# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msk03217.fasta.nr -Q ../query/mFLJ00338.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mFLJ00338, 243 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7921082 sequences
Expectation_n fit: rho(ln(x))= 4.8635+/-0.000182; mu= 10.3644+/- 0.010
mean_var=70.7483+/-13.670, 0's: 44 Z-trim: 45 B-trim: 0 in 0/66
Lambda= 0.152481
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|60359830|dbj|BAD90134.1| mFLJ00338 protein [Mus ( 243) 1606 361.8 5.6e-98
gi|26327581|dbj|BAC27534.1| unnamed protein produc ( 251) 1588 357.9 9e-97
gi|81906035|sp|Q9DAU1.1|CNPY3_MOUSE RecName: Full= ( 276) 1588 357.9 9.6e-97
gi|149069416|gb|EDM18857.1| rCG43420, isoform CRA_ ( 276) 1493 337.0 1.9e-90
gi|187469175|gb|AAI66762.1| Cnpy3 protein [Rattus ( 276) 1488 335.9 4e-90
gi|73972976|ref|XP_851722.1| PREDICTED: similar to ( 279) 1430 323.2 2.8e-86
gi|74752319|sp|Q9BT09.1|CNPY3_HUMAN RecName: Full= ( 278) 1429 322.9 3.3e-86
gi|114607481|ref|XP_518480.2| PREDICTED: trinucleo ( 278) 1429 322.9 3.3e-86
gi|119624518|gb|EAX04113.1| trinucleotide repeat c ( 278) 1427 322.5 4.5e-86
gi|166216082|sp|A5GFQ5.1|CNPY3_PIG RecName: Full=P ( 283) 1423 321.6 8.3e-86
gi|149732538|ref|XP_001501575.1| PREDICTED: simila ( 283) 1422 321.4 9.7e-86
gi|122133327|sp|Q0P5N1.1|CNPY3_BOVIN RecName: Full ( 282) 1421 321.2 1.1e-85
gi|119624524|gb|EAX04119.1| trinucleotide repeat c ( 272) 1359 307.5 1.4e-81
gi|126310033|ref|XP_001363829.1| PREDICTED: hypoth ( 279) 1350 305.6 5.6e-81
gi|197127244|gb|ACH43742.1| putative trinucleotide ( 255) 1246 282.6 4e-74
gi|197127245|gb|ACH43743.1| putative trinucleotide ( 255) 1241 281.5 8.7e-74
gi|26349919|dbj|BAC38599.1| unnamed protein produc ( 172) 1133 257.6 9.2e-67
gi|114607483|ref|XP_001135570.1| PREDICTED: trinuc ( 253) 1116 254.0 1.6e-65
gi|119624519|gb|EAX04114.1| trinucleotide repeat c ( 208) 1097 249.8 2.6e-64
gi|119624516|gb|EAX04111.1| trinucleotide repeat c ( 189) 1081 246.2 2.7e-63
gi|119624521|gb|EAX04116.1| trinucleotide repeat c ( 311) 1079 246.0 5.4e-63
gi|119624525|gb|EAX04120.1| trinucleotide repeat c ( 332) 1079 246.0 5.6e-63
gi|148691592|gb|EDL23539.1| trinucleotide repeat c ( 172) 1015 231.7 6e-59
gi|118087769|ref|XP_001232829.1| PREDICTED: simila ( 531) 1020 233.2 6.4e-59
gi|166216084|sp|Q6GN40.2|CNPY3_XENLA RecName: Full ( 243) 999 228.3 8.9e-58
gi|49118649|gb|AAH73680.1| Cnpy3 protein [Xenopus ( 258) 999 228.3 9.3e-58
gi|26349663|dbj|BAC38471.1| unnamed protein produc ( 151) 996 227.5 9.9e-58
gi|86355183|dbj|BAE78826.1| Canopy3 [Danio rerio] ( 276) 998 228.1 1.1e-57
gi|166216085|sp|Q5HZV5.2|CNPY3_XENTR RecName: Full ( 242) 996 227.6 1.4e-57
gi|166216081|sp|A3KNS2.1|CNPY3_DANRE RecName: Full ( 276) 996 227.7 1.5e-57
gi|57032832|gb|AAH88872.1| Tnrc5-prov protein [Xen ( 277) 996 227.7 1.5e-57
gi|165971385|gb|AAI58507.1| Tnrc5 protein [Xenopus ( 302) 996 227.7 1.6e-57
gi|53733772|gb|AAH83297.1| Tnrc5 protein [Danio re ( 212) 971 222.1 5.7e-56
gi|148691589|gb|EDL23536.1| trinucleotide repeat c ( 263) 958 219.3 4.9e-55
gi|149069415|gb|EDM18856.1| rCG43420, isoform CRA_ ( 192) 940 215.2 6e-54
gi|149069417|gb|EDM18858.1| rCG43420, isoform CRA_ ( 152) 920 210.7 1.1e-52
gi|119624522|gb|EAX04117.1| trinucleotide repeat c ( 153) 867 199.1 3.5e-49
gi|148691590|gb|EDL23537.1| trinucleotide repeat c ( 164) 851 195.6 4.2e-48
gi|149069418|gb|EDM18859.1| rCG43420, isoform CRA_ ( 177) 832 191.4 8e-47
gi|224047327|ref|XP_002195565.1| PREDICTED: simila ( 414) 782 180.8 3.1e-43
gi|38196971|gb|AAH22093.3| CNPY3 protein [Homo sap ( 136) 760 175.5 3.9e-42
gi|221221156|gb|ACM09239.1| canopy homolog 3 precu ( 177) 756 174.7 8.7e-42
gi|149641503|ref|XP_001508790.1| PREDICTED: simila ( 588) 739 171.4 2.8e-40
gi|210103358|gb|EEA51394.1| hypothetical protein B ( 278) 697 161.9 9.8e-38
gi|223648698|gb|ACN11107.1| canopy 4 precursor [Sa ( 219) 691 160.5 2e-37
gi|123894796|sp|Q2L6K8.1|CNPY4_DANRE RecName: Full ( 217) 665 154.8 1.1e-35
gi|189514441|ref|XP_001922813.1| PREDICTED: simila ( 149) 662 154.0 1.3e-35
gi|47215377|emb|CAG02193.1| unnamed protein produc ( 251) 658 153.3 3.5e-35
gi|198426683|ref|XP_002129613.1| PREDICTED: simila ( 243) 654 152.4 6.2e-35
gi|73958028|ref|XP_546963.2| PREDICTED: similar to ( 241) 644 150.2 2.8e-34
>>gi|60359830|dbj|BAD90134.1| mFLJ00338 protein [Mus mus (243 aa)
initn: 1606 init1: 1606 opt: 1606 Z-score: 1915.3 bits: 361.8 E(): 5.6e-98
Smith-Waterman score: 1606; 100.000% identity (100.000% similar) in 243 aa overlap (1-243:1-243)
10 20 30 40 50 60
mFLJ00 AGAEETDWVRLPSKCEVCKYVAVELKSAFEETGKTKEVIDTGYGILDGKGSGVKYTKSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 AGAEETDWVRLPSKCEVCKYVAVELKSAFEETGKTKEVIDTGYGILDGKGSGVKYTKSDL
10 20 30 40 50 60
70 80 90 100 110 120
mFLJ00 RLIEVTETICKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVMDIPYELWNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 RLIEVTETICKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVMDIPYELWNE
70 80 90 100 110 120
130 140 150 160 170 180
mFLJ00 TSAEVADLKKQCDVLVEEFEEVIEDWYRNHQEEDLTEFLCANHVLKGKDTSCLAERWSGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 TSAEVADLKKQCDVLVEEFEEVIEDWYRNHQEEDLTEFLCANHVLKGKDTSCLAERWSGK
130 140 150 160 170 180
190 200 210 220 230 240
mFLJ00 KGDIASLGGKKSKKKRSGVKGSSSGSSKQRKELGGLGEDANAEEEEEGVQKASPLPHSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 KGDIASLGGKKSKKKRSGVKGSSSGSSKQRKELGGLGEDANAEEEEEGVQKASPLPHSPP
190 200 210 220 230 240
mFLJ00 DEL
:::
gi|603 DEL
>>gi|26327581|dbj|BAC27534.1| unnamed protein product [M (251 aa)
initn: 1485 init1: 1485 opt: 1588 Z-score: 1893.7 bits: 357.9 E(): 9e-97
Smith-Waterman score: 1588; 99.588% identity (99.588% similar) in 243 aa overlap (1-243:10-251)
10 20 30 40 50
mFLJ00 AGAEETDWVRLPSKCEVCKYVAVELKSAFEETGKTKEVIDTGYGILDGKGS
:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 PAPKLGPSPAGAEETDWVRLPSKCEVCKYVAVELKSAFEETGKTKEVIDTGYGILDGKGS
10 20 30 40 50 60
60 70 80 90 100 110
mFLJ00 GVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 GVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVM
70 80 90 100 110 120
120 130 140 150 160 170
mFLJ00 DIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNHQEEDLTEFLCANHVLKGKDTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 DIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNHQEEDLTEFLCANHVLKGKDTS
130 140 150 160 170 180
180 190 200 210 220 230
mFLJ00 CLAERWSGKKGDIASLGGKKSKKKRSGVKGSSSGSSKQRKELGGLGEDANAEEEEEGVQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
gi|263 CLAERWSGKKGDIASLGGKKSKKKRSGVKGSSSGSSKQRKELGGLGEDANAEEEE-GVQK
190 200 210 220 230
240
mFLJ00 ASPLPHSPPDEL
::::::::::::
gi|263 ASPLPHSPPDEL
240 250
>>gi|81906035|sp|Q9DAU1.1|CNPY3_MOUSE RecName: Full=Prot (276 aa)
initn: 1485 init1: 1485 opt: 1588 Z-score: 1893.1 bits: 357.9 E(): 9.6e-97
Smith-Waterman score: 1588; 99.588% identity (99.588% similar) in 243 aa overlap (1-243:35-276)
10 20 30
mFLJ00 AGAEETDWVRLPSKCEVCKYVAVELKSAFE
::::::::::::::::::::::::::::::
gi|819 SELAPRCLLFPLLLLLPLLLLPAPKLGPSPAGAEETDWVRLPSKCEVCKYVAVELKSAFE
10 20 30 40 50 60
40 50 60 70 80 90
mFLJ00 ETGKTKEVIDTGYGILDGKGSGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|819 ETGKTKEVIDTGYGILDGKGSGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
70 80 90 100 110 120
100 110 120 130 140 150
mFLJ00 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|819 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
130 140 150 160 170 180
160 170 180 190 200 210
mFLJ00 QEEDLTEFLCANHVLKGKDTSCLAERWSGKKGDIASLGGKKSKKKRSGVKGSSSGSSKQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|819 QEEDLTEFLCANHVLKGKDTSCLAERWSGKKGDIASLGGKKSKKKRSGVKGSSSGSSKQR
190 200 210 220 230 240
220 230 240
mFLJ00 KELGGLGEDANAEEEEEGVQKASPLPHSPPDEL
:::::::::::::::: ::::::::::::::::
gi|819 KELGGLGEDANAEEEE-GVQKASPLPHSPPDEL
250 260 270
>>gi|149069416|gb|EDM18857.1| rCG43420, isoform CRA_b [R (276 aa)
initn: 1434 init1: 1434 opt: 1493 Z-score: 1780.2 bits: 337.0 E(): 1.9e-90
Smith-Waterman score: 1493; 94.286% identity (96.735% similar) in 245 aa overlap (1-243:34-276)
10 20 30
mFLJ00 AGAEETDWVRLPSKCEVCKYVAVELKSAFE
::::::::::::::::::::::::::::::
gi|149 MSELAPRCLLLLLLLLPLLLLPAPKLGPSSAGAEETDWVRLPSKCEVCKYVAVELKSAFE
10 20 30 40 50 60
40 50 60 70 80 90
mFLJ00 ETGKTKEVIDTGYGILDGKGSGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
::::::::::::::::: :.::::::::::::::::::::::::::::::::::::::::
gi|149 ETGKTKEVIDTGYGILDRKASGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
70 80 90 100 110 120
100 110 120 130 140 150
mFLJ00 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
130 140 150 160 170 180
160 170 180 190 200
mFLJ00 QEEDLTEFLCANHVLKGKDTSCLAERWSGKKGDIASLGGKKSKKKRSGVKGSSSG--SSK
::::::.:::::::::::::::::::::::::::::::::::::::. :::::.: :::
gi|149 QEEDLTQFLCANHVLKGKDTSCLAERWSGKKGDIASLGGKKSKKKRGRVKGSSGGGGSSK
190 200 210 220 230 240
210 220 230 240
mFLJ00 QRKELGGLGEDANAEEEEEGVQKASPLPHSPPDEL
::::::.: :::: .:: ::::::::::::::::
gi|149 QRKELGSLEEDANPDEE--GVQKASPLPHSPPDEL
250 260 270
>>gi|187469175|gb|AAI66762.1| Cnpy3 protein [Rattus norv (276 aa)
initn: 1432 init1: 1432 opt: 1488 Z-score: 1774.2 bits: 335.9 E(): 4e-90
Smith-Waterman score: 1488; 93.878% identity (96.735% similar) in 245 aa overlap (1-243:34-276)
10 20 30
mFLJ00 AGAEETDWVRLPSKCEVCKYVAVELKSAFE
::::::::::::::::::::::::::::::
gi|187 MSELAPRCLLLLLLLLPLLLLPAPKLGPSSAGAEETDWVRLPSKCEVCKYVAVELKSAFE
10 20 30 40 50 60
40 50 60 70 80 90
mFLJ00 ETGKTKEVIDTGYGILDGKGSGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
::::::::::::::::: :.::::::::::::::::::::::::::::::::::::::::
gi|187 ETGKTKEVIDTGYGILDRKASGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
70 80 90 100 110 120
100 110 120 130 140 150
mFLJ00 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|187 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
130 140 150 160 170 180
160 170 180 190 200
mFLJ00 QEEDLTEFLCANHVLKGKDTSCLAERWSGKKGDIASLGGKKSKKKRSGVKGSSSGS--SK
::::::.:::::::::::::::::::::::::::::::::::::::. :::::.:. ::
gi|187 QEEDLTQFLCANHVLKGKDTSCLAERWSGKKGDIASLGGKKSKKKRGRVKGSSGGGGGSK
190 200 210 220 230 240
210 220 230 240
mFLJ00 QRKELGGLGEDANAEEEEEGVQKASPLPHSPPDEL
::::::.: :::: .:: ::::::::::::::::
gi|187 QRKELGSLEEDANPDEE--GVQKASPLPHSPPDEL
250 260 270
>>gi|73972976|ref|XP_851722.1| PREDICTED: similar to tri (279 aa)
initn: 1401 init1: 1266 opt: 1430 Z-score: 1705.2 bits: 323.2 E(): 2.8e-86
Smith-Waterman score: 1430; 90.947% identity (95.473% similar) in 243 aa overlap (1-243:39-279)
10 20 30
mFLJ00 AGAEETDWVRLPSKCEVCKYVAVELKSAFE
: ::::::::::::::::::::::::::::
gi|739 PRPGPRCLLLLSLLLLLLQLLPAPELGPSQAQAEETDWVRLPSKCEVCKYVAVELKSAFE
10 20 30 40 50 60
40 50 60 70 80 90
mFLJ00 ETGKTKEVIDTGYGILDGKGSGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
::.:::::::::::::: :.::::::::::::::::::::::::::::::::::::::::
gi|739 ETSKTKEVIDTGYGILDRKASGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
70 80 90 100 110 120
100 110 120 130 140 150
mFLJ00 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
130 140 150 160 170 180
160 170 180 190 200 210
mFLJ00 QEEDLTEFLCANHVLKGKDTSCLAERWSGKKGDIASLGGKKSKKKRSGVKGSSSGSSKQR
::::::.::::::::::::::::::.::::::: :.::::::::: : ::.:.: :::::
gi|739 QEEDLTQFLCANHVLKGKDTSCLAEQWSGKKGDTAALGGKKSKKKSSRVKASGS-SSKQR
190 200 210 220 230 240
220 230 240
mFLJ00 KELGGLGEDANAEEEEEGVQKASPLPHSPPDEL
:::::: :: . .:.: :.:::::: :::::::
gi|739 KELGGLEEDPSPDEDE-GIQKASPLTHSPPDEL
250 260 270
>>gi|74752319|sp|Q9BT09.1|CNPY3_HUMAN RecName: Full=Prot (278 aa)
initn: 1301 init1: 1270 opt: 1429 Z-score: 1704.1 bits: 322.9 E(): 3.3e-86
Smith-Waterman score: 1429; 90.204% identity (94.286% similar) in 245 aa overlap (1-243:35-278)
10 20 30
mFLJ00 AGAEETDWVRLPSKCEVCKYVAVELKSAFE
:::::.::::::::::::::::::::::::
gi|747 PEPASRCLLLLPLLLLLLLLLPAPELGPSQAGAEENDWVRLPSKCEVCKYVAVELKSAFE
10 20 30 40 50 60
40 50 60 70 80 90
mFLJ00 ETGKTKEVIDTGYGILDGKGSGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
::::::::: ::::::: :.::::::::::::::::::::::::::::::::::::::::
gi|747 ETGKTKEVIGTGYGILDQKASGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
70 80 90 100 110 120
100 110 120 130 140 150
mFLJ00 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
130 140 150 160 170 180
160 170 180 190 200
mFLJ00 QEEDLTEFLCANHVLKGKDTSCLAERWSGKKGDIASLGGKKSKKKRSGVK--GSSSGSSK
:::::::::::::::::::::::::.::::::: :.::::::::: : .: :. :.:::
gi|747 QEEDLTEFLCANHVLKGKDTSCLAEQWSGKKGDTAALGGKKSKKKSSRAKAAGGRSSSSK
190 200 210 220 230 240
210 220 230 240
mFLJ00 QRKELGGLGEDANAEEEEEGVQKASPLPHSPPDEL
:::::::: : . ::.::.:::::: :::::::
gi|747 QRKELGGL-EGDPSPEEDEGIQKASPLTHSPPDEL
250 260 270
>>gi|114607481|ref|XP_518480.2| PREDICTED: trinucleotide (278 aa)
initn: 1301 init1: 1270 opt: 1429 Z-score: 1704.1 bits: 322.9 E(): 3.3e-86
Smith-Waterman score: 1429; 90.204% identity (94.286% similar) in 245 aa overlap (1-243:35-278)
10 20 30
mFLJ00 AGAEETDWVRLPSKCEVCKYVAVELKSAFE
:::::.::::::::::::::::::::::::
gi|114 PEPASRCLLLLPLLLLLLLLLPAPELGPSQAGAEENDWVRLPSKCEVCKYVAVELKSAFE
10 20 30 40 50 60
40 50 60 70 80 90
mFLJ00 ETGKTKEVIDTGYGILDGKGSGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
::::::::: ::::::: :.::::::::::::::::::::::::::::::::::::::::
gi|114 ETGKTKEVIGTGYGILDQKASGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
70 80 90 100 110 120
100 110 120 130 140 150
mFLJ00 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
130 140 150 160 170 180
160 170 180 190 200
mFLJ00 QEEDLTEFLCANHVLKGKDTSCLAERWSGKKGDIASLGGKKSKKKRSGVK--GSSSGSSK
:::::::::::::::::::::::::.::::::: :.::::::::: : .: :. :.:::
gi|114 QEEDLTEFLCANHVLKGKDTSCLAEQWSGKKGDTAALGGKKSKKKSSRAKAAGGRSSSSK
190 200 210 220 230 240
210 220 230 240
mFLJ00 QRKELGGLGEDANAEEEEEGVQKASPLPHSPPDEL
:::::::: : . ::.::.:::::: :::::::
gi|114 QRKELGGL-EGDPSPEEDEGIQKASPLTHSPPDEL
250 260 270
>>gi|119624518|gb|EAX04113.1| trinucleotide repeat conta (278 aa)
initn: 1296 init1: 1262 opt: 1427 Z-score: 1701.7 bits: 322.5 E(): 4.5e-86
Smith-Waterman score: 1427; 89.796% identity (94.286% similar) in 245 aa overlap (1-243:35-278)
10 20 30
mFLJ00 AGAEETDWVRLPSKCEVCKYVAVELKSAFE
:::::.::::::::::::::::::::::::
gi|119 PEPASRCLLLLPLLLLLLLLLPAPELGPSQAGAEENDWVRLPSKCEVCKYVAVELKSAFE
10 20 30 40 50 60
40 50 60 70 80 90
mFLJ00 ETGKTKEVIDTGYGILDGKGSGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
::::::::: ::::::: :.::::::::::::::::::::::::::::::::::::::::
gi|119 ETGKTKEVIGTGYGILDQKASGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
70 80 90 100 110 120
100 110 120 130 140 150
mFLJ00 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
130 140 150 160 170 180
160 170 180 190 200
mFLJ00 QEEDLTEFLCANHVLKGKDTSCLAERWSGKKGDIASLGGKKSKKK--RSGVKGSSSGSSK
:::::::::::::::::::::::::.::::::: :.::::::::: :. . :. :.:::
gi|119 QEEDLTEFLCANHVLKGKDTSCLAEQWSGKKGDTAALGGKKSKKKSIRAKAAGGRSSSSK
190 200 210 220 230 240
210 220 230 240
mFLJ00 QRKELGGLGEDANAEEEEEGVQKASPLPHSPPDEL
:::::::: : . ::.::.:::::: :::::::
gi|119 QRKELGGL-EGDPSPEEDEGIQKASPLTHSPPDEL
250 260 270
>>gi|166216082|sp|A5GFQ5.1|CNPY3_PIG RecName: Full=Prote (283 aa)
initn: 1405 init1: 1272 opt: 1423 Z-score: 1696.8 bits: 321.6 E(): 8.3e-86
Smith-Waterman score: 1423; 90.123% identity (95.062% similar) in 243 aa overlap (1-243:43-283)
10 20 30
mFLJ00 AGAEETDWVRLPSKCEVCKYVAVELKSAFE
: ::::::::::::::::::::::::::::
gi|166 LRPRPRCLLLLPLLLLLLLLLPAPELGPREARAEETDWVRLPSKCEVCKYVAVELKSAFE
20 30 40 50 60 70
40 50 60 70 80 90
mFLJ00 ETGKTKEVIDTGYGILDGKGSGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
::::::::::::::::: :.::::::::::::::::::::::::::::::::::::::::
gi|166 ETGKTKEVIDTGYGILDRKASGVKYTKSDLRLIEVTETICKRLLDYSLHKERTGSNRFAK
80 90 100 110 120 130
100 110 120 130 140 150
mFLJ00 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|166 GMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNH
140 150 160 170 180 190
160 170 180 190 200 210
mFLJ00 QEEDLTEFLCANHVLKGKDTSCLAERWSGKKGDIASLGGKKSKKKRSGVKGSSSGSSKQR
::::::.::::::::::::::::::.::::::: :.::::::::: : .: .:.:.::::
gi|166 QEEDLTQFLCANHVLKGKDTSCLAEQWSGKKGDTAALGGKKSKKKSSRAK-ASGGGSKQR
200 210 220 230 240 250
220 230 240
mFLJ00 KELGGLGEDANAEEEEEGVQKASPLPHSPPDEL
:::::. : . ::.::.:::::: :::::::
gi|166 KELGGI-EGDPSPEEDEGIQKASPLTHSPPDEL
260 270 280
243 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Mar 13 06:36:42 2009 done: Fri Mar 13 06:41:49 2009
Total Scan time: 722.870 Total Display time: 0.040
Function used was FASTA [version 34.26.5 April 26, 2007]