Comparison of KIAA cDNA sequences between mouse and human (KIAA1996)
<<Original sequence data>>
mouse mKIAA1996 (msj10320) length: 3006 bp, CDS: 3 - 1013
human KIAA1996 (bj00079) length: 3682 bp, CDS: 159 - 1472
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 412 - 413 2 0 0.0
CDS: 414 - 1478 828 183 18.1
3'UTR: 1479 - 3742 1399 587 29.6
amino acid
CDS: 414 - 1478 260 93 26.3
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msj10320 1 .................................................. 1
bj00079 1 ACCGGACAGGCCTTGTCCGGCAATACCAAGTTTCATGCAGGCTCTTGGGA 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msj10320 1 .................................................. 1
bj00079 51 AAGCTGGTGCTGCTGCTGCCTGATTCCCGCCGACAGACCTTGGGACCGGG 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msj10320 1 .................................................. 1
bj00079 101 GCCAACACTGGCAGCTGGAGATGGCGGACACGAGATCCGTGCACGAGACT 150
151 ----+----*----+----*----+----*----+----*----+----* 200
msj10320 1 .................................................. 1
bj00079 151 AGGTTTGAGGCGGCCGTGAAGGTGATCCAGAGTTTGCCGAAGAATGGGAT 200
G G R E G D P E F A E E W D
201 ----+----*----+----*----+----*----+----*----+----* 250
msj10320 1 .................................................. 1
bj00079 201 GCTTGGAGTTCACTGGGTGATATGACCAAAGAGGAAGCCATGATTGCATA 250
A W S S L G D M T K E E A M I A Y
251 ----+----*----+----*----+----*----+----*----+----* 300
msj10320 1 .................................................. 1
bj00079 251 TGTTGAAGAAATGAAAAAGATTATTGAAACTATGCCAATGACTGAGAAAG 300
V E E M K K I I E T M P M T E K V
301 ----+----*----+----*----+----*----+----*----+----* 350
msj10320 1 .................................................. 1
bj00079 301 TTGAAGAATTGCTGCGTGTCATAGGTCCATTTTATGAAATTGTCGAGGAC 350
E E L L R V I G P F Y E I V E D
351 ----+----*----+----*----+----*----+----*----+----* 400
msj10320 1 .................................................. 1
bj00079 351 AAAAAGAGTGGCAGGAGTTCTGATATAACCTCAGATCTTGGTAATGTTCT 400
K K S G R S S D I T S D L G N V L
401 ----+----*----+----*----+----*----+----*----+----* 450
N A K A V N G K A E S S D
msj10320 1 ...........CAAATGCCAAAGCTGTTAATGGTAAAGCAGAGAGCAGTG 39
|||| |||||| | |||||||||||||| || |||||||
bj00079 401 CACTTCTACTCCAAACGCCAAAACCGTTAATGGTAAAGCTGAAAGCAGTG 450
T S T P N A K T V N G K A E S S D
451 ----+----*----+----*----+----*----+----*----+----* 500
S G A E S E E E E A Q E E L K G
msj10320 40 ATAGTGGGGCTGAGTCTGAAGAAGAAGAGGCCCAAGAAGAGTTAAAAGGA 89
| ||||| || |||||||| |||||||||||||||||||| | ||||||
bj00079 451 ACAGTGGAGCCGAGTCTGAGGAAGAAGAGGCCCAAGAAGAAGTGAAAGGA 500
S G A E S E E E E A Q E E V K G
501 ----+----*----+----*----+----*----+----*----+----* 550
A E Q S G D D K K T L K K S A -
msj10320 90 GCAGAACAGAGCGGCAGTGATGATAAGAAAACGCTGAAGAAATCAGCAG. 138
|||||||| || | | |||||||||||| | ||||||| |||||||
bj00079 501 GCAGAACAAAGTG...ATAATGATAAGAAAATGATGAAGAAGTCAGCAGA 547
A E Q S D N D K K M M K K S A D
551 ----+----*----+----*----+----*----+----*----+----* 600
K N L E I I V T N G - K G S F
msj10320 139 ..ATAAGAATTTGGAAATCATTGTTACCAATGGCT...ATAAAGGTAGCT 183
|||||||||||||| ||||||| || ||||||| |||||| | |||
bj00079 548 CCATAAGAATTTGGAAGTCATTGTCACTAATGGCTATGATAAAGATGGCT 597
H K N L E V I V T N G Y D K D G F
601 ----+----*----+----*----+----*----+----*----+----* 650
V Q D I Q S D I H T D S S R S T
msj10320 184 TTGTTCAGGATATACAGAGTGACATTCATACTGATTCTTCCCGGAGCACC 233
|||||||||||||||||| |||||||||| | |||||||| || |
bj00079 598 TTGTTCAGGATATACAGAATGACATTCATGCCAGTTCTTCCCTGAATGGC 647
V Q D I Q N D I H A S S S L N G
651 ----+----*----+----*----+----*----+----*----+----* 700
R S S E D E K P G D E S S Q Q T G
msj10320 234 AGAAGCAGTGAAGATGAAAAGCCTGGAGATGAGAGCTCTCAGCAGACAGG 283
||||||| |||||| | ||||||| ||||| | || ||| || ||
bj00079 648 AGAAGCACTGAAGAAGTAAAGCCTATTGATGAAAACTTGGGGCAAACTGG 697
R S T E E V K P I D E N L G Q T G
701 ----+----*----+----*----+----*----+----*----+----* 750
H T I V C A H Q D R N E D P S E D
msj10320 284 ACACACCATTGTCTGTGCTCACCAAGATAGAAATGAAGATCCCAGTGAAG 333
| | | ||| || ||||||||||| |||||| |||| |||||
bj00079 698 AAAATCTGCTGTTTGCATTCACCAAGATATAAATGATGATCATGTTGAAG 747
K S A V C I H Q D I N D D H V E D
751 ----+----*----+----*----+----*----+----*----+----* 800
A S G I H H L T S D S D S E V Y
msj10320 334 ATGCTTCAGGAATACACCATTTAACAAGTGATTCAGATAGTGAAGTGTAC 383
||| | ||||||| || ||||| ||||| |||||||| |||||||| |||
bj00079 748 ATGTTACAGGAATTCAGCATTTGACAAGCGATTCAGACAGTGAAGTTTAC 797
V T G I Q H L T S D S D S E V Y
801 ----+----*----+----*----+----*----+----*----+----* 850
C D S M E Q F G Q E -
msj10320 384 TGTGACTCTATGGAGCAATTTGGACAAGAAG................... 414
||||| |||||||| ||||||||||||||||
bj00079 798 TGTGATTCTATGGAACAATTTGGACAAGAAGAGTCTTTAGACAGCTTTAC 847
C D S M E Q F G Q E E S L D S F T
851 ----+----*----+----*----+----*----+----*----+----* 900
Y Y L G G D P T Q H
msj10320 415 ....................AGTATTATTTAGGTGGTGATCCTACTCAGC 444
||||||| || |||||| || | | ||| |
bj00079 848 GTCCAACAATGGACCATTTCAGTATTACTTGGGTGGTCATTCCAGTCAAC 897
S N N G P F Q Y Y L G G H S S Q P
901 ----+----*----+----*----+----*----+----*----+----* 950
L E S S G F C E D A Q Q S P G N
msj10320 445 ACTTGGAAAGTTCTGGTTTTTGTGAAGATGCTCAGCAATCTCCTGGAAAT 494
| |||||| |||||| ||| |||||||| ||| | |||||||||||
bj00079 898 CCATGGAAAATTCTGGATTTCGTGAAGATATTCAAGTACCTCCTGGAAAT 947
M E N S G F R E D I Q V P P G N
951 ----+----*----+----*----+----*----+----*----+----* 1000
G S I G K M W M V A V K G K G E V
msj10320 495 GGCAGCATTGGGAAAATGTGGATGGTAGCAGTCAAAGGAAAAGGCGAAGT 544
|||| ||||||||| ||| | |||| ||||| |||||||||| |||||
bj00079 948 GGCAACATTGGGAATATGCAGGTGGTTGCAGTTGAAGGAAAAGGTGAAGT 997
G N I G N M Q V V A V E G K G E V
1001 ----+----*----+----*----+----*----+----*----+----* 1050
K H G G E D G R S S S G A P H R E
msj10320 545 GAAACACGGAGGAGAAGATGGCAGAAGTAGCAGTGGAGCACCGCACCGTG 594
|| || ||||||||||||||||| | || ||| ||||| || ||||| |
bj00079 998 CAAGCATGGAGGAGAAGATGGCAGGAATAACAGCGGAGCGCCACACCGGG 1047
K H G G E D G R N N S G A P H R E
1051 ----+----*----+----*----+----*----+----*----+----* 1100
T R G G E S E D F S S V R R G R
msj10320 595 AGACGAGAGGTGGAGAGAGCGAGGACTTCTCCAGTGTCAGGAGAGGGAGA 644
||| | |||| ||||| | || || ||||| | ||| || ||||| ||
bj00079 1048 AGAAGCGAGGCGGAGAAACTGATGAATTCTCTAATGTTAGAAGAGGAAG. 1096
K R G G E T D E F S N V R R G R
1101 ----+----*----+----*----+----*----+----*----+----* 1150
G N R I P H L S E G P K G R Q V
msj10320 645 GTAGGGAATAGAATACCACATTTGAGCGAAGGACCCAAGGGTCGGCAAGT 694
||| |||| || | ||| |||||||||||| ||||||| ||||| ||
bj00079 1097 ..AGGACATAGGATGCAACACTTGAGCGAAGGAACCAAGGGCCGGCAGGT 1144
G H R M Q H L S E G T K G R Q V
1151 ----+----*----+----*----+----*----+----*----+----* 1200
G S G G D G E R W G S D R G S R G
msj10320 695 AGGAAGTGGAGGTGATGGAGAACGCTGGGGCTCAGACCGGGGGTCCAGAG 744
||||||||||||||||| || ||||||||||| ||| | |||||| |||
bj00079 1145 GGGAAGTGGAGGTGATGGGGAGCGCTGGGGCTCCGACAGAGGGTCCCGAG 1194
G S G G D G E R W G S D R G S R G
1201 ----+----*----+----*----+----*----+----*----+----* 1250
S L N E Q I A L V L I R L Q E D
msj10320 745 GCAGCCTCAATGAGCAGATCGCTCTTGTGCTCATTAGATTGCAGGAGGAC 794
|||||||||||||||||||||| || ||||| || ||| |||||||||||
bj00079 1195 GCAGCCTCAATGAGCAGATCGCCCTCGTGCTGATGAGACTGCAGGAGGAC 1244
S L N E Q I A L V L M R L Q E D
1251 ----+----*----+----*----+----*----+----*----+----* 1300
M Q N V L Q R L H K L E T L T A S
msj10320 795 ATGCAGAATGTCCTTCAGAGACTTCATAAACTGGAAACACTAACTGCTTC 844
||||||||||||||||||||||| || ||||||||||| || |||||||
bj00079 1245 ATGCAGAATGTCCTTCAGAGACTGCAGAAACTGGAAACGCTGACTGCTTT 1294
M Q N V L Q R L Q K L E T L T A L
1301 ----+----*----+----*----+----*----+----*----+----* 1350
Q A K L - L Q T S N Q P S S
msj10320 845 GCAGGCGAAATTAT.........CTTTGCAGACAAGTAATCAGCCCTCCT 885
|||||| |||| || | |||||||| | ||||||| |||
bj00079 1295 GCAGGCAAAATCATCAACATCAACATTGCAGACTGCTCCTCAGCCCACCT 1344
Q A K S S T S T L Q T A P Q P T S
1351 ----+----*----+----*----+----*----+----*----+----* 1400
Q R P A W W P F E M S P G A L A
msj10320 886 CACAGAGACCAGCTTGGTGGCCCTTTGAGATGTCCCCTGGTGCATTAGCT 935
||||||||||| ||||||||||||| |||||||| ||||||| || |
bj00079 1345 CACAGAGACCATCTTGGTGGCCCTTCGAGATGTCTCCTGGTGTGCTAACG 1394
Q R P S W W P F E M S P G V L T
1401 ----+----*----+----*----+----*----+----*----+----* 1450
F A I I W P F I A Q W L A H L Y Y
msj10320 936 TTTGCTATTATATGGCCTTTTATTGCTCAGTGGTTGGCACATTTGTATTA 985
||||| || ||||||||||||||||| |||||||||| |||| || ||
bj00079 1395 TTTGCCATCATATGGCCTTTTATTGCACAGTGGTTGGTGTATTTATACTA 1444
F A I I W P F I A Q W L V Y L Y Y
1451 ----+----*----+----*----+----*----+----*----+----* 1500
Q R R R R K L N *
msj10320 986 TCAAAGAAGGAGAAGAAAACTAAATTGAAG.AAATGGCTTTTTACTCAAG 1034
||||||||||||||||||||| || ||| | |||||| |||| ||||||
bj00079 1445 TCAAAGAAGGAGAAGAAAACTGAACTGAGGAAAATGGTGTTTTCCTCAAG 1494
Q R R R R K L N *
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msj10320 1035 AAGACTGCTGGGCCTGGACGACCTAAGAGACGGACTGGAAATGAAGTGGA 1084
|||||| |||| ||||| ||||| ||| | | |||||| ||||
bj00079 1495 AAGACTACTGGAACTGGATGACCTCAGA.ATGAACTGGA....TTGTGGT 1539
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msj10320 1085 ATTCAGAAGAAAATCTCAGTTT.TGATGATTACGTTGCTTTT..TTGTCC 1131
|||| |||||||||| ||||| |||||||||| |||||||| ||||||
bj00079 1540 GTTCACAAGAAAATCTTAGTTTGTGATGATTACATTGCTTTTTGTTGTCC 1589
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msj10320 1132 AGTAGTTTGGTT........TATATACATAAATATTCTTTGCACTACACA 1173
|||||||| ||| |||||||| | |||| |||||||||||||
bj00079 1590 AGTAGTTTAGTTTGTGTACATATATACACATATATATTTTGCACTACACA 1639
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msj10320 1174 AATGGTAACATTTTAAAGACTAATATTGCTGATACTTGAAAAATCAATCT 1223
|| | ||||||||||| ||||||||||||||||||||||| |||||||||
bj00079 1640 AACGATAACATTTTAAGGACTAATATTGCTGATACTTGAATAATCAATCT 1689
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msj10320 1224 CAACTAGATTTTAAGTAGCATCCATAGACTTACTCT..TTTTGAGCTTGA 1271
| ||||| || ||||||| || || ||| |||| || |||| |||||
bj00079 1690 CTACTAGGTTATAAGTAGTATACACAGATTTACCCTGCCCTTGAACTTGA 1739
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msj10320 1272 AGGAC..TAAATTATTAATTATTGTTCAGTA..ATGATCACCTAATT.TT 1316
||||| |||||||||||| || || ||| ||| | |||| ||| |
bj00079 1740 AGGACATTAAATTATTAATGATCATTTGGTAACATGTTTACCTGATTATC 1789
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msj10320 1317 TTCCATA.AGAATTATAAGCTGCATTTCTAAGGCATAGCTCCAATTATGA 1365
||||||| || | ||||||||| |||| |||| | | || ||||
bj00079 1790 TTCCATAGAGTAACATAAGCTGCTTTTCAAAGGTACCATTGTGATAATGA 1839
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msj10320 1366 GATAAAATTTATA.......CTTTTTACTTTTCTAAATTAAACACAAGAA 1408
||| ||||||||| |||||| |||||||||||||| | |||||
bj00079 1840 GATCAAATTTATAAGTTATTATTTTTAATTTTCTAAATTAAATAAAAGAA 1889
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msj10320 1409 AGAATGCAAAAACAAAAGTGATTTTTTAAAAATGAGGTTAAATCGATTTT 1458
||||||| ||| || ||||| ||| ||||||| | |||||| |||
bj00079 1890 AGAATGC.AAACCAGGAGTGAATTT...CAAATGAGATGTAATCGACTTT 1935
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msj10320 1459 GCATC..AGTCACTGAACTGTCA.GCTACGTGGCAGGAACCGGACGGAAG 1505
||| |||||| || || || | | || | || || | |||||
bj00079 1936 ATATCTTAGTCACGGAGTTGCCATGGCATGTAGTAGAAAACCACAGGAAG 1985
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msj10320 1506 AATCCTCTCCAGGAGACTGGGCTTTAGTTAGTGGCTTGATTCCCC..... 1550
||| || | || | | | ||| || |
bj00079 1986 AATGGTCATATTCACTTTGTGGGCTGCCCATAATCTTTCTTGGGCATTCA 2035
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msj10320 1551 ............GGCTTGCTCAGGGGAACTCAGAAAATCATCG...TCCT 1585
|| ||||| | | ||| | | |
bj00079 2036 CAACTCTTGAGTTTGGTGTTCAGGCATCATTATTAAAAAGTGGAGTCCTA 2085
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msj10320 1586 TGTACTGCGCT.TCTGTTTACAAACGATTCACTGAACAGACTTAACTTGA 1634
||||| || | |||||||| |||| | | |||| ||||
bj00079 2086 TGTACCAGACTGAGTTTTTACAAATGATTTGCAGGCTAGACATAACCCAC 2135
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msj10320 1635 TGATGGAAATGATGAAAAACAGGCCTAATGTAGGTGTAAAAGTGTATTCA 1684
||||||||||| |||| || || | |||||||| |||||||||||||
bj00079 2136 TGATGGAAATGGTGAAGAATGAGCTTCATGTAGGTTTAAAAGTGTATTCT 2185
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msj10320 1685 AACTCTAGACACGGCTAATCAGATTTTAATTCAATCATACACACATAATC 1734
| || | | | ||||||| |||| ||||||||||| | | || ||
bj00079 2186 GAGCCTGTAGATGATTAATCAGGTTTTTATTCAATCATATAAATGTATTC 2235
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msj10320 1735 CTTTGTAATCATTTTTCTTTTAAGTGAGGATATCTACTGTCTGCTTCATA 1784
|||||||||||||||| ||||| |||||||||||| |||||||||||||
bj00079 2236 CTTTGTAATCATTTTT.GTTTAACTGAGGATATCTAGTGTCTGCTTCATA 2284
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msj10320 1785 GGGTGCTTTGCA..ATAAAATGAAAACGTATTTATACTGTTTTTACTAAG 1832
|||||||||| | ||||||||||||| |||||||||||||||||| |
bj00079 2285 GGGTGCTTTGAAATATAAAATGAAAACTTATTTATACTGTTTTTACAACA 2334
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msj10320 1833 GTAACAAAAG.....CATGATAATCCTTTTTTTTGCAAGTGTAAAC..GA 1875
|| | ||| | || || |||| |||| | | | ||| |
bj00079 2335 GTCAAAAAGGAAACACACGAAAATCACTTTTCTGCAACTGATGAACTATA 2384
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msj10320 1876 CAGTCTGGACTCTTAACTTCTTAGTGCCTCAG.TTTTCCTTTGGGGTA.. 1922
|| ||||||||||||| |||||||||||||| |||||||| ||||||
bj00079 2385 TAGACTGGACTCTTAACCTCTTAGTGCCTCAGTTTTTCCTTCGGGGTATA 2434
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msj10320 1923 ................TACTTCACAAG.GTATCAGAAGTACTTTCAGTCT 1955
||||||||| | ||| || | | || || ||
bj00079 2435 CTATTTTAGATACACCTACTTCACAGGAGTACTGGAGGGATTTGCAAGCT 2484
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msj10320 1956 ACAGGTCTCTATG..TCCACATAACTAAGGAATGCCTAACTAATGGAAAC 2003
| || | ||| |||| | | ||||| ||||| | |||| ||||
bj00079 2485 AACGGGCCAAATGCTTCCATAGGAATAAGGCATGCCCAGCTAACAGAAAT 2534
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msj10320 2004 TTAAGTTCCT..........TCTAGCCATTAAAACAGAGAGAAGA..TCA 2041
|||||| ||| ||| | || | || | |||||| ||
bj00079 2535 TTAAGTCCCTCTTCCCCACCTCTCTCATCTAGACCAAAAAGAAGACTACA 2584
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msj10320 2042 ATTTAGATCCCGGAACACTGTATTTGAAAAATAATCTTCCTGTGTACTTT 2091
|||||||||| | | || | ||||||| | | ||
bj00079 2585 ATTTAGATCCTTGGAGAC................TTTTCCTGTATGCCTT 2618
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msj10320 2092 CTCAAA...CCTGCGCTCAGTAATATACTTTATTCTTTGAAGATTTAATT 2138
| ||| ||||| | | || ||| || | |||||||||||| ||
bj00079 2619 CCAAAACTTCCTGCTCACTTAGATGTACCTTGTGCTTTGAAGATTTCTTT 2668
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msj10320 2139 TAAAAACTTCATAGAAAATCCTTTTTTGCTTTTCCTTTTGAG........ 2180
| | | | || | |||| |||| | |||
bj00079 2669 GATGCAGTCTTTGTAACAAATAATTTTTTTTTTTAAATGGAGTTTCTCTC 2718
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msj10320 2181 ......................ACAGAGTTTTGGTAGCTCCTACCAGCCT 2208
| | || | | |||| || | |
bj00079 2719 TTGTTGCCCAGGCTGGAGGGCAATGGCGTGATCTTGGCTCACTGCAACTT 2768
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msj10320 2209 CCA............................................... 2211
|||
bj00079 2769 CCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCACTCCCAAGTAGCTGGG 2818
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msj10320 2212 .................................................. 2212
bj00079 2819 ATTACAGGCATGCACCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAG 2868
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msj10320 2212 ......ATTCTCTATGTAGCTGAAGATGACCTTGACTACC.......... 2245
||||| |||| | | | | ||| || | ||
bj00079 2869 ACGGGGTTTCTCCATGTTGGTAAGGCTGATCTCAAACTCCCAACCTCAGG 2918
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msj10320 2246 TGAGTTTCCTGTCTCTACTTCTTTTCAGCTTCTGGGACCACAGGCCTGTA 2295
||| | |||| ||| | || | | |||||| | |||| ||
bj00079 2919 TGATCTGCCTGCCTCGGC..CTCCCAAAGTGCTGGGATTAGAGGCGTGAG 2966
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msj10320 2296 CCACCATGGCCAGCTTTAGAGAGTAAAACATTTTAATTTGTTCTTGATTT 2345
|||| | || | || ||| ||||| | |||| | |
bj00079 2967 CCACTGCACCTGGCCT...GTAGCAAATAATTTTTAAGCATTCTCAAGAT 3013
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msj10320 2346 GTATGATGTTGGGGGCGTTAGCATTACGTGTTGAATATTTTGAGTAAGAA 2395
||||||||||||| ||| ||| | |||| | | || ||| |
bj00079 3014 GTATGATGTTGGG...TTTAACATCATATGTTCACAGTGTT..TTAAATA 3058
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msj10320 2396 GAAAAGAATCCATCTTCAGAATATAGGGTTGTTCTTTG...GGAAAAAGA 2442
||| |||| |||| || ||| ||| | |||||||| | || |
bj00079 3059 AGAAATAATCTGTCTTTAGTATACAGGATGGTTCTTTGTTTGCCTGAAAA 3108
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msj10320 2443 GTATAAGAACATAATTTCTTTGTCCTAGACTTTACAAATTTTTCAAAACT 2492
||||||||| | ||||| || ||| | ||| | || |
bj00079 3109 GTATAAGAATACAATTTACTTTTCCCAAACTCTTTTTCCTTATTTTTTTC 3158
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msj10320 2493 GTAACTTTATTTTAAACTTGTGTATCACAACTTGGTTGA......TATGC 2536
| || || || | | ||| || || || | | ||
bj00079 3159 TTTCAAATAACTTTAATTATTTAATCCCATACTGATTAAAATATGTCTGT 3208
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msj10320 2537 CTAAAATGATCTACTGGCTTTTGCTTATGATTAAAAAACCTCAAATCTAT 2586
||||| |||||||| ||||||| | ||| |
bj00079 3209 CTAAAGGGATCTACTACTATTTGCTT..............TTAAAAAAGT 3244
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msj10320 2587 CTTCTACATTTTAAAAGGAAGAAAAAAAAGCAAATAACTGAATTATTATA 2636
||| |||| ||||| ||| |||||| ||||||||| |||
bj00079 3245 GTTCCCTATTTATTTAGGAA.AAAGTGAAGCAAGCAACTGAATTTATATG 3293
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msj10320 2637 GAAAA.....CTTTAGACCTGTG....ACATTTTTTTGTTTTAAATTACA 2677
|||| |||||||||||| | | || || | |||| | |
bj00079 3294 TAAAAATAACATTTAGACCTGTGGATCAAAGATTATTTTCAAAAATGAGA 3343
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msj10320 2678 AAAGAGGTTGGTATGATAAAGTGATGGCTTTTTTCT.......TATATAA 2720
| | ||||||| | || || ||||| ||| || ||||
bj00079 3344 TATCAATTTGGTATCAGTAAAAAGTGTCTTTTCTCTTAGTATATAAATAA 3393
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msj10320 2721 ATAGAATGCAAATCAAAGATATAACCAG.TGTGATTGATTGCAAGTAGTC 2769
||| ||||||||| || | ||| ||| ||||| | ||| |||| ||||
bj00079 3394 ATAAAATGCAAATTAAGAGTGTAAGCAGTTGTGAATCATTACAAGCAGTC 3443
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msj10320 2770 AAGTGTAACTAACTCCTAAGGGCAACCATTTGTATCTTATATATCAGAAT 2819
| ||||||||||||| || |||||||| |||| | | || |
bj00079 3444 TGGGATAACTAACTCCTAGGGATAACCATTTCTATCCTGTTCCAAAGTCT 3493
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msj10320 2820 TACTTTATAGTTTG.AAAGCACTTTGCACACATTTCCTGTATATA..... 2863
|| ||||||||||| ||||||||||||||||| ||| ||||||||
bj00079 3494 TATTTTATAGTTTGAAAAGCACTTTGCACACAGTTCTTGTATATAAAAGT 3543
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msj10320 2864 AAGGATGTAATTACAGGATATAGTGGTAATGCAT..TAAAACATGAACCT 2911
|| |||||||||| ||||||||||| | ||| | | || | ||||||
bj00079 3544 AAAGATGTAATTATAGGATATAGTGTTCCTGCTTTGTTTAATAAGAACCT 3593
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msj10320 2912 CATTTTAGAAATCGACAGCTATGGTATTTTTTTAATGAT..CAGCTTTTC 2959
||||| || | |||||||||||||||||||||||||| | ||||||
bj00079 3594 CATTT..AAACTTGACAGCTATGGTATTTTTTTAATGATAACTTCTTTTC 3641
3701 ----+----*----+----*----+----*----+----*----+-- 3747
msj10320 2960 TGTTTATTGTAAAACTAAGTTAAAAAATAAAAGGTTAATGAGAAATG 3006
||||||||||||||||||||| ||||||||||||||||||||
bj00079 3642 TGTTTATTGTAAAACTAAGTT.AAAAATAAAAGGTTAATGAG..... 3682