Comparison of KIAA cDNA sequences between mouse and human (FLJ00338)

<< Original sequence data >>

mouse  mFLJ00338 (msk03217)     length:   1655 bp
human     (sj06258)     length:   4469 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      338       292       46      13.61
  Total:      338       292       46      13.61

  3'UTR:      476       264      212      44.54

amino acid

  CDS1 :      114        94       20      17.54
  Total:      114        94       20      17.54
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse   391 -   732      1 -   732    131 -   244
         human  3654 -  3998   3654 -  3998      1 -   115
  3'UTR: mouse   733 -  1655
         human  3999 -  4469
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
           131 Q  C  D  V  L  V  E  E  F  E  E  V  I  E  D  W  Y  147
msk03217   391 CAGTGTGACGTGCTGGTGGAAGAGTTTGAAGAGGTGATTGAGGACTGGTA 440
               |||||||| |||||||||||||||||||| |||||||| |||||||||||
sj06258   3654 CAGTGTGATGTGCTGGTGGAAGAGTTTGAGGAGGTGATCGAGGACTGGTA 3703
             1 Q  C  D  V  L  V  E  E  F  E  E  V  I  E  D  W  Y  17

            51 ----+----*----+----*----+----*----+----*----+----* 100
           148  R  N  H  Q  E  E  D  L  T  E  F  L  C  A  N  H  V 164
msk03217   441 CAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGTGCCAACCACG 490
               ||||||||||||||||||||||||||||||||||||||| ||||||||||
sj06258   3704 CAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGCGCCAACCACG 3753
            18  R  N  H  Q  E  E  D  L  T  E  F  L  C  A  N  H  V 34

           101 ----+----*----+----*----+----*----+----*----+----* 150
           165   L  K  G  K  D  T  S  C  L  A  E  R  W  S  G  K   180
msk03217   491 TGCTGAAGGGAAAGGACACGAGTTGCCTAGCAGAGCGGTGGTCTGGCAAG 540
               ||||||||||||| ||||| |||||||| ||||||| |||||| ||||||
sj06258   3754 TGCTGAAGGGAAAAGACACCAGTTGCCTGGCAGAGCAGTGGTCCGGCAAG 3803
            35   L  K  G  K  D  T  S  C  L  A  E  Q  W  S  G  K   50

           151 ----+----*----+----*----+----*----+----*----+----* 200
           181 K  G  D  I  A  S  L  G  G  K  K  S  K  K  K  R  S  197
msk03217   541 AAGGGGGACATAGCCTCCCTGGGAGGGAAGAAATCCAAGAAGAAGCGCAG 590
               ||||| |||| |||  |||||||||||||||| |||||||||||| ||||
sj06258   3804 AAGGGAGACACAGCTGCCCTGGGAGGGAAGAAGTCCAAGAAGAAGAGCAG 3853
            51 K  G  D  T  A  A  L  G  G  K  K  S  K  K  K  S  S  67

           201 ----+----*----+----*----+----*----+----*----+----* 250
           198  G  V  K  .  .  G  S  S  S  G  S  S  K  Q  R  K  E 212
msk03217   591 CGGGGTCAAG......GGCTCCTCCAGTGGCAGCAGCAAGCAGAGGAAGG 634
               | ||| ||||      |||  |   ||| |||||||||| || |||||||
sj06258   3854 CAGGGCCAAGGCAGCAGGCGGCAGGAGTAGCAGCAGCAAACAAAGGAAGG 3903
            68  R  A  K  A  A  G  G  R  S  S  S  S  K  Q  R  K  E 84

           251 ----+----*----+----*----+----*----+----*----+----* 300
           213   L  G  G  L  G  E  D  A  N  A  E  E  E  E  E  G   228
msk03217   635 AACTGGGGGGCCTGGGGGAGGATGCCAACGCCGAGGAGGAGGAGGAGGGT 684
               | ||||| ||||| | ||  ||  ||| | |||||||||| |||   || 
sj06258   3904 AGCTGGGTGGCCTTGAGGGAGACCCCAGCCCCGAGGAGGATGAG...GGC 3950
            85   L  G  G  L  E  G  D  P  S  P  E  E  D  E  .  G   99

           301 ----+----*----+----*----+----*----+----*----+--- 348
           229 V  Q  K  A  S  P  L  P  H  S  P  P  D  E  L  *   244
msk03217   685 GTGCAGAAGGCATCGCCCCTCCCACACAGCCCCCCTGATGAGCTGTGA 732
                | ||||||||||| || ||| ||| |||||||||||||||||| |||
sj06258   3951 ATCCAGAAGGCATCCCCTCTCACACCCAGCCCCCCTGATGAGCTCTGA 3998
           100 I  Q  K  A  S  P  L  T  P  S  P  P  D  E  L  *   115


*--[ 3'UTR ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
msk03217   733 GCCCAGCTTAGTGTCCTTGAATCAAGACCCCTGACTTCAGAGCTTGGGAC 782
               ||||| |       |  ||     |||||||||| ||   ||||  ||| 
sj06258   3999 GCCCACCCAGCATCCTCTGTCCTGAGACCCCTGATTTTGAAGCTGAGGAG 4048

            51 ----+----*----+----*----+----*----+----*----+----* 100
msk03217   783 ACGCACAGCACAGCGCAGCTCCAGCAAGGACAGCTGCTGTACAGCGTCAG 832
                |                                                
sj06258   4049 TC................................................ 4050

           101 ----+----*----+----*----+----*----+----*----+----* 150
msk03217   833 GTCTCCTCCCTTGGCTGTGCCCCTTTCCTTCCCTTCAACAACAGCAAGAG 882
                                                               ||
sj06258   4051 ................................................AG 4052

           151 ----+----*----+----*----+----*----+----*----+----* 200
msk03217   883 GTGGAAGGATCTGGGGTGCTGGGAGACGGCACCCCAAAGGGAAGAGGAGG 932
               | | | || |||||   || ||||                     ||   
sj06258   4053 GGGCATGGCTCTGGCAGGCCGGGA....................TGGCCC 4082

           201 ----+----*----+----*----+----*----+----*----+----* 250
msk03217   933 AGGAGCAGAAGGCAGCTCCCTTTCTACACAGTCCCCCTCACGAGCTCCGG 982
                | |||     ||  |||| |  ||   | || |||              
sj06258   4083 CGCAGCCTTCAGCCCCTCCTTGCCTTGGCTGTGCCC.............. 4118

           251 ----+----*----+----*----+----*----+----*----+----* 300
msk03217   983 GGTCCACCCAGCATCCCCAGGCTGAGATCCAGGCTCCTGACATGGAAGCT 1032
                                                || ||| || ||||   
sj06258   4119 ................................TCTTCTGCCAAGGAAAGA 4136

           301 ----+----*----+----*----+----*----+----*----+----* 350
msk03217  1033 GAAGAGCATGAGGCACATAAGATGCTCACCAGCGCCCCCTTCAGCCAGGA 1082
                |  |||                                     ||||||
sj06258   4137 CACAAGC....................................CCCAGGA 4150

           351 ----+----*----+----*----+----*----+----*----+----* 400
msk03217  1083 AGGACTCCGTGCAGCCTCAG..CAGCCAGGCCTGCCTCTTCCTTCCACCA 1130
               || |||| | || | |   |     ||| |||  ||| | || ||| | |
sj06258   4151 AGAACTCAGAGCCGTCATGGGTAGCCCACGCCGTCCTTTCCCCTCCCCAA 4200

           401 ----+----*----+----*----+----*----+----*----+----* 450
msk03217  1131 AGCATTCTCTTCTG....CTGGTCCTTGTCGGATGGTAAATTCGAGAACT 1176
                   |||||| |||      ||| |  |  ||        ||  || |||
sj06258   4201 GTGTTTCTCTCCTGACCCAGGGTTCAGGCAGGCCTTGTGGTTTCAGGACT 4250

           451 ----+----*----+----*----+----*----+----*----+----* 500
msk03217  1177 TCCAGGACAAACTCGGGTGTG.GCACAAAGGGGCTGGACGCCAGAGCCAG 1225
                | |||    ||||  |||||  | ||   |||   |  | ||||     
sj06258   4251 GCAAGG....ACTCCAGTGTGAACTCAGGAGGGGCAGGTGTCAGA..... 4291

           501 ----+----*----+----*----+----*----+----*----+----* 550
msk03217  1226 AGCCACGCCAGAGACTGCAGAGAGGGCACCTGACCT..AACCCCCCTGGG 1273
                                   |  ||||||| |  ||  | |||||   ||
sj06258   4292 ....................ACTGGGCACCAGGACTGGAGCCCCCTCCGG 4321

           551 ----+----*----+----*----+----*----+----*----+----* 600
msk03217  1274 AAGCCAATCTGCTGTTCCCGTGTCCTCCCACTCCTCCTGAGGACGCCTCA 1323
               |  |||| ||     |||        | || ||||||  |  | |   | 
sj06258   4322 AGACCAAACTCACCATCC........CTCAGTCCTCCCCAACAGGGTACT 4363

           601 ----+----*----+----*----+----*----+----*----+----* 650
msk03217  1324 TGCTCTGCCCAGCCCTTCTCCCAGGGCTACCAGAGTAAACACCTTTTGGC 1373
                |  ||||    ||||                                  
sj06258   4364 AGGACTGCAGCCCCCT.................................. 4379

           651 ----+----*----+----*----+----*----+----*----+----* 700
msk03217  1374 CTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTGTCCCCTTAT 1423
                                                                 
sj06258   4380 .................................................. 4380

           701 ----+----*----+----*----+----*----+----*----+----* 750
msk03217  1424 CGATCTTTTTTGCCTTTGTCCCCCAATCCCAGGGGCTGGAAGGCCATCAC 1473
                                                                 
sj06258   4380 .................................................. 4380

           751 ----+----*----+----*----+----*----+----*----+----* 800
msk03217  1474 CATCATTGGAGGCTTAACCTGTCAGTTACTAGGAGGTGCTGGGAGCGCCC 1523
                                                                 
sj06258   4380 .................................................. 4380

           801 ----+----*----+----*----+----*----+----*----+----* 850
msk03217  1524 GGGGTTGGTTTGGGGTAATCACTCACTGGTTTCTAACACTGCAGCCCCTT 1573
                             |||    ||| ||| || |     |||  | | | |
sj06258   4380 ..............GTAGCTCCTCTCTGCTTACCCCTCCTGTGGACACCT 4415

           851 ----+----*----+----*----+----*----+----*----+----* 900
msk03217  1574 AATACAGTTCCTTCTGTTGTGGTGACTCCCCCACGCCCCCACCCACACAC 1623
                  ||  | |||                      | |||  |||| |  |
sj06258   4416 TGCACTCTGCCT......................GGCCCTTCCCAGAGCC 4443

           901 ----+----*----+----*----+----*-- 932
msk03217  1624 ACACCATAAAATTATTTTCGTTGCTGTTTCAT 1655
                 |  |  |||    ||  | | |||      
sj06258   4444 CAAAGAGTAAAAATGTTCTGGTTCTG...... 4469