# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msk03045.fasta.nr -Q ../query/mFLJ00332.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00332, 439 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918181 sequences Expectation_n fit: rho(ln(x))= 5.3871+/-0.000187; mu= 10.8707+/- 0.010 mean_var=83.6454+/-16.121, 0's: 30 Z-trim: 47 B-trim: 34 in 1/65 Lambda= 0.140234 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|47847510|dbj|BAD21427.1| mFLJ00332 protein [Mus ( 439) 3037 624.0 2.2e-176 gi|148701081|gb|EDL33028.1| TBC1 domain family, me ( 276) 1667 346.7 4.3e-93 gi|81899517|sp|Q8C9V1.1|TB10C_MOUSE RecName: Full= ( 444) 1527 318.5 2e-84 gi|149061961|gb|EDM12384.1| similar to DKFZP434P17 ( 446) 1447 302.3 1.5e-79 gi|26344644|dbj|BAC35971.1| unnamed protein produc ( 382) 1436 300.0 6.4e-79 gi|109105208|ref|XP_001106367.1| PREDICTED: simila ( 446) 1401 293.0 9.7e-77 gi|74728014|sp|Q8IV04.1|TB10C_HUMAN RecName: Full= ( 446) 1393 291.4 3e-76 gi|194218529|ref|XP_001917525.1| PREDICTED: TBC1 d ( 446) 1393 291.4 3e-76 gi|151555954|gb|AAI49745.1| TBC1D10C protein [Bos ( 353) 1380 288.7 1.5e-75 gi|73982837|ref|XP_864754.1| PREDICTED: similar to ( 438) 1380 288.8 1.8e-75 gi|73982839|ref|XP_851990.1| PREDICTED: similar to ( 446) 1379 288.6 2.1e-75 gi|119595020|gb|EAW74614.1| TBC1 domain family, me ( 398) 1256 263.6 6e-68 gi|119595018|gb|EAW74612.1| TBC1 domain family, me ( 220) 1248 261.8 1.2e-67 gi|119595021|gb|EAW74615.1| TBC1 domain family, me ( 241) 1248 261.8 1.3e-67 gi|74187035|dbj|BAE20537.1| unnamed protein produc ( 167) 1094 230.5 2.3e-58 gi|26353056|dbj|BAC40158.1| unnamed protein produc ( 179) 1093 230.4 2.8e-58 gi|119595019|gb|EAW74613.1| TBC1 domain family, me ( 310) 960 203.7 5.3e-50 gi|194678420|ref|XP_591615.4| PREDICTED: similar t ( 860) 898 191.5 6.9e-46 gi|194219046|ref|XP_001501570.2| PREDICTED: TBC1 d ( 763) 895 190.8 9.5e-46 gi|222079994|dbj|BAH16638.1| TBC1 domain family, m ( 653) 893 190.4 1.1e-45 gi|126334630|ref|XP_001371043.1| PREDICTED: simila ( 685) 892 190.2 1.3e-45 gi|166227892|sp|Q4KMP7.2|TB10B_HUMAN RecName: Full ( 533) 887 189.1 2.2e-45 gi|38648805|gb|AAH63112.1| TBC1D10B protein [Homo ( 622) 887 189.1 2.5e-45 gi|68534049|gb|AAH98419.1| TBC1D10B protein [Homo ( 668) 887 189.2 2.7e-45 gi|149067755|gb|EDM17307.1| TBC1 domain family, me ( 795) 887 189.2 3e-45 gi|167614488|ref|NP_056342.3| TBC1 domain family, ( 808) 887 189.2 3.1e-45 gi|114662033|ref|XP_510925.2| PREDICTED: TBC1 doma ( 810) 885 188.8 4.1e-45 gi|15076925|gb|AAK82984.1|AF285112_1 unknown WZ3-8 ( 537) 879 187.5 6.9e-45 gi|81896125|sp|Q8BHL3.1|TB10B_MOUSE RecName: Full= ( 537) 879 187.5 6.9e-45 gi|167614490|ref|NP_653105.3| TBC1 domain family, ( 798) 879 187.6 9.3e-45 gi|148685561|gb|EDL17508.1| TBC1 domain family, me ( 817) 879 187.6 9.5e-45 gi|23337074|gb|AAH37230.1| TBC1 domain family, mem ( 500) 865 184.6 4.7e-44 gi|20454885|sp|P58802.1|TB10A_MOUSE RecName: Full= ( 500) 864 184.4 5.4e-44 gi|62433282|dbj|BAD95469.1| potential RabGAP [Ratt ( 505) 864 184.4 5.4e-44 gi|109093822|ref|XP_001108536.1| PREDICTED: simila ( 508) 864 184.4 5.4e-44 gi|20454903|sp|Q9BXI6.1|TB10A_HUMAN RecName: Full= ( 508) 864 184.4 5.4e-44 gi|219521163|gb|AAI71775.1| TBC1 domain family, me ( 508) 864 184.4 5.4e-44 gi|148745212|gb|AAI43052.1| TBC1 domain family, me ( 508) 864 184.4 5.4e-44 gi|56206490|emb|CAI25746.1| TBC1 domain family, me ( 534) 864 184.4 5.6e-44 gi|109093818|ref|XP_001108039.1| PREDICTED: simila ( 606) 864 184.5 6.2e-44 gi|74183856|dbj|BAE24505.1| unnamed protein produc ( 500) 862 184.0 7.1e-44 gi|154426130|gb|AAI51383.1| TBC1D10A protein [Bos ( 506) 859 183.4 1.1e-43 gi|152013005|gb|AAI50188.1| TBC1 domain family, me ( 508) 859 183.4 1.1e-43 gi|194043214|ref|XP_001929232.1| PREDICTED: simila ( 511) 859 183.4 1.1e-43 gi|73995420|ref|XP_543476.2| PREDICTED: similar to ( 555) 855 182.6 2e-43 gi|118098834|ref|XP_415301.2| PREDICTED: similar t ( 474) 853 182.2 2.4e-43 gi|119580280|gb|EAW59876.1| TBC1 domain family, me ( 515) 853 182.2 2.6e-43 gi|109093824|ref|XP_001107929.1| PREDICTED: simila ( 515) 853 182.2 2.6e-43 gi|54647657|gb|AAH84964.1| LOC495442 protein [Xeno ( 504) 849 181.4 4.4e-43 gi|114685824|ref|XP_001139751.1| PREDICTED: TBC1 d ( 515) 847 181.0 5.9e-43 >>gi|47847510|dbj|BAD21427.1| mFLJ00332 protein [Mus mus (439 aa) initn: 3037 init1: 3037 opt: 3037 Z-score: 3322.9 bits: 624.0 E(): 2.2e-176 Smith-Waterman score: 3037; 100.000% identity (100.000% similar) in 439 aa overlap (1-439:1-439) 10 20 30 40 50 60 mFLJ00 QQGACDTGVQGRMAQALGEDLLSELQDDSSSLGSDSELSGPSPYRQADRYGFIGGNSGEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 QQGACDTGVQGRMAQALGEDLLSELQDDSSSLGSDSELSGPSPYRQADRYGFIGGNSGEL 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 RLCQPSADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIPSALRARCWPLLCGARM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 RLCQPSADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIPSALRARCWPLLCGARM 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 CQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 CQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYTLY 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 RPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHMLPRVYKHLQQVGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 RPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHMLPRVYKHLQQVGVG 190 200 210 220 230 240 250 260 270 280 290 300 mFLJ00 PLLYLPEWFLCLFTRSLPFPTVLRIWDAFLSEGAKVLFRVGLTLMRLALGTVEQRTACPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 PLLYLPEWFLCLFTRSLPFPTVLRIWDAFLSEGAKVLFRVGLTLMRLALGTVEQRTACPG 250 260 270 280 290 300 310 320 330 340 350 360 mFLJ00 LLETLGALRAIPPTQLQEEVFMSQVHSVTLSERVLQQEIRIQLAQLSKSLPGPAPLPQAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 LLETLGALRAIPPTQLQEEVFMSQVHSVTLSERVLQQEIRIQLAQLSKSLPGPAPLPQAR 310 320 330 340 350 360 370 380 390 400 410 420 mFLJ00 LPGAQAIFESQQLAGVRESTKPEIPRIVVQPPEEPKPPRRKPQTRGKTFHGLLIRARGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 LPGAQAIFESQQLAGVRESTKPEIPRIVVQPPEEPKPPRRKPQTRGKTFHGLLIRARGPP 370 380 390 400 410 420 430 mFLJ00 IEGPSRSQRGSASFLDTRF ::::::::::::::::::: gi|478 IEGPSRSQRGSASFLDTRF 430 >>gi|148701081|gb|EDL33028.1| TBC1 domain family, member (276 aa) initn: 1673 init1: 1422 opt: 1667 Z-score: 1827.7 bits: 346.7 E(): 4.3e-93 Smith-Waterman score: 1667; 93.431% identity (95.620% similar) in 274 aa overlap (167-439:9-276) 140 150 160 170 180 190 mFLJ00 GDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYTLYRPEQGYCQAQGPVAAV .::::::::::::::::::::::::::::: gi|148 DVCVTPGTRQGLLQVLKAYTLYRPEQGYCQAQGPVAAV 10 20 30 200 210 220 230 240 250 mFLJ00 LLMHLPPEEAFWCLVQI-CEVYLPGYYGPHMLPRVYKHLQQVGVGPLLYLPEWFLCLFTR :::::::::: ::. ::.. ..::::::::::::::::::::::::::::: gi|148 LLMHLPPEEA----VQLDAEVFMALLR--RQLPRVYKHLQQVGVGPLLYLPEWFLCLFTR 40 50 60 70 80 90 260 270 280 290 300 310 mFLJ00 SLPFPTVLRIWDAFLSEGAKVLFRVGLTLMRLALGTVEQRTACPGLLETLGALRAIPPTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SLPFPTVLRIWDAFLSEGAKVLFRVGLTLMRLALGTVEQRTACPGLLETLGALRAIPPTQ 100 110 120 130 140 150 320 330 340 350 360 370 mFLJ00 LQEEVFMSQVHSVTLSERVLQQEIRIQLAQLSKSLPGPAPLPQARLPGAQAIFESQQLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LQEEVFMSQVHSVTLSERVLQQEIRIQLAQLSKSLPGPAPLPQARLPGAQAIFESQQLAG 160 170 180 190 200 210 380 390 400 410 420 430 mFLJ00 VRESTKPEIPRIVVQPPEEPKPPRRKPQTRGKTFHGLLIRARGPPIEGPSRSQRGSASFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VRESTKPEIPRIVVQPPEEPKPPRRKPQTRGKTFHGLLIRARGPPIEGPSRSQRGSASFL 220 230 240 250 260 270 mFLJ00 DTRF :::: gi|148 DTRF >>gi|81899517|sp|Q8C9V1.1|TB10C_MOUSE RecName: Full=Cara (444 aa) initn: 1551 init1: 1527 opt: 1527 Z-score: 1671.8 bits: 318.5 E(): 2e-84 Smith-Waterman score: 2905; 96.171% identity (96.171% similar) in 444 aa overlap (13-439:1-444) 10 20 30 40 50 60 mFLJ00 QQGACDTGVQGRMAQALGEDLLSELQDDSSSLGSDSELSGPSPYRQADRYGFIGGNSGEL :::::::::::::::::::::::::::::::::::::::::::::::: gi|818 MAQALGEDLLSELQDDSSSLGSDSELSGPSPYRQADRYGFIGGNSGEL 10 20 30 40 70 80 90 100 110 120 mFLJ00 RLCQPSADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIPSALRARCWPLLCGARM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 RLCQPSADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIPSALRARCWPLLCGARM 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 CQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 CQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYTLY 110 120 130 140 150 160 190 200 210 220 mFLJ00 RPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHM-------------- :::::::::::::::::::::::::::::::::::::::::::::: gi|818 RPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHMEAVQLDAEVFMALL 170 180 190 200 210 220 230 240 250 260 270 280 mFLJ00 ---LPRVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPTVLRIWDAFLSEGAKVLFRVGLT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 RRQLPRVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPTVLRIWDAFLSEGAKVLFRVGLT 230 240 250 260 270 280 290 300 310 320 330 340 mFLJ00 LMRLALGTVEQRTACPGLLETLGALRAIPPTQLQEEVFMSQVHSVTLSERVLQQEIRIQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LMRLALGTVEQRTACPGLLETLGALRAIPPTQLQEEVFMSQVHSVTLSERVLQQEIRIQL 290 300 310 320 330 340 350 360 370 380 390 400 mFLJ00 AQLSKSLPGPAPLPQARLPGAQAIFESQQLAGVRESTKPEIPRIVVQPPEEPKPPRRKPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 AQLSKSLPGPAPLPQARLPGAQAIFESQQLAGVRESTKPEIPRIVVQPPEEPKPPRRKPQ 350 360 370 380 390 400 410 420 430 mFLJ00 TRGKTFHGLLIRARGPPIEGPSRSQRGSASFLDTRF :::::::::::::::::::::::::::::::::::: gi|818 TRGKTFHGLLIRARGPPIEGPSRSQRGSASFLDTRF 410 420 430 440 >>gi|149061961|gb|EDM12384.1| similar to DKFZP434P1750 p (446 aa) initn: 1425 init1: 1401 opt: 1447 Z-score: 1584.3 bits: 302.3 E(): 1.5e-79 Smith-Waterman score: 2731; 90.359% identity (93.722% similar) in 446 aa overlap (13-439:1-446) 10 20 30 40 50 mFLJ00 QQGACDTGVQGRMAQALGEDLL--SELQDDSSSLGSDSELSGPSPYRQADRYGFIGGNSG :::::::::: :::::::::::::::.:: ::::::::::::::::. gi|149 MAQALGEDLLLPSELQDDSSSLGSDSEISGSSPYRQADRYGFIGGNSA 10 20 30 40 60 70 80 90 100 110 mFLJ00 ELRLCQPSADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIPSALRARCWPLLCGA :: : :: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ELGLGQPPADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIPSALRARCWPLLCGA 50 60 70 80 90 100 120 130 140 150 160 170 mFLJ00 RMCQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT .::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 HMCQKNNPGTYQELAVAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT 110 120 130 140 150 160 180 190 200 210 220 mFLJ00 LYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHM------------ :::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHMEAVQLDAEVFMA 170 180 190 200 210 220 230 240 250 260 270 280 mFLJ00 -----LPRVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPTVLRIWDAFLSEGAKVLFRVG :::::::::::::::::::::::::::::::::: ::::::::::::::::::.: gi|149 LLRRLLPRVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPIVLRIWDAFLSEGAKVLFRAG 230 240 250 260 270 280 290 300 310 320 330 340 mFLJ00 LTLMRLALGTVEQRTACPGLLETLGALRAIPPTQLQEEVFMSQVHSVTLSERVLQQEIRI ::::::::::::::::::::::::::::.::::::::::::::::.:.:::: ::.:::: gi|149 LTLMRLALGTVEQRTACPGLLETLGALRTIPPTQLQEEVFMSQVHNVALSERDLQREIRI 290 300 310 320 330 340 350 360 370 380 390 400 mFLJ00 QLAQLSKSLPGPAPLPQARLPGAQAIFESQQLAGVRESTKPEIPRIVVQPPEEPKPPRRK ::::: :: :::.:::::::::::::::::::::.: ..:::::::::::::::.::::: gi|149 QLAQLPKSSPGPVPLPQARLPGAQAIFESQQLAGMRGGAKPEIPRIVVQPPEEPNPPRRK 350 360 370 380 390 400 410 420 430 mFLJ00 PQTRGKTFHGLLIRARGPPIEGPSRSQRGSASFLDTRF ::::::::::::::::::::::::::.::::::::::: gi|149 PQTRGKTFHGLLIRARGPPIEGPSRSHRGSASFLDTRF 410 420 430 440 >>gi|26344644|dbj|BAC35971.1| unnamed protein product [M (382 aa) initn: 1422 init1: 1422 opt: 1436 Z-score: 1573.2 bits: 300.0 E(): 6.4e-79 Smith-Waterman score: 2495; 95.550% identity (95.550% similar) in 382 aa overlap (75-439:1-382) 50 60 70 80 90 100 mFLJ00 RQADRYGFIGGNSGELRLCQPSADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIP :::::::::::::::::::::::::::::: gi|263 MKWVEMTLHWEKTMSRRYKKVKIQCRKGIP 10 20 30 110 120 130 140 150 160 mFLJ00 SALRARCWPLLCGARMCQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SALRARCWPLLCGARMCQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQG 40 50 60 70 80 90 170 180 190 200 210 220 mFLJ00 HGQQGLLQVLKAYTLYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 HGQQGLLQVLKAYTLYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGP 100 110 120 130 140 150 230 240 250 260 mFLJ00 HM-----------------LPRVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPTVLRIWD :: ::::::::::::::::::::::::::::::::::::::::: gi|263 HMEAVQLDAEVFMALLRRQLPRVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPTVLRIWD 160 170 180 190 200 210 270 280 290 300 310 320 mFLJ00 AFLSEGAKVLFRVGLTLMRLALGTVEQRTACPGLLETLGALRAIPPTQLQEEVFMSQVHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AFLSEGAKVLFRVGLTLMRLALGTVEQRTACPGLLETLGALRAIPPTQLQEEVFMSQVHS 220 230 240 250 260 270 330 340 350 360 370 380 mFLJ00 VTLSERVLQQEIRIQLAQLSKSLPGPAPLPQARLPGAQAIFESQQLAGVRESTKPEIPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VTLSERVLQQEIRIQLAQLSKSLPGPAPLPQARLPGAQAIFESQQLAGVRESTKPEIPRI 280 290 300 310 320 330 390 400 410 420 430 mFLJ00 VVQPPEEPKPPRRKPQTRGKTFHGLLIRARGPPIEGPSRSQRGSASFLDTRF :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VVQPPEEPKPPRRKPQTRGKTFHGLLIRARGPPIEGPSRSQRGSASFLDTRF 340 350 360 370 380 >>gi|109105208|ref|XP_001106367.1| PREDICTED: similar to (446 aa) initn: 1424 init1: 1358 opt: 1401 Z-score: 1534.0 bits: 293.0 E(): 9.7e-77 Smith-Waterman score: 2596; 84.753% identity (91.704% similar) in 446 aa overlap (13-439:1-446) 10 20 30 40 50 mFLJ00 QQGACDTGVQGRMAQALGEDLLS--ELQDDSSSLGSDSELSGPSPYRQADRYGFIGGNSG :::::::::.. ::::::::::::::::::.:::::::::::::.:. gi|109 MAQALGEDLVQPPELQDDSSSLGSDSELSGPGPYRQADRYGFIGGSSA 10 20 30 40 60 70 80 90 100 110 mFLJ00 ELRLCQPSADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIPSALRARCWPLLCGA : .: ::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|109 EPGPGHPPADLIRQREMKWVEMTLHWEKTMSRRYKKVKMQCRKGIPSALRARCWPLLCGA 50 60 70 80 90 100 120 130 140 150 160 170 mFLJ00 RMCQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT ..::::.:::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|109 HVCQKNSPGTYQELAEAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT 110 120 130 140 150 160 180 190 200 210 220 mFLJ00 LYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHM------------ :::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHMEAVRLDAEVFMA 170 180 190 200 210 220 230 240 250 260 270 280 mFLJ00 -----LPRVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPTVLRIWDAFLSEGAKVLFRVG ::.:.::::::::::::::::::::::.::::::::::.:::::::::::::::: gi|109 LLRRLLPHVHKHLQQVGVGPLLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGAKVLFRVG 230 240 250 260 270 280 290 300 310 320 330 340 mFLJ00 LTLMRLALGTVEQRTACPGLLETLGALRAIPPTQLQEEVFMSQVHSVTLSERVLQQEIRI :::.::::::.::: :::::::::::::::::.:::::.::::::.:.:::: ::.::. gi|109 LTLVRLALGTAEQRGACPGLLETLGALRAIPPAQLQEEAFMSQVHNVVLSERDLQREIKA 290 300 310 320 330 340 350 360 370 380 390 400 mFLJ00 QLAQLSKSLPGPAPLPQARLPGAQAIFESQQLAGVRESTKPEIPRIVVQPPEEPKPPRRK ::::: : ::: : ::.:: :::::::.:::::.:...:::.:::::::::::.::::: gi|109 QLAQLPDSAPGPPPRPQVRLAGAQAIFEAQQLAGARRGAKPEVPRIVVQPPEEPRPPRRK 350 360 370 380 390 400 410 420 430 mFLJ00 PQTRGKTFHGLLIRARGPPIEGPSRSQRGSASFLDTRF :::::::::::: :::::::::: : ::::.::::::: gi|109 PQTRGKTFHGLLTRARGPPIEGPPRPQRGSTSFLDTRF 410 420 430 440 >>gi|74728014|sp|Q8IV04.1|TB10C_HUMAN RecName: Full=Cara (446 aa) initn: 1416 init1: 1350 opt: 1393 Z-score: 1525.3 bits: 291.4 E(): 3e-76 Smith-Waterman score: 2594; 84.753% identity (91.480% similar) in 446 aa overlap (13-439:1-446) 10 20 30 40 50 mFLJ00 QQGACDTGVQGRMAQALGEDLLS--ELQDDSSSLGSDSELSGPSPYRQADRYGFIGGNSG :::::::::.. ::::::::::::::::::.:::::::::::::.:. gi|747 MAQALGEDLVQPPELQDDSSSLGSDSELSGPGPYRQADRYGFIGGSSA 10 20 30 40 60 70 80 90 100 110 mFLJ00 ELRLCQPSADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIPSALRARCWPLLCGA : .: ::::::::::::::: ::::::::::::::.::::::::::::::::::::: gi|747 EPGPGHPPADLIRQREMKWVEMTSHWEKTMSRRYKKVKMQCRKGIPSALRARCWPLLCGA 50 60 70 80 90 100 120 130 140 150 160 170 mFLJ00 RMCQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT ..::::.:::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|747 HVCQKNSPGTYQELAEAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT 110 120 130 140 150 160 180 190 200 210 220 mFLJ00 LYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHM------------ :::::::::::::::::::::::::::::::::::::::::::::::: gi|747 LYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHMEAVRLDAEVFMA 170 180 190 200 210 220 230 240 250 260 270 280 mFLJ00 -----LPRVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPTVLRIWDAFLSEGAKVLFRVG ::.:.::::::::::::::::::::::.::::::::::.:::::::::.:::::: gi|747 LLRRLLPHVHKHLQQVGVGPLLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGARVLFRVG 230 240 250 260 270 280 290 300 310 320 330 340 mFLJ00 LTLMRLALGTVEQRTACPGLLETLGALRAIPPTQLQEEVFMSQVHSVTLSERVLQQEIRI :::.::::::.::: :::::::::::::::::.:::::.::::::::.:::: ::.::. gi|747 LTLVRLALGTAEQRGACPGLLETLGALRAIPPAQLQEEAFMSQVHSVVLSERDLQREIKA 290 300 310 320 330 340 350 360 370 380 390 400 mFLJ00 QLAQLSKSLPGPAPLPQARLPGAQAIFESQQLAGVRESTKPEIPRIVVQPPEEPKPPRRK ::::: : ::: : ::.:: :::::::.:::::::...:::.:::::::::::.::::: gi|747 QLAQLPDSAPGPPPRPQVRLAGAQAIFEAQQLAGVRRGAKPEVPRIVVQPPEEPRPPRRK 350 360 370 380 390 400 410 420 430 mFLJ00 PQTRGKTFHGLLIRARGPPIEGPSRSQRGSASFLDTRF :::::::::::: :::::::::: : ::::.::::::: gi|747 PQTRGKTFHGLLTRARGPPIEGPPRPQRGSTSFLDTRF 410 420 430 440 >>gi|194218529|ref|XP_001917525.1| PREDICTED: TBC1 domai (446 aa) initn: 1417 init1: 1350 opt: 1393 Z-score: 1525.3 bits: 291.4 E(): 3e-76 Smith-Waterman score: 2591; 84.529% identity (91.928% similar) in 446 aa overlap (13-439:1-446) 10 20 30 40 50 mFLJ00 QQGACDTGVQGRMAQALGEDLLS--ELQDDSSSLGSDSELSGPSPYRQADRYGFIGGNSG :::::::::.. ::::::::::::::::::.:::::::::::::.:. gi|194 MAQALGEDLVQPCELQDDSSSLGSDSELSGPGPYRQADRYGFIGGSSA 10 20 30 40 60 70 80 90 100 110 mFLJ00 ELRLCQPSADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIPSALRARCWPLLCGA : .: ::::::::::::::: ::::::::::::::.::::::::::::::::::::: gi|194 EPGPGHPPADLIRQREMKWVEMTSHWEKTMSRRYKKVKMQCRKGIPSALRARCWPLLCGA 50 60 70 80 90 100 120 130 140 150 160 170 mFLJ00 RMCQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT ..::::.:::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|194 HVCQKNSPGTYQELAEAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT 110 120 130 140 150 160 180 190 200 210 220 mFLJ00 LYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHM------------ :::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHMEAVQLDAEVFMA 170 180 190 200 210 220 230 240 250 260 270 280 mFLJ00 -----LPRVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPTVLRIWDAFLSEGAKVLFRVG ::::.::::::::::::::::::::::.::::::::::.::::::::.::::::: gi|194 LLRRLLPRVHKHLQQVGVGPLLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGVKVLFRVG 230 240 250 260 270 280 290 300 310 320 330 340 mFLJ00 LTLMRLALGTVEQRTACPGLLETLGALRAIPPTQLQEEVFMSQVHSVTLSERVLQQEIRI :::.::::::.::: :::::::::::::.:::.:::::.::::::::.:::. ::..:: gi|194 LTLVRLALGTAEQRLACPGLLETLGALRTIPPAQLQEEAFMSQVHSVALSEHDLQRQIRA 290 300 310 320 330 340 350 360 370 380 390 400 mFLJ00 QLAQLSKSLPGPAPLPQARLPGAQAIFESQQLAGVRESTKPEIPRIVVQPPEEPKPPRRK ::::: .: :: : :::::::::::::.:::::.: .:.::.:::::::::::.::::: gi|194 QLAQLPESASGPPPRPQARLPGAQAIFEAQQLAGARGGTRPEVPRIVVQPPEEPRPPRRK 350 360 370 380 390 400 410 420 430 mFLJ00 PQTRGKTFHGLLIRARGPPIEGPSRSQRGSASFLDTRF :::::::::::: :.:::::::::::.:::.::::::: gi|194 PQTRGKTFHGLLTRSRGPPIEGPSRSHRGSTSFLDTRF 410 420 430 440 >>gi|151555954|gb|AAI49745.1| TBC1D10C protein [Bos taur (353 aa) initn: 1411 init1: 1340 opt: 1380 Z-score: 1512.5 bits: 288.7 E(): 1.5e-75 Smith-Waterman score: 1660; 77.160% identity (84.877% similar) in 324 aa overlap (13-317:1-315) 10 20 30 40 50 mFLJ00 QQGACDTGVQGRMAQALGEDLLS--ELQDDSSSLGSDSELSGPSPYRQADRYGFIGGNSG ::::::::: . ::::::::::::::::::.:::::::::::::... gi|151 MAQALGEDLAQPGELQDDSSSLGSDSELSGPGPYRQADRYGFIGGSAA 10 20 30 40 60 70 80 90 100 110 mFLJ00 ELRLCQPSADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIPSALRARCWPLLCGA : .: ::::::::::::::: ::::::::::::::.::::::::::::::::::::: gi|151 EPGPGHPPADLIRQREMKWVEMTSHWEKTMSRRYKKVKMQCRKGIPSALRARCWPLLCGA 50 60 70 80 90 100 120 130 140 150 160 170 mFLJ00 RMCQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT ..::::.:::::.:: :::::::::::::::::::::::::::::::::::::::::::: gi|151 HVCQKNSPGTYQNLAEAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT 110 120 130 140 150 160 180 190 200 210 220 mFLJ00 LYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHM------------ :::::::::::::::::::::::::::::::::::::::::::::::: gi|151 LYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHMEAVRLDAEVFMA 170 180 190 200 210 220 230 240 250 260 270 280 mFLJ00 -----LPRVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPTVLRIWDAFLSEGAKVLFRVG ::::.::::.:::::::::::::::::.::::::::::.:::::::. : .: gi|151 LLRRLLPRVHKHLQKVGVGPLLYLPEWFLCLFARSLPFPTVLRVWDAFLSEA---LHWTG 230 240 250 260 270 280 290 300 310 320 330 340 mFLJ00 LTLMRLALGTVEQRTACPGLLETLGALRAIPPTQLQEEVFMSQVHSVTLSERVLQQEIRI : : . :. :: : .::. .: ::... gi|151 ----RGAEAQNEK--ACVRLSAALGSWQAALPTSVRGCWDLLAGAPKWPTCSQSRQQSCR 290 300 310 320 330 350 360 370 380 390 400 mFLJ00 QLAQLSKSLPGPAPLPQARLPGAQAIFESQQLAGVRESTKPEIPRIVVQPPEEPKPPRRK gi|151 RVEGVWPRTGSGPG 340 350 >>gi|73982837|ref|XP_864754.1| PREDICTED: similar to TBC (438 aa) initn: 1391 init1: 1337 opt: 1380 Z-score: 1511.2 bits: 288.8 E(): 1.8e-75 Smith-Waterman score: 2594; 85.616% identity (93.379% similar) in 438 aa overlap (13-439:1-438) 10 20 30 40 50 mFLJ00 QQGACDTGVQGRMAQALGEDLLS--ELQDDSSSLGSDSELSGPSPYRQADRYGFIGGNSG :::::::::.. ::::::::::::::::::.:::::::::::::.:. gi|739 MAQALGEDLVQPFELQDDSSSLGSDSELSGPGPYRQADRYGFIGGSSA 10 20 30 40 60 70 80 90 100 110 mFLJ00 ELRLCQPSADLIRQREMKWVEMTLHWEKTMSRRYKKVKIQCRKGIPSALRARCWPLLCGA : .: ::::::::::::::: ::::::::::::::.::::::::::::::::::::: gi|739 EPGPGHPPADLIRQREMKWVEMTSHWEKTMSRRYKKVKMQCRKGIPSALRARCWPLLCGA 50 60 70 80 90 100 120 130 140 150 160 170 mFLJ00 RMCQKNNPGTYQELAAAPGDPQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT ..::::.:::::::: :::::::::::.:::::::::::::::::::::::::::::::: gi|739 HVCQKNSPGTYQELAEAPGDPQWMETISRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYT 110 120 130 140 150 160 180 190 200 210 220 mFLJ00 LYRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHM---------LPR :.:::::::::::::::::::::::::::::::::::::::::::::: ::: gi|739 LHRPEQGYCQAQGPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPHMVFMALLRRLLPR 170 180 190 200 210 220 230 240 250 260 270 280 mFLJ00 VYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPTVLRIWDAFLSEGAKVLFRVGLTLMRLAL :.::::::::::::::::::::::.:::::: :::.::::::::.::::::::::.:::: gi|739 VHKHLQQVGVGPLLYLPEWFLCLFARSLPFPIVLRVWDAFLSEGVKVLFRVGLTLVRLAL 230 240 250 260 270 280 290 300 310 320 330 340 mFLJ00 GTVEQRTACPGLLETLGALRAIPPTQLQEEVFMSQVHSVTLSERVLQQEIRIQLAQLSKS ::.::: :::::::::::::::::::::::::::::::..:::. ::.:::.:::.: .: gi|739 GTTEQRLACPGLLETLGALRAIPPTQLQEEVFMSQVHSMALSEQDLQREIRVQLARLPES 290 300 310 320 330 340 350 360 370 380 390 400 mFLJ00 LPGPAPLPQARLPGAQAIFESQQLAGVRESTKPEIPRIVVQPPEEPKPPRRKPQTRGKTF :: : :::::::::::::.:::::.. :.:::.:::::::::::.::::::::::::: gi|739 TSGPPPRPQARLPGAQAIFEAQQLAGAQGSAKPEVPRIVVQPPEEPRPPRRKPQTRGKTF 350 360 370 380 390 400 410 420 430 mFLJ00 HGLLIRARGPPIEGPSRSQRGSASFLDTRF :::: :.:::::::: ::.:::.::::::: gi|739 HGLLTRSRGPPIEGPPRSHRGSTSFLDTRF 410 420 430 439 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 06:17:54 2009 done: Fri Mar 13 06:24:35 2009 Total Scan time: 907.120 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]