Comparison of KIAA cDNA sequences between mouse and human (FLJ00209)
<<Original sequence data>>
mouse mFLJ00209 (msj09154) length: 2554 bp, CDS: 1 - 2442
human (sj05025) length: 3975 bp, CDS: 949 - 2025
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 73 - 949 658 136 17.1
CDS: 950 - 2069 862 216 20.0
3'UTR: 2070 - 4019 482 154 24.2
amino acid
CDS: 950 - 2069 278 81 22.6
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msj09154 1 .................................................. 1
sj05025 1 GCCCCGCCCCTTTGGGCTGGAACCGGAGGTGTCGCTCTTCGGACCTCAAG 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msj09154 1 ......................CAGCAGTCCCTCGCGGAAGGC..TCCGG 26
| ||||| | |||||||| || || ||
sj05025 51 GTTCCCCTTAACACAGAGCGCCCCGCAGT.CTTCGCGGAAAGCGTTCGGG 99
101 ----+----*----+----*----+----*----+----*----+----* 150
msj09154 27 GAGAGCGATGGCGGCTACGCGTGTACAGCCCAGTACCCGGGAGATTTTCA 76
| |||||||| || ||||||| | |||| | |||| ||||| ||||
sj05025 100 GTAGGCGATGGCTGCGACGCGTGCAGGGCCCCGCGCCCGCGAGATCTTCA 149
151 ----+----*----+----*----+----*----+----*----+----* 200
msj09154 77 CGACGCTGGAGTACGGACCGGTGCCGGAGAGCCACGCATGCGCACTGGCC 126
| |||||||||||||||||||||||||||||||||||||||||||||||
sj05025 150 CCTCGCTGGAGTACGGACCGGTGCCGGAGAGCCACGCATGCGCACTGGCC 199
201 ----+----*----+----*----+----*----+----*----+----* 250
msj09154 127 TGGCTGGACACCCACAACCGCCTCTTGGGCCACCATGTCAATGGGATGTG 176
|||||||||||||| |||| |||||||||| |||| ||||||| |||
sj05025 200 TGGCTGGACACCCAGGACCGGTGCTTGGGCCACTATGTGAATGGGAAGTG 249
251 ----+----*----+----*----+----*----+----*----+----* 300
msj09154 177 GCTGAAGCCAGAACACAGGAATCCAGCGCCTTGCCAGGATCCCATCACAG 226
| | ||||| |||||||| ||| ||| |||||||||||||||||||||||
sj05025 250 GTTAAAGCCTGAACACAGAAATTCAGTGCCTTGCCAGGATCCCATCACAG 299
301 ----+----*----+----*----+----*----+----*----+----* 350
msj09154 227 GAGAAAACCTGGCCAGCTGCTTGCAAGCAGAGGCTGAGGACATCGCTGCA 276
|||| ||| ||||||| ||| |||| ||| |||| ||||| | ||||||
sj05025 300 GAGAGAACTTGGCCAGTTGCCTGCAGGCACAGGCCGAGGATGTGGCTGCA 349
351 ----+----*----+----*----+----*----+----*----+----* 400
msj09154 277 GCTGTGGAGGCTGCAAAGATAGCATTCAAGGCCTGGAGCCAACTCCCTGG 326
|| |||||||| || | ||| ||||| |||| |||||| | ||| ||
sj05025 350 GCCGTGGAGGCAGCCAGGATGGCATTTAAGGGCTGGAGTGCGCACCCCGG 399
401 ----+----*----+----*----+----*----+----*----+----* 450
msj09154 327 AGCTGCTCGGGGACAACACCTAACCCGGCTGGCCAAGGTCGTTCAGAAGC 376
| | |||| || ||||| ||| |||||||| |||| | |||||||
sj05025 400 CGTCGTCCGGGCCCAGCACCTGACCAGGCTGGCCGAGGTGATCCAGAAGC 449
451 ----+----*----+----*----+----*----+----*----+----* 500
msj09154 377 ACCAGCGACTGCTGTGGACCCTGGAATCCCTGGTCACTGGACGGGCTGTT 426
||||||| |||||||||||||||||||||||||| ||||| |||||||||
sj05025 450 ACCAGCGGCTGCTGTGGACCCTGGAATCCCTGGTGACTGGGCGGGCTGTT 499
501 ----+----*----+----*----+----*----+----*----+----* 550
msj09154 427 CGAGAGGTTCGAGATGGAGATGTGCCACTGGCCCAGCAACTGCTCCAGTA 476
|||||||||||||| || || || | ||||||||||| |||||||| ||
sj05025 500 CGAGAGGTTCGAGACGGGGACGTCCAGCTGGCCCAGCAGCTGCTCCACTA 549
551 ----+----*----+----*----+----*----+----*----+----* 600
msj09154 477 CCATGCAGTCCAGGCACATGCCCAGGGTGACGCACTGGCAGACTGGCAGC 526
||||||| |||||||| |||||| || |||||||||| |||| |||
sj05025 550 CCATGCAATCCAGGCATCCACCCAGGAGGAGGCACTGGCAGGCTGGGAGC 599
601 ----+----*----+----*----+----*----+----*----+----* 650
msj09154 527 CCATGGGAGTCATTGGCCTCATCCTGCCGACTCCTTTCTCTTTCTTGGAC 576
|||||||||| ||||||||||||||||| | | ||||| ||| | ||
sj05025 600 CCATGGGAGTAATTGGCCTCATCCTGCCACCCACATTCTCCTTCCTTGAG 649
651 ----+----*----+----*----+----*----+----*----+----* 700
msj09154 577 ATGATGTGGAGGATCTGCCCTGCCTTGGCTATGGGCTGCACCGTGGTGGC 626
|||||||||||||| ||||||||| ||||| |||||||||||||||||||
sj05025 650 ATGATGTGGAGGATTTGCCCTGCCCTGGCTGTGGGCTGCACCGTGGTGGC 699
701 ----+----*----+----*----+----*----+----*----+----* 750
msj09154 627 CCTCGTGCCCCCAGCCTTCCCGACACCTCTCCTCCTGGCTCAGCTGGCAG 676
|||||||||||| |||| |||| | || ||||||||||| |||||||| |
sj05025 700 CCTCGTGCCCCCGGCCTCCCCGGCGCCCCTCCTCCTGGCCCAGCTGGCGG 749
751 ----+----*----+----*----+----*----+----*----+----* 800
msj09154 677 GAGAGCTTGGCTCTTTCCCAGGGATCCTCAATGTGGTATGTGGCCCTGCC 726
| ||||| ||| | ||||| || ||||| ||||| || ||||||||||
sj05025 750 GGGAGCTGGGCCCCTTCCCGGGAATCCTGAATGTCGTCAGTGGCCCTGCG 799
801 ----+----*----+----*----+----*----+----*----+----* 850
msj09154 727 TCGCTGGGGCCTGTCCTGGCCTCCCAACCTGGAGTCCAGAAGGTGGCTTT 776
|| |||| ||| ||||||||||||| |||||| ||| ||||||||| ||
sj05025 800 TCCCTGGTGCCCATCCTGGCCTCCCAGCCTGGAATCCGGAAGGTGGCCTT 849
851 ----+----*----+----*----+----*----+----*----+----* 900
msj09154 777 CTGTGGAGCCGTGG.................................... 790
||| |||||| ||
sj05025 850 CTGCGGAGCCCCGGAGGTACCTTCGGGACAGGGGTCGTGGCGGAACGCGG 899
901 ----+----*----+----*----+----*----+----*----+----* 950
E
msj09154 791 ...............................................AGG 793
|||
sj05025 900 CTGGGGGCCGCAAGGCTCCTCCTGCGGCTGAACTGGGGGGGGTCCCTAGG 949
E
951 ----+----*----+----*----+----*----+----*----+----* 1000
G R V L R R T L A G R G A E L G
msj09154 794 AAGGACGTGTTCTGCGACGGACTCTAGCAGGCAGGGGAGCTGAGCTGGGC 843
|||| |||| || ||||||| || || || | | || |||||||||
sj05025 950 AAGGGCGTGCCCTTCGACGGAGCCTGGCGGGAGAGTGTGCGGAGCTGGGC 999
G R A L R R S L A G E C A E L G
1001 ----+----*----+----*----+----*----+----*----+----* 1050
L A L G T E S L L L L T D S A D V
msj09154 844 CTGGCCCTGGGCACAGAGTCACTGTTGCTATTGACGGACTCCGCAGATGT 893
||||| ||||| || ||||| ||| |||| |||||||| | || || ||
sj05025 1000 CTGGCGCTGGGGACGGAGTCGCTGCTGCTGCTGACGGACACGGCGGACGT 1049
L A L G T E S L L L L T D T A D V
1051 ----+----*----+----*----+----*----+----*----+----* 1100
D S A V E G V V D A V W S D R S L
msj09154 894 GGACTCAGCTGTGGAGGGTGTCGTGGATGCCGTCTGGTCAGACCGCAGCC 943
||||| || ||||||||||||||||| |||| |||||| |||||| |||
sj05025 1050 AGACTCGGCCGTGGAGGGTGTCGTGGACGCCGCCTGGTCCGACCGCGGCC 1099
D S A V E G V V D A A W S D R G P
1101 ----+----*----+----*----+----*----+----*----+----* 1150
G G L R L L I Q E S V W D E A M
msj09154 944 TGGGGGGGCTCAGGCTCCTCATCCAGGAATCTGTATGGGATGAAGCTATG 993
||| || |||||||||||||||||||| ||||| ||||||||||| |||
sj05025 1100 CGGGTGGCCTCAGGCTCCTCATCCAGGAGTCTGTGTGGGATGAAGCCATG 1149
G G L R L L I Q E S V W D E A M
1151 ----+----*----+----*----+----*----+----*----+----* 1200
R R L Q A R M A Q I R S G R G L D
msj09154 994 AGGCGACTCCAGGCCAGAATGGCACAGATACGGAGTGGGAGAGGACTGGA 1043
|| || || |||| | |||| | | | |||||||| |||| |||||
sj05025 1150 AGACGGCTGCAGGAGCGGATGGGGCGGCTTCGGAGTGGCCGAGGGCTGGA 1199
R R L Q E R M G R L R S G R G L D
1201 ----+----*----+----*----+----*----+----*----+----* 1250
G A V D M G A R G A A A R D L A Q
msj09154 1044 TGGGGCTGTGGACATGGGGGCTCGAGGAGCTGCTGCCCGAGACCTGGCCC 1093
|||||| |||||||||||||| || || ||||| || | ||||||| ||
sj05025 1200 TGGGGCCGTGGACATGGGGGCCCGGGGGGCTGCCGCATGTGACCTGGTCC 1249
G A V D M G A R G A A A C D L V Q
1251 ----+----*----+----*----+----*----+----*----+----* 1300
S F V D E A Q S Q G G Q V F Q A
msj09154 1094 AGAGCTTTGTGGATGAGGCCCAAAGCCAAGGGGGACAGGTATTCCAAGCT 1143
|| |||||||| ||||||||| ||||| || | |||||| ||||| |||
sj05025 1250 AGCGCTTTGTGCGTGAGGCCCAGAGCCAGGGTGCACAGGTGTTCCAGGCT 1299
R F V R E A Q S Q G A Q V F Q A
1301 ----+----*----+----*----+----*----+----*----+----* 1350
G D V P S S S P F F S P A L V S G
msj09154 1144 GGTGATGTGCCCTCCAGTAGCCCATTTTTCTCTCCAGCCTTGGTTTCTGG 1193
||||||||||| || ||||||| | | ||| ||||||| ||
sj05025 1300 GGTGATGTGCCTTCGGAACGCCCATTCTATCCCCCAACCTTGGTCTCCAA 1349
G D V P S E R P F Y P P T L V S N
1351 ----+----*----+----*----+----*----+----*----+----* 1400
L P P A A P C A Q A E V P W P V V
msj09154 1194 TCTGCCTCCAGCAGCCCCATGTGCCCAGGCCGAGGTACCGTGGCCTGTGG 1243
||||| ||||| ||||||||||||||| ||||| |||||||||||||
sj05025 1350 CCTGCCCCCAGCCTCCCCATGTGCCCAGGTGGAGGTGCCGTGGCCTGTGG 1399
L P P A S P C A Q V E V P W P V V
1401 ----+----*----+----*----+----*----+----*----+----* 1450
M A S P F R T V K E A L A L A N
msj09154 1244 TTATGGCTTCTCCTTTCCGCACAGTCAAGGAGGCACTAGCCCTGGCCAAT 1293
| |||| || || |||||||||| |||||||||||| |||||||
sj05025 1400 TCGTGGCCTCCCCCTTCCGCACAGCCAAGGAGGCACTGTTGGTGGCCAAC 1449
V A S P F R T A K E A L L V A N
1451 ----+----*----+----*----+----*----+----*----+----* 1500
G T P R G G S A S V W S E R L G Q
msj09154 1294 GGAACACCCCGGGGAGGCAGCGCCAGCGTGTGGAGTGAAAGGCTAGGGCA 1343
|| || ||||| || ||||||||||| |||||||| || ||||| |||||
sj05025 1450 GGGACGCCCCGCGGGGGCAGCGCCAGTGTGTGGAGCGAGAGGCTGGGGCA 1499
G T P R G G S A S V W S E R L G Q
1501 ----+----*----+----*----+----*----+----*----+----* 1550
A L E L G Y G L Q V G T V W I N A
msj09154 1344 AGCCCTGGAGCTGGGCTATGGGCTCCAGGTGGGCACAGTGTGGATCAATG 1393
|| |||||||||||||||||||||||||||||||| || |||||||| |
sj05025 1500 GGCGCTGGAGCTGGGCTATGGGCTCCAGGTGGGCACTGTCTGGATCAACG 1549
A L E L G Y G L Q V G T V W I N A
1551 ----+----*----+----*----+----*----+----*----+----* 1600
H G L R D P A V P T G G C K E S
msj09154 1394 CTCATGGCCTCCGAGACCCTGCGGTGCCGACAGGGGGCTGCAAGGAGAGT 1443
| || |||||| |||||||| ||||||| ||||| |||||||||||||||
sj05025 1550 CCCACGGCCTCAGAGACCCTTCGGTGCCCACAGGCGGCTGCAAGGAGAGT 1599
H G L R D P S V P T G G C K E S
1601 ----+----*----+----*----+----*----+----*----+----* 1650
G S S W H G G P D G L Y E Y L Q P
msj09154 1444 GGGTCTTCCTGGCACGGAGGCCCAGATGGCCTGTATGAGTACCTGCAGCC 1493
|||| |||||||||||| |||||||| || ||||||||||| |||| |||
sj05025 1600 GGGTGTTCCTGGCACGGGGGCCCAGACGGGCTGTATGAGTATCTGCGGCC 1649
G C S W H G G P D G L Y E Y L R P
1651 ----+----*----+----*----+----*----+----*----+----* 1700
L G T P S Q E S F L C E N I N Y D
msj09154 1494 CTTGGGGACACCTTCCCAGGAGTCCTTCCTTTGTGAGAATATCAACTATG 1543
|| ||||| ||| ||| | ||||| ||| | |||| | |||||||
sj05025 1650 CTCAGGGACCCCTGCCCGGCTGTCCTGCCTCTCCAAGAACCTGAACTATG 1699
S G T P A R L S C L S K N L N Y D
1701 ----+----*----+----*----+----*----+----*----+----* 1750
T F G L A A S S I L P S G P E T
msj09154 1544 ACACATTTGGCCTTGCTGCGTCCTCCATTCTGCCGTCAGGGCCAGAAACA 1593
|||| |||||||| |||| | |||| | |||||| | ||||| |||| |
sj05025 1700 ACACCTTTGGCCTCGCTGTGCCCTCAACCCTGCCGGCTGGGCCTGAAATA 1749
T F G L A V P S T L P A G P E I
1751 ----+----*----+----*----+----*----+----*----+----* 1800
G P S
msj09154 1594 GGGCCTAGCCCAGCCCCTCCCTATGGGCTGTTTGTCGGAGGCCGTTTCCA 1643
|||| |||
sj05025 1750 GGGC...........................................CCA 1756
G P R
1801 ----+----*----+----*----+----*----+----*----+----* 1850
L L G P R A P G P S K I L R A K
msj09154 1644 GTCTCCTGGGACCCAGAGCTCCAGGCCCATCCAAGATTCTTCGGGCAAAG 1693
| |||||||| ||| |||||||||||||||| ||||| || |||||
sj05025 1757 GGCTCCTGGGGCCCGAAGCTCCAGGCCCATCCGGGATTCGTCTGGCAATC 1806
L L G P E A P G P S G I R L A I
1851 ----+----*----+----*----+----*----+----*----+----* 1900
S P A M * L R V E P R I S E V L *
msj09154 1694 TCTCCAGCTATGTAGCTGAGGGTGGAGCCAAGGATATCCGAGGTGCTGTA 1743
|| |||| || |||||||||||||||||||| ||||||||||||||
sj05025 1807 TCCATGGCTACGTGGCTGAGGGTGGAGCCAAGGACATCCGAGGTGCTGTG 1856
S M A T W L R V E P R T S E V L W
1901 ----+----*----+----*----+----*----+----*----+----* 1950
R L L I R L P L A G E P S P Q E P
msj09154 1744 GAGGCTGCTCATCAGGCTGCCCCTGGCTGGGGAGCCCAGTCCCCAAGAGC 1793
||||| ||||| |||||| ||||||||||| | |||||||||| ||||
sj05025 1857 GAGGCCGCTCACCAGGCTTTCCCTGGCTGGGCGGGCCAGTCCCCAGGAGC 1906
R P L T R L S L A G R A S P Q E P
1951 ----+----*----+----*----+----*----+----*----+----* 2000
E Q A C C G P W R L L W S A G S
msj09154 1794 CCGAGCAGGCCTGCTGTGGGCCCTGGCGGCTGCTCTGGAGCGCAGGAAGC 1843
||| |||| |||||||||||||||||||||||| ||||||||| |||||
sj05025 1907 CCGGGCAGCCCTGCTGTGGGCCCTGGCGGCTGCACTGGAGCGCCGGAAGT 1956
G Q P C C G P W R L H W S A G S
2001 ----+----*----+----*----+----*----+----*----+----* 2050
Q C * P H N * K G T E Q R L Q L P
msj09154 1844 CAGTGCTGACCTCACAACTAGAAAGGCACGGAGCAGCGCCTACAGTTGCC 1893
| ||| |||| || || ||||| ||||| | || | | |||
sj05025 1957 CTACCCTGGCCTCGAGGCTGGAGAGGCAGGGAGCGGAGCTCAAGGCTGCG 2006
L P W P R G W R G R E R S S R L R
2051 ----+----*----+----*----+----*----+----*----+----* 2100
R L K * N *
msj09154 1894 AAGATTGAAGTAGAACTGAGTGTGAGGCGACTCCAGACATGGGGCACCCG 1943
|| || || || ||||| | || ||||| | | | ||||| ||||
sj05025 2007 GAGGCGGAGGTGGAGCTGAGCGCAAGACGACTTCGGGCGTGGGGGGCCCG 2056
R R R W S *
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msj09154 1944 GGTTCAGGACCAAGGCCAGACACTACAGGTAACAGGATTGAGAGGCCCTG 1993
||| |||| ||||||||| || || |||||| | || ||||||||||||
sj05025 2057 GGTGCAGGCCCAAGGCCACACCCTGCAGGTAGCCGGGCTGAGAGGCCCTG 2106
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msj09154 1994 TGCTCCGGCTTCGAGAACCATTGGGAGTGCTGGCCGTGGTGTGCCCGGAT 2043
|||| || || || || || |||| |||||||| |||||||| |||||
sj05025 2107 TGCTGCGCCTGCGGGAGCCGCTGGGTGTGCTGGCTGTGGTGTGTCCGGAC 2156
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msj09154 2044 GAGTGGCCCCTGCTGGCTTTTGTGTCACTACTGGCCCCTGCACTGGCCCA 2093
|||||||||||||| || || ||||| || ||||| || || |||||| |
sj05025 2157 GAGTGGCCCCTGCTTGCCTTCGTGTCCCTGCTGGCTCCCGCCCTGGCCTA 2206
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msj09154 2094 TGGCAATGCCGTGGTCTTAGTACCCAGTGGGGCATGTCCTCTGCTGGCCT 2143
||||| | |||||| | || ||||||| ||| |||||||||||||||
sj05025 2207 CGGCAACACTGTGGTCATGGTGCCCAGTGCGGCCTGTCCTCTGCTGGCCC 2256
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msj09154 2144 TGGAGGTCTGCCAGGATATAGCTCCTCTGTTTCCTGCTGGCCTGGTGAGT 2193
|||||||||||||||| || || | |||| || || ||||||| |
sj05025 2257 TGGAGGTCTGCCAGGACATGGCCACCGTGTTCCCAGCAGGCCTGGCCAAC 2306
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msj09154 2194 GTAGTGACAGGGGATCGCGACCACCTGACCCGCTGTCTGGCCTTACATCA 2243
|| |||||||| || || ||||| ||||||||||| |||||||| || ||
sj05025 2307 GTGGTGACAGGAGACCGGGACCATCTGACCCGCTGCCTGGCCTTGCACCA 2356
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msj09154 2244 GGATGTCCAAGCCCTGTGGTACTTCGGCTCGGCC................ 2277
|| ||||| ||| ||||||| ||||| || |||
sj05025 2357 AGACGTCCAGGCCATGTGGTATTTCGGATCAGCCCAGGTGCTCTTTGTTC 2406
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msj09154 2278 .................................................. 2278
sj05025 2407 TGTTTTGCCATCTTCAGCATCTCAAACTTCAAACAGGCTCCTCCTTTTCT 2456
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msj09154 2278 .................................................. 2278
sj05025 2457 GGAAACACAGCCCCGCCCTCTTAGAACTCCTGTTGGTAAGGGGAGAAACT 2506
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msj09154 2278 .................................................. 2278
sj05025 2507 CCTTGACAAGAAGGTTTTGAGGCCCCGCCCTTAGGACTCAAGTTACTAAG 2556
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msj09154 2278 .................................................. 2278
sj05025 2557 GAAGAGGCTGTCCTTAGCAACAGGGGCCTGAGAGCTGCCTAGCCCAAAGA 2606
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msj09154 2278 .................................................. 2278
sj05025 2607 CCTCGTCTCAGGGGACAGCCCGTTGCTAAGGACCACACCCTAGATTTGGA 2656
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msj09154 2278 .................................................. 2278
sj05025 2657 GGCCCACAGTCTACGCTTTGTTTTTCTATTTTGAGACAGAACCTCACCCT 2706
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msj09154 2278 .................................................. 2278
sj05025 2707 GTCACCCAGATGCAATCATACCTCACTGCAGCCGCAACCTCCCAGGCTCA 2756
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msj09154 2278 .................................................. 2278
sj05025 2757 AGCCACCGTCCCACCTCAGCTTCCTGAGTAGCTGGGACCACAGGCGTGCA 2806
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msj09154 2278 .................................................. 2278
sj05025 2807 CCACCATGCCCAGCTAATTTTTTTCTTTTGCAGAGACTGGGGTTTCTCTA 2856
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msj09154 2278 .................................................. 2278
sj05025 2857 TGTTGGCCAGGCTGATCTTGAACTCCTGGGCTCAAGTGATCTGCCCGCCT 2906
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msj09154 2278 .................................................. 2278
sj05025 2907 CGGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCAGCACAACTGGTTG 2956
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msj09154 2278 .................................................. 2278
sj05025 2957 AGTCTACTGTTTTTTTTTTATTTTATTTTATTTTATTTTATTTTTCTGTC 3006
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msj09154 2278 .................................................. 2278
sj05025 3007 GCCCAGGCTGGAATACAGTGGCACGATCTTGGCTCACTGCAACCTCTGCC 3056
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msj09154 2278 .................................................. 2278
sj05025 3057 TCCCGGGTTCAAGTGATTCTCCTGCCTCCCAAGTAGCTGAGACTACAGGC 3106
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msj09154 2278 .................................................. 2278
sj05025 3107 ACTCACCGCCATGCCCAGCTAATTGTTGGGGGTTTTTTTTTAGTAGAGAT 3156
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msj09154 2278 .................................................. 2278
sj05025 3157 GGGGTTTCGCCATATTGGCCAGGCTGGTCTCGAACTCCTGACCTCGCGTG 3206
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msj09154 2278 .................................................. 2278
sj05025 3207 ATCTGCCTGCCTCAGCCTCCCAAAATGCTGAGATTACAGGCGTGAGCCAC 3256
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msj09154 2278 .................................................. 2278
sj05025 3257 TGTGCCCAACCAATTTTTACTTTTTAAATGGAGACGGGGTCTCGCCATAT 3306
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msj09154 2278 .................................................. 2278
sj05025 3307 TGTCCAGGCTGGTCTCAAACTCCTGAACTCAAGCGATCCTCCCGCCTCAG 3356
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msj09154 2278 .................................................. 2278
sj05025 3357 CCACCCCAAGTGCTGGGATTACAGGAGCGAGTCACCGCGCCCCACCGTCC 3406
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msj09154 2278 .................................................. 2278
sj05025 3407 ACTCTCTTAAACCTCCTGTTGGTAACAGATGTGAACTTGTTGACAAGAGC 3456
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msj09154 2278 .................................................. 2278
sj05025 3457 CTTGGGGCCCATTCCTTTCAACATGGGCTGTTAAGGGAGAGGAAATTCCC 3506
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msj09154 2278 .................................................. 2278
sj05025 3507 TAACCACTGGGTCCAGTGCTTTTCCCTACCATCTGGAAGTTCTGCTTGGG 3556
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msj09154 2278 .................................................. 2278
sj05025 3557 AGGAGCTGGGCATTGTAGCTGCAGAGCCTGGGTCCAGCCTGAAGCCCCTC 3606
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msj09154 2278 .................................................. 2278
sj05025 3607 GTCAGTAACAGTCTTCATCGCGGAGGAAGCAGGTGCTCAGCAACAAGCCT 3656
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msj09154 2278 .................................CAGGGCTCCCAGTTTGT 2294
||||| |||||||||||
sj05025 3657 GCAGAAGTGCTTACCCCCGTCTCTTCCTCCCCTCAGGGTTCCCAGTTTGT 3706
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msj09154 2295 GGAATGGGCCTCTGCAGGAAACCTCAAGTCTGTGTGGGTAAACAGGGGCT 2344
|| |||||||| |||||||||||||| | ||||||| | ||||||||
sj05025 3707 CGAGTGGGCCTCGGCAGGAAACCTCAAACCGGTGTGGGCGAGCAGGGGCT 3756
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msj09154 2345 TCCCAAGGGCCTGGGATGTGGAGGTCCAGGGGGCAGGACAGGAGCTGAGT 2394
||| |||||||||| ||||| | |||||||||| | |||||| |
sj05025 3757 GCCCGCGGGCCTGGGACCAGGAGGCCGAGGGGGCAGGCCCAGAGCTGGGG 3806
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msj09154 2395 CTTCACGCAGCACGAACAAAGGCCCTGTGGCTGCCAATGGGGGACTGATG 2444
|| | | || || || ||||||||||||||||| ||||||||||||||
sj05025 3807 CTGCGAGTGGCGCGGACCAAGGCCCTGTGGCTGCCTATGGGGGACTGATG 3856
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msj09154 2445 CCGAA..GCCACCCACTCCATCTTTGATGCTCAGGAGCACCAAGTG.... 2488
|| | |||||| ||| ||| || || | | || | |
sj05025 3857 CCTGAGCGCCACCTACTGCATTTTGGACACCTCACACCAAGGGGAGATGC 3906
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msj09154 2489 ............CTTGGAACGTTTCTCTCAGATTTCCCATGGCTTCTAAT 2526
| ||| || || | || |||| || || | |||
sj05025 3907 ACCCCACGGACACCTGGGACTTTCCCCTTCTGGTTCCTGTGTCTCCCAAT 3956
4001 ----+----*----+----*----+--- 4028
msj09154 2527 AAACTGAGTGACTTTAACTGTGCATTTG 2554
||||| |||| ||
sj05025 3957 AAACTCTCTGACCAACCCT......... 3975