Comparison of KIAA cDNA sequences between mouse and human (FLJ00338)
<< Original sequence data >>
mouse mFLJ00338 (msk03217) length: 1655 bp
human (sj06258) length: 4469 bp
<< Aligned sequence information (excl. stop, if exists.) >>
----------------------------------------------------------
length #match #mismatch %diff
----------------------------------------------------------
DNA
CDS1 : 338 292 46 13.61
Total: 338 292 46 13.61
3'UTR: 476 264 212 44.54
amino acid
CDS1 : 114 94 20 17.54
Total: 114 94 20 17.54
----------------------------------------------------------
<< Alignment region (incl. stop, if exists.) >>
----------------------------------------------------------
cDNA cDNA original amino acid
----------------------------------------------------------
CDS1 : mouse 391 - 732 1 - 732 131 - 244
human 3654 - 3998 3654 - 3998 1 - 115
3'UTR: mouse 733 - 1655
human 3999 - 4469
----------------------------------------------------------
<< Alignment >>
*--[ CDS1 ]--*
1 ----+----*----+----*----+----*----+----*----+----* 50
131 Q C D V L V E E F E E V I E D W Y 147
msk03217 391 CAGTGTGACGTGCTGGTGGAAGAGTTTGAAGAGGTGATTGAGGACTGGTA 440
|||||||| |||||||||||||||||||| |||||||| |||||||||||
sj06258 3654 CAGTGTGATGTGCTGGTGGAAGAGTTTGAGGAGGTGATCGAGGACTGGTA 3703
1 Q C D V L V E E F E E V I E D W Y 17
51 ----+----*----+----*----+----*----+----*----+----* 100
148 R N H Q E E D L T E F L C A N H V 164
msk03217 441 CAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGTGCCAACCACG 490
||||||||||||||||||||||||||||||||||||||| ||||||||||
sj06258 3704 CAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGCGCCAACCACG 3753
18 R N H Q E E D L T E F L C A N H V 34
101 ----+----*----+----*----+----*----+----*----+----* 150
165 L K G K D T S C L A E R W S G K 180
msk03217 491 TGCTGAAGGGAAAGGACACGAGTTGCCTAGCAGAGCGGTGGTCTGGCAAG 540
||||||||||||| ||||| |||||||| ||||||| |||||| ||||||
sj06258 3754 TGCTGAAGGGAAAAGACACCAGTTGCCTGGCAGAGCAGTGGTCCGGCAAG 3803
35 L K G K D T S C L A E Q W S G K 50
151 ----+----*----+----*----+----*----+----*----+----* 200
181 K G D I A S L G G K K S K K K R S 197
msk03217 541 AAGGGGGACATAGCCTCCCTGGGAGGGAAGAAATCCAAGAAGAAGCGCAG 590
||||| |||| ||| |||||||||||||||| |||||||||||| ||||
sj06258 3804 AAGGGAGACACAGCTGCCCTGGGAGGGAAGAAGTCCAAGAAGAAGAGCAG 3853
51 K G D T A A L G G K K S K K K S S 67
201 ----+----*----+----*----+----*----+----*----+----* 250
198 G V K . . G S S S G S S K Q R K E 212
msk03217 591 CGGGGTCAAG......GGCTCCTCCAGTGGCAGCAGCAAGCAGAGGAAGG 634
| ||| |||| ||| | ||| |||||||||| || |||||||
sj06258 3854 CAGGGCCAAGGCAGCAGGCGGCAGGAGTAGCAGCAGCAAACAAAGGAAGG 3903
68 R A K A A G G R S S S S K Q R K E 84
251 ----+----*----+----*----+----*----+----*----+----* 300
213 L G G L G E D A N A E E E E E G 228
msk03217 635 AACTGGGGGGCCTGGGGGAGGATGCCAACGCCGAGGAGGAGGAGGAGGGT 684
| ||||| ||||| | || || ||| | |||||||||| ||| ||
sj06258 3904 AGCTGGGTGGCCTTGAGGGAGACCCCAGCCCCGAGGAGGATGAG...GGC 3950
85 L G G L E G D P S P E E D E . G 99
301 ----+----*----+----*----+----*----+----*----+--- 348
229 V Q K A S P L P H S P P D E L * 244
msk03217 685 GTGCAGAAGGCATCGCCCCTCCCACACAGCCCCCCTGATGAGCTGTGA 732
| ||||||||||| || ||| ||| |||||||||||||||||| |||
sj06258 3951 ATCCAGAAGGCATCCCCTCTCACACCCAGCCCCCCTGATGAGCTCTGA 3998
100 I Q K A S P L T P S P P D E L * 115
*--[ 3'UTR ]--*
1 ----+----*----+----*----+----*----+----*----+----* 50
msk03217 733 GCCCAGCTTAGTGTCCTTGAATCAAGACCCCTGACTTCAGAGCTTGGGAC 782
||||| | | || |||||||||| || |||| |||
sj06258 3999 GCCCACCCAGCATCCTCTGTCCTGAGACCCCTGATTTTGAAGCTGAGGAG 4048
51 ----+----*----+----*----+----*----+----*----+----* 100
msk03217 783 ACGCACAGCACAGCGCAGCTCCAGCAAGGACAGCTGCTGTACAGCGTCAG 832
|
sj06258 4049 TC................................................ 4050
101 ----+----*----+----*----+----*----+----*----+----* 150
msk03217 833 GTCTCCTCCCTTGGCTGTGCCCCTTTCCTTCCCTTCAACAACAGCAAGAG 882
||
sj06258 4051 ................................................AG 4052
151 ----+----*----+----*----+----*----+----*----+----* 200
msk03217 883 GTGGAAGGATCTGGGGTGCTGGGAGACGGCACCCCAAAGGGAAGAGGAGG 932
| | | || ||||| || |||| ||
sj06258 4053 GGGCATGGCTCTGGCAGGCCGGGA....................TGGCCC 4082
201 ----+----*----+----*----+----*----+----*----+----* 250
msk03217 933 AGGAGCAGAAGGCAGCTCCCTTTCTACACAGTCCCCCTCACGAGCTCCGG 982
| ||| || |||| | || | || |||
sj06258 4083 CGCAGCCTTCAGCCCCTCCTTGCCTTGGCTGTGCCC.............. 4118
251 ----+----*----+----*----+----*----+----*----+----* 300
msk03217 983 GGTCCACCCAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCT 1032
|| ||| || ||||
sj06258 4119 ................................TCTTCTGCCAAGGAAAGA 4136
301 ----+----*----+----*----+----*----+----*----+----* 350
msk03217 1033 GAAGAGCATGAGGCACATAAGATGCTCACCAGCGCCCCCTTCAGCCAGGA 1082
| ||| ||||||
sj06258 4137 CACAAGC....................................CCCAGGA 4150
351 ----+----*----+----*----+----*----+----*----+----* 400
msk03217 1083 AGGACTCCGTGCAGCCTCAG..CAGCCAGGCCTGCCTCTTCCTTCCACCA 1130
|| |||| | || | | | ||| ||| ||| | || ||| | |
sj06258 4151 AGAACTCAGAGCCGTCATGGGTAGCCCACGCCGTCCTTTCCCCTCCCCAA 4200
401 ----+----*----+----*----+----*----+----*----+----* 450
msk03217 1131 AGCATTCTCTTCTG....CTGGTCCTTGTCGGATGGTAAATTCGAGAACT 1176
|||||| ||| ||| | | || || || |||
sj06258 4201 GTGTTTCTCTCCTGACCCAGGGTTCAGGCAGGCCTTGTGGTTTCAGGACT 4250
451 ----+----*----+----*----+----*----+----*----+----* 500
msk03217 1177 TCCAGGACAAACTCGGGTGTG.GCACAAAGGGGCTGGACGCCAGAGCCAG 1225
| ||| |||| ||||| | || ||| | | ||||
sj06258 4251 GCAAGG....ACTCCAGTGTGAACTCAGGAGGGGCAGGTGTCAGA..... 4291
501 ----+----*----+----*----+----*----+----*----+----* 550
msk03217 1226 AGCCACGCCAGAGACTGCAGAGAGGGCACCTGACCT..AACCCCCCTGGG 1273
| ||||||| | || | ||||| ||
sj06258 4292 ....................ACTGGGCACCAGGACTGGAGCCCCCTCCGG 4321
551 ----+----*----+----*----+----*----+----*----+----* 600
msk03217 1274 AAGCCAATCTGCTGTTCCCGTGTCCTCCCACTCCTCCTGAGGACGCCTCA 1323
| |||| || ||| | || |||||| | | | |
sj06258 4322 AGACCAAACTCACCATCC........CTCAGTCCTCCCCAACAGGGTACT 4363
601 ----+----*----+----*----+----*----+----*----+----* 650
msk03217 1324 TGCTCTGCCCAGCCCTTCTCCCAGGGCTACCAGAGTAAACACCTTTTGGC 1373
| |||| ||||
sj06258 4364 AGGACTGCAGCCCCCT.................................. 4379
651 ----+----*----+----*----+----*----+----*----+----* 700
msk03217 1374 CTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTGTCCCCTTAT 1423
sj06258 4380 .................................................. 4380
701 ----+----*----+----*----+----*----+----*----+----* 750
msk03217 1424 CGATCTTTTTTGCCTTTGTCCCCCAATCCCAGGGGCTGGAAGGCCATCAC 1473
sj06258 4380 .................................................. 4380
751 ----+----*----+----*----+----*----+----*----+----* 800
msk03217 1474 CATCATTGGAGGCTTAACCTGTCAGTTACTAGGAGGTGCTGGGAGCGCCC 1523
sj06258 4380 .................................................. 4380
801 ----+----*----+----*----+----*----+----*----+----* 850
msk03217 1524 GGGGTTGGTTTGGGGTAATCACTCACTGGTTTCTAACACTGCAGCCCCTT 1573
||| ||| ||| || | ||| | | | |
sj06258 4380 ..............GTAGCTCCTCTCTGCTTACCCCTCCTGTGGACACCT 4415
851 ----+----*----+----*----+----*----+----*----+----* 900
msk03217 1574 AATACAGTTCCTTCTGTTGTGGTGACTCCCCCACGCCCCCACCCACACAC 1623
|| | ||| | ||| |||| | |
sj06258 4416 TGCACTCTGCCT......................GGCCCTTCCCAGAGCC 4443
901 ----+----*----+----*----+----*-- 932
msk03217 1624 ACACCATAAAATTATTTTCGTTGCTGTTTCAT 1655
| | ||| || | | |||
sj06258 4444 CAAAGAGTAAAAATGTTCTGGTTCTG...... 4469