Comparison of KIAA cDNA sequences between mouse and human (KIAA1949)
<<Original sequence data>>
mouse mKIAA1949 (msk03095) length: 1347 bp, CDS: 3 - 566
human KIAA1949 (fj02913) length: 4015 bp, CDS: 1149 - 3137
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 2575 - 2576 2 0 0.0
CDS: 2577 - 3146 489 68 12.2
3'UTR: 3147 - 4046 546 221 28.8
amino acid
CDS: 2577 - 3146 162 25 13.4
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msk03095 1 .................................................. 1
fj02913 1 AGACAAAGCGGTCGCCGCCCCCGCCCGGCCCCCTGGTCTCTGTCTCCGTC 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msk03095 1 .................................................. 1
fj02913 51 CCTCCTCCTTTGCTGCCTCTTTCCCTCCTCCTCTCCCTCCCTCCTCCCCT 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msk03095 1 .................................................. 1
fj02913 101 CCCTCCAGTCTCCGGATCTCCCTCGGTCCCTCTCTCCTCCTCTTCCTCTC 150
151 ----+----*----+----*----+----*----+----*----+----* 200
msk03095 1 .................................................. 1
fj02913 151 TCTGGACGCCCGGCTCCTCCGCACCCCCTCCCCCGGGGGTCCCGCGGCCT 200
201 ----+----*----+----*----+----*----+----*----+----* 250
msk03095 1 .................................................. 1
fj02913 201 GTGAGTTGACTGAGGGGCTCAGACTTGGGGAGTGGGTGTCTCCTCGCCCC 250
251 ----+----*----+----*----+----*----+----*----+----* 300
msk03095 1 .................................................. 1
fj02913 251 TGTCCTTGCTCCCGTCCCTGGCCCGGACCTTGGCTGTCTCCTCTTTGTGC 300
301 ----+----*----+----*----+----*----+----*----+----* 350
msk03095 1 .................................................. 1
fj02913 301 CGAGATTGTCAGTCTGTGCGGCTACAGCGGGGTGGAGACGGCCGGCTCTG 350
351 ----+----*----+----*----+----*----+----*----+----* 400
msk03095 1 .................................................. 1
fj02913 351 TCACGGCTTCATGAGAGCGGGGACGGGGCGCAGGACTTGCAGGCGCCGGG 400
401 ----+----*----+----*----+----*----+----*----+----* 450
msk03095 1 .................................................. 1
fj02913 401 GAGAAGAGACATGGAGCCGGCCCTTGGCACTCTGGGGTCGCGTGGGGCAG 450
451 ----+----*----+----*----+----*----+----*----+----* 500
msk03095 1 .................................................. 1
fj02913 451 TCGGTGGGGGAGGCAGGCGGTGGTGACAGGACAGGGTGGGGGTGGACGCC 500
501 ----+----*----+----*----+----*----+----*----+----* 550
msk03095 1 .................................................. 1
fj02913 501 AGGGTTCTGGGAACGCGCTGGCAGCCCTGACGCCCGGGTTCCGAAAGTCT 550
551 ----+----*----+----*----+----*----+----*----+----* 600
msk03095 1 .................................................. 1
fj02913 551 CGGGGGTGGCTATTTCCCCCGACCCGCCTCGGGGGCGGAGTGCGGGGCAG 600
601 ----+----*----+----*----+----*----+----*----+----* 650
msk03095 1 .................................................. 1
fj02913 601 AGGGGTGGGGGCTGGGGAGAGGCGTGGCCCGAGCGGTGCTGGAAGCGGAG 650
651 ----+----*----+----*----+----*----+----*----+----* 700
msk03095 1 .................................................. 1
fj02913 651 CCGGGACCTTTGGGGCCCGCGCTGAGACGCGCCCGGCTGCTGCCGCCGCC 700
701 ----+----*----+----*----+----*----+----*----+----* 750
msk03095 1 .................................................. 1
fj02913 701 CTCCTTTCCCCTCTTCCCTGGTTTCCCTTCTCCTCTAGACCTGTTCGCTC 750
751 ----+----*----+----*----+----*----+----*----+----* 800
msk03095 1 .................................................. 1
fj02913 751 TCCGCCCCTCCTTGCCTCCCCAACACCCCCTCAGGTCCCGTTGCCTCCTG 800
801 ----+----*----+----*----+----*----+----*----+----* 850
msk03095 1 .................................................. 1
fj02913 801 GTCCTTTCAGGGATTCCTGGTCCTTCCTTCCCACACTAGCCTCCCTGGGG 850
851 ----+----*----+----*----+----*----+----*----+----* 900
msk03095 1 .................................................. 1
fj02913 851 TATCGCTGAGGCAGCCTGGCCTGCACCCAGGTTCCCCTCACCCCTGCCAC 900
901 ----+----*----+----*----+----*----+----*----+----* 950
msk03095 1 .................................................. 1
fj02913 901 ATTTCTCTCTTCTCCCTCACGCCAACTTTCCTTTTCGCCCTTCTCTCTCT 950
951 ----+----*----+----*----+----*----+----*----+----* 1000
msk03095 1 .................................................. 1
fj02913 951 TTCTCACATCCTAGAGACGGTCTTTAATACGCATTAACCCTGTGCTGCCA 1000
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msk03095 1 .................................................. 1
fj02913 1001 CATCTGGCTCCTGCCCTCATTGCCTCCAATCCGGACTCTTCCTCTCACAT 1050
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msk03095 1 .................................................. 1
fj02913 1051 CACCCCCACCACCCCCAACTTGGGCTCACAACTTCTCTTCACTTTTTCCA 1100
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msk03095 1 .................................................. 1
fj02913 1101 TTTCCCCAGTTCTCTGCCTTCCGTCTTTCCCTCTGTCCTCATCCTTAGCC 1150
P
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msk03095 1 .................................................. 1
fj02913 1151 CCTCTGCCCTGCTTTGTGTCCCACCTCTCCCCCTCCACTTCCTCTCCTCC 1200
L C P A L C P T S P P P L P L L P
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msk03095 1 .................................................. 1
fj02913 1201 CACCCTCAGTCTCACCCCCGGGCTGTCTCACTCTCTGGAGCCTCTCCTTC 1250
P S V S P P G C L T L W S L S F
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msk03095 1 .................................................. 1
fj02913 1251 CTGTTCTCTGTCCCCAGTGCTCCCTACCCTCACCTCAAGACGACCATGGC 1300
L F S V P S A P Y P H L K T T M A
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msk03095 1 .................................................. 1
fj02913 1301 CACCATCCCAGACTGGAAGCTACAGCTGCTAGCCCGGCGCCGGCAGGAGG 1350
T I P D W K L Q L L A R R R Q E E
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msk03095 1 .................................................. 1
fj02913 1351 AGGCGTCCGTTCGAGGCCGAGAGAAAGCAGAACGGGAGCGCCTGTCCCAG 1400
A S V R G R E K A E R E R L S Q
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msk03095 1 .................................................. 1
fj02913 1401 ATGCCAGCCTGGAAACGAGGGCTCCTGGAGCGCCGCCGGGCCAAGCTTGG 1450
M P A W K R G L L E R R R A K L G
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msk03095 1 .................................................. 1
fj02913 1451 GCTGTCCCCTGGGGAGCCTAGCCCTGTGCTAGGGACTGTAGAGGCTGGAC 1500
L S P G E P S P V L G T V E A G P
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msk03095 1 .................................................. 1
fj02913 1501 CTCCAGACCCGGATGAGTCTGCGGTCCTTCTGGAGGCCATCGGGCCAGTG 1550
P D P D E S A V L L E A I G P V
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msk03095 1 .................................................. 1
fj02913 1551 CACCAGAACCGATTCATCCGGCAGGAGCGGCAGCAGCAGCAGCAGCAACA 1600
H Q N R F I R Q E R Q Q Q Q Q Q Q
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msk03095 1 .................................................. 1
fj02913 1601 ACAACGGAGTGAAGAGCTGCTAGCAGAGAGAAAGCCTGGGCCTCTGGAGG 1650
Q R S E E L L A E R K P G P L E A
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msk03095 1 .................................................. 1
fj02913 1651 CCCGGGAGCGGAGACCCAGCCCTGGGGAGATGCGGGATCAGAGCCCCAAG 1700
R E R R P S P G E M R D Q S P K
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msk03095 1 .................................................. 1
fj02913 1701 GGAAGAGAGTCAAGAGAAGAGAGACTAAGTCCGAGGGAGACCAGAGAGAG 1750
G R E S R E E R L S P R E T R E R
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msk03095 1 .................................................. 1
fj02913 1751 GAGGCTGGGGATAGGGGGAGCCCAAGAGTTGAGCCTGAGGCCTCTGGAGG 1800
R L G I G G A Q E L S L R P L E A
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msk03095 1 .................................................. 1
fj02913 1801 CTCGGGACTGGAGGCAAAGCCCAGGAGAGGTGGGAGACAGGAGCTCCCGA 1850
R D W R Q S P G E V G D R S S R
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msk03095 1 .................................................. 1
fj02913 1851 CTGTCAGAGGCATGGAAATGGAGGCTGAGTCCTGGAGAAACTCCAGAGCG 1900
L S E A W K W R L S P G E T P E R
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msk03095 1 .................................................. 1
fj02913 1901 GAGTCTGAGACTAGCAGAGTCTCGAGAGCAAAGCCCCAGGAGAAAAGAGG 1950
S L R L A E S R E Q S P R R K E V
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msk03095 1 .................................................. 1
fj02913 1951 TGGAAAGTAGACTGAGCCCAGGGGAATCTGCCTACCAGAAGTTGGGCCTG 2000
E S R L S P G E S A Y Q K L G L
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msk03095 1 .................................................. 1
fj02913 2001 ACAGAGGCCCATAAATGGAGACCTGACTCCAGAGAGTCTCAGGAACAGAG 2050
T E A H K W R P D S R E S Q E Q S
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msk03095 1 .................................................. 1
fj02913 2051 TTTGGTACAACTGGAGGCAACAGAGTGGAGGCTGAGGTCAGGAGAAGAAA 2100
L V Q L E A T E W R L R S G E E R
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msk03095 1 .................................................. 1
fj02913 2101 GACAAGACTACTCGGAAGAATGTGGGAGAAAAGAAGAGTGGCCAGTTCCA 2150
Q D Y S E E C G R K E E W P V P
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msk03095 1 .................................................. 1
fj02913 2151 GGGGTAGCTCCAAAAGAGACTGCAGAGCTGTCCGAGACCCTGACAAGGGA 2200
G V A P K E T A E L S E T L T R E
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msk03095 1 .................................................. 1
fj02913 2201 GGCCCAAGGCAACAGTTCCGCAGGAGTGGAGGCAGCAGAGCAGAGGCCTG 2250
A Q G N S S A G V E A A E Q R P V
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msk03095 1 .................................................. 1
fj02913 2251 TGGAAGATGGCGAGAGGGGCATGAAGCCAACAGAAGGGTGGAAATGGACC 2300
E D G E R G M K P T E G W K W T
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msk03095 1 .................................................. 1
fj02913 2301 CTGAACTCCGGGAAGGCTCGAGAATGGACACCCAGGGACATAGAGGCTCA 2350
L N S G K A R E W T P R D I E A Q
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msk03095 1 .................................................. 1
fj02913 2351 AACTCAGAAACCAGAACCTCCAGAGTCAGCAGAGAAGCTTCTGGAATCTC 2400
T Q K P E P P E S A E K L L E S P
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msk03095 1 .................................................. 1
fj02913 2401 CCGGTGTGGAGGCTGGAGAAGGGGAGGCTGAGAAGGAGGAGGCGGGGGCT 2450
G V E A G E G E A E K E E A G A
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msk03095 1 .................................................. 1
fj02913 2451 CAGGGCAGGCCTCTGAGAGCCCTGCAGAACTGCTGCTCTGTGCCCTCCCC 2500
Q G R P L R A L Q N C C S V P S P
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msk03095 1 .................................................. 1
fj02913 2501 CCTCCCACCAGAGGACGCTGGGACTGGAGGCCTGAGACAGCAGGAAGAGG 2550
L P P E D A G T G G L R Q Q E E E
2551 ----+----*----+----*----+----*----+----*----+----* 2600
P A P L S P P P
msk03095 1 ........................CACCAGCCCCTCTGTCTCCCCCACCC 26
||||||||||||||||||||||||||
fj02913 2551 AAGCAGTGGAGCTCCAGCCCCCACCACCAGCCCCTCTGTCTCCCCCACCC 2600
A V E L Q P P P P A P L S P P P
2601 ----+----*----+----*----+----*----+----*----+----* 2650
S A P T A P Q P S G D P L M S R L
msk03095 27 TCGGCCCCAACTGCCCCCCAACCCTCTGGGGATCCCCTCATGAGCCGTCT 76
| |||||||||||||||||||| |||||||||||||||||||||| ||
fj02913 2601 CCAGCCCCAACTGCCCCCCAACCTCCTGGGGATCCCCTCATGAGCCGCCT 2650
P A P T A P Q P P G D P L M S R L
2651 ----+----*----+----*----+----*----+----*----+----* 2700
F Y G V K P G P G V G A P R R S G
msk03095 77 GTTCTATGGGGTGAAACCAGGACCGGGGGTGGGGGCCCCCCGCCGCAGTG 126
||||||||||||||| |||| || |||||||||||||||||||||||||
fj02913 2651 GTTCTATGGGGTGAAGGCAGGGCCAGGGGTGGGGGCCCCCCGCCGCAGTG 2700
F Y G V K A G P G V G A P R R S G
2701 ----+----*----+----*----+----*----+----*----+----* 2750
H T F T V N P R R C A P P A S P
msk03095 127 GACACACCTTCACTGTCAACCCACGGAGGTGTGCGCCCCCTGCCAGCCCA 176
||||||||||||| |||||||| ||| ||| || ||||||||| | ||||
fj02913 2701 GACACACCTTCACCGTCAACCCCCGGCGGTCTGTGCCCCCTGCGACCCCA 2750
H T F T V N P R R S V P P A T P
2751 ----+----*----+----*----+----*----+----*----+----* 2800
A P P V N P A T A D A A G S G S G
msk03095 177 GCCCCTCCAGTCAACCCTGCTACAGCTGATGCTGCAGGGTCTGGATCTGG 226
||| | ||| | || || |||| ||||||||||| | || ||||
fj02913 2751 GCCACCCCAACCTCTCCAGCCACAGTTGATGCTGCAGTCCCGGGGGCTGG 2800
A T P T S P A T V D A A V P G A G
2801 ----+----*----+----*----+----*----+----*----+----* 2850
K K R Y P T A E E I L V L G G Y L
msk03095 227 GAAGAAGCGGTACCCAACTGCAGAGGAGATCTTGGTGCTGGGGGGCTACC 276
||||||||||||||||||||| |||||||||||||| |||||||||||||
fj02913 2801 GAAGAAGCGGTACCCAACTGCCGAGGAGATCTTGGTTCTGGGGGGCTACC 2850
K K R Y P T A E E I L V L G G Y L
2851 ----+----*----+----*----+----*----+----*----+----* 2900
R L S R S C L V K G S P E R H H
msk03095 277 TCCGTCTCAGCCGCAGCTGCCTTGTCAAGGGGTCCCCTGAAAGACATCAC 326
|||||||||||||||||||||||| |||||||||||| |||||||| |||
fj02913 2851 TCCGTCTCAGCCGCAGCTGCCTTGCCAAGGGGTCCCCCGAAAGACACCAC 2900
R L S R S C L A K G S P E R H H
2901 ----+----*----+----*----+----*----+----*----+----* 2950
K Q L K I S F S E T A L E T T Y Q
msk03095 327 AAACAGCTCAAGATCTCCTTTAGTGAGACAGCCCTGGAGACCACATACCA 376
|||||||| ||||||||||| || |||||||||||||||||||| |||||
fj02913 2901 AAACAGCTTAAGATCTCCTTCAGCGAGACAGCCCTGGAGACCACGTACCA 2950
K Q L K I S F S E T A L E T T Y Q
2951 ----+----*----+----*----+----*----+----*----+----* 3000
Y P S E S S V L E D L G P E P E T
msk03095 377 ATACCCTTCTGAGAGCTCGGTACTGGAGGATCTAGGCCCGGAGCCTGAGA 426
|||||| || ||||| |||||||||||||| || |||||||||||||||
fj02913 2951 ATACCCCTCCGAGAGTTCGGTACTGGAGGAGCTGGGCCCGGAGCCTGAGG 3000
Y P S E S S V L E E L G P E P E V
3001 ----+----*----+----*----+----*----+----*----+----* 3050
P I A P L A T Q P D E E E E
msk03095 427 CCCCCATTGCCCCC......TTAGCAACCCAGCCTGACGAGGAGGAGGAG 470
||||| ||||||| |||| |||| || ||||| || |||||
fj02913 3001 TCCCCAGTGCCCCCAACCCTCCAGCAGCCCAACCCGACGACGAAGAGGAT 3050
P S A P N P P A A Q P D D E E D
3051 ----+----*----+----*----+----*----+----*----+----* 3100
E E E E L L L Q P G L Q G G
msk03095 471 GAGGAGGAGGAAGAGGAGGAGTTGCTTCTGCAGCCTGGGCTCCAGGGCGG 520
||| || ||| | |||| |||||||| | ||||||||||||
fj02913 3051 GAG.........GAAGAGCTGCTGCTGCTGCAGCCAGAGCTCCAGGGCGG 3091
E E E L L L L Q P E L Q G G
3101 ----+----*----+----*----+----*----+----*----+----* 3150
L R T K A L I V D E S C R R *
msk03095 521 GCTGCGCACCAAGGCCCTAATCGTGGATGAGTCCTGCCGGCGGTGACCAT 570
|||||||||||||||||| || ||||||||||||||||||||||||||||
fj02913 3092 GCTGCGCACCAAGGCCCTGATTGTGGATGAGTCCTGCCGGCGGTGACCAT 3141
L R T K A L I V D E S C R R *
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msk03095 571 CTTCCAGTTTGGGCGCATACCTCCTTCCTTCCTTCCTTCCTGTACCTGAA 620
|||||| | || ||||| ||| |||||| | || |||||
fj02913 3142 CTTCCAACATAGGGATATACC........TCCCTCCTTCTTATAACTGAA 3183
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msk03095 621 GCTTCTGGAGTCTGGATGATTCAGAGCCGACAGACCTGGCAGGGAGCCTG 670
| | |||||| | ||| ||||||| || |||||||| | | | |
fj02913 3184 GATCCTGGAGCCCGGAAGATTCAGGGCAGACAGACC...CTGATAATGAG 3230
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msk03095 671 CCTGGCAGGGAAGGGGGTTGAGCATATTCTGACTTGCTTTTCCCATCCCA 720
||||||||||||||| | ||| || | ||||||||| |||| ||
fj02913 3231 CCTGGCAGGGAAGGGCAACCAACATCTTGTAACTTGCTTTCCCCACCCTG 3280
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msk03095 721 TTTCT.GGGGCAGAGCCAGTAGCCTAAATTTACCCCTAACTCAGGGTGTT 769
||||| |||||||||||| | ||| || || |||||| || ||
fj02913 3281 TTTCTGGGGGCAGAGCCAATTGCCCAATTTCTACCCTAATCCAAAGTCCC 3330
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msk03095 770 TCCCGTGGGTG.............................ACCTAAGAGT 790
| ||||||| | | ||||||
fj02913 3331 TGGTGTGGGTGGGGTTAAACGTGCTGGTGCATCCTAGGTCATCCAAGAGT 3380
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msk03095 791 GAGCATCAAGTCCTGGGTTGGAACTCAGAAGT.GATCTGGAATTGAGATG 839
|||| ||||||||| | || | ||||| | | | | ||||||
fj02913 3381 GAGCGCCAAGTCCTGAGAAGGGGCACAGAACTCCCTGGAGGGTGGAGATG 3430
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msk03095 840 GAGCACC...................CCCTAGCCCTGCAGCCTTCCTTAA 870
||||||| | || ||| ||||||||||
fj02913 3431 GAGCACCTGCCCCCCATGGCAGGGTACACTCTCCCCACAGCCTTCCT... 3477
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msk03095 871 CTCCCAGCAACTCCCGGGGAC............................. 891
|||| || | | ||||||
fj02913 3478 .CCCCACCATCCCGTGGGGACTCTCGGGATTTAAGCACTCGTCTCTCTGG 3526
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msk03095 892 ...........................CTACAGACACCCCTTTTTCTAGG 914
||| | | ||| |||||
fj02913 3527 GAGGCCCAGACCCCACTCCATTTATAGGCACATCTCCTTCATTTCCTAGG 3576
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msk03095 915 TCACTACCCCTTCGTTTACAG...CTTCCTTCTCTCTTGATCACAGCCTG 961
||||| |||||| |||||||| || ||| ||| ||||| |||||||||
fj02913 3577 TCACTGCCCCTTTGTTTACAGCTCCTGCCTCCTCCCTTGACCACAGCCTG 3626
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msk03095 962 GTTTACATTACCCCCCCCCCCCCAGCTCCCAGTCCCACCTG.CGAAGTCC 1010
||||||| || |||||||||| |||||||| | ||||||
fj02913 3627 GTTTACA.......AATTCCATCAGCTCCCAGCCCCACCTGCCAAAGTCC 3669
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msk03095 1011 CAGGTTTACAAGCCATGCCTACCCACGGAGAGCCCCCGTGGGACCCTCCA 1060
||||||||||||||| || ||| | | | | | | ||||
fj02913 3670 CAGGTTTACAAGCCACGCTTACTTGCTGTGTCTGCGTGGAATTCTCTCCT 3719
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msk03095 1061 CCTTCCCACCGTTTCATTGAGAGTGACTTGGGAAGGTGTGTGGCCTTCTT 1110
| |||| | || || | ||||||| | ||
fj02913 3720 CTGTCCCCTCCAGTCTCCTCATTGGAGTGACCTGAAGGTGTGGCTTCCTC 3769
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msk03095 1111 CAACTTTGCTCAGTATTACTGTGCCTCGGTTTCCCCCAAGAGGGAAGGCT 1160
|| ||| |||||||||||| ||||| |||| |||||||||||||||||
fj02913 3770 CACTTTTTCTCAGTATTACTTTGCCTTAGTTTTCCCCAAGAGGGAAGGCT 3819
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msk03095 1161 GGGGATCCTAACCCTGAACCCCATGAAAGTTATTTAATTCTGTTTCTCTG 1210
|| || |||| ||| ||||| ||| |||||||||||||||||||||
fj02913 3820 GGAACTCTTAACTCTGTACCCCTTGATAGTTATTTAATTCTGTTTCTCCT 3869
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msk03095 1211 TGTGGTTCA.TATTGAATTGAACTG...CAGCGTGGGGGTGCTAAGGAAG 1256
|||||||| |||||| |||| || | || ||| ||||||||
fj02913 3870 AGTGGTTCACAATTGAACTGAATTGAGATGGTGTCGGGTGGCTAAGGAGA 3919
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msk03095 1257 TGCTTCGCTTCCC.........TGGCGCTCCTTTGTCAGCTGCCTGATTT 1297
| || | || | || | ||||| ||| |||||| |||
fj02913 3920 CACCTCACCTCTCCTTCCCCATTGTGCCGCCTTTATCAATTGCCTGTTTT 3969
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msk03095 1298 GTATCGT...TTTTGTAACTTTCCATAATAAAATGGAGCTCTTTTCAACT 1344
|| | || |||| ||||||||||||||||||||||| ||| |||
fj02913 3970 GTTTTGTTTGTTTTTTAACTTTCCATAATAAAATGGAGTTCTCTTC.... 4015
4051 --- 4053
msk03095 1345 CTC 1347
fj02913 4016 ... 4016