FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00123.ptfa, 490 aa vs ./tmplib.26680 library 1768527 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.6126+/-0.00582; mu= 8.6386+/- 0.387 mean_var=185.0829+/-44.406, 0's: 0 Z-trim: 5 B-trim: 0 in 0/36 Lambda= 0.0943 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4179 ( 500 res) mid07007 ( 500) 822 124 2.9e-29 mKIAA0129 ( 453 res) msh25292 ( 453) 215 41 0.0002 >>mKIAA4179 ( 500 res) mid07007 (500 aa) initn: 956 init1: 440 opt: 822 Z-score: 617.7 bits: 123.8 E(): 2.9e-29 Smith-Waterman score: 940; 35.762% identity (38.942% ungapped) in 453 aa overlap (39-490:74-490) 10 20 30 40 50 60 mFLJ00 DEDEEEEVLEEDEEEELDPITQLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVI : : :: :::. ::.::: ::..::.. mKIAA4 CLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIA 50 60 70 80 90 100 70 80 90 100 110 120 mFLJ00 RQMHPTPGRGSRVNEQGICPRHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQ .:.. . .. ....: .:.: :.::: :.::.:..: :..:. :.:::.....: mKIAA4 KQLQTVK---RKIRDESLCSQHHEPLSLFCYEDQEAVCLICAISHTHRPHTVVPMDDATQ 110 120 130 140 150 160 130 140 150 160 170 180 mFLJ00 EYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQ ::: ::: .:::...:. . ::.::.. ::: ..:. . .:: .: : : ::: mKIAA4 EYKEKLQKCLEPLEQKLQEITCCKASEEKKPGELKRLVESRRQQILKEFEELHRRLDEEQ 170 180 190 200 210 220 190 200 210 220 230 240 mFLJ00 AGLERRLREMHEAQLGRAGAAANRLEEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNR : ::.: .. : : : .: .. .:..: ::.. . :.:...:.:.: :... mKIAA4 QTLLSRLEEEEQDILQRLRENAAHLGDRRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEK 230 240 250 260 270 280 250 260 270 280 290 300 mFLJ00 CEEIQLQPPEIWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSP ::... . : . . :. .::. ... .:.::::.:::: :.:: mKIAA4 CEKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLI----ADVTLDPETAHPNLVLSE 290 300 310 320 330 310 320 330 340 350 360 mFLJ00 DRRGVRLAERR-QEVPEHSKRFSADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAAREST ::..:...: : ...:. .::. :::...:: ::::::::::: . ::::. :.:. mKIAA4 DRKSVKFVETRLRDLPDTPQRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSV 340 350 360 370 380 390 370 380 390 400 410 420 mFLJ00 HHKEKVGSGGSSVSSGDASSSRHHHRRRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQ .: :. . ::. . ..: .: .: : ..: mKIAA4 SRK------------GELTP-----------LPETGYWRVRLW----NGDKYAA-TTTPF 400 410 420 430 440 450 460 470 480 mFLJ00 TLLSPCEKPRRFGVYLDYEAGRLGFYNADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIK : : ::.: :..:::::: :.:::. .:..::. .: :...:.: .. : . mKIAA4 TPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFT-EKLWPLFYPGIRAGRKN 430 440 450 460 470 480 490 mFLJ00 LCP : mKIAA4 AAPLTIRPPTDWE 490 500 >>mKIAA0129 ( 453 res) msh25292 (453 aa) initn: 431 init1: 179 opt: 215 Z-score: 172.0 bits: 41.2 E(): 0.0002 Smith-Waterman score: 424; 29.474% identity (35.990% ungapped) in 475 aa overlap (53-479:6-442) 30 40 50 60 70 80 mFLJ00 EELDPITQLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQ-MHPTPGRGSRV : : :..:. . : ..: . : : mKIAA0 PTTLHREQRLPLRMASETTEARAPFQPDGAYGWR- 10 20 30 90 100 110 120 130 140 mFLJ00 NEQGICPRHQE-ALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEP ::.:.: .:::. . .:..: .:. : : :: . . . .: .: mKIAA0 -----CPEHSERPAELFCRRCGRCVCALCPVLGAHRGHPVGLAEEEAVRVQKLIQDCLEC 40 50 60 70 80 150 160 170 180 190 mFLJ00 L----RKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRL- : :.: . . ... :: :: : : ....: .: :.: .:. : ... mKIAA0 LATKKRQHADNIAHLEDAGER----LKVYADSSKAWLTQKFTEL-RLLLDEEEVLAKKFI 90 100 110 120 130 140 200 210 220 230 mFLJ00 -----------REMHEA---QLGRAGAAANRL-----EEQAAQL-SRLLAEAQERSQQGG ::. :. :. ..:. : . .:: . .: : .:: . mKIAA0 DKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWGIGQEPNPVQLLQAYIATKTEMGQQMS 150 160 170 180 190 200 240 250 260 270 280 mFLJ00 LRLL--------QDIKETFNRCEEI---QLQPP---EIWSPDPCQPHSHDFLTDAIVRKM : . .:. :.. : :: : .. :: . . . . : mKIAA0 PSELSHPVPLSFEPVKNFFKEFVEAIGNTLQTPMDTRLKENINCQLSNSSSTKPGALLKT 210 220 230 240 250 260 290 300 310 320 330 mFLJ00 S-----RMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFSADCCVL : .: . ::. :::::: : : :::: :: . . :. . ::.: :: mKIAA0 SPSPERALFLKYARTP-TLDPDTMHARLRLSPDGLTVRCSLLGRLGPRPAPRFDALRQVL 270 280 290 300 310 320 340 350 360 370 380 390 mFLJ00 GAQGFRSGRHYWEVEVG-GRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRHHHRRR : .:: .:::::::.: . :: :::: : ::: mKIAA0 GRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSL-------------------------RRR 330 340 350 400 410 420 430 440 450 mFLJ00 RLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGFYN- .: .:: ::: . .: : . ... : : . :.:.::.:::::: :.::. mKIAA0 GASAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFYDV 360 370 380 390 400 410 460 470 480 490 mFLJ00 ADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP : ..:.::: ::: : ..: .:. mKIAA0 AGGMSHLHTFHAAFQ-EPLYPALRLWEGPISIPRLP 420 430 440 450 490 residues in 1 query sequences 1768527 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:07:05 2006 done: Mon Mar 27 10:07:06 2006 Scan time: 0.670 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]