Comparison of KIAA cDNA sequences between mouse and human (FLJ00406)
<<Original sequence data>>
mouse mFLJ00406 (msj09148) length: 2334 bp, CDS: 160 - 813
human (sj08464) length: 4166 bp, CDS: 2573 - 3358
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 59 - 2572 405 180 30.8
CDS: 2573 - 2805 201 32 13.7
3'UTR: 2806 - 4385 650 680 51.1
amino acid
CDS: 2573 - 2805 55 23 29.5
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msj09148 1 .................................................. 1
sj08464 1 GGGTTTCGCCACGTTGCCCTGGCTGGTCTTGAACTCCGTGACTCAAACAA 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msj09148 1 ........CCTCGTTGTCC............................... 11
|||||| |||
sj08464 51 TCCGCACGCCTCGTCCTCCCAAAGTGCTGAGATTACAGGCCTGAGCCACC 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msj09148 12 .................................................. 12
sj08464 101 GCGCCCAGCCTGAACCCCCTACTTAATGTCAGAAATTTGATTTGACTTCA 150
151 ----+----*----+----*----+----*----+----*----+----* 200
msj09148 12 .................................................. 12
sj08464 151 CAGGGAAAGCCCTGAGAAACTACCAGAACGGGGTCCCTGGGGCCAGTGTT 200
201 ----+----*----+----*----+----*----+----*----+----* 250
msj09148 12 .................................................. 12
sj08464 201 GGGAGCGTACGGTGAAGTGGCAGGGCTGCTGCGCCCGTGCGGAACTCCGC 250
251 ----+----*----+----*----+----*----+----*----+----* 300
msj09148 12 ....GCATAGGTGCGTGTCCTACAACTTTTCGGGTTCCGACCCGCCGAGC 57
| | | || | ||| |||| | | | | | |
sj08464 251 TGTGGAAGATTAGCCCCTTTGGTGACTCGTCGGTTCTGGCCGCTTTGGGA 300
301 ----+----*----+----*----+----*----+----*----+----* 350
msj09148 58 CCTGTGCGGGTCATCGCTTGCGGATCTGGACCAGGCGCAAGGCAAATTGA 107
|| || || || | | || | | |||| | ||
sj08464 301 CCCTCTACTGTGCAGTCTGAACTTTCAGCAGGTGGAGGAGGGCAGAGAGA 350
351 ----+----*----+----*----+----*----+----*----+----* 400
msj09148 108 GGAAGCCGGGCGT..GTGCACTCCGGAGGAGGAGCCAGCGTAACGGGCCG 155
| | ||| || || || | | ||||||| | || |
sj08464 351 GAGCTGAGATCGTTGGTCCATGCCAGTGCGAGAGCCAGTACGGCCGGAAG 400
401 ----+----*----+----*----+----*----+----*----+----* 450
msj09148 156 CTA............................................... 158
| |
sj08464 401 CCATGATGGGACTTTCAGTTCCTTTCTTGGTGGAGGCCAGCACAGGGGAG 450
451 ----+----*----+----*----+----*----+----*----+----* 500
msj09148 159 .................................................. 159
sj08464 451 AGGGGGTGCCCACAGATGCTAGAAGCTTAAAGGCTGCTGGGGGCTAGCGG 500
501 ----+----*----+----*----+----*----+----*----+----* 550
msj09148 159 .................................................. 159
sj08464 501 CCTCAGGACATAAGGTTTCCAGACAGGACGGGGCAGGTGGTGATGCAGCT 550
551 ----+----*----+----*----+----*----+----*----+----* 600
msj09148 159 .................................................. 159
sj08464 551 GTAGCTCGTGAGTCTGAGCGGGAAACAGCCCCCGCGCAGTCGGTGTCGCT 600
601 ----+----*----+----*----+----*----+----*----+----* 650
msj09148 159 .................................................. 159
sj08464 601 GTGAACGGAAAAGGGCCTTCCTTACACAGGAAACGGGGTCTCTGGGGGAT 650
651 ----+----*----+----*----+----*----+----*----+----* 700
msj09148 159 .................................................. 159
sj08464 651 CCAGTGACGTGCCCAACCACAGAGACCAGGTGAGACTGGCTGATGGTGTC 700
701 ----+----*----+----*----+----*----+----*----+----* 750
msj09148 159 .................................................. 159
sj08464 701 TGGGGCTGCAGGTGACTTAGTTGGGGGACCTGCTCTTGGCCTCCAGACTG 750
751 ----+----*----+----*----+----*----+----*----+----* 800
msj09148 159 .............GTGGAGCTTGTTGGTAACTGAAGCCAGAGGGAGGCTT 195
| | || || | | | || | |||
sj08464 751 GGCCTGATGGCGTGGGCGCCTGCCTGTGTGCAGGCCCAAGGGCTCAGCTG 800
801 ----+----*----+----*----+----*----+----*----+----* 850
msj09148 196 CAGTTGTGTTTTTCCAAGCCTGGTCGGCTGTGCAGTAGAGCCCAG.GTTC 244
| ||| | || ||| || | |||| || | | | ||
sj08464 801 CCTCTGTCTGTTCCCAGACCCCTCCTCCTGTAGAGAGTGGTGCTGCCCTC 850
851 ----+----*----+----*----+----*----+----*----+----* 900
msj09148 245 CAAGAATGTATATGCAGGTGGAGACACGCACCAGCACCCGCCTCCATCTG 294
| ||||| ||||||||||||| ||||||||| ||||||||||||||
sj08464 851 TCGGGATGTACCTGCAGGTGGAGACCCGCACCAGCTCCCGCCTCCATCTG 900
901 ----+----*----+----*----+----*----+----*----+----* 950
msj09148 295 AAGAGGGCTCCAGGCATCCGGTCTTGGTCCCTGCTGG............. 331
||||||||||||||||||||||| |||||||||||||
sj08464 901 AAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGGTAAGGCTCT 950
951 ----+----*----+----*----+----*----+----*----+----* 1000
msj09148 332 .................................................. 332
sj08464 951 CCACGTCCCTCCCCAGAACCCCAGAACCGGAAGCCTGACTTTCAAAAAGG 1000
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msj09148 332 .................................................. 332
sj08464 1001 ATGAAAATGAAACAAAATATTTTCTCTTTTTTCTATTACCTTGAAATCTA 1050
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msj09148 332 .................................................. 332
sj08464 1051 ATGGCTATTTTGTTTCTTTGTATCCATTCAAATTCTATCTGGTGTACTTG 1100
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msj09148 332 .................................................. 332
sj08464 1101 GTTTTACAGATAATGCATGTCTGTTTTGTCCCCTTTTAATCACTAACACC 1150
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msj09148 332 .................................................. 332
sj08464 1151 CAGCGTATTTAATATACTCTATGAGCTTTTCTGAGGTCACCATATTTTCC 1200
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msj09148 332 .................................................. 332
sj08464 1201 TTTGTACTTGTTTTGAACCACGTGATGGGTGATCGTGGGTTCCCATGTCT 1250
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msj09148 332 .................................................. 332
sj08464 1251 CCTCCTCCCTGGTCCTCAGACCTCTTCGTAGGACTCACAGTCCACTAACC 1300
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msj09148 332 .................................................. 332
sj08464 1301 ACGTGATGGGTGATCGTGGGTTCCCATGTCTCCTCCTCCCTGGTCCTCAG 1350
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msj09148 332 .................................................. 332
sj08464 1351 ACCTCTTCGTAGGACTCACAGTCCACTAACCACGTGATGGGTGATCGTGG 1400
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msj09148 332 .................................................. 332
sj08464 1401 GTTCCCATGTCTCCTCCTCCCTGGTCCTCAGACCTCTTCGTAGGACTCAC 1450
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msj09148 332 .................................................. 332
sj08464 1451 AGTCCACTAACCACGTGATGGGTGATCGTGGGTTCCCATGTCTCCTCCTC 1500
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msj09148 332 .................................................. 332
sj08464 1501 CCTGGTCCTCAGACCTCTTCGTAGGACTCACAGTCCACTAACCACGTGAT 1550
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msj09148 332 .................................................. 332
sj08464 1551 GGGTGATCGTGGGTTCCCATGTCTCCTCCTCCCTGGTCCTCAGACCTCTT 1600
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msj09148 332 .................................................. 332
sj08464 1601 CGTAGGACTCACAGTCCACTAACCACGTGATGGGTGATCGTGGGTTCCCA 1650
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msj09148 332 .................................................. 332
sj08464 1651 TGTCTCCTCCTCCCTGGTCCTCAGACCTCTTCGTAGGACTCACAGTCCAC 1700
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msj09148 332 .................................................. 332
sj08464 1701 TTAGCCTCCCGTCCTCCATCGCTACCCACCAGTAGGGTCCTGTACCCTTG 1750
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msj09148 332 .................................................. 332
sj08464 1751 GGGACAGCTGCACTTGTGTTGACGGGACACCGTGTGAGGAGTGGTGCTGG 1800
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msj09148 332 .................................................. 332
sj08464 1801 CTGTACCTCAGCAGCTGGGGCCCACCTTTTTTGTGACACGCCACAGCCTC 1850
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msj09148 332 .................................................. 332
sj08464 1851 CTGTGTGTTTTGCATGACACGCTGTGTTGTAATTTCTTTGTGCACAGTCT 1900
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msj09148 332 .................................................. 332
sj08464 1901 TCAGGCCTCACCACGTGCTACTGGAGTAACACCCGTGTCAGTTATGGAGC 1950
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msj09148 332 .................................................. 332
sj08464 1951 CTCACACAGCAGATGTGTCTAGTAAATACTGTGAATAGCGTATACTGTGT 2000
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msj09148 332 .................................................. 332
sj08464 2001 TTTGCTTTTGTTTTCTTTAGTAATGAGGTCTCGTTATGTTGCCCAGGCTG 2050
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msj09148 332 .................................................. 332
sj08464 2051 GTCTCAAACTCCTGAGCTCAAGCGCTCTTCCTTCCTCGGCCTCCCAGGTA 2100
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msj09148 332 .................................................. 332
sj08464 2101 GCTGGGATTACAAGTGTGTGATACTACGCCCAGCTATACTGCATTATTGA 2150
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msj09148 332 .................................................. 332
sj08464 2151 ACCAGCTTCCTGGCTGTTTCCCCTACTCTGAACCTGGTGGTCTGTAACCC 2200
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msj09148 332 .................................................. 332
sj08464 2201 CTGACCACAGCTGTTCCTACAGTGGGAAGGGCCTGCTCATCAGGGGCTGT 2250
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msj09148 332 .................................................. 332
sj08464 2251 GGCTCCTGGTCCCGCTGCACCAGGGAGGTGGGGTCTTACCGGGATCAATA 2300
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msj09148 332 .......................TCGGAATATTATCCACTGGCCTGGCTG 358
| ||||| || || | |||||||||||
sj08464 2301 GGCAGGCAGTCACTTTCTCTTCATAGGAATCTTGTCGATTGGCCTGGCTG 2350
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msj09148 359 CTGCCTATTACAGTGGAGATAGTCTGGGCTGGAAGCTCTTCTATGTCACA 408
||||||| ||||| |||||||| |||||||||||||||||||| ||||||
sj08464 2351 CTGCCTACTACAGCGGAGATAGCCTGGGCTGGAAGCTCTTCTACGTCACA 2400
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msj09148 409 GGCTGCCTATTTGTGGCTGTACAGAACTTGGAAGACTGGGAGGAGGCCAT 458
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||
sj08464 2401 GGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTGGGAGGAAGCCAT 2450
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msj09148 459 TTTCAACAAGAACACTGGGAAGGTCATCTTAAAAACATTCAGCCTCTACA 508
||| |||||| ||| |||||||| | || || || |||||||||||||
sj08464 2451 CTTCGACAAGAGCACAGGGAAGGTTGTTTTGAAGACGTTCAGCCTCTACA 2500
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msj09148 509 AGAAGCTGCTGACTCTTCTCAGAGCGGGCCACGATCAAGTGGTGGTTCTG 558
||||||||||||||||| ||||||| |||||||| || |||||||| |||
sj08464 2501 AGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTG 2550
2551 ----+----*----+----*----+----*----+----*----+----* 2600
M W R R K R S V T L
msj09148 559 TTGAAAGACATCCAGGATGTGAATGTGGAGGAGGAAAAGGTCCGTTACTT 608
| | || ||| ||||||| ||||||||||| |||||||| |||||
sj08464 2551 CTCCATGATGTCCGTGATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACTT 2600
A W R R R R S G T S
2601 ----+----*----+----*----+----*----+----*----+----* 2650
G R A T W W C S G L Q Q A S P T
msj09148 609 TGGGAAGGGCTACATGGTGGTGCTCCGGTTTGCAACAGGCTTCTCCCACC 658
||||| ||||||||||||||||||||| |||| || |||||||||||||
sj08464 2601 CGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACC 2650
G K A T W W C S G L R R A S P T
2651 ----+----*----+----*----+----*----+----*----+----* 2700
L S L R V Q S W A D A V M W K P L
msj09148 659 CTCTCACTCAGAGTGCAGTCATGGGCCGACGCAGTGATGTGGAAGCCATT 708
| ||||| ||||||||||||||||||| ||||||||||||||||||||
sj08464 2651 CCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGTGATGTGGAAGCCATC 2700
P S R R V Q S W A T A V M W K P S
2701 ----+----*----+----*----+----*----+----*----+----* 2750
P N S S L A S W S C T A W R A P Q
msj09148 709 GCCAAACTCATCACTAGCTTCTTGGAGCTGCACCGCCTGGAGAGCCCCTC 758
||||| |||||||| |||||| ||||||||||| |||| ||||||||| |
sj08464 2701 GCCAAGCTCATCACCAGCTTCCTGGAGCTGCACTGCCTTGAGAGCCCCAC 2750
P S S S P A S W S C T A L R A P Q
2751 ----+----*----+----*----+----*----+----*----+----* 2800
N G H R A A T V N L M A L V A R
msj09148 759 AGAACGGTCACAGAGCAGCGACAGTGAACCTGATGGCCCTGGTGGCCAGA 808
||| | ||| ||||||||||||||||| | | || ||||| ||||||
sj08464 2751 AGAGCTGTCTCAGAGCAGCGACAGTGAGGCCGGTGACCCTGCAAGCCAGA 2800
S C L R A A T V R P V T L Q A R
2801 ----+----*----+----*----+----*----+----*----+----* 2850
V D S V D W L Q L M H
msj09148 809 GTTGACAGTGTGGACTGGCTGCAGGTAAATGCCATCCACTTCTGATGCAT 858
| |||||| || || | ||||
sj08464 2801 GCTGACAGCCCCACTGTGCCTGAG.................CCCGTGCAC 2833
A D S P T V P E P V H
2851 ----+----*----+----*----+----*----+----*----+----* 2900
L Q P D N C K G T - D L G H
msj09148 859 CTCCAACCGACTTGACAATTGTAAGGGTACAGG.....CAGATCTTGGGC 903
| || || | ||| || | | | || | || | | ||
sj08464 2834 CGCCCACAG....GACCCATGGCACATTCCCGGTGTGCCTGAGCCCGTGC 2879
R P Q D P W H I P G V P E P V H
2901 ----+----*----+----*----+----*----+----*----+----* 2950
L P V A P W Q F Y Y G P P A F C
msj09148 904 ACCTGCCTGTGGCTCCTTGGGCAGTTCTACTATGGGCCACCTGCCTTTTG 953
||| || || || | |||| | | || ||| || |
sj08464 2880 ACCGCCCACAGGACCCGT.GGCACATTCCCGGTGTGCCTGAGCCCGTGCA 2928
R P Q D P W H I P G V P E P V H
2951 ----+----*----+----*----+----*----+----*----+----* 3000
L F M Y T L Q - L G L D L C
msj09148 954 CTTGTTTATGCTTCTACACTTTGCAGA...ACCTTGGGCTAGACCTCTGC 1000
| | || | | ||| | | || || || | |
sj08464 2929 CCGCCCACAG....GACCCGTGGCACATTCCCGGTGTGCCTGAGCCCGTG 2974
R P Q D P W H I P G V P E P V
3001 ----+----*----+----*----+----*----+----*----+----* 3050
H N P E R L H L S G C R V W M L
msj09148 1001 CACAACCCA...GAAAGGTTGCATCTATCAGGATGCAGGGTGTGGATGCT 1047
||| |||| || || ||| | | || | | |||
sj08464 2975 CACCGCCCACAGGACCCGTGGCACATTCCCGGTGTGCCTGAGCCCGTGCA 3024
H R P Q D P W H I P G V P E P V H
3051 ----+----*----+----*----+----*----+----*----+----* 3100
H L G G A R S Q K * V P S P E L
msj09148 1048 ACATCTAGGGGGGGCAAGGTCT...CAGAAATGAGTGCCTTCTCCAGAGT 1094
| | | || | || || | | | |||||| | | ||||
sj08464 3025 CCGCCCACAGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGT 3074
R P Q D P W P W L Q L V P P A E L
3101 ----+----*----+----*----+----*----+----*----+----* 3150
H F G Q H S L - L D K L T
msj09148 1095 TACACTGCAGCTCTGGGTTGGGCAGCACAGCCTGGT.CTGGATAAGCTCA 1143
| || | | | || || ||| | || | | ||
sj08464 3075 TGGCCT...........ATTGCCTGCTCATGCTGCTGCTTGCACACTGCA 3113
A Y C L L M L L L A H C M
3151 ----+----*----+----*----+----*----+----*----+----* 3200
Q G Q S E A E N P S S L Q H R P
msj09148 1144 CCCAAGGGCAATCTGAAGCAGAAAATGCCAAGCTCTCTTCAGCATAGGCC 1193
|| ||| | | ||| | || ||| || ||| || | | | |
sj08464 3114 TGAAACAGCAGGCCAGACCAGGACAT.CCAGACTTTCTCCATCGTGAGGC 3162
K Q Q A R P G H P D F L H R E A
3201 ----+----*----+----*----+----*----+----*----+----* 3250
S A C L G D T L P L Q A T V S K T
msj09148 1194 TAGTGCCTGCCTTGGAGACACCTTGCCACTCCAGGCTACTGTAAGCAAGA 1243
| ||||||||| | || ||| ||| | | |
sj08464 3163 CTGGGCCTGCCTTTCTGCAGCCGGAGGTCTCGCCAGCCCTGGACTCCTGC 3212
W A C L S A A G G L A S P G L L L
3251 ----+----*----+----*----+----*----+----*----+----* 3300
P F L V - E T P I C T W A D T
msj09148 1244 CTCCATTCCTAGTGAG...TGAGACACCTATATGCACGTGGGCAGACACA 1290
| | || || | | | | | || || ||| |
sj08464 3213 TTTGGGCCACAGCAAGACCTCGGGCGAGTGGAGAGGCGGGGCCAGGCCGG 3262
W A T A R P R A S G E A G P G R
3301 ----+----*----+----*----+----*----+----*----+----* 3350
L L C T - D V C S L * P S -
msj09148 1291 CTCCTATGCACAG....TGATGTCTGTTCCCTCTGACCATCCCT...... 1330
||| | || || |||| | | ||| | |
sj08464 3263 GCCCTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTC 3312
A L V G A D A A C C P R H S V L S
3351 ----+----*----+----*----+----*----+----*----+----* 3400
K M D T L S G Q G L P * R Q L
msj09148 1331 CAAGATGGACACTCTCAGTGGTCAGGGGCTTCCCTGAAGGCAACTCTGGA 1380
| | |||||| | ||| ||||||| ||||||| | |||| ||
sj08464 3313 CCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGGGCAGTGAGGGG 3362
L V D I P S G Q V L P Q G Q *
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msj09148 1381 TGCTGGACACCTGACCACAGAACT................CTCAGAGGAA 1414
|| | | | || || | | | ||||
sj08464 3363 TGAACATCCAGGGCCTACCTGGCTGTGCACGCTGCAGCCACACTGTGGAA 3412
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msj09148 1415 TCCGAGTGCTGCTGACTACCC.AGTTCCTTCTTAGACCATGTGTCTGAGA 1463
| | | || |||| | |||| | | | ||| |
sj08464 3413 GCTGCCCCTCCCCGAGGACCCGCCTCCCTTGCTGATGCCAGGATCTCGGC 3462
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msj09148 1464 GCCCAGCAGTGTTGGAGCCCAGCTGTCAGGAATGGAAG........GCTC 1505
|| || | | |||||| ||| | | ||| | ||
sj08464 3463 GCATAG.ACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGTTC 3511
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msj09148 1506 TCCCAACCCAGCCTGGAAAGAAGGTGCTAG..CAGAGGAAAGATCACCTC 1553
| || |||| | | ||| || || |||| |||| ||| |||
sj08464 3512 CTCACACTCAGCTTCAGCATAAGCTGTGAGGCCAGAAAAAAGGTCAGCTC 3561
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msj09148 1554 TCCTGGCATCCTGCAGCCTTTAAGACCTGGGGGATCCCTTACAGAAACAG 1603
| || | ||| ||||| |||| | | ||| | ||| | | |
sj08464 3562 TTCTAGTATCGTGCAGTGCTTAAAAACCGGGAGCTCC.......AGCCGG 3604
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msj09148 1604 TCTTAGCCTTTCGAGCCTTGAAAAGACCTGAAGAAAACAGGCATGTGGAG 1653
| || ||| ||| | || | ||| | |
sj08464 3605 GCGCAGTGGTTCATGCC.............AGTAATCCCAGCACTTTCGG 3641
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msj09148 1654 ACACAGCCCAATAAATCCCAGTGTTGAGAACTGCAGCGGGAAGAACGTTC 1703
| || || ||| | ||| || ||||
sj08464 3642 .............AGGCCGAGGTGGGAGGATTGCTTGAGGCCAGGAGTTC 3678
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msj09148 1704 AAGGCCAGCCTGGGCCATGGCCTCTTCTAAGAAAAGTTGGTACCAACCAC 1753
||| |||||||||| ||||
sj08464 3679 AAGACCAGCCTGGG.............................CAACACA 3699
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msj09148 1754 TAATGGTCCTTTTCTGCTCTTCTAGTCTCCTTCTGGGTGGACTCAAGTTG 1803
| | |||| |
sj08464 3700 GCAAGATCCTGT...................................... 3711
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msj09148 1804 CTCAAAAGTACATTGTTTACTAAGTTCCCAGCCTGGCCTCTAGGCCTGGA 1853
| |||| | || | ||| | || | ||||
sj08464 3712 ..........CTTTGTAAAAAAACTAACCAAACAGG....AAAAACTGGG 3747
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msj09148 1854 AGCTGTGGCTCTCTGGCCTAACACAGCTCCTCGAAGCCTCATACGCATAC 1903
|| | | |||| || || ||| |||
sj08464 3748 AGAT.....TTTCTGCAGAAATTGAGTTCCAGCCTCTCTC.......... 3782
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msj09148 1904 CTCATCAGGCAGAACTGGGGAATTGAAGTTACATAGACAAAGGCCTTGAG 1953
|||| ||||| | | | || || |
sj08464 3783 ...........GAACCTGGGAAGACCTGGCAGGAGGGGGCTGGGCTCTCG 3821
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msj09148 1954 GCCACTGTACCTAAGCCGAGCATGGTAGTTAGGCAAGAACTATGAACAGG 2003
|| || ||| | | ||
sj08464 3822 GCTAC..............................AGACTTCTCCCCACC 3841
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msj09148 2004 TCTTCTGAAGTGACTGCCACTAGTTCTGACTTG...GGGAATATGGTCCC 2050
| | || ||| |||| | ||||| | | | ||||| |
sj08464 3842 CCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTC 3891
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msj09148 2051 TTAAACATGCCAAAGTGAGCTTTTTAAGTGGATAAGTTAGAGATTTC.TC 2099
| | | || | || | | | ||| | || | |
sj08464 3892 CTGAGTGTACCCAGGT...CCTCCCAGGTGCGGTGTGCACCGAGCGCGCC 3938
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msj09148 2100 TCCCCAGATGAAACGTGAAGTATAGCTTGTTGGGTTTTGGCTTGTTGCCT 2149
| || |||| | | |||| | | ||| |||
sj08464 3939 TGGCCTGATGGCCCTGGCCTGTGAGCTGGGGACTCCTGGGC......CCT 3982
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msj09148 2150 ATAGGCTCTTAAGGTACTTTAGACAAGAGAGGAAGGTGTCTTAGGTGCTG 2199
| || | || | | | | ||| |||
sj08464 3983 GTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAGGACAGGGAACA 4032
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msj09148 2200 TCATAGACTCACTCCTGGGTGACAGCATTCAATTCTCTATGGTGGTAAAA 2249
| | | | ||| |||| || | | || | | | | |
sj08464 4033 CCTTTGCCCCACGTCTGGCTGTGACC..TCGGTGAAAGCCGACAGGAGAG 4080
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msj09148 2250 AGCTGATTAGAGTTTCTGCTGGTGGGACTTCCACTTCTACTGGTCTTTTT 2299
|| || || | | | | || ||| | | || ||
sj08464 4081 AGATGGGACCCTCCTCCTCAGTAGTGGCTGCCAGTCC.....CTCGTTGC 4125
4351 ----+----*----+----*----+----*----+----*- 4391
msj09148 2300 ATTTCAGAAGTAATAAAGCTCTACATGCAACTTGC...... 2334
| ||| | | | | || || |||
sj08464 4126 AGGACAGGGTCATCATAACCATAAATAACCCTTCACGTGTC 4166