Comparison of KIAA cDNA sequences between mouse and human (FLJ00332)
<<Original sequence data>>
mouse mFLJ00332 (msk03045) length: 1658 bp, CDS: 1 - 1320
human (sj03652) length: 4480 bp, CDS: 1477 - 2082
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 29 - 1673 435 121 21.8
CDS: 1674 - 2213 122 17 12.2
3'UTR: 2214 - 4615 599 224 27.2
amino acid
CDS: 1674 - 2213 42 138 76.7
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msk03045 1 CAGCAAGGAGCCTGTGACACTGGGGTCCAGGGCAGAATGGCCCAGGCCCT 50
|||| |||| || |
sj03652 1 ............................TTGGCAAAATGTACCCACC... 19
51 ----+----*----+----*----+----*----+----*----+----* 100
msk03045 51 GGGAGAGGACTTGTTATCAGAACTACAGGATGATTCTAGCTCCCTAGGGT 100
|| | ||| || | || | || || ||
sj03652 20 .........CTGTGTCCCAGCACCTCCGGCCTTTGCTCCCTGCC...... 54
101 ----+----*----+----*----+----*----+----*----+----* 150
msk03045 101 CTGACTCAGAGCTGAGTGGGCCCAGTCCATATCGCCAGGCTGACCGTTAT 150
| ||||||||| ||
sj03652 55 ........ACCCAAAGTGGGCCCCTGCC...................... 74
151 ----+----*----+----*----+----*----+----*----+----* 200
msk03045 151 GGCTTCATTGGGGGCAACTCAGGTGAACTGAGGCTTTGTCAACCCTCTGC 200
| | ||| ||| | || | |
sj03652 75 .................TGCTGATGAGCTGTGCCTGGGGC.......... 97
201 ----+----*----+----*----+----*----+----*----+----* 250
msk03045 201 AGACCTCATCCGCCAGCGAGAGATGAAATGGGTGGAAATGACCTTACACT 250
| |||||| ||| | || || |
sj03652 98 .........CTGCCAGCAGGAGCTATGGAGGCTG..............CC 124
251 ----+----*----+----*----+----*----+----*----+----* 300
msk03045 251 GGGAGAAGACCATGTCCCGACGATACAAGAAGGTAAAGATCCAGTGCCGC 300
| | || || || || || |||||||||| ||||||||
sj03652 125 TAGTGGAGCCCTTGGCC.....TCACCCACAGGTAAAGATGCAGTGCCGG 169
301 ----+----*----+----*----+----*----+----*----+----* 350
msk03045 301 AAGGGCATCCCCTCAGCCCTGCGTGCCCGGTGTTGGCCCCTCCTGTGTGG 350
|| |||||||| || |||||||| ||||| || |||||||| |||||||
sj03652 170 AAAGGCATCCCGTCTGCCCTGCGCGCCCGATGCTGGCCCCTGTTGTGTGG 219
351 ----+----*----+----*----+----*----+----*----+----* 400
msk03045 351 GGCCCGGATGTGTCAGAAGAACAACCCTGGCACCTACCAGGAGCTGGCAG 400
||||| |||| |||||||||| |||||||||||| |||||||||||||
sj03652 220 GGCCCATGTGTGCCAGAAGAACAGCCCTGGCACCTATCAGGAGCTGGCAG 269
401 ----+----*----+----*----+----*----+----*----+----* 450
msk03045 401 CAGCCCCCGGGGACCCGCAGTGGATGGAGACCATTGGCAGAGACTTGCAC 450
||||| || ||||| ||||||||||||||||||||||| ||| |||||
sj03652 270 AGGCCCCTGGAGACCCACAGTGGATGGAGACCATTGGCAGGGACCTGCAC 319
451 ----+----*----+----*----+----*----+----*----+----* 500
msk03045 451 CGTCAGTTTCCTCTGCATGAGATGTTTGTGTCACCCCAGGGACACG.... 496
||||| || |||||||| |||||||||||||| || ||||| ||||
sj03652 320 CGTCAATTCCCTCTGCACGAGATGTTTGTGTCGCCTCAGGGCCACGGGTA 369
501 ----+----*----+----*----+----*----+----*----+----* 550
msk03045 497 .................................................. 497
sj03652 370 CGAGGCCGGTGATGCCCAGGGACCCCCAGCCCCACAAGCCCCAGGTGCTC 419
551 ----+----*----+----*----+----*----+----*----+----* 600
msk03045 497 .................................................. 497
sj03652 420 CAGCCCACTTTCCCTAGCCCAGCTCTACAGTCTTGCATCTCAGGGGACCC 469
601 ----+----*----+----*----+----*----+----*----+----* 650
msk03045 497 .................................................. 497
sj03652 470 AGGAAGGCCCAGGGAGGCTGAGGCCTGGGCAGAGGCCCCCAGAGGGTGGA 519
651 ----+----*----+----*----+----*----+----*----+----* 700
msk03045 497 ...............................................GGC 499
|||
sj03652 520 GAAGGGGGTGCCTGCAGGACTGGCCCCTTATGGGGTCTTCCGGCACAGGC 569
701 ----+----*----+----*----+----*----+----*----+----* 750
msk03045 500 AGCAGGGGCTGCTGCAGGTTCTCAAGGCCTACACCCTGTACCGGCCAGAG 549
|||||||||| |||||||| |||||||||||||||||||| || || |||
sj03652 570 AGCAGGGGCTCCTGCAGGTGCTCAAGGCCTACACCCTGTATCGACCGGAG 619
751 ----+----*----+----*----+----*----+----*----+----* 800
msk03045 550 CAGGGATACTGCCAGGCTCAGGGACCTGTAGCTGCTGTGCTGCTCATGCA 599
||||| ||||||||||| ||||| || || ||||||||||||||||||||
sj03652 620 CAGGGCTACTGCCAGGCCCAGGGGCCCGTGGCTGCTGTGCTGCTCATGCA 669
801 ----+----*----+----*----+----*----+----*----+----* 850
msk03045 600 TCTACCCCCAG....................................... 610
|| |||||||
sj03652 670 CCTGCCCCCAGAGGTGAGTGACCTTGACCCTGCTCTGGGAACCCTAGTGA 719
851 ----+----*----+----*----+----*----+----*----+----* 900
msk03045 611 .................................................. 611
sj03652 720 CCTAGGCCCAGGGAACCCCATCCCCAGGAACTGTGGCCTCAGAAACCTGC 769
901 ----+----*----+----*----+----*----+----*----+----* 950
msk03045 611 .................................................. 611
sj03652 770 AATCCTTGATTCCTGGACCCTGTCCTAGTGACCCAGGTCCTCATGACTGC 819
951 ----+----*----+----*----+----*----+----*----+----* 1000
msk03045 611 .................................................. 611
sj03652 820 CAGCCTCAGTGACCTTCAAGCCTAATGACCTTGACTCCAGGAACCTGGGA 869
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msk03045 611 .................................................. 611
sj03652 870 CCCTTGACCCCAGCCTTGACCCCAGTCATCTAGGAATCTGGATGTTATCA 919
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msk03045 611 .................................................. 611
sj03652 920 CCTTGACCCCACGACTCCTGATTCTGAACTTGGGGACTGCGACCCCAACC 969
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msk03045 611 .................................................. 611
sj03652 970 CCAAAGACCCAGAAACCCAGGACTTGAACTTTGGGACACTCCCAACCCTT 1019
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msk03045 611 .................................................. 611
sj03652 1020 GGCCAGTGAACCCCAACCCTGTGACCTTCAAATCTAACACCATGAGCCCT 1069
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msk03045 611 .................................................. 611
sj03652 1070 GTGATTTCCAACACCCTAAACCCCTCAGCAGACCCTGTCTTGGGCAGAGG 1119
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msk03045 611 .................................................. 611
sj03652 1120 AGGGGGCTTTTGGGAAGGGCTTCCAGGAACTGCGCAGGTTAGGAGTGGCC 1169
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msk03045 611 .................................................. 611
sj03652 1170 CTGAGTGCAGGCCCCTGTGGTGCCCAGGCCCTCCCCTTCACTCCTTTCCC 1219
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msk03045 611 .................................................. 611
sj03652 1220 CTGTCCTGCCTTCTCCTCCACGGTCCCTTCCTTGGTGAGCACTTACAGGC 1269
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msk03045 611 ....................AGGAGGCCTTCTGGTGCTTGGTGCAGATCT 640
||||||||||||||||| ||||||||||||
sj03652 1270 CTGTGCCCTGCCCCTTCCCCAGGAGGCCTTCTGGTGCCTGGTGCAGATCT 1319
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msk03045 641 GCGAGGTCTACCTCCCTGGCTACTATGGGCCCCACA.............. 676
| ||||||||||||||||| ||||| ||||||||||
sj03652 1320 GTGAGGTCTACCTCCCTGGGTACTACGGGCCCCACATGGTGAGAGGCTGA 1369
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msk03045 677 .................................................. 677
sj03652 1370 CATGGGGGCTGGAGGAAGGAGGGGCAGGGGCCCGGTGAGTGGGTGGGGGT 1419
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msk03045 677 .................................................. 677
sj03652 1420 CTGGGGACTGAGGGAGGTTGAGCCTGGGCTCTGGGGGTGGCGGTGCTGGC 1469
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msk03045 677 .................................................. 677
sj03652 1470 CTGCTGATGGACGTGGCCACAGGAGGCTGTGCGGCTGGACGCCGAGGTGT 1519
W T W P Q E A V R L D A E V F
1651 ----+----*----+----*----+----*----+----*----+----* 1700
L P R V Y K H L Q
msk03045 677 .....................TGCTCCCACGAGTGTACAAGCACCTGCAG 705
|||| || | ||| ||||||||||||||
sj03652 1520 TCATGGCCCTGCTGCGGCGGCTGCTTCCGCACGTGCACAAGCACCTGCAG 1569
M A L L R R L L P H V H K H L Q
1701 ----+----*----+----*----+----*----+----*----+----* 1750
Q V G V G P L L Y L P E W F L C L
msk03045 706 CAGGTAGGCGTCGGCCCCCTGCTCTACCTGCCTGAGTGGTTCCTGTGCCT 755
||||| |||||||| |||||||| |||||||| |||||||||||||||||
sj03652 1570 CAGGTGGGCGTCGGACCCCTGCTGTACCTGCCCGAGTGGTTCCTGTGCCT 1619
Q V G V G P L L Y L P E W F L C L
1751 ----+----*----+----*----+----*----+----*----+----* 1800
F T R S L P F P T V L R I W D A F
msk03045 756 CTTCACTCGGTCGCTGCCCTTCCCCACAGTACTGCGCATCTGGGATGCCT 805
|||| | || || ||||||||||||||||| ||||| ||||||||||||
sj03652 1620 CTTCGCCCGCTCCCTGCCCTTCCCCACAGTGCTGCGTGTCTGGGATGCCT 1669
F A R S L P F P T V L R V W D A F
1801 ----+----*----+----*----+----*----+----*----+----* 1850
L S E
msk03045 806 TCCTCAGTGAG....................................... 816
|||||||||||
sj03652 1670 TCCTCAGTGAGGGTGAGTGGGGCAGCCAGTGGCTGGGGCAGGAGCCTTGG 1719
L S E G E W G S Q W L G Q E P W
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msk03045 817 .................................................. 817
sj03652 1720 GGTGTGGGTGGGGAGGTAGCTCACCAGCTCCAGGGTTCCCTTTTTGAGCC 1769
G V G G E V A H Q L Q G S L F E P
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msk03045 817 .................................................. 817
sj03652 1770 TCAAATCACAGGACTGGGTGTGCCGAAGGTGATGGCCTGGTGCCTGGCGC 1819
Q I T G L G V P K V M A W C L A L
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msk03045 817 .................................................. 817
sj03652 1820 TACATCACCCATCACCCATCACCCAGGCACCGCCTGGTGCAGAGCTGGGC 1869
H H P S P I T Q A P P G A E L G
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msk03045 817 .................................................. 817
sj03652 1870 CAGGGAGGCTTCCAGAGGAGGCAGATGGGGCAGGAGCAGGGTGATCACAG 1919
Q G G F Q R R Q M G Q E Q G D H S
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msk03045 817 .................................................. 817
sj03652 1920 CACATGGAGGCCTGAGCTTCTCAGGGACAGTAGGAGGCGTTCCTCCCCAG 1969
T W R P E L L R D S R R R S S P E
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msk03045 817 .................................................. 817
sj03652 1970 AGCCCGCAGGCACCTGCTGGGTGCTCACTGGCTCCAGACGTGGATCTGCA 2019
P A G T C W V L T G S R R G S A
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msk03045 817 .................................................. 817
sj03652 2020 GCTGGGAATCAAGTGATCGAGACCTTCAATTCTGGCGGGGGTGGGGATGG 2069
A G N Q V I E T F N S G G G G D G
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msk03045 817 .................................................. 817
sj03652 2070 GTGGCGACAGTAACCAAATTCACAAGATATTTATAGATTGTCAGAAGTGT 2119
W R Q *
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msk03045 817 .................................................. 817
sj03652 2120 CATGAAGAAAATAAAACAAGGGATGTGACAGGGAGTGTCAGGGGAGTGCA 2169
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msk03045 817 .................................................. 817
sj03652 2170 GGGGCGATGGCTGCATTTAAGCTCCTTCTGGCTGCTCTGTGCAGGAGGAG 2219
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msk03045 817 .................................................. 817
sj03652 2220 GACTCACAGGGGTGGCTGTGGAGGCCTGGGGCCAGAGAGGCCACTGTCCC 2269
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msk03045 817 .................................................. 817
sj03652 2270 CAGGGGCCAGGCTACAGTCTACGAAGCAGGGAGGGCTTGGAGCCATGAAG 2319
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msk03045 817 .................................................. 817
sj03652 2320 CCAGAGAGGTGGAGGCTGGGGGCCAGGCCAAGAACAGGAGGGGAGTCGGA 2369
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msk03045 817 .................................................. 817
sj03652 2370 GCAGAGCCAAGCTGGACTCCCTGTGTCTTTGGGACTCTGCCTTGATACTG 2419
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msk03045 817 .................................................. 817
sj03652 2420 CCATCGGTAACCCACCTGCATTCTGTTCTATATGTGAGGTCTGGAGGTTG 2469
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msk03045 817 .................................................. 817
sj03652 2470 CACCTTAAAACGTGGTAGAAATCAGTCAGCATATGCATACTGTGCATACT 2519
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msk03045 817 .................................................. 817
sj03652 2520 GAATGCCTGTCGTGTGCTCAGCCGGCTTCCTGCCCTCCGCACAGCGGAGG 2569
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msk03045 817 .................................................. 817
sj03652 2570 ACCACTGGCTGACTTAGAGTTCTGGCCACAGGTGTCCAAGTCGCTATCCA 2619
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msk03045 817 .................................................. 817
sj03652 2620 TGCGGTCACCTTCCAACCAGCCTTAGACCTCGAGAGCAGGGCTGGGCAGA 2669
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msk03045 817 .................................................. 817
sj03652 2670 GCTGGGCAGGGCCTGACCTGCCCACCTGGGGGCAAACACTACACAGGCTC 2719
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msk03045 817 .................................................. 817
sj03652 2720 CCTTTATCAGAAGGACGATAGTATGAATAGTGATTGTTCCTACCATCATC 2769
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msk03045 817 .................................................. 817
sj03652 2770 ACTCAACCTCGCTGGTCCCCTGGTGGCTCTTCTCAGATCAGAGGCTGCCA 2819
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msk03045 817 .................................................. 817
sj03652 2820 GGAAGGAATTTTGAGGCTCCAGGACTAGCCCAAACTCACACTGTGGGGAG 2869
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msk03045 817 .................................................. 817
sj03652 2870 TGTGCACTGAGTGCTATGCTCCTGGCTTAGGGAAGAGCAGTTCTGCCTAG 2919
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msk03045 817 .................................................. 817
sj03652 2920 GATCTTTCTAGAATCAGAGGGTCACAGATCCAAGTTGGAAAGGCCCTTAA 2969
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msk03045 817 .................................................. 817
sj03652 2970 AGGGCTCCACCTGACCTTTCATCATGGAGATGAGCAAGCTGAGGCCCAGG 3019
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msk03045 817 .................................................. 817
sj03652 3020 GAGGGCTTGGTGTGAAGGCATCAGTAGCCCTGGGCTCCTGGCAGGAAGCT 3069
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msk03045 817 .................................................. 817
sj03652 3070 GGTGGCTTGGAGGGGACTGGAGCCTTGGGGTGTGGACAGGGAGCTAGCTC 3119
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msk03045 817 .................................................. 817
sj03652 3120 ACCAGCTCCAGGGTTCCCTTTTGGAGCCTCGAGTCATGGGACCAGGTGTG 3169
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msk03045 817 .................................................. 817
sj03652 3170 CTGAAGGTGATGGCCCTGTGCCTGGTGGCACATCACCTGTCACCCGGATG 3219
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msk03045 817 .................................................. 817
sj03652 3220 CTGCCTGGGGTAGGAGCTGGGTGATCATAGCACATGGAGGCCTGACTGGC 3269
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msk03045 817 .................................................. 817
sj03652 3270 TCAGGGAGGGTAGGAGGTGCTCCTCCCCGGAGCCCACAGGCACCTGCTGG 3319
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msk03045 817 .................................................. 817
sj03652 3320 GTGCTTGCTGGCTCCAGATATGGATGGCATCTGAGCATCAAGTGATCAAG 3369
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msk03045 817 .................................................. 817
sj03652 3370 ACCTTCATTTTGGCGGGGGTGGGGATGGGAGGCGACAGTAACCAAATTCA 3419
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msk03045 817 .................................................. 817
sj03652 3420 CAAGATAGTAACTCTTCCCCAAAGCATCTGTGGCTCTTGAGGCTAACTTG 3469
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msk03045 817 .................................................. 817
sj03652 3470 GCCAGTACAGCGGCCTGTGTTACCCGAAATGCAACTCCACCCTCTGTCAT 3519
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msk03045 817 .................................................. 817
sj03652 3520 TGTTCCTGAACCGGGGAGGGCAGAGCTGCAGGAGAGTGGGAGGCATATGG 3569
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msk03045 817 .................................................. 817
sj03652 3570 CTGAGGGCAGGTTTGGGTGCAGAACTGTGGAGGGGCAGGGCCGGCCTCCC 3619
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msk03045 817 .......................GGGGCTAAGGTACTGTTCCGCGTGGGG 843
|| || | ||||||||||| ||||||
sj03652 3620 AGTGAATAAGCCCCCGGCCTGCAGGTGCCAGAGTACTGTTCCGTGTGGGG 3669
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msk03045 844 CTGACACTGATGCGCCTGGCACTGGGCACTGTAGAACAGCGCACAGCATG 893
||||||||| |||||||||| |||||||||| ||| ||||| || ||
sj03652 3670 CTGACACTGGTGCGCCTGGCGCTGGGCACTGCAGAGCAGCGAGGGGCCTG 3719
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msk03045 894 CCCAGGGCTCCTGGAGACATTGGGGGCCCTACGAGCCATTCCCCCTACCC 943
||| || |||||||||||| |||| ||||| |||||||| ||||| | |
sj03652 3720 CCCTGGCCTCCTGGAGACACTGGGAGCCCTTCGAGCCATCCCCCCCGCGC 3769
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msk03045 944 AGCTGCAGGAAGAGGTCTTCATGTCCCAGGTGCACAGTGTAACCCTGTCT 993
|||||||||| |||| ||||||||| ||||||||||| || |||||
sj03652 3770 AGCTGCAGGAGGAGGCCTTCATGTCACAGGTGCACAGCGTGGTGCTGTCA 3819
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msk03045 994 GAGCGAGTCCTGCAACAGGAAATCAGGATCCAGCTAGCCCAGCTTTCGAA 1043
||||| | |||||| | ||| |||| | |||||| |||||||| | |
sj03652 3820 GAGCGGGACCTGCAGCGGGAGATCAAGGCCCAGCTGGCCCAGCTGCCCGA 3869
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msk03045 1044 GTCACTCCCTGGGCCAGCCCCTCTGCCACAGGCCCGCCTTCCTGGGGCCC 1093
|| || || || | || | |||||||| |||||| | |||||||
sj03652 3870 TTCCGCGCCGGGACCCCCGCCCCGGCCACAGGTCCGCCTCGCCGGGGCCC 3919
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msk03045 1094 AAGCCATCTTCGAGTCCCAGCAGCTGGCAGGGGTTCGAGAAAGCACCAAA 1143
|||||||||| ||| |||||||||||||||| || ||| | || ||||
sj03652 3920 AAGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGTGCGACGAGGCGCCAAG 3969
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msk03045 1144 CCTGAGATACCTCGAATTGTGGTGCAGCCTCCAGAGGAGCCCAAGCCACC 1193
|||||| | ||||| |||||||||||||| || |||||||||| |||||
sj03652 3970 CCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCACC 4019
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msk03045 1194 ACGGCGCAAGCCACAGACCCGGGGTAAGACTTTCCATGGACTCCTGATAA 1243
||||| || || |||||||| || |||||||||||||| |||||||
sj03652 4020 GCGGCGGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGCTCCTGACTC 4069
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msk03045 1244 GGGCCAGGGGACCCCCTATTGAGGGCCCCTCCAGGTCCCAACGAGGCTCT 1293
||||| |||| ||||| || ||||| ||| ||||| |||||||||||||
sj03652 4070 GGGCCCGGGGCCCCCCCATCGAGGGGCCCCCCAGGCCCCAACGAGGCTCC 4119
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msk03045 1294 GCCTCTTTCCTGGACACCCGATTCTAAGTGCACCATACACTTAGTGCCAC 1343
|||| |||||||||||||| |||| || | ||||| |||||||| | |
sj03652 4120 ACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCC 4169
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msk03045 1344 CATATCTCAATCATCTGAGCAGTGATGCCAGCCC......CAGGCATGTA 1387
| ||||||| |||| |||||||||||| |||||
sj03652 4170 CCAGTCTCAATTGCCTGATGGCTGATGCCAGCCCGGCAAATAGGCACCGC 4219
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msk03045 1388 TCCTCTATTGCTGTGCTATGTGACAATGCT..GTTTCCAGCAAGGACCA. 1434
| | | | || | ||| ||| || | ||||||||||
sj03652 4220 ACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAG 4269
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msk03045 1435 .CCGTGAGGAGTGGAGTGTCTCCTCACTTTAAGGACTGTATCAGGCACAA 1483
| ||| ||| | | | | | || |||| |||||||| |
sj03652 4270 GCAGTGGGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTA 4319
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msk03045 1484 AGATAAAGAAGGAT.GCTGAGTGGAGCTTGTGGGGAGCTGT......... 1523
|| || ||| | | |||||| || ||| ||| | |
sj03652 4320 GCATGGAGGAGGGTCACAGAGTGGGGCACGTGAGGACCCATGGAACCGTC 4369
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msk03045 1524 TTGGTG..CTTGCCATTGCCAGCATCAAAGCCAGCACTGAAGGATTGTGG 1571
||||| | ||| | | || | |||||||||||| ||||| | ||
sj03652 4370 CTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGG 4419
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msk03045 1572 GAATAAAGCCTCTGGCTGAGATATGGTACCCCATGGGCTTCTTGCAAGGG 1621
| ||| |||||||| | || |||||| || | | ||
sj03652 4420 G....AAGGGGTTGGCTGAGTCAAGGGACCCCAGAGGGCACCAGGAATAA 4465
4601 ----+----*----+----*----+----*----+-- 4637
msk03045 1622 AATCCTCAAATAAAGCCTGACTGAGAAGATACTAGAT 1658
|||| || | ||
sj03652 4466 AATCTTCTTGAACAG...................... 4480