Comparison of KIAA cDNA sequences between mouse and human (KIAA1882)
<<Original sequence data>>
mouse mKIAA1882 (msj10303) length: 2041 bp, CDS: 2 - 1672
human KIAA1882 (aj00515) length: 4247 bp, CDS: 1 - 3531
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 1860 - 1860 1 0 0.0
CDS: 1861 - 3531 1404 267 16.0
3'UTR: 3532 - 4251 209 166 44.3
amino acid
CDS: 1861 - 3531 504 53 9.5
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msj10303 1 .................................................. 1
aj00515 1 GGCCGCAGAGGCTGCTCGGCCCCGCTGCCCGCCAGGTCGTGGGCTCCCGC 50
G R R G C S A P L P A R S W A P A
51 ----+----*----+----*----+----*----+----*----+----* 100
msj10303 1 .................................................. 1
aj00515 51 TCCGGGCCCGGGGCCACCGGCTGTGGACTTCAAAATGAGCGTCCCTGACT 100
P G P G P P A V D F K M S V P D Y
101 ----+----*----+----*----+----*----+----*----+----* 150
msj10303 1 .................................................. 1
aj00515 101 ACATGCAGTGTGCTGAGGACCACCAGACGCTGCTCGTGGTGGTCCAGCCT 150
M Q C A E D H Q T L L V V V Q P
151 ----+----*----+----*----+----*----+----*----+----* 200
msj10303 1 .................................................. 1
aj00515 151 GTGGGCATCGTCTCCGAGGAGAACTTCTTCAGGATCTATAAGAGGATTTG 200
V G I V S E E N F F R I Y K R I C
201 ----+----*----+----*----+----*----+----*----+----* 250
msj10303 1 .................................................. 1
aj00515 201 CTCTGTGAGTCAGATCAGCGTGCGGGACTCCCAGCGAGTCCTCTACATCC 250
S V S Q I S V R D S Q R V L Y I R
251 ----+----*----+----*----+----*----+----*----+----* 300
msj10303 1 .................................................. 1
aj00515 251 GCTACAGGCACCACTACCCACCCGAGAACAACGAGTGGGGCGACTTCCAG 300
Y R H H Y P P E N N E W G D F Q
301 ----+----*----+----*----+----*----+----*----+----* 350
msj10303 1 .................................................. 1
aj00515 301 ACCCACCGCAAAGTCGTGGGCCTCATCACCATCACAGACTGCTTCTCGGC 350
T H R K V V G L I T I T D C F S A
351 ----+----*----+----*----+----*----+----*----+----* 400
msj10303 1 .................................................. 1
aj00515 351 CAAGGACTGGCCACAGACCTTCGAGAAGTTCCACGTGCAGAAGGAGATCT 400
K D W P Q T F E K F H V Q K E I Y
401 ----+----*----+----*----+----*----+----*----+----* 450
msj10303 1 .................................................. 1
aj00515 401 ACGGCTCCACACTGTATGACTCCCGGCTCTTTGTCTTCGGGCTGCAGGGG 450
G S T L Y D S R L F V F G L Q G
451 ----+----*----+----*----+----*----+----*----+----* 500
msj10303 1 .................................................. 1
aj00515 451 GAGATCGTGGAGCAGCCGCGCACCGACGTGGCTTTCTACCCCAATTACGA 500
E I V E Q P R T D V A F Y P N Y E
501 ----+----*----+----*----+----*----+----*----+----* 550
msj10303 1 .................................................. 1
aj00515 501 GGACTGCCAGACGGTGGAGAAGAGAATCGAGGACTTCATCGAGTCACTGT 550
D C Q T V E K R I E D F I E S L F
551 ----+----*----+----*----+----*----+----*----+----* 600
msj10303 1 .................................................. 1
aj00515 551 TCATCGTGCTGGAGTCCAAGCGTCTGGACAGAGCCACAGACAAGTCTGGG 600
I V L E S K R L D R A T D K S G
601 ----+----*----+----*----+----*----+----*----+----* 650
msj10303 1 .................................................. 1
aj00515 601 GATAAGATCCCCCTTCTCTGTGTCCCGTTTGAGAAAAAGGACTTTGTAGG 650
D K I P L L C V P F E K K D F V G
651 ----+----*----+----*----+----*----+----*----+----* 700
msj10303 1 .................................................. 1
aj00515 651 ACTGGACACAGACAGCAGACATTACAAGAAGCGGTGCCAAGGCCGCATGC 700
L D T D S R H Y K K R C Q G R M R
701 ----+----*----+----*----+----*----+----*----+----* 750
msj10303 1 .................................................. 1
aj00515 701 GGAAGCACGTGGGGGACCTGTGCCTGCAGGCAGGGATGCTGCAGGACTCC 750
K H V G D L C L Q A G M L Q D S
751 ----+----*----+----*----+----*----+----*----+----* 800
msj10303 1 .................................................. 1
aj00515 751 CTGGTGCATTACCACATGTCGGTGGAGCTGCTGCGTTCTGTGAATGACTT 800
L V H Y H M S V E L L R S V N D F
801 ----+----*----+----*----+----*----+----*----+----* 850
msj10303 1 .................................................. 1
aj00515 801 TCTGTGGCTTGGAGCTGCCCTGGAAGGATTGTGTTCAGCTTCTGTCATCT 850
L W L G A A L E G L C S A S V I Y
851 ----+----*----+----*----+----*----+----*----+----* 900
msj10303 1 .................................................. 1
aj00515 851 ATCACTATCCTGGTGGAACTGGTGGGAAGAGTGGAGCTCGGAGGTTCCAG 900
H Y P G G T G G K S G A R R F Q
901 ----+----*----+----*----+----*----+----*----+----* 950
msj10303 1 .................................................. 1
aj00515 901 GGCAGCACCCTTCCTGCTGAAGCAGCCAATAGACACCGGCCAGGGGCACA 950
G S T L P A E A A N R H R P G A Q
951 ----+----*----+----*----+----*----+----*----+----* 1000
msj10303 1 .................................................. 1
aj00515 951 GGAAGTTCTCATTGATCCAGGTGCCCTCACCACCAATGGCATCAACCCTG 1000
E V L I D P G A L T T N G I N P D
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msj10303 1 .................................................. 1
aj00515 1001 ACACCAGTACTGAGATCGGACGTGCTAAGAACTGCCTTAGCCCTGAAGAC 1050
T S T E I G R A K N C L S P E D
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msj10303 1 .................................................. 1
aj00515 1051 ATAATTGACAAGTATAAAGAGGCGATTTCCTATTACAGCAAGTATAAGAA 1100
I I D K Y K E A I S Y Y S K Y K N
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msj10303 1 .................................................. 1
aj00515 1101 TGCGGGAGTGATTGAGTTAGAAGCGTGCATCAAGGCTGTACGTGTCCTTG 1150
A G V I E L E A C I K A V R V L A
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msj10303 1 .................................................. 1
aj00515 1151 CAATTCAGAAACGGAGCATGGAAGCATCAGAATTTCTTCAGAATGCAGTT 1200
I Q K R S M E A S E F L Q N A V
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msj10303 1 .................................................. 1
aj00515 1201 TACATTAACCTTCGACAGCTTTCTGAGGAAGAGAAAATTCAGCGCTACAG 1250
Y I N L R Q L S E E E K I Q R Y S
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msj10303 1 .................................................. 1
aj00515 1251 CATCCTCTCCGAGCTCTATGAGCTGATCGGCTTCCATCGCAAGTCTGCGT 1300
I L S E L Y E L I G F H R K S A F
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msj10303 1 .................................................. 1
aj00515 1301 TCTTCAAGCGCGTGGCCGCCATGCAGTGCGTGGCCCCAAGCATCGCGGAG 1350
F K R V A A M Q C V A P S I A E
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msj10303 1 .................................................. 1
aj00515 1351 CCTGGGTGGAGGGCCTGCTACAAACTCCTCCTGGAAACGCTGCCCGGCTA 1400
P G W R A C Y K L L L E T L P G Y
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msj10303 1 .................................................. 1
aj00515 1401 CAGTCTGTCGCTGGATCCCAAAGATTTCAGCAGAGGCACGCACAGAGGCT 1450
S L S L D P K D F S R G T H R G W
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msj10303 1 .................................................. 1
aj00515 1451 GGGCTGCGGTCCAGATGCGTTTGCTCCATGAATTGGTCTACGCCTCCCGA 1500
A A V Q M R L L H E L V Y A S R
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msj10303 1 .................................................. 1
aj00515 1501 AGGATGGGGAACCCTGCCCTCTCTGTCAGACACCTGTCCTTCCTTCTACA 1550
R M G N P A L S V R H L S F L L Q
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msj10303 1 .................................................. 1
aj00515 1551 GACCATGCTGGACTTCTTGTCGGATCAGGAAAAGAAAGATGTGGCCCAAA 1600
T M L D F L S D Q E K K D V A Q S
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msj10303 1 .................................................. 1
aj00515 1601 GCCTAGAGAACTATACGTCCAAGTGTCCTGGGACCATGGAGCCCATCGCC 1650
L E N Y T S K C P G T M E P I A
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msj10303 1 .................................................. 1
aj00515 1651 CTCCCTGGCGGCCTCACCCTGCCACCGGTGCCCTTCACCAAGCTTCCCAT 1700
L P G G L T L P P V P F T K L P I
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msj10303 1 .................................................. 1
aj00515 1701 CGTCAGGCATGTGAAACTATTGAACCTTCCTGCTAGCCTCCGGCCACACA 1750
V R H V K L L N L P A S L R P H K
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msj10303 1 .................................................. 1
aj00515 1751 AAATGAAAAGCTTGCTGGGTCAGAACGTGTCAACCAAAAGTCCTTTCATC 1800
M K S L L G Q N V S T K S P F I
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msj10303 1 .................................................. 1
aj00515 1801 TATTCACCAATTATCGCACACAACCGTGGAGAAGAGCGGAACAAGAAAAT 1850
Y S P I I A H N R G E E R N K K I
1851 ----+----*----+----*----+----*----+----*----+----* 1900
W V Q G D V C E V Q L M V Y
msj10303 1 .........GTGGGTTCAAGGAGATGTGTGTGAAGTTCAGCTGATGGTGT 41
||||||||||||||||||||||||||||||||||||||| |
aj00515 1851 AGATTTCCAGTGGGTTCAAGGAGATGTGTGTGAAGTTCAGCTGATGGTAT 1900
D F Q W V Q G D V C E V Q L M V Y
1901 ----+----*----+----*----+----*----+----*----+----* 1950
N P M P F E L R V E N M G L L T
msj10303 42 ACAACCCAATGCCGTTTGAGCTCCGCGTGGAAAACATGGGGCTTCTCACC 91
| ||||||||||||||||| || || || |||||||||||||| ||||||
aj00515 1901 ATAACCCAATGCCGTTTGAACTTCGAGTTGAAAACATGGGGCTGCTCACC 1950
N P M P F E L R V E N M G L L T
1951 ----+----*----+----*----+----*----+----*----+----* 2000
S G V E F E S L P A A L S L P A E
msj10303 92 AGCGGAGTGGAGTTTGAGTCTCTTCCTGCAGCGCTTTCCCTCCCTGCGGA 141
|||||||||||||| |||||||| ||||| |||||||| || || || ||
aj00515 1951 AGCGGAGTGGAGTTCGAGTCTCTCCCTGCGGCGCTTTCTCTTCCGGCTGA 2000
S G V E F E S L P A A L S L P A E
2001 ----+----*----+----*----+----*----+----*----+----* 2050
S G L Y P V T L V G V P Q T T G M
msj10303 142 ATCTGGTTTGTACCCGGTGACGCTGGTCGGAGTCCCACAGACTACAGGAA 191
||||||| ||||||| |||||||| ||||| ||||| ||||| || ||||
aj00515 2001 ATCTGGTCTGTACCCAGTGACGCTCGTCGGGGTCCCGCAGACGACTGGAA 2050
S G L Y P V T L V G V P Q T T G T
2051 ----+----*----+----*----+----*----+----*----+----* 2100
I T V N G Y H T T V F G V F S D
msj10303 192 TGATCACTGTGAATGGTTACCATACCACAGTCTTTGGGGTCTTCAGCGAC 241
||| |||||||| |||||||||||||| ||||| || || ||||| |||
aj00515 2051 CGATTACTGTGAACGGTTACCATACCACGGTCTTCGGTGTGTTCAGTGAC 2100
I T V N G Y H T T V F G V F S D
2101 ----+----*----+----*----+----*----+----*----+----* 2150
C L L D N L P G L K T G G S T V E
msj10303 242 TGCCTTCTGGACAACCTTCCGGGACTGAAGACGGGCGGCTCCACCGTGGA 291
|| | ||||| ||||| |||||| | || || | |||||||| |||||
aj00515 2101 TGTTTGCTGGATAACCTGCCGGGAATAAAAACCAGTGGCTCCACAGTGGA 2150
C L L D N L P G I K T S G S T V E
2151 ----+----*----+----*----+----*----+----*----+----* 2200
V I P A L P R L Q I S T S L P R S
msj10303 292 AGTCATCCCTGCCTTGCCAAGACTGCAGATCAGCACATCGCTGCCCAGGT 341
|||||| || || ||||||||||||||||||||||| || |||||||| |
aj00515 2151 AGTCATTCCCGCGTTGCCAAGACTGCAGATCAGCACCTCTCTGCCCAGAT 2200
V I P A L P R L Q I S T S L P R S
2201 ----+----*----+----*----+----*----+----*----+----* 2250
A R S L Q P S A G D E I A T N V
msj10303 342 CCGCACGCTCACTGCAGCCTTCTGCCGGCGATGAGATCGCCACCAACGTA 391
| |||| ||| |||| |||||| | || ||||| || | || || |||
aj00515 2201 CTGCACATTCATTGCAACCTTCTTCTGGTGATGAAATATCTACTAATGTA 2250
A H S L Q P S S G D E I S T N V
2251 ----+----*----+----*----+----*----+----*----+----* 2300
S V Q L Y N G E T Q Q L A V T L E
msj10303 392 TCTGTTCAGCTGTACAACGGAGAAACCCAGCAGCTGGCTGTCACCTTGGA 441
||||| ||||| ||||| ||||||| ||||| || | | |||||
aj00515 2251 TCTGTCCAGCTTTACAATGGAGAAAGTCAGCAACTAATCATTAAATTGGA 2300
S V Q L Y N G E S Q Q L I I K L E
2301 ----+----*----+----*----+----*----+----*----+----* 2350
N I G L E P L E Q L E V T S K L L
msj10303 442 GAACATCGGACTGGAGCCTCTGGAGCAGCTGGAGGTCACCTCAAAGCTTC 491
|| || ||| |||| || ||||| | |||||||||||||| || |||
aj00515 2301 AAATATTGGAATGGAACCATTGGAGAAACTGGAGGTCACCTCGAAAGTTC 2350
N I G M E P L E K L E V T S K V L
2351 ----+----*----+----*----+----*----+----*----+----* 2400
T T K E K L Y G D F L S W K L E
msj10303 492 TCACCACCAAGGAAAAGTTGTATGGCGACTTCTTGAGCTGGAAACTGGAA 541
||||||| || ||||| |||||||||||||||||||||||||| || ||
aj00515 2351 TCACCACTAAAGAAAAATTGTATGGCGACTTCTTGAGCTGGAAGCTAGAG 2400
T T K E K L Y G D F L S W K L E
2401 ----+----*----+----*----+----*----+----*----+----* 2450
E T L A Q F P L Q P G K V A T F T
msj10303 542 GAGACGCTGGCCCAGTTTCCCCTGCAGCCCGGGAAGGTGGCTACTTTCAC 591
|| || || |||||||| || ||||||| ||||||||||| || |||||
aj00515 2401 GAAACCCTTGCCCAGTTCCCTTTGCAGCCTGGGAAGGTGGCCACGTTCAC 2450
E T L A Q F P L Q P G K V A T F T
2451 ----+----*----+----*----+----*----+----*----+----* 2500
I N I K A K L D F S C Q E N L L Q
msj10303 592 CATCAACATCAAGGCAAAGCTGGATTTCTCTTGCCAGGAGAATCTTCTCC 641
||||||||||| | |||||||||||||| |||||||||||||| || |
aj00515 2451 AATCAACATCAAAGTGAAGCTGGATTTCTCCTGCCAGGAGAATCTCCTGC 2500
I N I K V K L D F S C Q E N L L Q
2501 ----+----*----+----*----+----*----+----*----+----* 2550
D L S D D G I S V S G F P L S S
msj10303 642 AGGACCTGAGTGATGATGGAATCAGCGTGAGCGGCTTTCCCCTGTCCAGT 691
|||| || ||||||||||||||||| ||||| ||||||||||||||||||
aj00515 2501 AGGATCTCAGTGATGATGGAATCAGTGTGAGTGGCTTTCCCCTGTCCAGT 2550
D L S D D G I S V S G F P L S S
2551 ----+----*----+----*----+----*----+----*----+----* 2600
P F R Q V V R P R V E S R P T N P
msj10303 692 CCTTTCCGCCAGGTGGTGCGGCCCCGAGTGGAGAGCAGACCCACAAACCC 741
||||| || ||||| || ||||||||||||||| ||| ||| |||||
aj00515 2551 CCTTTTCGGCAGGTCGTTCGGCCCCGAGTGGAGGGCAAACCTGTGAACCC 2600
P F R Q V V R P R V E G K P V N P
2601 ----+----*----+----*----+----*----+----*----+----* 2650
S E G S K T G D L G H V K T L E A
msj10303 742 TTCTGAGGGCAGCAAGACGGGGGACCTTGGCCACGTCAAGACTCTGGAAG 791
| ||| ||| ||| | || ||| ||||||| ||||| |||||||
aj00515 2601 ACCCGAGAGCAACAAAGCAGGCGACTACAGCCACGTGAAGACCCTGGAAG 2650
P E S N K A G D Y S H V K T L E A
2651 ----+----*----+----*----+----*----+----*----+----* 2700
V L N F K Y S G G P G H V E G Y
msj10303 792 CTGTCCTGAACTTCAAGTACTCTGGAGGCCCAGGCCACGTGGAAGGGTAT 841
|||||||||| ||||| |||||||||||||| |||||| ||||| |||
aj00515 2651 CTGTCCTGAATTTCAAATACTCTGGAGGCCCGGGCCACACTGAAGGATAT 2700
V L N F K Y S G G P G H T E G Y
2701 ----+----*----+----*----+----*----+----*----+----* 2750
Y R N L S L G L H V E V E P S V F
msj10303 842 TACAGGAACCTCTCCCTGGGACTACACGTGGAAGTCGAGCCTTCTGTGTT 891
|||||||| ||||||||||| || || || ||||||||||| ||||| ||
aj00515 2701 TACAGGAATCTCTCCCTGGGGCTGCATGTAGAAGTCGAGCCGTCTGTATT 2750
Y R N L S L G L H V E V E P S V F
2751 ----+----*----+----*----+----*----+----*----+----* 2800
F T R V S T L P A T S T R Q C H L
msj10303 892 TTTTACCCGAGTCAGCACACTTCCAGCAACCAGCACCCGGCAGTGCCACT 941
||| |||||||||||||| || ||||||||||| ||||||||||| |||
aj00515 2751 TTTCACCCGAGTCAGCACCCTCCCAGCAACCAGTACCCGGCAGTGTCACC 2800
F T R V S T L P A T S T R Q C H L
2801 ----+----*----+----*----+----*----+----*----+----* 2850
L L D V F N S T E H E L T V C A
msj10303 942 TGCTCCTTGATGTCTTCAACTCCACAGAGCACGAGCTGACAGTCTGCGCC 991
||||||| ||||||||||||||||| ||||| |||||||| ||| || ||
aj00515 2801 TGCTCCTGGATGTCTTCAACTCCACCGAGCATGAGCTGACCGTCAGCACC 2850
L L D V F N S T E H E L T V S T
2851 ----+----*----+----*----+----*----+----*----+----* 2900
R N N S E L V L H A S E C Q R M A
msj10303 992 AGGAACAACTCTGAACTTGTCCTGCATGCCAGTGAGTGCCAGCGAATGGC 1041
|||| || | | ||| ||||||| ||| | |||||||||||||||||
aj00515 2851 AGGAGCAGCGAGGCACTCATCCTGCACGCCGGCGAGTGCCAGCGAATGGC 2900
R S S E A L I L H A G E C Q R M A
2901 ----+----*----+----*----+----*----+----*----+----* 2950
I Q V D K F N F E S V P E S P G E
msj10303 1042 TATTCAAGTGGACAAGTTCAACTTTGAAAGTGTCCCAGAATCCCCCGGAG 1091
||||||||||||||||||||||||||| ||| |||| || ||||| || |
aj00515 2901 TATTCAAGTGGACAAGTTCAACTTTGAGAGTTTCCCGGAGTCCCCTGGGG 2950
I Q V D K F N F E S F P E S P G E
2951 ----+----*----+----*----+----*----+----*----+----* 3000
K G H F A N L K Q L E E E R Q E
msj10303 1092 AGAAGGGACACTTTGCAAATCTGAAGCAGCTGGAAGAAGAGAGACAGGAG 1141
||||||| || |||||||| | ||||||||||| |||||| | | |||
aj00515 2951 AGAAGGGGCAATTTGCAAACCCCAAGCAGCTGGAGGAAGAGCGGCGGGAA 3000
K G Q F A N P K Q L E E E R R E
3001 ----+----*----+----*----+----*----+----*----+----* 3050
A R G L E I S S K L D I R W R I P
msj10303 1142 GCACGAGGCCTGGAGATCAGCAGCAAGCTGGACATCCGCTGGAGAATTCC 1191
|| ||||||||||||||| ||||||||||| |||| |||||||||| ||
aj00515 3001 GCCCGAGGCCTGGAGATCCACAGCAAGCTGGGCATCTGCTGGAGAATCCC 3050
A R G L E I H S K L G I C W R I P
3051 ----+----*----+----*----+----*----+----*----+----* 3100
S L K R S G E A S V E G L L N Q L
msj10303 1192 TTCTCTGAAGCGCAGTGGTGAGGCGAGCGTGGAGGGCCTCCTGAACCAGC 1241
|| |||||||||||||| |||||||| ||||| || |||||||||||||
aj00515 3051 CTCCCTGAAGCGCAGTGGCGAGGCGAGTGTGGAAGGACTCCTGAACCAGC 3100
S L K R S G E A S V E G L L N Q L
3101 ----+----*----+----*----+----*----+----*----+----* 3150
I L E H L Q L A P L Q W D V L V
msj10303 1242 TCATCCTGGAACACCTGCAGCTGGCACCTCTGCAGTGGGATGTGCTAGTG 1291
|| ||||||| |||||||||||||| |||||||||||||||||||| |||
aj00515 3101 TCGTCCTGGAGCACCTGCAGCTGGCGCCTCTGCAGTGGGATGTGCTGGTG 3150
V L E H L Q L A P L Q W D V L V
3151 ----+----*----+----*----+----*----+----*----+----* 3200
D G Q P C D C E V A A A C Q V G D
msj10303 1292 GATGGGCAGCCATGTGACTGTGAGGTGGCAGCTGCCTGCCAGGTCGGTGA 1341
|| || |||||||||||| | |||| | || ||||||||||| || ||
aj00515 3151 GACGGACAGCCATGTGACCGCGAGGCTGTGGCGGCCTGCCAGGTGGGCGA 3200
D G Q P C D R E A V A A C Q V G D
3201 ----+----*----+----*----+----*----+----*----+----* 3250
P V R L E V R L T N R S P R S V G
msj10303 1342 CCCCGTGCGCTTGGAGGTGCGGCTGACTAACAGGAGTCCCCGAAGTGTGG 1391
|||||||||| |||||||||||||||| ||| |||| || || || || |
aj00515 3201 CCCCGTGCGCCTGGAGGTGCGGCTGACCAACCGGAGCCCGCGCAGCGTAG 3250
P V R L E V R L T N R S P R S V G
3251 ----+----*----+----*----+----*----+----*----+----* 3300
P F A L T V V P F Q D H Q N G V
msj10303 1392 GGCCCTTTGCCCTCACCGTGGTCCCTTTCCAGGACCACCAGAACGGTGTG 1441
||||||| |||||||| |||||||| |||||||||||||||||||| |||
aj00515 3251 GGCCCTTCGCCCTCACTGTGGTCCCCTTCCAGGACCACCAGAACGGCGTG 3300
P F A L T V V P F Q D H Q N G V
3301 ----+----*----+----*----+----*----+----*----+----* 3350
H N Y D L H D V I S F V G S S T F
msj10303 1442 CACAACTATGACCTGCATGATGTCATCTCCTTTGTGGGTTCCAGTACCTT 1491
|||||||| |||||||| || | ||||||| ||||| ||||| |||||
aj00515 3301 CACAACTACGACCTGCACGACACCGTCTCCTTCGTGGGCTCCAGCACCTT 3350
H N Y D L H D T V S F V G S S T F
3351 ----+----*----+----*----+----*----+----*----+----* 3400
Y L D T V Q P S G Q S T C L G A L
msj10303 1492 CTACCTTGACACGGTACAACCATCAGGCCAATCCACCTGCCTTGGGGCCC 1541
|||||| ||| |||| || || || ||||| || ||||||| |||||||
aj00515 3351 CTACCTCGACGCGGTGCAGCCGTCCGGCCAGTCGGCCTGCCTCGGGGCCC 3400
Y L D A V Q P S G Q S A C L G A L
3401 ----+----*----+----*----+----*----+----*----+----* 3450
L F L Y T G D F F L N I R F H E
msj10303 1542 TCCTCTTCCTCTACACAGGTGACTTCTTCCTCAACATCCGGTTCCACGAG 1591
|||||||||||||||| || |||||||||||| |||||||||||||||||
aj00515 3401 TCCTCTTCCTCTACACGGGAGACTTCTTCCTCCACATCCGGTTCCACGAG 3450
L F L Y T G D F F L H I R F H E
3451 ----+----*----+----*----+----*----+----*----+----* 3500
D C K S K E L P P S W V C L P S V
msj10303 1592 GACTGCAAGAGCAAGGAGCTGCCACCCTCCTGGGTTTGCTTACCCAGCGT 1641
||| ||| |||||||||||||||||||| ||| | ||| | ||||| ||
aj00515 3451 GACAGCACCAGCAAGGAGCTGCCACCCTCTTGGTTCTGCCTGCCCAGTGT 3500
D S T S K E L P P S W F C L P S V
3501 ----+----*----+----*----+----*----+----*----+----* 3550
H V R A L G A Q A *
msj10303 1642 GCATGTGAGGGCCCTCGGGGCACAGGCCTGAGCCCCTCATCCCGAAGGCC 1691
||| ||| | ||||| | ||| ||||||||||||| | | ||
aj00515 3501 GCACGTGTGTGCCCTGGAGGCGCAGGCCTGAGCCCGCCTACTTCCGTCCC 3550
H V C A L E A Q A *
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msj10303 1692 ATGTCCTCCA........................................ 1701
| || ||
aj00515 3551 TCTTTCTGCAGGGCCAGAGGTGACCCTGCCTGGCCTCCCACACCCCCTGC 3600
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msj10303 1702 .............TATGCCATAGCCAGCACTCCTCCTCCCTCCCAGAAGT 1738
| | |||| |||||||||| ||| |
aj00515 3601 AATGAGCAAGGCCTTCACTGCAGCCCCATCTCCTCCTCCTCCCCCAGACC 3650
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msj10303 1739 CACCCCAAGGCTC.CCCCCTGCTTTGCTTCTGGCCTATTATGCTGAGCGA 1787
| |||| ||| || |||| | | | | || | || ||||| || |
aj00515 3651 CCTCCCAGCCCTCTCCTCCTGTTCCTCCTGTAGCATCTT.TGCTGGGCTA 3699
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msj10303 1788 CCTCATATCCAGTGCCA................................. 1804
| | || | ||
aj00515 3700 CGCAGAAGCCCCGGACATGGCAGCCCCACCCCATGCCACGCCCCTTCCTA 3749
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msj10303 1805 .................................................. 1805
aj00515 3750 CACTGTTCCCTGGACCATACACAGGCTGAAGCAGAGGAAATCCCAAAGCG 3799
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msj10303 1805 .................................................. 1805
aj00515 3800 GGTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACC 3849
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msj10303 1805 .....GCCTGGGCGGCCCTGGATGGCCAGCACTGCAGAGGAGCCTTTCTG 1849
|| | || | | || || | | ||||||| ||| ||
aj00515 3850 TGGGGCCCCAGCCGTGCTGTGCTGCTCATCCCAGCAGAGGGACCTCCCTC 3899
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msj10303 1850 ATCTGCCATCTCCCCTT................................. 1866
|| | || |||||
aj00515 3900 GTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTG 3949
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msj10303 1867 ...............................................GTG 1869
|
aj00515 3950 GGCACAGCCTGAGGGCGTGGGCAGCTTCCCACCCTCCCTGGGCCTTGGAA 3999
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msj10303 1870 TCTCCTGAGGTCTGGCTCACCCCTGCAAATGTCACTGGCAACCCAAGCAA 1919
|| || ||| | | |||| | | | ||| | | |||
aj00515 4000 TCCCCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCA. 4048
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msj10303 1920 GGAGGGAGACAGTG.................................... 1933
| |||| |||
aj00515 4049 ..GGAGAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGG 4096
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msj10303 1934 ................................TGGGTGAGCAGGGTGAGC 1951
|||| |||| |
aj00515 4097 CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG 4146
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msj10303 1952 AGGCATCAGGGTGTTCCCTGCCTC.....TGTGTTCTGGTCTCCAAGTCT 1996
| || ||||| |||||| | | || |||||| ||| | ||
aj00515 4147 CTGTTTCTGGGTGCTCCCTGGCCCCAGGGTGGCGTCTGGTTACCATGGCT 4196
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msj10303 1997 GTGTATTTATGTTGCCACA.....TTCTCCAATAAA.GGCCTGCCTTGCT 2040
|||| | | | | || |||| ||||||| ||||||||| |
aj00515 4197 GTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC 4246
4251 - 4251
msj10303 2041 T 2041
aj00515 4247 C 4247