* 150
L S A G G S S Q
msk03256 83 CCTCTCTGCTGGGGGCAGCTCACAG......................... 107
||| | | |||| | | | | |
as00108 101 CCTGTGCGACGGGGACCGTTGGCGGGAACAGGCGGCGCTGGACCTGTACC 150
L C D G D R W R E Q A A L D L Y P
151 ----+----*----+----*----+----*----+----*----+----* 200
S D
msk03256 108 ...........................................CTCTGAC 114
| |
as00108 151 CCTACGACGCCGGGACGGACAGCGGCTTCACCTTCTCCTCCCCCAACTTC 200
Y D A G T D S G F T F S S P N F
201 ----+----*----+----*----+----*----+----*----+----* 250
Y S M W R K N E Y V S N G L R D F
msk03256 115 TACAGCATGTGGCGGAAGAATGAGTATGTCAGCAATGGGCTGAGGGACTT 164
|| ||| || | | | | | | | ||||| | |
as00108 201 GCCACCATCCCGCAGGACACGGTGACCGAGGTGAGTGGGCACCCCGCGTG 250
A T I P Q D T V T E V S G H P A C
251 ----+----*----+----*----+----*----+----*----+----* 300
A E R G E A W A L M K E I E A -
msk03256 165 TGCTGAGCGTGGTGAGGCCTGGGCACTGATGAAGGAGATCGAAGCTG... 211
|| | | | |||| || || || || | | | |||
as00108 251 CGCAAGGGCCGCTATGGCCCCCGCGGTGGGGACGGGGCTGGGGCCTGGCT 300
A R A A M A P A V G T G L G P G C
301 ----+----*----+----*----+----*----+----*----+----* 350
R R E T - R V C T Q
msk03256 212 ...................CAGGAGAGAAACTT.CAGAGTGTGCACGCAG 241
||||| || ||| | | | || | |
as00108 301 GCACCCTCGCCTCCCAGCCCAGGACAGCCGCTTGCGGCTTTTGTGTGGAA 350
T L A S Q P R T A A C G F C V E
351 ----+----*----+----*----+----*----+----*----+----* 400
C S Q L L P S L A V P G R L P Q S
msk03256 242 TGTTCTCAGCTCCTGCCATCCCTAGCGGTACCGGGCAGACTTCCACAGAG 291
||| ||| || | | || | ||| | ||
as00108 351 GAGGCTCTGCTTCTAGCGCCAGCAGTGAGCAAGGGGGTGCAGCCCTCCCA 400
E A L L L A P A V S K G V Q P S H
401 ----+----*----+----*----+----*----+----*----+----* 450
* R C T L - T R W C P S W Y A
msk03256 292 TTAGAGGTGCACCCTAG......GCACTCGCTGGTGTCCTTCGTGGTACG 335
| |||| | |||| || | | || | ||
as00108 401 TACTCTCCCAACCCGGGGTCACAGCACCGCAGGGAGGACAGCGGGACGCG 450
T L P T R G H S T A G R T A G R A
451 ----+----*----+----*----+----*----+----*----+----* 500
S P A L T G L W A S T V W T C
msk03256 336 CATTGTCCCCAGCCCTGACTGGTTTGTGGGCATCGACAGTCTGGACCTGT 385
| ||||| || || ||| ||| | | | |||
as00108 451 C...GTCCCGAGGAGGCCGCCCCTTCCTGGCCTCGGTTTCCAGCCCGTGT 497
S R G G R P F L A S V S S P C
501 ----+----*----+----*----+----*----+----*----+----* 550
* G R P L E G A G G P G S L S T R
msk03256 386 GTGAGGGAGGCCGCTGGAAGGAGCAGGTGGTCCTGGATCTTTATCCACAC 435
| | | | |||| ||||| | ||| | || | |
as00108 498 .TCCGTGGGATGGCTGAGAGGAGTACATGGGACCCTGTCCCCAACAGTGG 546
S V G W L R G V H G T L S P T V V
551 ----+----*----+----*----+----*----+----*----+----* 600
C R D R Q W F H L L P P N F A T
msk03256 436 GATGCAGGGACCGACAGTGGTTTCACCTTCTCCTCCCCTAACTTTGCAAC 485
|||| || | | | | | || || | | |
as00108 547 TGCAGAGGGTACGCTGGACGCTGGGCAGTGGCC.CCAGTGAGGCCATACG 595
Q R V R W T L G S G P S E A I R
601 ----+----*----+----*----+----*----+----*----+----* 650
I P Q D T - L
msk03256 486 TATCCCACAAGACACAGT.............................GAC 506
|| ||| ||| | |
as00108 596 CATACCAGAAGGTGGGCTTCTCGGACCCCAGGCCAACCTCTTCTTCCTCC 645
I P E G G L L G P Q A N L F F L P
651 ----+----*----+----*----+----*----+----*----+----* 700
R *
msk03256 507 TGAGATAACAGCCTCATCGCCCAGCCACCCAGCAAATTCATTCTACTACC 556
||||||| |||| || ||||||||||| || || || ||||||||||
as00108 646 CCAGATAACGTCCTCCTCTCCCAGCCACCCGGCCAACTCCTTCTACTACC 695
R *
701 ----+----*----+----*----+----*----+----*----+----* 750
msk03256 557 CACGCCTCAAGTCCTTACCTCCCATCGCCAAAGTGACCTTCGTGCGGCTA 606
| || || ||| || | ||||||||||||| ||||| | ||||||||
as00108 696 CGCGGCTGAAGGCCCTGCCTCCCATCGCCAGGGTGACACTGGTGCGGCTG 745
751 ----+----*----+----*----+----*----+----*----+----* 800
msk03256 607 CAGCAGAGTCCCAGGGCCTTTGCCCCACCTTCCCTGGACCTGGCCAGCCG 656
| ||||| ||||||||||| ||| || ||| | |||| ||||| |
as00108 746 CGACAGAGCCCCAGGGCCTTCATCCCTCCCGCCCCAGTCCTGCCCAGCAG 795
801 ----+----*----+----*----+----*----+----*----+----* 850
msk03256 657 AGGCAACGAAATCGTTGACAGC............................ 678
| ||| || || || ||||||
as00108 796 GGACAATGAGATTGTAGACAGCGCCTCAGGTAACGGACATACAGGTCACA 845
851 ----+----*----+----*----+----*----+----*----+----* 900
msk03256 679 .................................................. 679
as00108 846 TGGGACACACAGCAGCCCCGAACCCTGCCACAGGGCGACCACCAAACCCG 895
901 ----+----*----+----*----+----*----+----*----+----* 950
msk03256 679 .................................................. 679
as00108 896 AACCTAAGGCTCTGAGAAATTCCAAGTAGGGATTCGTAGTGCGTACTGCA 945
951 ----+----*----+----*----+----*----+----*----+----* 1000
msk03256 679 .................................................. 679
as00108 946 AGATGGTGCTTAGAAGATTTAGGATTCTGTTGATTCACACACTGAAGATG 995
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msk03256 679 .................................................. 679
as00108 996 TGACTCTTGCACATTATTTGCAGTTGAAAGCATCTTACAGGGCCACAGCC 1045
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msk03256 679 .................................................. 679
as00108 1046 CAGAGGAAAGAATGAAAGGAGGCTCCAGACAGTACCTGAGAGACTCTGTC 1095
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msk03256 679 .................................................. 679
as00108 1096 CTGTCAGACACGCACCCACAGGTGACCTGTGTGTCACAGCTGACAAGGAA 1145
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msk03256 679 .................................................. 679
as00108 1146 GCTTGCTAGGATGGCCCTGTGTGGCCACCGGGTGACAGCTATGCTGCAGG 1195
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msk03256 679 .................................................. 679
as00108 1196 GCACCTGTGGGGGTCTCGGGACCCAGCCACCACACAGCTCGGGGCTCTGC 1245
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msk03256 679 .................................................. 679
as00108 1246 TCACAGGCGCCTTGGCCTGGGGCGGGGCAGGTGCTGGTGAGCATTCTCCT 1295
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msk03256 679 .................................................. 679
as00108 1296 AGCTCTTCCAGGCACCTGCTGGACAGGGCAGGCTGGGAACGCTGGGGCCA 1345
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msk03256 679 .................................................. 679
as00108 1346 AGTGGCAGTTCCCTCCCTGCTCAGCTGGGTGGCAGCCACTGGCCTCACGG 1395
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msk03256 679 .................................................. 679
as00108 1396 AGCGCCTGTGGTCTGGAGCGCATTGCTGGGTCGTGGGTCAGGGCCTGTTG 1445
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msk03256 679 .................................................. 679
as00108 1446 GCTCTGGGTCTCTGGGTCTCACCTGATATGGGTGTGGGACAGTCAGTGTA 1495
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msk03256 679 .................................................. 679
as00108 1496 GGCCCCAGACAACAGCGGACTTCAGACTTTCCCGAGGAGGAACTGGAGCC 1545
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msk03256 679 .................................................. 679
as00108 1546 CACCAACCTGGCCATGGGCCCCGTCGTCCTCCACCCTCCATGTTGCTGGC 1595
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msk03256 679 .................................................. 679
as00108 1596 TGGAGTTGAGGCAGGTACGGGGCCGCCCCACACCTGCCCCCCAAGCCATG 1645
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msk03256 679 .................................................. 679
as00108 1646 TGGTAGGGACAGATGTCGTCTTGAGGAGCAGCAGTAATTACAAGCTTACT 1695
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msk03256 679 .................................................. 679
as00108 1696 GTCAGCCGTCCCTGGAAGCAAGGGCCAGGTCAGGTCAGACAGGAGGCCGC 1745
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msk03256 679 .................................................. 679
as00108 1746 CTGGCTGGCGGGAACCACTCCCCAGACAGAGACTGTGCCCAGTCCTGGGT 1795
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msk03256 679 .................................................. 679
as00108 1796 CCCTCCTCATTTGGGATGAACTGGGCCTCCCTGTGCCAGCCTCGGTGCTG 1845
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msk03256 679 .................................................. 679
as00108 1846 CCCCTGCCCAGTGCAGGCTTGGGCTCCTCACTCATTTGTCCACGCGGATG 1895
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msk03256 679 .................................................. 679
as00108 1896 CCCCATTCCAAGCAGATGTCCCCGAGCCACTTACCCAACAGGCAGACGTG 1945
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msk03256 679 .................................................. 679
as00108 1946 CCAGCACTGTCCGTGGTGTGCAACTGGTCTGGCGGGAAGAGCCCCTCGTG 1995
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msk03256 679 .................................................. 679
as00108 1996 GGCAGAGGGTCCAGAGAGGTGCGGTTTGCCCCACATTTGGGGGCACTGGG 2045
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msk03256 679 .................................................. 679
as00108 2046 CCACAGTGGGCAGGGGAGCACGTGGCCAGTGCCCTGGGCTAGGAGAGGGA 2095
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msk03256 679 .................................................. 679
as00108 2096 TAAAGTCAGCTGTGGCCAAGCAGAAGCAGTATTGCAGGGGAAGGGTGGGG 2145
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msk03256 679 .................................................. 679
as00108 2146 AGAGACTGTGCTATGAGCTCTGAGCAGGAGGCAGGACATGGAGAGAAGGG 2195
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msk03256 679 .................................................. 679
as00108 2196 TGGGAGACGGACAGAGCCAGCTGTGCCAGCCGAGGGACCAGAGTGGGCAG 2245
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msk03256 679 .................................................. 679
as00108 2246 TGGGGACGGAGCACAGACCACCGCCCACAAGGGTCTCTCCTGTGACTTCT 2295
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msk03256 679 .................................................. 679
as00108 2296 GGCTTCCCGAGGGCAGAGGCTGGGATGGGCATGTGGCGGCTGGCACCCAG 2345
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msk03256 679 .................................................. 679
as00108 2346 GAGGCTCCGCCAGGTCCACGCCAAGCCAGCCTGGCTCAGCTCTGGCTTCC 2395
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msk03256 679 .................................................. 679
as00108 2396 TGCTCACACGCTGGATGCCTGTCCCCAGGCCTCCTGACAGGGCTCTGCAG 2445
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msk03256 679 .................................................. 679
as00108 2446 CATTGGAGAGGCTTGTGGTGGGGCCCTCGCTGTAGAACAGGCACTGCCAG 2495
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msk03256 679 .................................................. 679
as00108 2496 TGCTCACTGACTCCTCATTGCAGCCAGGGCAGGGGCGCTCCCACCACCTC 2545
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msk03256 679 .................................................. 679
as00108 2546 GGTTTCAGTCAGGAAGCTGGGGGGTGCTGGGATCTGCCAGCAGCTCTGTG 2595
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msk03256 679 .................................................. 679
as00108 2596 TGCTCCCCAGGTGGGCTGCCCGGGGCCCTGGCTCTCTGGCTTCTACACCA 2645
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msk03256 679 .................................................. 679
as00108 2646 GTGCCCCTGCGAAGCCTCAGCGCCCAAGGTCTTTGCAAGCCCTGTTCCTG 2695
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msk03256 679 .................................................. 679
as00108 2696 CATCTCTGGAGAGGGCTGCTCCAGGTGTGGGCCTGGCCAGGGCTTCCAGA 2745
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msk03256 679 .................................................. 679
as00108 2746 CCAGTCCAGGCACTGCACCTGCACATTGACCCCCTTCTCCACTCTCTCTC 2795
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msk03256 679 .................................................. 679
as00108 2796 ATCCTTCAGTAGCCACAAAGCTGGCAGCAGGGTACTCGCAGATTTGTGAG 2845
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msk03256 679 .................................................. 679
as00108 2846 GAGAGCCGAGCCCTTGCTGACTGTCCTCCCGTGCACGGCAGAGTGAGGCG 2895
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msk03256 679 .................................................. 679
as00108 2896 GGGCTCCTGGCCTCCTTAGGGGCTGCCCGCTCTGGGCCACACAGCCAGAG 2945
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msk03256 679 .................................................. 679
as00108 2946 AAACACTGTCCATCTGGCTGGCTTGGCCTGTGGGGTGCAAAAGAGGTGTT 2995
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msk03256 679 .................................................. 679
as00108 2996 TTCACTTTGCTTTGGAAACATGGAAATTACCAAGTGACTTAACCATAACA 3045
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msk03256 679 .................................................. 679
as00108 3046 CCAAATGATGATTTTTAAATTTATGAAAATTATGGAACCAGATGGGACAC 3095
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msk03256 679 .................................................. 679
as00108 3096 AGGGAAACGAGAACGATACTGAAAAGGTCTGAGTCCTGTGGGGGGCTCCA 3145
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msk03256 679 .................................................. 679
as00108 3146 GGTCCCGCAAGACAGCTAATCAGGTGCCCCTGTCTGTTATTCGGGTAAAT 3195
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msk03256 679 .................................................. 679
as00108 3196 GTAGCAGCTGGGTCCAGGCTCGGGCAGAGCAGCTTTCTACAGCAGGGGTG 3245
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msk03256 679 .................................................. 679
as00108 3246 TCCGCCCTCTCCCGGGGTTCCCACGGGGTTCCCAGGGGCCTCTTACTCTG 3295
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msk03256 679 .................................................. 679
as00108 3296 CCACGATGTGGGAGTTCCACCACCACAGGGACTTGAGCGGCAGCTCCGGC 3345
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msk03256 679 .................................................. 679
as00108 3346 TCTTACGTAGAAACGCGCAACTCCAGTCCCTAGGTTGTGTCCGAGGTTGC 3395
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msk03256 679 .................................................. 679
as00108 3396 TATGGTGCCATCCCATCTTGCCGCTCACTCTGCGACTGTGCGGAGAAACG 3445
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msk03256 679 .................................................. 679
as00108 3446 CAAGTGCCCCCGAAGGGTGGGCGTGGCCTCTGATGAATGCACACGTTGGT 3495
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msk03256 679 .................................................. 679
as00108 3496 GGGAGGTGGCTTCCGTTTGTACGAAGCGCCTCTTCACGCAAGCGTTCACC 3545
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msk03256 679 ..................CTTTCAGTTCCAGAGACACCGCTGGACTGTGA 710
| |||||||||| || ||||||||||| ||
as00108 3546 TCGGTCTCCCCTTTGCTTGGTCCAGTTCCAGAAACGCCGCTGGACTGCGA 3595
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msk03256 711 GGTTTCCCTGTGGTCATCCTGGGGACTGTGTGGAGGACCATGTGGAAAGT 760
||| ||||||||||| |||||||||||||| ||||| | ||||| | |
as00108 3596 GGTCTCCCTGTGGTCGTCCTGGGGACTGTGCGGAGGCCACTGTGGGAGGC 3645
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msk03256 761 TGGGAGCCAAGAGCAGAACTCGCTATGTCCGTGTTCAGCCTGCTAACAAT 810
| || |||||||||| |||||||| ||||| || ||||| || |||||
as00108 3646 TCGGGACCAAGAGCAGGACTCGCTACGTCCGGGTCCAGCCCGCCAACAAC 3695
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msk03256 811 GGGACTCCCTGTCCCGAGCTTGAAGAAGAGGCCGAGTGTGCCCCAGATAA 860
|||| ||||| |||||||| ||||||||||| ||||| | ||| |||||
as00108 3696 GGGAGCCCCTGCCCCGAGCTCGAAGAAGAGGCTGAGTGCGTCCCTGATAA 3745
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msk03256 861 CTGCGTCTAAACCCAGACTCCAGTAGCAAGCAGCTCTTAGGATCCCTCAA 910
|||||||||| ||||| || | ||| | || || ||| |
as00108 3746 CTGCGTCTAAGACCAGAGCCCCGCAGC......CCCTGGGGCCCCCCGGA 3789
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msk03256 911 GGCTGGGACTCAGATCTGGGCCACAAGGTGTTTCCACAGGAGTCCCATGC 960
| | || | || | ||| | || | |||||
as00108 3790 GCCATGGGGT.............GTCGGGGGCTCCTGTGCAGGCTCATGC 3826
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msk03256 961 AGGCAGGGATGGAGAGCGTGGGCAGTTTTGCACCGTTTCCCACC.....A 1005
| | | ||| || || |||| || | | | | |||
as00108 3827 TGCAGGCGGCCGAGGGCACAGGGGGTTTCGCGCTGCTCCTGACCGCGGTG 3876
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msk03256 1006 ATCCTGGGCTGACAGAGGTCTTCACCCAGAGGACCGC.AGTGGCAGG... 1051
| | | || ||| | ||| ||| | || || | ||||| ||
as00108 3877 AGGCCGCGCCGAC.CATCTCTGCACTGAAGGGCCCTCTGGTGGCCGGCAC 3925
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msk03256 1052 ......TAAGCCACAGACTGCCTCTCCCACTGTGTGACTCCT..GAGGCT 1093
| | |||| || | || | | | || || | |||
as00108 3926 GGGCATTGGGAAACAGCCTCCTCCTTTCCCAACCTTGCTTCTTAGGGGCC 3975
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msk03256 1094 CGTGGGTTTGATCTACATAAATTCCCTT............GTAATTTATT 1131
| | || ||| | | | | | || | ||
as00108 3976 CCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCTGCAGGATAAAGTCATC 4025
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msk03256 1132 ACTGTGGTGGGAGGGAGGCTGCCTTTGATACAGAGAGCAGGCATGCCAGG 1181
| || || | || || | | || || | |
as00108 4026 CCCAAGGCTCCAGCTACTCTAAATTATGTCTCCTTATAAGTTATTGCTGC 4075
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msk03256 1182 AACAGCTGAGAGGATGCTCTAAGCCTGTGAACCCCACAACTACACTGCTG 1231
||| |||| | || | | || | || |
as00108 4076 TCCAG..GAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCACGTGGTT 4123
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msk03256 1232 TCAGATACCTCAGACCTGCTGCCACCACATGTGCCAGGGAGTCAACCTTC 1281
||||||||||||||||| ||| ||||| |
as00108 4124 GCAGATACCTCAGACCTGGTGCTCTAGGCTGTGCTGAG............ 4161
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msk03256 1282 ACACCACTCCTGTGCCCACAT...GGGGGTGACCACAGGAGGAACAAACG 1328
| | |||| | | | ||| | || | |||| ||| | ||
as00108 4162 CCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAA.T 4210
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msk03256 1329 AAGAGGGGCAGTTTTTCGAAACTTGGCCCTTGTGTGTCGTTGATCCCCTT 1378
|| ||||| |||| | | | || ||| | |||| | |
as00108 4211 AAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCT 4260
4301 ----+----*----+----*----+----*-- 4332
msk03256 1379 GCATTCGAATAAAGGTCGTGTTCCTG...... 1404
|| || |||||||| | | |
as00108 4261 GCGTTTGAATAAAGACTATCTCTGTTGCTCAC 4292