Comparison of KIAA cDNA sequences between mouse and human (KIAA0153)

<< Original sequence data >>

mouse  mKIAA0153 (msj09360)     length:   2304 bp
human   KIAA0153  (ha00521)     length:   3394 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :     1212      1050      162      13.37
  Total:     1212      1050      162      13.37

  3'UTR:     1079       615      464      43.00

amino acid

  CDS1 :      404       353       51      12.62
  Total:      404       353       51      12.62
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse     1 -  1215      1 -  1215      1 -   405
         human   705 -  1919      3 -  1919    235 -   639
  3'UTR: mouse  1216 -  2304
         human  1920 -  3394
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             1 D  F  A  Y  G  E  A  D  P  L  I  R  K  C  M  L  L  17
msj09360     1 GACTTTGCCTACGGAGAGGCAGACCCTCTGATCCGGAAATGCATGCTGCT 50
               |||||||||||||||||| | ||||| ||||||||||| |||||||||||
ha00521    705 GACTTTGCCTACGGAGAGACGGACCCCCTGATCCGGAAGTGCATGCTGCT 754
           235 D  F  A  Y  G  E  T  D  P  L  I  R  K  C  M  L  L  251

            51 ----+----*----+----*----+----*----+----*----+----* 100
            18  P  W  A  P  A  D  M  L  D  L  S  F  S  T  P  E  P 34
msj09360    51 GCCCTGGGCCCCCGCCGACATGCTGGACCTCAGCTTCTCTACGCCTGAGC 100
               ||||||||||||| |||||||||||||||||||||  |  || || ||||
ha00521    755 GCCCTGGGCCCCCACCGACATGCTGGACCTCAGCTCTTGCACACCCGAGC 804
           252  P  W  A  P  T  D  M  L  D  L  S  S  C  T  P  E  P 268

           101 ----+----*----+----*----+----*----+----*----+----* 150
            35   P  A  K  Y  Y  Q  A  I  L  E  E  N  K  E  K  L   50
msj09360   101 CTCCTGCCAAGTACTACCAGGCCATTTTGGAGGAGAACAAGGAGAAACTG 150
               | || ||| || |||||||||||||| ||||||| ||||||||||| |||
ha00521    805 CGCCCGCCGAGCACTACCAGGCCATTCTGGAGGAAAACAAGGAGAAGCTG 854
           269   P  A  E  H  Y  Q  A  I  L  E  E  N  K  E  K  L   284

           151 ----+----*----+----*----+----*----+----*----+----* 200
            51 P  L  A  I  S  P  V  A  R  P  Q  G  H  V  F  R  V  67
msj09360   151 CCGCTCGCCATTAGCCCAGTGGCACGTCCCCAGGGCCACGTCTTCAGAGT 200
               || || | ||| | ||| ||||  |  ||||| |||||| ||||||  ||
ha00521    855 CCACTTGACATCAACCCCGTGGTGCACCCCCACGGCCACATCTTCAAGGT 904
           285 P  L  D  I  N  P  V  V  H  P  H  G  H  I  F  K  V  301

           201 ----+----*----+----*----+----*----+----*----+----* 250
            68  H  C  D  V  Q  Q  V  L  G  H  L  T  H  P  R  F  T 84
msj09360   201 CCACTGCGACGTGCAGCAGGTGCTCGGCCACCTTACCCACCCTCGCTTCA 250
               | ||   |||||||||||||||  | ||  ||| |||||||| |||||||
ha00521    905 CTACACGGACGTGCAGCAGGTGGCCAGCAGCCTCACCCACCCGCGCTTCA 954
           302  Y  T  D  V  Q  Q  V  A  S  S  L  T  H  P  R  F  T 318

           251 ----+----*----+----*----+----*----+----*----+----* 300
            85   F  T  D  S  E  A  D  A  D  I  F  F  H  F  S  H   100
msj09360   251 CCTTCACTGATAGCGAGGCTGATGCCGACATCTTCTTCCACTTCTCACAC 300
               || ||||  | || ||||| || ||||||||| ||||| |||||||||||
ha00521    955 CCCTCACCCAGAGTGAGGCGGACGCCGACATCCTCTTCAACTTCTCACAC 1004
           319   L  T  Q  S  E  A  D  A  D  I  L  F  N  F  S  H   334

           301 ----+----*----+----*----+----*----+----*----+----* 350
           101 F  K  D  Y  M  K  L  S  Q  E  S  P  Q  V  L  L  N  117
msj09360   301 TTCAAGGACTACATGAAACTCAGCCAAGAGAGCCCACAGGTGCTACTCAA 350
               ||||||||||||| |||||||||||| ||||| |||   ||||| || ||
ha00521   1005 TTCAAGGACTACAGGAAACTCAGCCAGGAGAGGCCAGGCGTGCTGCTGAA 1054
           335 F  K  D  Y  R  K  L  S  Q  E  R  P  G  V  L  L  N  351

           351 ----+----*----+----*----+----*----+----*----+----* 400
           118  Q  F  P  C  E  N  L  L  T  V  K  D  C  L  A  S  I 134
msj09360   351 CCAGTTCCCCTGTGAGAATCTGCTGACTGTTAAGGACTGTCTGGCCTCCA 400
               |||||||||||| ||||| ||||||||||| |||||||| ||||||||||
ha00521   1055 CCAGTTCCCCTGCGAGAACCTGCTGACTGTCAAGGACTGCCTGGCCTCCA 1104
           352  Q  F  P  C  E  N  L  L  T  V  K  D  C  L  A  S  I 368

           401 ----+----*----+----*----+----*----+----*----+----* 450
           135   A  R  R  A  G  G  P  E  G  P  P  W  L  P  R  T   150
msj09360   401 TCGCTCGCCGGGCTGGGGGTCCTGAGGGTCCCCCCTGGCTACCCCGAACC 450
               |||| |||||||| || || || ||||| || |||||||| |||||||||
ha00521   1105 TCGCGCGCCGGGCAGGTGGCCCCGAGGGCCCACCCTGGCTGCCCCGAACC 1154
           369   A  R  R  A  G  G  P  E  G  P  P  W  L  P  R  T   384

           451 ----+----*----+----*----+----*----+----*----+----* 500
           151 F  N  L  R  T  E  L  P  Q  F  V  S  Y  F  Q  H  R  167
msj09360   451 TTCAACCTGCGCACTGAGCTGCCCCAGTTTGTCAGCTATTTCCAGCACCG 500
               |||||||||||||||||||||||||||||||||||||| |||||||| ||
ha00521   1155 TTCAACCTGCGCACTGAGCTGCCCCAGTTTGTCAGCTACTTCCAGCAGCG 1204
           385 F  N  L  R  T  E  L  P  Q  F  V  S  Y  F  Q  Q  R  401

           501 ----+----*----+----*----+----*----+----*----+----* 550
           168  E  R  R  G  E  D  N  H  W  I  C  K  P  W  N  L  A 184
msj09360   501 GGAGAGGCGGGGTGAAGACAACCACTGGATCTGCAAGCCCTGGAACCTGG 550
               ||| ||| |||| || ||||||||||||||||||||||||||||||||||
ha00521   1205 GGAAAGGTGGGGCGAGGACAACCACTGGATCTGCAAGCCCTGGAACCTGG 1254
           402  E  R  W  G  E  D  N  H  W  I  C  K  P  W  N  L  A 418

           551 ----+----*----+----*----+----*----+----*----+----* 600
           185   R  S  L  D  T  H  V  T  N  N  L  H  S  I  I  R   200
msj09360   551 CCCGCAGCCTGGACACTCACGTCACCAACAACCTCCACAGTATCATTCGG 600
               | |||||||||||||| ||||||||||| | ||| ||||| ||||| |||
ha00521   1255 CGCGCAGCCTGGACACCCACGTCACCAAGAGCCTGCACAGCATCATCCGG 1304
           419   R  S  L  D  T  H  V  T  K  S  L  H  S  I  I  R   434

           601 ----+----*----+----*----+----*----+----*----+----* 650
           201 H  R  E  S  T  P  K  V  V  S  K  Y  I  E  S  P  V  217
msj09360   601 CACCGAGAGAGCACCCCCAAGGTTGTGTCCAAGTACATCGAAAGTCCCGT 650
               ||||||||||||||||||||||||||||||||||||||||||||||||||
ha00521   1305 CACCGAGAGAGCACCCCCAAGGTTGTGTCCAAGTACATCGAAAGTCCCGT 1354
           435 H  R  E  S  T  P  K  V  V  S  K  Y  I  E  S  P  V  451

           651 ----+----*----+----*----+----*----+----*----+----* 700
           218  L  F  L  R  E  D  V  G  N  V  K  F  D  I  R  Y  I 234
msj09360   651 CTTGTTCCTCCGAGAAGATGTGGGGAACGTCAAGTTTGACATCCGCTACA 700
                |||||||| |||||||| ||||| || |||||||| |||||||||||||
ha00521   1355 GTTGTTCCTTCGAGAAGACGTGGGAAAGGTCAAGTTCGACATCCGCTACA 1404
           452  L  F  L  R  E  D  V  G  K  V  K  F  D  I  R  Y  I 468

           701 ----+----*----+----*----+----*----+----*----+----* 750
           235   V  L  L  R  S  V  R  P  L  R  L  F  A  Y  D  V   250
msj09360   701 TTGTGCTGCTGCGCTCAGTGAGGCCGCTGAGGTTGTTTGCTTACGATGTG 750
               | ||||||||||| ||||||||||| ||  ||||||| |  || ||||||
ha00521   1405 TCGTGCTGCTGCGGTCAGTGAGGCCCCTACGGTTGTTCGTGTATGATGTG 1454
           469   V  L  L  R  S  V  R  P  L  R  L  F  V  Y  D  V   484

           751 ----+----*----+----*----+----*----+----*----+----* 800
           251 F  W  L  R  F  S  N  R  P  F  A  L  D  D  L  D  D  267
msj09360   751 TTTTGGCTACGCTTCTCCAATCGGCCCTTCGCCCTCGATGACCTAGACGA 800
               || ||||| || |||||||| ||| |||| || ||| | ||||| || ||
ha00521   1455 TTCTGGCTGCGGTTCTCCAACCGGGCCTTTGCACTCAACGACCTGGATGA 1504
           485 F  W  L  R  F  S  N  R  A  F  A  L  N  D  L  D  D  501

           801 ----+----*----+----*----+----*----+----*----+----* 850
           268  Y  E  K  H  F  T  V  M  N  Y  D  P  D  V  V  L  K 284
msj09360   801 CTATGAGAAGCATTTCACCGTCATGAACTATGACCCGGATGTGGTGCTGA 850
               ||| |||||||| ||||| |||||||||||||||||||||||||||||||
ha00521   1505 CTACGAGAAGCACTTCACGGTCATGAACTATGACCCGGATGTGGTGCTGA 1554
           502  Y  E  K  H  F  T  V  M  N  Y  D  P  D  V  V  L  K 518

           851 ----+----*----+----*----+----*----+----*----+----* 900
           285   Q  V  H  Y  N  E  F  I  P  Q  F  E  K  Q  Y  P   300
msj09360   851 AGCAGGTGCACTATAATGAGTTCATCCCTCAGTTTGAGAAGCAGTACCCA 900
               |||||||||||| | | |||||||||||  ||||||||||||| ||||||
ha00521   1555 AGCAGGTGCACTGTGAAGAGTTCATCCCCGAGTTTGAGAAGCAATACCCA 1604
           519   Q  V  H  C  E  E  F  I  P  E  F  E  K  Q  Y  P   534

           901 ----+----*----+----*----+----*----+----*----+----* 950
           301 E  F  P  W  S  D  V  Q  A  E  I  F  K  A  F  T  E  317
msj09360   901 GAGTTTCCCTGGAGTGATGTTCAGGCTGAGATCTTCAAGGCCTTCACGGA 950
               || ||||||||||  || || |||||||||||||||  ||||||||||||
ha00521   1605 GAATTTCCCTGGACGGACGTCCAGGCTGAGATCTTCCGGGCCTTCACGGA 1654
           535 E  F  P  W  T  D  V  Q  A  E  I  F  R  A  F  T  E  551

           951 ----+----*----+----*----+----*----+----*----+----* 1000
           318  L  F  Q  V  A  C  A  K  P  P  P  M  G  L  C  D  Y 334
msj09360   951 GCTGTTCCAAGTGGCATGTGCCAAGCCACCGCCCATGGGCCTCTGTGACT 1000
               ||||||||| ||||| |||||||||||||| ||| |||||||||| ||||
ha00521   1655 GCTGTTCCAGGTGGCCTGTGCCAAGCCACCACCCCTGGGCCTCTGCGACT 1704
           552  L  F  Q  V  A  C  A  K  P  P  P  L  G  L  C  D  Y 568

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
           335   P  S  S  R  A  M  Y  A  I  D  L  M  L  N  W  D   350
msj09360  1001 ACCCCTCATCCCGGGCCATGTATGCCATTGATCTCATGCTCAACTGGGAC 1050
               |||||||||||||||||||||||||| | || |||||||| || ||||||
ha00521   1705 ACCCCTCATCCCGGGCCATGTATGCCGTCGACCTCATGCTGAAGTGGGAC 1754
           569   P  S  S  R  A  M  Y  A  V  D  L  M  L  K  W  D   584

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
           351 N  H  P  D  G  K  R  V  M  Q  P  Q  I  L  E  V  N  367
msj09360  1051 AACCACCCAGATGGAAAGCGGGTGATGCAGCCCCAAATCCTGGAGGTGAA 1100
               |||  ||||||||||| ||||||||||||||| || ||||||||||||||
ha00521   1755 AACGGCCCAGATGGAAGGCGGGTGATGCAGCCGCAGATCCTGGAGGTGAA 1804
           585 N  G  P  D  G  R  R  V  M  Q  P  Q  I  L  E  V  N  601

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
           368  F  N  P  D  C  E  R  A  C  R  Y  H  P  S  F  F  N 384
msj09360  1101 CTTCAACCCCGACTGCGAGCGAGCCTGCAGATACCACCCCTCATTCTTCA 1150
               ||||||||||||||| |||||||||||||| ||||||||| | |||||||
ha00521   1805 CTTCAACCCCGACTGTGAGCGAGCCTGCAGGTACCACCCCACCTTCTTCA 1854
           602  F  N  P  D  C  E  R  A  C  R  Y  H  P  T  F  F  N 618

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
           385   D  V  F  S  T  L  F  L  D  E  T  D  N  C  H  V   400
msj09360  1151 ATGATGTCTTCAGCACTTTGTTTCTGGACGAGACTGACAACTGCCATGTC 1200
               | || ||||||||||| |||||||||||| || | |    |||||| || 
ha00521   1855 ACGACGTCTTCAGCACCTTGTTTCTGGACCAGCCCGGTGGCTGCCACGTT 1904
           619   D  V  F  S  T  L  F  L  D  Q  P  G  G  C  H  V   634

          1201 ----+----*----+ 1215
           401 T  R  I  I  *   405
msj09360  1201 ACCCGCATCATCTAG 1215
               ||| || |  |||||
ha00521   1905 ACCTGCCTTGTCTAG 1919
           635 T  C  L  V  *   639


*--[ 3'UTR ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
msj09360  1216 GTGCCCAGAGTTCTGCCTGTTCTCATAGCCAGTTCCAGCCGGTTCCAGCC 1265
                        |  ||  |||| | || | || ||       | ||   || 
ha00521   1920 .........GCACTCGCTGTCCCCAAAACCTGT.......GCTTGGGGCA 1953

            51 ----+----*----+----*----+----*----+----*----+----* 100
msj09360  1266 GG..TCCAGCCTCTGCTCACAGAACTGCCTTTGCAGTCCCAGGCTTCTCC 1313
               ||  |||| |||| | || | || |||| | ||||    |   | | |||
ha00521   1954 GGATTCCAACCTCAGTTCTCTGAGCTGCTTCTGCAAAGGCCCCCATGTCC 2003

           101 ----+----*----+----*----+----*----+----*----+----* 150
msj09360  1314 CTCCCTCCCTCTCTCCCCTCCTTCCTTCCTCAGCCAGAGCCTTGGCCTAA 1363
               |||||  |  |   ||    | |     |    ||||  |  || |||  
ha00521   2004 CTCCCCACACCGGCCCTGGGCATAGCCTCAGCCCCAGGCCTCTGTCCT.. 2051

           151 ----+----*----+----*----+----*----+----*----+----* 200
msj09360  1364 GTTATACTCAACCCTCCTGAGCCGTGTTCCTGCTCCATATGTGGGATATC 1413
                    |  || ||  || | |||    ||| |   || |         ||
ha00521   2052 .GCCGAGCCATCCTCCCGGCGCCACACTCCGGGAGCACAGCATCCTCCTC 2100

           201 ----+----*----+----*----+----*----+----*----+----* 250
msj09360  1414 AGGTCCATGTGTGGCAGAGCTGGACAGTGAGTGGTGTCCCAAGGACTGGG 1463
                    | |||| | |||||| ||||||||| ||||||||| ||| ||| |
ha00521   2101 ..TCACCTGTGGGTCAGAGCAGGACAGTGA.TGGTGTCCCCAGGGCTGAG 2147

           251 ----+----*----+----*----+----*----+----*----+----* 300
msj09360  1464 CTCCGACCAGCTGTACCTGGTCTCTGTACCTCTTAACGCCCTCTCTTCTC 1513
               | ||  ||  |    ||||  |||   ||| || | | || ||| | | |
ha00521   2148 CACCACCC..CACGCCCTGCCCTC...ACCCCTCACCACCATCTGTGCAC 2192

           301 ----+----*----+----*----+----*----+----*----+----* 350
msj09360  1514 TGAAGAGTCTGCAGCTCAGCTAAGGGCTTTTCTCCTGGCATCCAGAA... 1560
               ||| |||||| ||| | ||| ||||||||   |||||||||  ||||   
ha00521   2193 TGATGAGTCTCCAGTTTAGCCAAGGGCTTCGTTCCTGGCATGGAGAATTT 2242

           351 ----+----*----+----*----+----*----+----*----+----* 400
msj09360  1561 ........................................AGTTCGCAGA 1570
                                                         | ||  ||
ha00521   2243 GTTCCTGGCTGCTGTGTTTCCAGGGGGTGCTGGGGGAAGGGTTCCGTGGA 2292

           401 ----+----*----+----*----+----*----+----*----+----* 450
msj09360  1571 CCAAGAAATG..TTCTGCAGAAACAGGGTTCGACGAGGGAAGTGTTTGGG 1618
                | ||| | |   ||  | | | |||||||| ||  |||||| |||||||
ha00521   2293 GCGAGACAAGGTGTCCTCGGGAGCAGGGTTCCAC.CGGGAAGCGTTTGGG 2341

           451 ----+----*----+----*----+----*----+----*----+----* 500
msj09360  1619 AACCCGGTATCCACAAGGGCCAGGGAGTACTCT....CAGAATCTCTGCC 1664
               | ||| |||| |||| ||| ||||  |   |||    | |  ||||||| 
ha00521   2342 AGCCCTGTAT.CACACGGGGCAGGCGGGTTTCTCTTCCGGGGTCTCTGCT 2390

           501 ----+----*----+----*----+----*----+----*----+----* 550
msj09360  1665 CTCCTGTCCCATGGCTGCTGCAAGCAGGGTACGGGAACCCTGTGTTGCAC 1714
               ||  ||   || | |  |  |  |  || |  |||  |||     |||||
ha00521   2391 CTTATGCATCAGGACGACCCCGGGACGGCTGTGGG.GCCCCACACTGCAC 2439

           551 ----+----*----+----*----+----*----+----*----+----* 600
msj09360  1715 CCACA.................GGCCCCAGAACAGCCAAGGGGAAACATT 1747
               |||||                 |||||  ||||||||   ||  | ||  
ha00521   2440 CCACAGGGCTCTATGCGACAGGGGCCCAGGAACAGCCTGAGGCCACCACC 2489

           601 ----+----*----+----*----+----*----+----*----+----* 650
msj09360  1748 TGCCAACCCGGCCTTAT.GCCTCGGCATCCTCCGCCAGAGCCTTCACCAG 1796
                  ||| || |||||||  ||    |   |||  ||||| ||||||||||
ha00521   2490 CAGCAAGCCCGCCTTATCACCCATTCCAGCTCACCCAGAACCTTCACCAG 2539

           651 ----+----*----+----*----+----*----+----*----+----* 700
msj09360  1797 CAGACTTCTCAGCCATGCCTACCCTGGGTGTTTCCCTTCTGGGAAGCTGG 1846
               || || ||      | | |    | ||  |   || |  ||  |   |  
ha00521   2540 CAAACCTCCTGCTGAGGTCCTGGCAGGAGGCCACCGTCTTGTTACCGTTT 2589

           701 ----+----*----+----*----+----*----+----*----+----* 750
msj09360  1847 GCTATGCAGAGTCCCATGGTCTCTG......................... 1871
                || | |     |  | |||| | |                         
ha00521   2590 CCTTTTCGTTTGCTGAGGGTCACAGACCCCAACAGGGAAATCAGTATCTG 2639

           751 ----+----*----+----*----+----*----+----*----+----* 800
msj09360  1872 .....................CATGTTGGTACCTCACCAAGTCCCACTGT 1900
                                          || ||  |||   ||||| |  |
ha00521   2640 TCTTCCCAGTGGTTGCCCTGCTCGCCGGGCACTCCACGGGGTCCCGCCCT 2689

           801 ----+----*----+----*----+----*----+----*----+----* 850
msj09360  1901 GCTCTTGTGGTAGACAGGGT......GCTAGGTTGCTCTAGGGCTGTGAC 1944
                 | |       | |||| |      || |||     || |||||| | |
ha00521   2690 TGTGTGAGATGGGCCAGGATCCTTCGGCAAGGGGCGCCTGGGGCTGGGGC 2739

           851 ----+----*----+----*----+----*----+----*----+----* 900
msj09360  1945 ATTTCATGGCAGAATCCAAGCAGGA......................... 1969
                  |  |||  |       ||  ||                         
ha00521   2740 TGATTGTGGGCGGTGGAGCGCCAGACAGAAAAGGATTCCAATGAGCCCCA 2789

           901 ----+----*----+----*----+----*----+----*----+----* 950
msj09360  1970 .............................................GTGGC 1974
                                                            |||| 
ha00521   2790 GCCCCAGGCGCCCCTTGCCGAAGGATCCTGGGGCTGGGGCTGATTGTGGG 2839

           951 ----+----*----+----*----+----*----+----*----+----* 1000
msj09360  1975 TGTGGAAATGCCAGAGCGGCTAAGATGGCTCTGGAGAGAACTTCATGTGG 2024
                |  | |  ||||||  |   || | |  ||    |||||||||| ||  
ha00521   2840 CGGTGGAGCGCCAGACAG...AAAAGGATTCCAATGAGAACTTCAGGTTA 2886

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
msj09360  2025 GAATCAGGCTGCCTCTTGCCAAAGTTCAGAGTCCTAGTGTTAAGGTTTTG 2074
                | ||| | |||| | | |||  ||  | ||||  | ||||    |||| 
ha00521   2887 AAGTCA.GATGCCACCTACCAGGGTCTACAGTCAAAATGTTGGCTTTTT. 2934

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
msj09360  2075 GGTTTGGTTTTCCTTCAACCTGCAGGAAAGACAATGTTACGTGGAGTTCC 2124
                  ||  ||||   |  |   |    |||   ||  || |      || |
ha00521   2935 ..CTTATTTTTTAATGTATGGGAGAAAAATGTAAAATTCCAGTTCTTTTC 2982

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
msj09360  2125 TAATTTTGTTGCTGGAATTTGAAGTCAGCCACCA..TTGCTTCTGTAACT 2172
               ||||| |||| ||| |||| | |||||||  |||   |  || |||  ||
ha00521   2983 TAATTGTGTTTCTGAAATTAGGAGTCAGCTGCCAGCGTTTTTGTGTGGCT 3032

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
msj09360  2173 GCTGGGCGCTGGGATCCTGCCCCCAGGAAGT...............TAAG 2207
               || | | ||  ||  || || | | || |||                   
ha00521   3033 GCAGTGTGCCTGGGCCCAGCTCACGGGCAGTGGGTGGACCTAACTGCCCA 3082

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
msj09360  2208 AGTGGGCAGGAGCTCCTTCCAGA.TGTCCTACTGTTCGGGTGGG...... 2250
                |  |||  ||||| ||||||||   | | | ||   ||| |||      
ha00521   3083 GGCAGGCGAGAGCTACTTCCAGAGCCTTCCAGTGCATGGGAGGGCAGGGC 3132

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
msj09360  2251 ACACTGTGGTGGCTGTTGTACTTGTGAAGGTAAAAGTGACCTTCTCTTAG 2300
                   ||| | ||    |   |||   ||   | || |  | ||||  |||
ha00521   3133 TAGGTGTAGCGGTGTCTCCTCTTTGAAATTAAGAACTATCTTTCTTGTAG 3182

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
msj09360  2301 CATG.............................................. 2304
               ||                                                
ha00521   3183 CAAAGCTGCACCTGATGATGCTGCCTCTCCTCTCTGTGTTGTCTGGGCCC 3232

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
msj09360  2304 .................................................. 2304
                                                                 
ha00521   3233 TTGTTTACAAGCACGCGTTACCCTTCCTGAGGGGAGCCATGCTCTAGCCC 3282

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
msj09360  2304 .................................................. 2304
                                                                 
ha00521   3283 CTGGAGGGCCTGTTGCAGGGGCAGGGCGGGCCCGTCGCCTTTGGCAGCTC 3332

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
msj09360  2304 .................................................. 2304
                                                                 
ha00521   3333 CTGGAGAGCTGTGGACATGCAGTCCCCCTCAGTTCGTGCTGCAATAAAGG 3382

          1501 ----+----*-- 1512
msj09360  2304 ............ 2304
                           
ha00521   3383 CCATCTTCTCTT 3394