# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msj09360.fasta.nr -Q ../query/mKIAA0153.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0153, 404 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920456 sequences Expectation_n fit: rho(ln(x))= 5.0542+/-0.000181; mu= 11.0234+/- 0.010 mean_var=64.1180+/-12.406, 0's: 38 Z-trim: 44 B-trim: 9 in 1/64 Lambda= 0.160171 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|33286912|gb|AAH55368.1| Tubulin tyrosine ligase ( 639) 2855 668.4 1.2e-189 gi|123787791|sp|Q3UDE2.1|TTL12_MOUSE RecName: Full ( 639) 2855 668.4 1.2e-189 gi|148672520|gb|EDL04467.1| tubulin tyrosine ligas ( 681) 2855 668.5 1.3e-189 gi|209571551|ref|NP_001129394.1| tubulin tyrosine ( 639) 2747 643.5 4e-182 gi|149065748|gb|EDM15621.1| tubulin tyrosine ligas ( 688) 2747 643.5 4.2e-182 gi|73969353|ref|XP_531703.2| PREDICTED: similar to ( 642) 2538 595.2 1.4e-167 gi|194226942|ref|XP_001500855.2| PREDICTED: simila ( 663) 2534 594.3 2.7e-167 gi|115304731|gb|AAI23407.1| Tubulin tyrosine ligas ( 655) 2521 591.3 2.1e-166 gi|20455527|sp|Q14166.2|TTL12_HUMAN RecName: Full= ( 644) 2519 590.8 2.9e-166 gi|114686798|ref|XP_001171890.1| PREDICTED: tubuli ( 644) 2511 589.0 1e-165 gi|109094480|ref|XP_001104848.1| PREDICTED: simila ( 751) 2492 584.6 2.5e-164 gi|169159111|emb|CAQ09718.1| tubulin tyrosine liga ( 636) 2463 577.9 2.3e-162 gi|114686796|ref|XP_515178.2| PREDICTED: tubulin t ( 650) 2454 575.8 9.7e-162 gi|126339045|ref|XP_001369875.1| PREDICTED: hypoth ( 631) 2330 547.1 4e-153 gi|224095932|ref|XP_002192108.1| PREDICTED: tubuli ( 627) 2252 529.1 1.1e-147 gi|60098705|emb|CAH65183.1| hypothetical protein [ ( 627) 2247 527.9 2.4e-147 gi|29126876|gb|AAH48032.1| Zgc:55343 [Danio rerio] ( 625) 1969 463.7 5.1e-128 gi|47211506|emb|CAF94125.1| unnamed protein produc ( 605) 1814 427.9 3e-117 gi|210092694|gb|EEA40914.1| hypothetical protein B ( 624) 1506 356.7 8.3e-96 gi|149514121|ref|XP_001518003.1| PREDICTED: hypoth ( 446) 1367 324.5 2.9e-86 gi|198416361|ref|XP_002120682.1| PREDICTED: simila ( 618) 1263 300.6 6.6e-79 gi|212514801|gb|EEB17051.1| conserved hypothetical ( 609) 1197 285.3 2.5e-74 gi|91094101|ref|XP_967213.1| PREDICTED: similar to ( 599) 1189 283.5 9e-74 gi|108883705|gb|EAT47930.1| conserved hypothetical ( 628) 1055 252.5 2e-64 gi|187023565|emb|CAP37289.1| C. briggsae CBR-TTLL- ( 664) 1034 247.7 5.9e-63 gi|48095945|ref|XP_394564.1| PREDICTED: similar to ( 616) 995 238.6 2.9e-60 gi|221222884|sp|A8XXC0.2|TTL12_CAEBR RecName: Full ( 672) 992 238.0 5e-60 gi|190662437|gb|EDV59629.1| GG10708 [Drosophila er ( 626) 990 237.5 6.5e-60 gi|156229090|gb|EDO49886.1| predicted protein [Nem ( 604) 989 237.2 7.4e-60 gi|194175630|gb|EDW89241.1| GE23607 [Drosophila ya ( 618) 981 235.4 2.7e-59 gi|193902819|gb|EDW01686.1| GH21579 [Drosophila gr ( 631) 979 234.9 3.8e-59 gi|194109617|gb|EDW31660.1| GL11240 [Drosophila pe ( 627) 977 234.5 5.2e-59 gi|194192500|gb|EDX06076.1| GD10218 [Drosophila si ( 626) 976 234.2 6.1e-59 gi|54635494|gb|EAL24897.1| GA13769 [Drosophila pse ( 627) 976 234.2 6.1e-59 gi|194124780|gb|EDW46823.1| GM20754 [Drosophila se ( 626) 974 233.8 8.4e-59 gi|6686247|sp|Q09512.1|TTL12_CAEEL RecName: Full=T ( 662) 974 233.8 8.8e-59 gi|190622272|gb|EDV37796.1| GF11237 [Drosophila an ( 626) 971 233.1 1.4e-58 gi|21430284|gb|AAM50820.1| LD38689p [Drosophila me ( 626) 968 232.4 2.2e-58 gi|167865721|gb|EDS29104.1| SET and TTL domain-con ( 623) 955 229.4 1.8e-57 gi|194143594|gb|EDW59990.1| GJ21123 [Drosophila vi ( 632) 952 228.7 2.9e-57 gi|157017213|gb|EAA09047.5| AGAP004284-PA [Anophel ( 636) 952 228.7 2.9e-57 gi|194162262|gb|EDW77163.1| GK22076 [Drosophila wi ( 630) 936 225.0 3.7e-56 gi|193909615|gb|EDW08482.1| GI19551 [Drosophila mo ( 633) 928 223.2 1.3e-55 gi|76156562|gb|AAX27749.2| SJCHGC06277 protein [Sc ( 331) 888 213.7 4.8e-53 gi|12323382|gb|AAG51663.1|AC010704_7 hypothetical ( 883) 721 175.4 4.4e-41 gi|147856096|emb|CAN82450.1| hypothetical protein ( 870) 719 174.9 6e-41 gi|222833316|gb|EEE71793.1| predicted protein [Pop ( 868) 706 171.9 4.8e-40 gi|47550675|gb|AAT35236.1| At1g77550 [Arabidopsis ( 855) 680 165.9 3.1e-38 gi|195649775|gb|ACG44355.1| tubulin--tyrosine liga ( 872) 676 165.0 5.9e-38 gi|162694180|gb|EDQ80529.1| predicted protein [Phy ( 874) 666 162.7 2.9e-37 >>gi|33286912|gb|AAH55368.1| Tubulin tyrosine ligase-lik (639 aa) initn: 2855 init1: 2855 opt: 2855 Z-score: 3560.9 bits: 668.4 E(): 1.2e-189 Smith-Waterman score: 2855; 100.000% identity (100.000% similar) in 404 aa overlap (1-404:236-639) 10 20 30 mKIAA0 DFAYGEADPLIRKCMLLPWAPADMLDLSFS :::::::::::::::::::::::::::::: gi|332 TAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDFAYGEADPLIRKCMLLPWAPADMLDLSFS 210 220 230 240 250 260 40 50 60 70 80 90 mKIAA0 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|332 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA 270 280 290 300 310 320 100 110 120 130 140 150 mKIAA0 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|332 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT 330 340 350 360 370 380 160 170 180 190 200 210 mKIAA0 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|332 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS 390 400 410 420 430 440 220 230 240 250 260 270 mKIAA0 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|332 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK 450 460 470 480 490 500 280 290 300 310 320 330 mKIAA0 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|332 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG 510 520 530 540 550 560 340 350 360 370 380 390 mKIAA0 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|332 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL 570 580 590 600 610 620 400 mKIAA0 FLDETDNCHVTRII :::::::::::::: gi|332 FLDETDNCHVTRII 630 >>gi|123787791|sp|Q3UDE2.1|TTL12_MOUSE RecName: Full=Tub (639 aa) initn: 2855 init1: 2855 opt: 2855 Z-score: 3560.9 bits: 668.4 E(): 1.2e-189 Smith-Waterman score: 2855; 100.000% identity (100.000% similar) in 404 aa overlap (1-404:236-639) 10 20 30 mKIAA0 DFAYGEADPLIRKCMLLPWAPADMLDLSFS :::::::::::::::::::::::::::::: gi|123 TAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDFAYGEADPLIRKCMLLPWAPADMLDLSFS 210 220 230 240 250 260 40 50 60 70 80 90 mKIAA0 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA 270 280 290 300 310 320 100 110 120 130 140 150 mKIAA0 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT 330 340 350 360 370 380 160 170 180 190 200 210 mKIAA0 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS 390 400 410 420 430 440 220 230 240 250 260 270 mKIAA0 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK 450 460 470 480 490 500 280 290 300 310 320 330 mKIAA0 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG 510 520 530 540 550 560 340 350 360 370 380 390 mKIAA0 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL 570 580 590 600 610 620 400 mKIAA0 FLDETDNCHVTRII :::::::::::::: gi|123 FLDETDNCHVTRII 630 >>gi|148672520|gb|EDL04467.1| tubulin tyrosine ligase-li (681 aa) initn: 2855 init1: 2855 opt: 2855 Z-score: 3560.5 bits: 668.5 E(): 1.3e-189 Smith-Waterman score: 2855; 100.000% identity (100.000% similar) in 404 aa overlap (1-404:278-681) 10 20 30 mKIAA0 DFAYGEADPLIRKCMLLPWAPADMLDLSFS :::::::::::::::::::::::::::::: gi|148 TAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDFAYGEADPLIRKCMLLPWAPADMLDLSFS 250 260 270 280 290 300 40 50 60 70 80 90 mKIAA0 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA 310 320 330 340 350 360 100 110 120 130 140 150 mKIAA0 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT 370 380 390 400 410 420 160 170 180 190 200 210 mKIAA0 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS 430 440 450 460 470 480 220 230 240 250 260 270 mKIAA0 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK 490 500 510 520 530 540 280 290 300 310 320 330 mKIAA0 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG 550 560 570 580 590 600 340 350 360 370 380 390 mKIAA0 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL 610 620 630 640 650 660 400 mKIAA0 FLDETDNCHVTRII :::::::::::::: gi|148 FLDETDNCHVTRII 670 680 >>gi|209571551|ref|NP_001129394.1| tubulin tyrosine liga (639 aa) initn: 2747 init1: 2747 opt: 2747 Z-score: 3426.0 bits: 643.5 E(): 4e-182 Smith-Waterman score: 2747; 95.297% identity (99.010% similar) in 404 aa overlap (1-404:236-639) 10 20 30 mKIAA0 DFAYGEADPLIRKCMLLPWAPADMLDLSFS :.:::::::::::::::::::::::::: : gi|209 TAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDYAYGEADPLIRKCMLLPWAPADMLDLSSS 210 220 230 240 250 260 40 50 60 70 80 90 mKIAA0 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA ::::::::::::::::::::::.::::::::::.:::::::::::.:::::::::::::: gi|209 TPEPPAKYYQAILEENKEKLPLTISPVARPQGHIFRVHCDVQQVLSHLTHPRFTFTDSEA 270 280 290 300 310 320 100 110 120 130 140 150 mKIAA0 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT :::..::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|209 DADVYFHFSHFKDYTKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT 330 340 350 360 370 380 160 170 180 190 200 210 mKIAA0 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS 390 400 410 420 430 440 220 230 240 250 260 270 mKIAA0 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK :::::::::.::::::::::::::::::::::::::.:::::::::::::::.::::::: gi|209 KYIESPVLFFREDVGNVKFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRPFALNDLDDYEK 450 460 470 480 490 500 280 290 300 310 320 330 mKIAA0 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG :::::::::::::::::::::::::::: :::::: :::::::::::::.:::::::::: gi|209 HFTVMNYDPDVVLKQVHYNEFIPQFEKQNPEFPWSGVQAEIFKAFTELFEVACAKPPPMG 510 520 530 540 550 560 340 350 360 370 380 390 mKIAA0 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL :::::::::.:::::::.::.:::::::::::::::::::::::::.::::::::::::: gi|209 LCDYPSSRAIYAIDLMLKWDSHPDGKRVMQPQILEVNFNPDCERACKYHPSFFNDVFSTL 570 580 590 600 610 620 400 mKIAA0 FLDETDNCHVTRII ::::::.::::::: gi|209 FLDETDDCHVTRII 630 >>gi|149065748|gb|EDM15621.1| tubulin tyrosine ligase-li (688 aa) initn: 2747 init1: 2747 opt: 2747 Z-score: 3425.6 bits: 643.5 E(): 4.2e-182 Smith-Waterman score: 2747; 95.297% identity (99.010% similar) in 404 aa overlap (1-404:285-688) 10 20 30 mKIAA0 DFAYGEADPLIRKCMLLPWAPADMLDLSFS :.:::::::::::::::::::::::::: : gi|149 TAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDYAYGEADPLIRKCMLLPWAPADMLDLSSS 260 270 280 290 300 310 40 50 60 70 80 90 mKIAA0 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA ::::::::::::::::::::::.::::::::::.:::::::::::.:::::::::::::: gi|149 TPEPPAKYYQAILEENKEKLPLTISPVARPQGHIFRVHCDVQQVLSHLTHPRFTFTDSEA 320 330 340 350 360 370 100 110 120 130 140 150 mKIAA0 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT :::..::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|149 DADVYFHFSHFKDYTKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT 380 390 400 410 420 430 160 170 180 190 200 210 mKIAA0 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS 440 450 460 470 480 490 220 230 240 250 260 270 mKIAA0 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK :::::::::.::::::::::::::::::::::::::.:::::::::::::::.::::::: gi|149 KYIESPVLFFREDVGNVKFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRPFALNDLDDYEK 500 510 520 530 540 550 280 290 300 310 320 330 mKIAA0 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG :::::::::::::::::::::::::::: :::::: :::::::::::::.:::::::::: gi|149 HFTVMNYDPDVVLKQVHYNEFIPQFEKQNPEFPWSGVQAEIFKAFTELFEVACAKPPPMG 560 570 580 590 600 610 340 350 360 370 380 390 mKIAA0 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL :::::::::.:::::::.::.:::::::::::::::::::::::::.::::::::::::: gi|149 LCDYPSSRAIYAIDLMLKWDSHPDGKRVMQPQILEVNFNPDCERACKYHPSFFNDVFSTL 620 630 640 650 660 670 400 mKIAA0 FLDETDNCHVTRII ::::::.::::::: gi|149 FLDETDDCHVTRII 680 >>gi|73969353|ref|XP_531703.2| PREDICTED: similar to CG1 (642 aa) initn: 2538 init1: 2538 opt: 2538 Z-score: 3165.0 bits: 595.2 E(): 1.4e-167 Smith-Waterman score: 2538; 86.881% identity (96.535% similar) in 404 aa overlap (1-404:239-642) 10 20 30 mKIAA0 DFAYGEADPLIRKCMLLPWAPADMLDLSFS :::::::::::::::::::.::::::.: : gi|739 TAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDFAYGEADPLIRKCMLLPWVPADMLDFSSS 210 220 230 240 250 260 40 50 60 70 80 90 mKIAA0 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA ::::: ..:::::::::::::::::::: :. :::.:. :.::::.::.:::::::.::: gi|739 TPEPPDEHYQAILEENKEKLPLAISPVAYPRDHVFKVYTDIQQVLSHLSHPRFTFTQSEA 270 280 290 300 310 320 100 110 120 130 140 150 mKIAA0 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT ::::...::::::: .:::: :.::::::::::::::::::::::::::::::: ::::: gi|739 DADILYNFSHFKDYRRLSQERPNVLLNQFPCENLLTVKDCLASIARRAGGPEGPAWLPRT 330 340 350 360 370 380 160 170 180 190 200 210 mKIAA0 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS :::::::::::::::.:::::.::::::::::::::::::.: .:::::::::::::::: gi|739 FNLRTELPQFVSYFQQRERRGQDNHWICKPWNLARSLDTHITRSLHSIIRHRESTPKVVS 390 400 410 420 430 440 220 230 240 250 260 270 mKIAA0 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK ::::::::::::::: ::::.::.::::::.:: ::.::::::::::::::::::::::: gi|739 KYIESPVLFLREDVGPVKFDVRYVVLLRSVKPLTLFVYDVFWLRFSNRPFALDDLDDYEK 450 460 470 480 490 500 280 290 300 310 320 330 mKIAA0 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG :::::::::.::::::::.::::.::::::::::..::.:::.:::::::::::::::.: gi|739 HFTVMNYDPEVVLKQVHYDEFIPEFEKQYPEFPWKSVQGEIFQAFTELFQVACAKPPPLG 510 520 530 540 550 560 340 350 360 370 380 390 mKIAA0 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL :::::::::.::.::::.:::.:::::::::::::::::::::::::::::::::::::: gi|739 LCDYPSSRAVYAVDLMLKWDNRPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL 570 580 590 600 610 620 400 mKIAA0 FLDETDNCHVTRII .::: :::::.. gi|739 YLDEPGPCHVTRLV 630 640 >>gi|194226942|ref|XP_001500855.2| PREDICTED: similar to (663 aa) initn: 2557 init1: 2534 opt: 2534 Z-score: 3159.8 bits: 594.3 E(): 2.7e-167 Smith-Waterman score: 2534; 86.881% identity (97.030% similar) in 404 aa overlap (1-404:260-663) 10 20 30 mKIAA0 DFAYGEADPLIRKCMLLPWAPADMLDLSFS :::::::::::::::::::::::::::: : gi|194 TAPFFYMPQQLAYTLLWPLRDLDTGEEVTRDFAYGEADPLIRKCMLLPWAPADMLDLSSS 230 240 250 260 270 280 40 50 60 70 80 90 mKIAA0 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA ::::: ..::::::::::::::::::::.:: :::.:. :.::::.::::::::::..:: gi|194 TPEPPDEHYQAILEENKEKLPLAISPVAHPQDHVFKVYTDIQQVLSHLTHPRFTFTQNEA 290 300 310 320 330 340 100 110 120 130 140 150 mKIAA0 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT ::::...::::::: .:::: :.::::::::::::::::::::.:::::::::: ::::: gi|194 DADILYNFSHFKDYRRLSQERPNVLLNQFPCENLLTVKDCLASVARRAGGPEGPAWLPRT 350 360 370 380 390 400 160 170 180 190 200 210 mKIAA0 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS ::: :::::::::::.:::::.::::::::::::::::::.:..:::.::::::.::::: gi|194 FNLLTELPQFVSYFQQRERRGDDNHWICKPWNLARSLDTHITKSLHSVIRHRESSPKVVS 410 420 430 440 450 460 220 230 240 250 260 270 mKIAA0 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK ::::::::::::::: ::::::::.:::::.::::..::::::::::::::::::::::: gi|194 KYIESPVLFLREDVGRVKFDIRYIALLRSVKPLRLYVYDVFWLRFSNRPFALDDLDDYEK 470 480 490 500 510 520 280 290 300 310 320 330 mKIAA0 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG :::::::.: ::::::: .::::.::::::::::..::::::.:::::::::::::::.: gi|194 HFTVMNYNPGVVLKQVHCDEFIPEFEKQYPEFPWKSVQAEIFQAFTELFQVACAKPPPLG 530 540 550 560 570 580 340 350 360 370 380 390 mKIAA0 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL :::::::::.:::::::.:::.::::::::::::::::::::::::::::.::::::::: gi|194 LCDYPSSRAVYAIDLMLKWDNRPDGKRVMQPQILEVNFNPDCERACRYHPTFFNDVFSTL 590 600 610 620 630 640 400 mKIAA0 FLDETDNCHVTRII .::: .::::::.. gi|194 YLDEPSNCHVTRLV 650 660 >>gi|115304731|gb|AAI23407.1| Tubulin tyrosine ligase-li (655 aa) initn: 2547 init1: 2521 opt: 2521 Z-score: 3143.7 bits: 591.3 E(): 2.1e-166 Smith-Waterman score: 2521; 85.644% identity (97.277% similar) in 404 aa overlap (1-404:252-655) 10 20 30 mKIAA0 DFAYGEADPLIRKCMLLPWAPADMLDLSFS ::::::::::::.::::::::.:.:::: : gi|115 TAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDFAYGEADPLIRRCMLLPWAPTDLLDLSSS 230 240 250 260 270 280 40 50 60 70 80 90 mKIAA0 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA ::::::..::::::::::::::::::.. : :::.:. :.::::.::::::::::.::: gi|115 TPEPPAEHYQAILEENKEKLPLAISPAGYPCDHVFKVYTDIQQVLSHLTHPRFTFTQSEA 290 300 310 320 330 340 100 110 120 130 140 150 mKIAA0 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT .::....::::::: .:::: :.:::::::::.::::::::::.:::::::::: ::::: gi|115 EADVLYNFSHFKDYRRLSQERPNVLLNQFPCESLLTVKDCLASVARRAGGPEGPAWLPRT 350 360 370 380 390 400 160 170 180 190 200 210 mKIAA0 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS ::::::::::.::::.::::::::::::::::::::::::.:.:::::.:::::.::::: gi|115 FNLRTELPQFISYFQQRERRGEDNHWICKPWNLARSLDTHITKNLHSIVRHRESSPKVVS 410 420 430 440 450 460 220 230 240 250 260 270 mKIAA0 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK ::::::::::::::: ::::::::.:::::.:::::.:::::::::::::::.::::::: gi|115 KYIESPVLFLREDVGRVKFDIRYILLLRSVKPLRLFVYDVFWLRFSNRPFALNDLDDYEK 470 480 490 500 510 520 280 290 300 310 320 330 mKIAA0 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG :::::::::.:::::::::::::.::::::::::..::::::.:::::::::::.:::.: gi|115 HFTVMNYDPEVVLKQVHYNEFIPEFEKQYPEFPWKSVQAEIFQAFTELFQVACARPPPLG 530 540 550 560 570 580 340 350 360 370 380 390 mKIAA0 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL :::::::::.::.::::.::..:::.:::::::::::::::::::::::::::::::::: gi|115 LCDYPSSRAVYAVDLMLKWDSRPDGERVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL 590 600 610 620 630 640 400 mKIAA0 FLDETDNCHVTRII :::: :.: :::.. gi|115 FLDEPDGCPVTRLL 650 >>gi|20455527|sp|Q14166.2|TTL12_HUMAN RecName: Full=Tubu (644 aa) initn: 2551 init1: 2519 opt: 2519 Z-score: 3141.3 bits: 590.8 E(): 2.9e-166 Smith-Waterman score: 2519; 87.376% identity (96.040% similar) in 404 aa overlap (1-404:241-644) 10 20 30 mKIAA0 DFAYGEADPLIRKCMLLPWAPADMLDLSFS ::::::.::::::::::::::.:::::: gi|204 TAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDFAYGETDPLIRKCMLLPWAPTDMLDLSSC 220 230 240 250 260 270 40 50 60 70 80 90 mKIAA0 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA ::::::..:::::::::::::: :.::..:.::.:.:. ::::: . :::::::.:.::: gi|204 TPEPPAEHYQAILEENKEKLPLDINPVVHPHGHIFKVYTDVQQVASSLTHPRFTLTQSEA 280 290 300 310 320 330 100 110 120 130 140 150 mKIAA0 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT ::::.:.::::::: ::::: : ::::::::::::::::::::::::::::::::::::: gi|204 DADILFNFSHFKDYRKLSQERPGVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT 340 350 360 370 380 390 160 170 180 190 200 210 mKIAA0 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS :::::::::::::::.::: ::::::::::::::::::::::..:::::::::::::::: gi|204 FNLRTELPQFVSYFQQRERWGEDNHWICKPWNLARSLDTHVTKSLHSIIRHRESTPKVVS 400 410 420 430 440 450 220 230 240 250 260 270 mKIAA0 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK :::::::::::::::.::::::::::::::::::::.::::::::::: :::.::::::: gi|204 KYIESPVLFLREDVGKVKFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRAFALNDLDDYEK 460 470 480 490 500 510 280 290 300 310 320 330 mKIAA0 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG ::::::::::::::::: .::::.::::::::::.:::::::.:::::::::::::::.: gi|204 HFTVMNYDPDVVLKQVHCEEFIPEFEKQYPEFPWTDVQAEIFRAFTELFQVACAKPPPLG 520 530 540 550 560 570 340 350 360 370 380 390 mKIAA0 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL ::::::::::::.::::.::: :::.::::::::::::::::::::::::.::::::::: gi|204 LCDYPSSRAMYAVDLMLKWDNGPDGRRVMQPQILEVNFNPDCERACRYHPTFFNDVFSTL 580 590 600 610 620 630 400 mKIAA0 FLDETDNCHVTRII :::. .:::: .. gi|204 FLDQPGGCHVTCLV 640 >>gi|114686798|ref|XP_001171890.1| PREDICTED: tubulin ty (644 aa) initn: 2568 init1: 2511 opt: 2511 Z-score: 3131.3 bits: 589.0 E(): 1e-165 Smith-Waterman score: 2511; 87.129% identity (96.040% similar) in 404 aa overlap (1-404:241-644) 10 20 30 mKIAA0 DFAYGEADPLIRKCMLLPWAPADMLDLSFS ::::::.::::::::::::::.:::::: gi|114 TAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDFAYGETDPLIRKCMLLPWAPTDMLDLSSC 220 230 240 250 260 270 40 50 60 70 80 90 mKIAA0 TPEPPAKYYQAILEENKEKLPLAISPVARPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEA ::::::..:::::::::::::: :.::..:. :.:.:. ::::: . :::::::.:.::: gi|114 TPEPPAEHYQAILEENKEKLPLDINPVVHPHDHIFKVYTDVQQVASSLTHPRFTLTQSEA 280 290 300 310 320 330 100 110 120 130 140 150 mKIAA0 DADIFFHFSHFKDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT ::::.:.::::::: ::::: : ::::::::::::::::::::::::::::::::::::: gi|114 DADILFNFSHFKDYRKLSQERPGVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRT 340 350 360 370 380 390 160 170 180 190 200 210 mKIAA0 FNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVS :::::::::::::::.::: ::::::::::::::::::::::..:::::::::::::::: gi|114 FNLRTELPQFVSYFQQRERWGEDNHWICKPWNLARSLDTHVTKSLHSIIRHRESTPKVVS 400 410 420 430 440 450 220 230 240 250 260 270 mKIAA0 KYIESPVLFLREDVGNVKFDIRYIVLLRSVRPLRLFAYDVFWLRFSNRPFALDDLDDYEK :::::::::::::::.::::::::::::::::::::.::::::::::: :::.::::::: gi|114 KYIESPVLFLREDVGKVKFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRAFALNDLDDYEK 460 470 480 490 500 510 280 290 300 310 320 330 mKIAA0 HFTVMNYDPDVVLKQVHYNEFIPQFEKQYPEFPWSDVQAEIFKAFTELFQVACAKPPPMG ::::::::::::::::: .::::.::::::::::.:::::::.:::::::::::::::.: gi|114 HFTVMNYDPDVVLKQVHCEEFIPEFEKQYPEFPWTDVQAEIFRAFTELFQVACAKPPPLG 520 530 540 550 560 570 340 350 360 370 380 390 mKIAA0 LCDYPSSRAMYAIDLMLNWDNHPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTL ::::::::::::.::::.::: :::.::::::::::::::::::::::::.::::::::: gi|114 LCDYPSSRAMYAVDLMLKWDNGPDGRRVMQPQILEVNFNPDCERACRYHPTFFNDVFSTL 580 590 600 610 620 630 400 mKIAA0 FLDETDNCHVTRII :::. ..:::: .. gi|114 FLDQPSGCHVTCLV 640 404 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 02:51:17 2009 done: Fri Mar 13 02:57:40 2009 Total Scan time: 870.780 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]