Comparison of KIAA cDNA sequences between mouse and human (FLJ00338)
<<Original sequence data>>
mouse mFLJ00338 (msk03217) length: 1655 bp, CDS: 1 - 732
human (sj06258) length: 4469 bp, CDS: 3654 - 3998
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 8 - 3661 327 59 15.3
CDS: 3662 - 4009 295 46 13.5
3'UTR: 4010 - 4935 264 211 44.4
amino acid
CDS: 3662 - 4009 95 20 17.4
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msk03217 1 GCCGGGGCTGAGGAGACCGACTGGGTGCGATTGCCCAGCAAATGCGAAGT 50
|| | | | | | | | || | | | | |||
sj06258 1 .......CTCATGTG.CACTCAGTGGGCTGTGCTACCTCCCTCCCCCAGT 42
51 ----+----*----+----*----+----*----+----*----+----* 100
msk03217 51 GTGCAAGTATGTTGCTGTGGAGCTGAAGTCGGCTTTTGAGGAAACAGGAA 100
||| || ||||||||||||||||||||||| || ||||||||||| || |
sj06258 43 GTGTAAATATGTTGCTGTGGAGCTGAAGTCAGCCTTTGAGGAAACCGGCA 92
101 ----+----*----+----*----+----*----+----*----+----* 150
msk03217 101 AGACCAAGGAAGTGATTGACACCGGCTATGGCATCCTGGACGGGAAGGGC 150
|||||||||| ||||||| ||| |||||||||||||||||| ||||| |
sj06258 93 AGACCAAGGAGGTGATTGGCACGGGCTATGGCATCCTGGACCAGAAGGCC 142
151 ----+----*----+----*----+----*----+----*----+----* 200
msk03217 151 TCTGGAGTCAAGTACACCAAGTC........................... 173
||||||||||| |||||||||||
sj06258 143 TCTGGAGTCAAATACACCAAGTCGTAAGTGAATGGGGACTCACTGGCCTG 192
201 ----+----*----+----*----+----*----+----*----+----* 250
msk03217 174 .................................................. 174
sj06258 193 GCCTGCGTTGCTGCTGGAGGCTTCAGGGGTTTGGAGTTCCCTTCTCCTAG 242
251 ----+----*----+----*----+----*----+----*----+----* 300
msk03217 174 .................................................. 174
sj06258 243 CTAGGCAAACCCCCTACAAGGGCATCATTTGTAACCAAGACCTGAGTTTG 292
301 ----+----*----+----*----+----*----+----*----+----* 350
msk03217 174 .................................................. 174
sj06258 293 CCCACTGATTCTGTCCCCAGCTAATTGGGTGACGTGCATAAATCCCTTAA 342
351 ----+----*----+----*----+----*----+----*----+----* 400
msk03217 174 .................................................. 174
sj06258 343 CTTCTTTATGCTTCAGCAGATTTCTCATCTCTAAAAGCAAGACTGTTGGA 392
401 ----+----*----+----*----+----*----+----*----+----* 450
msk03217 174 .................................................. 174
sj06258 393 CTATATCATTGATTCTCAGACGCTTGGATTTCACAGAGCAATGCAAGTTT 442
451 ----+----*----+----*----+----*----+----*----+----* 500
msk03217 174 .................................................. 174
sj06258 443 TTTTTTGCGACGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGC 492
501 ----+----*----+----*----+----*----+----*----+----* 550
msk03217 174 .................................................. 174
sj06258 493 ATGATCTTTGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGAGATTTTCC 542
551 ----+----*----+----*----+----*----+----*----+----* 600
msk03217 174 .................................................. 174
sj06258 543 TGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCATCACGCCC 592
601 ----+----*----+----*----+----*----+----*----+----* 650
msk03217 174 .................................................. 174
sj06258 593 AGCTAATTTTCTGTATTTTTTTAGTAGAGATGGAGTTTCACCATGTTGGT 642
651 ----+----*----+----*----+----*----+----*----+----* 700
msk03217 174 .................................................. 174
sj06258 643 TAGGCTGGTCTCGAACTCCTGACCTGAGATGATCCGCCTGCCTCGGCCTC 692
701 ----+----*----+----*----+----*----+----*----+----* 750
msk03217 174 .................................................. 174
sj06258 693 CCAAAGTGCTGGGATTACAGGTGTGAGCCACCACACCCGGCCACAGTGCA 742
751 ----+----*----+----*----+----*----+----*----+----* 800
msk03217 174 .................................................. 174
sj06258 743 ATTTTTTAAAACATTAGTAACAGGATTACCAGCTTTTTATTTTGCTAGGT 792
801 ----+----*----+----*----+----*----+----*----+----* 850
msk03217 174 .................................................. 174
sj06258 793 ACAAATATAGTTTTTAAAAACCCAATTCTGTCAGCTGTGATCATCCTTTC 842
851 ----+----*----+----*----+----*----+----*----+----* 900
msk03217 174 .................................................. 174
sj06258 843 AAAGAGAATGATATTTTACTATCAAAATTTAATAATTTTGCTTTATCAAA 892
901 ----+----*----+----*----+----*----+----*----+----* 950
msk03217 174 .................................................. 174
sj06258 893 AAATCTAAATACTGAATCATTTAGCTTTATAAAAAATTCCTTCCCTTAGA 942
951 ----+----*----+----*----+----*----+----*----+----* 1000
msk03217 174 .................................................. 174
sj06258 943 GCTGTTAAAATTTTGTCTCTCTGGTCTGTGTTCCAGCATTTCAGATCCCC 992
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msk03217 174 .................................................. 174
sj06258 993 CAGACCAGATGACCTATCTTCCTTCCAGCTCTGAGTCACTTCCCATTGGT 1042
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msk03217 174 .................................................. 174
sj06258 1043 GAGATGTGCAGGTGTTGGGGCACAGGGCTGGAGGGACAGACCACTAACCC 1092
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msk03217 174 ................................................GG 175
||
sj06258 1093 ACTGCGGCTAGGAGGGGAACTCAGTTCCTCATCCTCCTGTCTTGGCAGGG 1142
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msk03217 176 ACTTACGGTTAATTGAAGTCACTGAGACCATTTGCAAGAGGCTTCTGGAC 225
|||| |||||||| ||||||||||||||||||||||||||||| |||||
sj06258 1143 ACTTGCGGTTAATCGAAGTCACTGAGACCATTTGCAAGAGGCTCCTGGAT 1192
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msk03217 226 TACAGCCTGCACAAGGAGAGGACTGGCAGCAACCGGTTTGCCA....... 268
|| |||||||||||||||||||| |||||||| || |||||||
sj06258 1193 TATAGCCTGCACAAGGAGAGGACCGGCAGCAATCGATTTGCCAAGGTTGG 1242
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msk03217 269 .................................................. 269
sj06258 1243 ATTCGGGATTGTCCTTCATCCGCTCTGGGGTCAGGCCTGCATGTATCTTA 1292
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msk03217 269 .................................................. 269
sj06258 1293 GTGTGTCTGCTGGTGTGAGTGTGATTTGAAGATGACCACCTGGGATCTTC 1342
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msk03217 269 .................................................. 269
sj06258 1343 CTTCATTGCCTCTTCCCATTCTTTGATTGCCGTTTGTGCTCCTCCCCTCT 1392
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msk03217 269 .................................................. 269
sj06258 1393 TGAGTGGCCTCATTTTTCAGGCACATGCATGAGGGTCTGGGCCTGTTCAT 1442
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msk03217 269 .................................................. 269
sj06258 1443 GAGGGTCCTGCTTCAATCTCAGACACAGGCAGAAATGCTCCACAGTTGCT 1492
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msk03217 269 .................................................. 269
sj06258 1493 GCCCCCGTGGGAACCTAAAGACACTAGAACGGGGAGAACTCAGCAAGATC 1542
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msk03217 269 .................................................. 269
sj06258 1543 CACGATGTGCAGAAAGGTGGGGGTTTAGGCGAGGTGTCAGAGGACACCTG 1592
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msk03217 269 .................................................. 269
sj06258 1593 GGGGGGAGTGACTGCCCAGTCCCATCTCTGGGTCCACACAGCACCTCCCA 1642
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msk03217 269 .................................................. 269
sj06258 1643 CAACCCCGCTGGGATGCCCTTGTGATGGCCCATGTACTCAGTATGTGTAC 1692
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msk03217 269 .................................................. 269
sj06258 1693 GAGTGCTTTTCTCTCTGGAGAATGAGCTGCTTACAACAAGGCCCATAGTT 1742
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msk03217 269 .................................................. 269
sj06258 1743 CTTACTCTCTACATCTTCAGTGCCTGGCACAGGGTAAGATAGTTGCCACC 1792
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msk03217 269 .................................................. 269
sj06258 1793 CACATTTTTCTACCTAAGTTTCCTTCTAGCAAAGGATACCATTCATAAAC 1842
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msk03217 269 .................................................. 269
sj06258 1843 TCCTGGGATACCTAAGGGAATAGTCTCAAGCAGCAGAAATTTGTATGAAT 1892
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msk03217 269 .................................................. 269
sj06258 1893 TTTGCACTCAGTAATAAATCTGTGTTTGCTTTAATAAAAAGTGTTTAAGA 1942
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msk03217 269 .................................................. 269
sj06258 1943 ATTATTTTTCATAGCAGGAAAAAAATGAGAAACAATCTAACTCTACCAAT 1992
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msk03217 269 .................................................. 269
sj06258 1993 AGGGGATTAAATACGTTGATCCAGCCGTTTGGTGGACTAGTATGCGGCTG 2042
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msk03217 269 .................................................. 269
sj06258 2043 GAAACGAAGCATGGGGAGGCTCTTTAGGAACTGAATTCAATTGATTTTCA 2092
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msk03217 269 .................................................. 269
sj06258 2093 AGGTTTTTGTTTGTTTGTTTGTTTTGGAGACGGAGTCTCACACTCTGTTG 2142
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msk03217 269 .................................................. 269
sj06258 2143 CCCAAGCTGGAGCGCAGTGGTGCGATCTCAGTTCATTGCAACCTCCACCT 2192
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msk03217 269 .................................................. 269
sj06258 2193 TCCAGATTGAAGCTATTCTCCCGCCTCAGCCTCCTGAGTAGCTGGGATTA 2242
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msk03217 269 .................................................. 269
sj06258 2243 CAGGCACCGACCACCACGCCCGACTAATTTTTGTGTTTTTTAGTAGAAAC 2292
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msk03217 269 .................................................. 269
sj06258 2293 GGGGTTTCACCATGCTGGCCAGGGGGTCTCGAACTCCTGACCTCAGGTGA 2342
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msk03217 269 .................................................. 269
sj06258 2343 TCAGCCCACCTTGGCCTCTCAAAGTGCTGGGATTACAGGCATGAGCCACT 2392
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msk03217 269 .................................................. 269
sj06258 2393 GCACCCAGCCCTTCAAGGTATAAGTAAAAAGGGCAAGTGCAAAATAGTGT 2442
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msk03217 269 .................................................. 269
sj06258 2443 GTATGCTATACCACTGCTTGTGTAAAAAGGCGGGGGGAGGATATATTTAG 2492
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msk03217 269 .................................................. 269
sj06258 2493 ATATTGGTATTTGTATGAGTTATCTCTGGGAAAATAGAGGAAATGGATAG 2542
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msk03217 269 .................................................. 269
sj06258 2543 TATGTTTTCTCTGGGGATAAGACCTAGGCAGCTAGCAGAGATAGTTTTTA 2592
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msk03217 269 .................................................. 269
sj06258 2593 CAGAATAAAGGGTCTACCTGCCTCAGCTATGCCTTTTTCCCACTGAGGAA 2642
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msk03217 269 .................................................. 269
sj06258 2643 AGACACAACCCAGGAAGAACGGAACAGCAGGTCTGGATGATATGGGAGTG 2692
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msk03217 269 .................................................. 269
sj06258 2693 TTTCCAGCCATAGTGAGGGGAAAGAGCTAAGACAAACCTATTTCCTGGAA 2742
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msk03217 269 .................................................. 269
sj06258 2743 AAGAAGCATAAAGCCAAAGGGCCTGAGGGCAGCCGCAGGTCTTTTTGAAG 2792
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msk03217 269 .................................................. 269
sj06258 2793 CGATGAGGTGTGCAGAGGCAGATCAGGGGGTATATGTGCAGGGGTTGTGG 2842
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msk03217 269 .................................................. 269
sj06258 2843 GAAGCAGGCCTAAAAGAGGGAAGAGGAAGGTCAGGTCAAGGATGAGGCCA 2892
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msk03217 269 .................................................. 269
sj06258 2893 GGTGCGGTGGCTCACGCCTGTAGTCTCAGCACTTTGGGAGGCTGAGGTGG 2942
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msk03217 269 .................................................. 269
sj06258 2943 GTGGAAAACTTGATGCTAGGAGTTCGAGACCAGCCTGACCAACATGACAA 2992
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msk03217 269 .................................................. 269
sj06258 2993 AACCCCAACTCTACAAAAATTAGCCGGGTATGGTGGCACGCCTTTGTGGT 3042
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msk03217 269 .................................................. 269
sj06258 3043 CCCAGCTGCTTGGGAGGCTGAGGCGGGAAAATCGCTTGAACCTGGGAGGC 3092
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msk03217 269 .................................................. 269
sj06258 3093 AGAGGTTGCAGTGAGCTGAGACGCTCCAACCTGGGCGACAGAGTGAGACT 3142
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msk03217 269 .................................................. 269
sj06258 3143 CCTTCTCAAAAAAAAAAGGATGAGGATCCTTAGAGGGCGTTGAGCATTGG 3192
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msk03217 269 .................................................. 269
sj06258 3193 TCTTATAGCTGGGTTCTTAGCCACCACTGGGAGACGAGGGTGGGAGGGAG 3242
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msk03217 269 .......................................AGGGTATGTCG 279
|||| |||||
sj06258 3243 AGAAGGGAGCTCCGCCTGCCATATCTGGTCGCTTCTTCCAGGGCATGTCA 3292
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msk03217 280 GAGACCTTTGAGACGCTGCACAACCTAGTCCACAAAGGGGTCAAGGTGGT 329
|||||||||||||| | |||||||| || ||||||||||||||||||||
sj06258 3293 GAGACCTTTGAGACATTACACAACCTGGTACACAAAGGGGTCAAGGTGGT 3342
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msk03217 330 GATGGATATCCCCTATGAGCTGTGGAACGAGACCTCAGCAGAGGTGGCTG 379
|||||| |||||||||||||||||||||||||| || |||||||||||||
sj06258 3343 GATGGACATCCCCTATGAGCTGTGGAACGAGACTTCTGCAGAGGTGGCTG 3392
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msk03217 380 ACCTCAAGAAG....................................... 390
|||||||||||
sj06258 3393 ACCTCAAGAAGCAGGTACAGGCCCTTCAGCCCTTGGAAGGGTTGCTGTGC 3442
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msk03217 391 .................................................. 391
sj06258 3443 CCAGTGAGGGGCTGGTGGGGATTGGGTCTGCTCTGAGGAAGTCCACCCAG 3492
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msk03217 391 .................................................. 391
sj06258 3493 GCCGGGGTGGCTTTGGTCAGGTCATTTCACCTCTCTGGCCTCAGTTTCCT 3542
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msk03217 391 .................................................. 391
sj06258 3543 TAGGTGAACCGCTGCCACTGCCTACCTTGCAGTGGGTTGCGAGGCTTAGC 3592
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msk03217 391 .................................................. 391
sj06258 3593 TGAGCTCCTCTAGGAGCGAGTCAGGTGCTGGGGCTTTGCCAATATGAGGT 3642
3651 ----+----*----+----*----+----*----+----*----+----* 3700
Q C D V L V E E F E E V I
msk03217 391 ...........CAGTGTGACGTGCTGGTGGAAGAGTTTGAAGAGGTGATT 429
|||||||| |||||||||||||||||||| ||||||||
sj06258 3643 ATTATGATTAACAGTGTGATGTGCTGGTGGAAGAGTTTGAGGAGGTGATC 3692
Q C D V L V E E F E E V I
3701 ----+----*----+----*----+----*----+----*----+----* 3750
E D W Y R N H Q E E D L T E F L C
msk03217 430 GAGGACTGGTACAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTG 479
||||||||||||||||||||||||||||||||||||||||||||||||||
sj06258 3693 GAGGACTGGTACAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTG 3742
E D W Y R N H Q E E D L T E F L C
3751 ----+----*----+----*----+----*----+----*----+----* 3800
A N H V L K G K D T S C L A E R W
msk03217 480 TGCCAACCACGTGCTGAAGGGAAAGGACACGAGTTGCCTAGCAGAGCGGT 529
||||||||||||||||||||||| ||||| |||||||| ||||||| ||
sj06258 3743 CGCCAACCACGTGCTGAAGGGAAAAGACACCAGTTGCCTGGCAGAGCAGT 3792
A N H V L K G K D T S C L A E Q W
3801 ----+----*----+----*----+----*----+----*----+----* 3850
S G K K G D I A S L G G K K S K
msk03217 530 GGTCTGGCAAGAAGGGGGACATAGCCTCCCTGGGAGGGAAGAAATCCAAG 579
|||| ||||||||||| |||| ||| |||||||||||||||| ||||||
sj06258 3793 GGTCCGGCAAGAAGGGAGACACAGCTGCCCTGGGAGGGAAGAAGTCCAAG 3842
S G K K G D T A A L G G K K S K
3851 ----+----*----+----*----+----*----+----*----+----* 3900
K K R S G V K G S S S G S S K
msk03217 580 AAGAAGCGCAGCGGGGTCAAG......GGCTCCTCCAGTGGCAGCAGCAA 623
|||||| ||||| ||| |||| ||| | ||| ||||||||||
sj06258 3843 AAGAAGAGCAGCAGGGCCAAGGCAGCAGGCGGCAGGAGTAGCAGCAGCAA 3892
K K S S R A K A A G G R S S S S K
3901 ----+----*----+----*----+----*----+----*----+----* 3950
Q R K E L G G L G E D A N A E E
msk03217 624 GCAGAGGAAGGAACTGGGGGGCCTGGGGGAGGATGCCAACGCCGAGGAGG 673
|| |||||||| ||||| ||||| | || || ||| | || ||||
sj06258 3893 ACAAAGGAAGGAGCTGGGTGGCCTTGAGGGAGACCCCAGCCCC...GAGG 3939
Q R K E L G G L E G D P S P E E
3951 ----+----*----+----*----+----*----+----*----+----* 4000
E E G V Q K A S P L P H S P P D
msk03217 674 AGGAGGAGGGTGTGCAGAAGGCATCGCCCCTCCCACACAGCCCCCCTGAT 723
|||| ||||| | ||||||||||| || ||| ||| |||||||||||||
sj06258 3940 AGGATGAGGGCATCCAGAAGGCATCCCCTCTCACACCCAGCCCCCCTGAT 3989
D E G I Q K A S P L T P S P P D
4001 ----+----*----+----*----+----*----+----*----+----* 4050
E L *
msk03217 724 GAGCTGTGAGCCCAGCTTAGTGTCCTTGAATCAAGACCCCTGACTTCAGA 773
||||| |||||||| | | || |||||||||| || |
sj06258 3990 GAGCTCTGAGCCCACCCAGCATCCTCTGTCCTGAGACCCCTGATTTTGAA 4039
E L *
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msk03217 774 GCTTGGGACACGCACAGCACAGCGCAGCTCCAGCAAGGACAGCTGCTGTA 823
||| ||| |
sj06258 4040 GCTGAGGAGTC....................................... 4050
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msk03217 824 CAGCGTCAGGTCTCCTCCCTTGGCTGTGCCCCTTTCCTTCCCTTCAACAA 873
sj06258 4051 .................................................. 4051
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msk03217 874 CAGCAAGAGGTGGAAGGATCTGGGGTGCTGGGAGACGGCACCCCAAAGGG 923
||| | | || ||||| || ||||
sj06258 4051 .......AGGGGCATGGCTCTGGCAGGCCGGGA................. 4076
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msk03217 924 AAGAGGAGGAGGAGCAGAAGGCAGCTCCCTTTCTACACAGTCCCCCTCAC 973
|| | ||| || |||| | || | || |||
sj06258 4077 ...TGGCCCCGCAGCCTTCAGCCCCTCCTTGCCTTGGCTGTGCCC..... 4118
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msk03217 974 GAGCTCCGGGGTCCACCCAGCATCCCCAGGCTGAGATCCAGGCTCCTGAC 1023
|| ||| |
sj06258 4119 .........................................TCTTCTGCC 4127
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msk03217 1024 ATGGAAGCTGAAGAGCATGAGGCACATAAGATGCTCACCAGCGCCCCCTT 1073
| |||| | |||
sj06258 4128 AAGGAAAGACACAAGC.................................. 4143
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msk03217 1074 CAGCCAGGAAGGACTCCGTGCAGCCTCAG..CAGCCAGGCCTGCCTCTTC 1121
|||||||| |||| | || | | | ||| ||| ||| | |
sj06258 4144 ..CCCAGGAAGAACTCAGAGCCGTCATGGGTAGCCCACGCCGTCCTTTCC 4191
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msk03217 1122 CTTCCACCAAGCATTCTCTTCTG....CTGGTCCTTGTCGGATGGTAAAT 1167
| ||| | | |||||| ||| ||| | | || |
sj06258 4192 CCTCCCCAAGTGTTTCTCTCCTGACCCAGGGTTCAGGCAGGCCTTGTGGT 4241
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msk03217 1168 TCGAGAACTTCCAGGACAAACTCGGGTGTG.GCACAAAGGGGCTGGACGC 1216
| || ||| | ||| |||| ||||| | || ||| | |
sj06258 4242 TTCAGGACTGCAAGG....ACTCCAGTGTGAACTCAGGAGGGGCAGGTGT 4287
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msk03217 1217 CAGAGCCAGAGCCACGCCAGAGACTGCAGAGAGGGCACCTGACCT..AAC 1264
|||| | ||||||| | || | |
sj06258 4288 CAGA.........................ACTGGGCACCAGGACTGGAGC 4312
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msk03217 1265 CCCCCTGGGAAGCCAATCTGCTGTTCCCGTGTCCTCCCACTCCTCCTGAG 1314
|||| ||| |||| || ||| | || |||||| |
sj06258 4313 CCCCTCCGGAGACCAAACTCACCATCC........CTCAGTCCTCCCCAA 4354
4601 ----+----*----+----*----+----*----+----*----+----* 4650
msk03217 1315 GACGCCTCATGCTCTGCCCAGCCCTTCTCCCAGGGCTACCAGAGTAAACA 1364
| | | | |||| ||||
sj06258 4355 CAGGGTACTAGGACTGCAGCCCCCT......................... 4379
4651 ----+----*----+----*----+----*----+----*----+----* 4700
msk03217 1365 CCTTTTGGCCTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTG 1414
sj06258 4380 .................................................. 4380
4701 ----+----*----+----*----+----*----+----*----+----* 4750
msk03217 1415 TCCCCTTATCGATCTTTTTTGCCTTTGTCCCCCAATCCCAGGGGCTGGAA 1464
sj06258 4380 .................................................. 4380
4751 ----+----*----+----*----+----*----+----*----+----* 4800
msk03217 1465 GGCCATCACCATCATTGGAGGCTTAACCTGTCAGTTACTAGGAGGTGCTG 1514
sj06258 4380 .................................................. 4380
4801 ----+----*----+----*----+----*----+----*----+----* 4850
msk03217 1515 GGAGCGCCCGGGGTTGGTTTGGGGTAATCACTCACTGGTTTCTAACACTG 1564
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sj06258 4380 .......................GTAGCTCCTCTCTGCTTACCCCTCCTG 4406
4851 ----+----*----+----*----+----*----+----*----+----* 4900
msk03217 1565 CAGCCCCTTAATACAGTTCCTTCTGTTGTGGTGACTCCCCCACGCCCCCA 1614
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sj06258 4407 TGGACACCTTGCACTCTGCCT......................GGCCCTT 4434
4901 ----+----*----+----*----+----*----+----*- 4941
msk03217 1615 CCCACACACACACCATAAAATTATTTTCGTTGCTGTTTCAT 1655
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sj06258 4435 CCCAGAGCCCAAAGAGTAAAAATGTTCTGGTTCTG...... 4469