# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msj07117.fasta.nr -Q ../query/mFLJ00123.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00123, 490 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7915832 sequences Expectation_n fit: rho(ln(x))= 5.5092+/-0.000191; mu= 10.8910+/- 0.011 mean_var=91.5897+/-17.679, 0's: 35 Z-trim: 65 B-trim: 41 in 1/65 Lambda= 0.134014 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|56800242|emb|CAI35108.1| tripartite motif-conta ( 630) 3345 656.8 4.6e-186 gi|195540035|gb|AAI68206.1| Trim41 protein [Rattus ( 534) 3322 652.3 8.9e-185 gi|197927145|ref|NP_001128209.1| tripartite motif- ( 628) 3322 652.4 1e-184 gi|73970297|ref|XP_548790.2| PREDICTED: similar to ( 629) 3209 630.5 3.8e-178 gi|123983410|gb|ABM83446.1| tripartite motif-conta ( 545) 3190 626.8 4.4e-177 gi|48257198|gb|AAH18765.2| TRIM41 protein [Homo sa ( 552) 3190 626.8 4.4e-177 gi|116242826|sp|Q8WV44.3|TRI41_HUMAN RecName: Full ( 630) 3190 626.9 4.8e-177 gi|76622765|ref|XP_870480.1| PREDICTED: similar to ( 629) 3186 626.1 8.3e-177 gi|41016417|dbj|BAD07472.1| hypothetical protein [ ( 630) 3179 624.7 2.1e-176 gi|149726010|ref|XP_001495265.1| PREDICTED: simila ( 631) 3164 621.8 1.6e-175 gi|114603949|ref|XP_001157098.1| PREDICTED: hypoth ( 629) 3035 596.9 5.1e-168 gi|126309389|ref|XP_001372311.1| PREDICTED: simila ( 627) 2952 580.8 3.4e-163 gi|109080185|ref|XP_001104219.1| PREDICTED: simila ( 544) 2473 488.2 2.3e-135 gi|119574098|gb|EAW53713.1| tripartite motif-conta ( 494) 2284 451.6 2.2e-124 gi|109080183|ref|XP_001104049.1| PREDICTED: simila ( 517) 2282 451.2 2.9e-124 gi|119574097|gb|EAW53712.1| tripartite motif-conta ( 518) 2273 449.5 9.9e-124 gi|16416394|dbj|BAB70617.1| hypothetical protein [ ( 439) 2262 447.3 3.8e-123 gi|41016419|dbj|BAD07473.1| hypothetical protein [ ( 518) 2262 447.4 4.3e-123 gi|52545735|emb|CAH56279.1| hypothetical protein [ ( 403) 2259 446.7 5.3e-123 gi|194219468|ref|XP_001495283.2| PREDICTED: simila ( 514) 2253 445.6 1.4e-122 gi|114603951|ref|XP_001157049.1| PREDICTED: hypoth ( 517) 2118 419.5 1e-114 gi|119574095|gb|EAW53710.1| tripartite motif-conta ( 257) 1578 314.9 1.7e-83 gi|13436338|gb|AAH04956.1|AAH04956 Unknown (protei ( 361) 1513 302.4 1.3e-79 gi|119574099|gb|EAW53714.1| tripartite motif-conta ( 381) 1513 302.4 1.3e-79 gi|18043653|gb|AAH20156.1| Trim41 protein [Mus mus ( 210) 1454 290.8 2.4e-76 gi|113811871|gb|AAH09762.2| TRIM41 protein [Homo s ( 220) 1444 288.9 9.3e-76 gi|114603953|ref|XP_001156953.1| PREDICTED: hypoth ( 395) 1423 285.0 2.4e-74 gi|52545625|emb|CAB70832.2| hypothetical protein [ ( 301) 1411 282.6 9.8e-74 gi|73970299|ref|XP_855799.1| PREDICTED: similar to ( 210) 1389 278.2 1.4e-72 gi|10834704|gb|AAG23782.1|AF258579_1 PP4522 [Homo ( 210) 1382 276.9 3.6e-72 gi|169730360|gb|ACA64761.1| tripartite motif prote ( 627) 1155 233.4 1.3e-58 gi|149052381|gb|EDM04198.1| rCG34522 [Rattus norve ( 177) 1138 229.6 5.1e-58 gi|58761176|gb|AAW82328.1| TRIM41 [Gallus gallus] ( 589) 1139 230.3 1.1e-57 gi|18676452|dbj|BAB84878.1| FLJ00123 protein [Homo ( 255) 1056 213.9 4e-53 gi|119574096|gb|EAW53711.1| tripartite motif-conta ( 311) 1056 214.0 4.6e-53 gi|56800243|emb|CAI35109.1| tripartite motif-conta ( 161) 1043 211.2 1.6e-52 gi|56800244|emb|CAI35110.1| tripartite motif-conta ( 156) 926 188.6 1e-45 gi|119574092|gb|EAW53707.1| tripartite motif-conta ( 349) 909 185.6 1.8e-44 gi|149412073|ref|XP_001509541.1| PREDICTED: simila ( 527) 873 178.8 3e-42 gi|126309495|ref|XP_001368421.1| PREDICTED: simila ( 487) 853 174.9 4.2e-41 gi|62088148|dbj|BAD92521.1| tripartite motif-conta ( 352) 850 174.2 4.9e-41 gi|55727162|emb|CAH90337.1| hypothetical protein [ ( 488) 847 173.8 9.3e-41 gi|194223290|ref|XP_001492226.2| PREDICTED: simila ( 487) 844 173.2 1.4e-40 gi|56805544|dbj|BAD83393.1| tripartite motif-conta ( 488) 843 173.0 1.6e-40 gi|14043332|gb|AAH07661.1| TRIM39 protein [Homo sa ( 488) 842 172.8 1.8e-40 gi|30584093|gb|AAP36295.1| Homo sapiens tripartite ( 489) 842 172.8 1.8e-40 gi|67969808|dbj|BAE01252.1| unnamed protein produc ( 488) 841 172.6 2.1e-40 gi|194040114|ref|XP_001929611.1| PREDICTED: simila ( 488) 840 172.4 2.4e-40 gi|73972054|ref|XP_538824.2| PREDICTED: similar to ( 488) 838 172.0 3.1e-40 gi|56404683|sp|Q6MFZ5.1|TRI39_RAT RecName: Full=Tr ( 488) 835 171.4 4.7e-40 >>gi|56800242|emb|CAI35108.1| tripartite motif-containin (630 aa) initn: 3345 init1: 3345 opt: 3345 Z-score: 3496.7 bits: 656.8 E(): 4.6e-186 Smith-Waterman score: 3345; 100.000% identity (100.000% similar) in 490 aa overlap (1-490:141-630) 10 20 30 mFLJ00 DVADLRGEDEDEEEEVLEEDEEEELDPITQ :::::::::::::::::::::::::::::: gi|568 GIGGSNWDNMDYVWEEEEEEEEEELDYYLGDVADLRGEDEDEEEEVLEEDEEEELDPITQ 120 130 140 150 160 170 40 50 60 70 80 90 mFLJ00 LPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 LPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRH 180 190 200 210 220 230 100 110 120 130 140 150 mFLJ00 QEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 QEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQK 240 250 260 270 280 290 160 170 180 190 200 210 mFLJ00 MKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 MKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAA 300 310 320 330 340 350 220 230 240 250 260 270 mFLJ00 NRLEEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 NRLEEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSH 360 370 380 390 400 410 280 290 300 310 320 330 mFLJ00 DFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 DFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFS 420 430 440 450 460 470 340 350 360 370 380 390 mFLJ00 ADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 ADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRH 480 490 500 510 520 530 400 410 420 430 440 450 mFLJ00 HHRRRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 HHRRRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRL 540 550 560 570 580 590 460 470 480 490 mFLJ00 GFYNADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP :::::::::::::::::::::::::::::::::::::::: gi|568 GFYNADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP 600 610 620 630 >>gi|195540035|gb|AAI68206.1| Trim41 protein [Rattus nor (534 aa) initn: 3322 init1: 3322 opt: 3322 Z-score: 3473.6 bits: 652.3 E(): 8.9e-185 Smith-Waterman score: 3322; 99.388% identity (99.592% similar) in 490 aa overlap (1-490:45-534) 10 20 30 mFLJ00 DVADLRGEDEDEEEEVLEEDEEEELDPITQ :: ::: ::::::::::::::::::::::: gi|195 SSGIGGSNWDNMDYVWEEEEEEEELDYYLGDVEDLRVEDEDEEEEVLEEDEEEELDPITQ 20 30 40 50 60 70 40 50 60 70 80 90 mFLJ00 LPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 LPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRH 80 90 100 110 120 130 100 110 120 130 140 150 mFLJ00 QEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 QEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQK 140 150 160 170 180 190 160 170 180 190 200 210 mFLJ00 MKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 MKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAA 200 210 220 230 240 250 220 230 240 250 260 270 mFLJ00 NRLEEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSH :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 NRLEEQAVQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSH 260 270 280 290 300 310 280 290 300 310 320 330 mFLJ00 DFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 DFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFS 320 330 340 350 360 370 340 350 360 370 380 390 mFLJ00 ADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 ADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRH 380 390 400 410 420 430 400 410 420 430 440 450 mFLJ00 HHRRRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 HHRRRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRL 440 450 460 470 480 490 460 470 480 490 mFLJ00 GFYNADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP :::::::::::::::::::::::::::::::::::::::: gi|195 GFYNADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP 500 510 520 530 >>gi|197927145|ref|NP_001128209.1| tripartite motif-cont (628 aa) initn: 3322 init1: 3322 opt: 3322 Z-score: 3472.7 bits: 652.4 E(): 1e-184 Smith-Waterman score: 3322; 99.388% identity (99.592% similar) in 490 aa overlap (1-490:139-628) 10 20 30 mFLJ00 DVADLRGEDEDEEEEVLEEDEEEELDPITQ :: ::: ::::::::::::::::::::::: gi|197 SSGIGGSNWDNMDYVWEEEEEEEELDYYLGDVEDLRVEDEDEEEEVLEEDEEEELDPITQ 110 120 130 140 150 160 40 50 60 70 80 90 mFLJ00 LPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 LPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRH 170 180 190 200 210 220 100 110 120 130 140 150 mFLJ00 QEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 QEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQK 230 240 250 260 270 280 160 170 180 190 200 210 mFLJ00 MKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 MKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAA 290 300 310 320 330 340 220 230 240 250 260 270 mFLJ00 NRLEEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSH :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 NRLEEQAVQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSH 350 360 370 380 390 400 280 290 300 310 320 330 mFLJ00 DFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 DFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFS 410 420 430 440 450 460 340 350 360 370 380 390 mFLJ00 ADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 ADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRH 470 480 490 500 510 520 400 410 420 430 440 450 mFLJ00 HHRRRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 HHRRRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRL 530 540 550 560 570 580 460 470 480 490 mFLJ00 GFYNADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP :::::::::::::::::::::::::::::::::::::::: gi|197 GFYNADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP 590 600 610 620 >>gi|73970297|ref|XP_548790.2| PREDICTED: similar to tri (629 aa) initn: 3209 init1: 3209 opt: 3209 Z-score: 3354.6 bits: 630.5 E(): 3.8e-178 Smith-Waterman score: 3209; 95.893% identity (98.768% similar) in 487 aa overlap (4-490:143-629) 10 20 30 mFLJ00 DVADLRGEDEDEEEEVLEEDEEEELDPITQLPP :::::::..:::::::::::::::.: ::: gi|739 GGSNWDNMDYVWEEEDEEEDLDYYLGDMEEDLRGEDEEDEEEVLEEDEEEELDPVTPLPP 120 130 140 150 160 170 40 50 60 70 80 90 mFLJ00 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRHQEA ::::::::::::::::::::::::::::::::::::::::::::::: .::::::.:::: gi|739 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRGSEQGICPKHQEA 180 190 200 210 220 230 100 110 120 130 140 150 mFLJ00 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA 240 250 260 270 280 290 160 170 180 190 200 210 mFLJ00 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAANRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|739 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRL 300 310 320 330 340 350 220 230 240 250 260 270 mFLJ00 EEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSHDFL :::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::: gi|739 AEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFL 360 370 380 390 400 410 280 290 300 310 320 330 mFLJ00 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFSADC :::::::::::::::::::::::::::::::.::::::::::::::::: .::::::::: gi|739 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHSKRFSADC 420 430 440 450 460 470 340 350 360 370 380 390 mFLJ00 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRHHHR :::::::::::::::::::::::::::::::::::::::::::::::..::::::::::: gi|739 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVGGGDASSSRHHHR 480 490 500 510 520 530 400 410 420 430 440 450 mFLJ00 RRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGFY ::::::::: :::::::::::.::::::::::::::::: :::::::::::::::::::: gi|739 RRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFY 540 550 560 570 580 590 460 470 480 490 mFLJ00 NADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP ::.:::::::::::::::::::::::::::::::::: gi|739 NAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP 600 610 620 >>gi|123983410|gb|ABM83446.1| tripartite motif-containin (545 aa) initn: 3190 init1: 3190 opt: 3190 Z-score: 3335.6 bits: 626.8 E(): 4.4e-177 Smith-Waterman score: 3190; 95.277% identity (98.357% similar) in 487 aa overlap (4-490:59-545) 10 20 30 mFLJ00 DVADLRGEDEDEEEEVLEEDEEEELDPITQLPP :::::::..::::::: :::.:::.: ::: gi|123 RSSWDNMDYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPP 30 40 50 60 70 80 40 50 60 70 80 90 mFLJ00 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRHQEA ::::::::::::::::::::::::::::::::::::::::::::::::..:::::.:::: gi|123 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEA 90 100 110 120 130 140 100 110 120 130 140 150 mFLJ00 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA 150 160 170 180 190 200 160 170 180 190 200 210 mFLJ00 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAANRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|123 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRL 210 220 230 240 250 260 220 230 240 250 260 270 mFLJ00 EEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSHDFL :::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::: gi|123 AEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFL 270 280 290 300 310 320 280 290 300 310 320 330 mFLJ00 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFSADC :::::::::::::::::::::::::::::::.::::::::::::::::: .: ::::::: gi|123 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADC 330 340 350 360 370 380 340 350 360 370 380 390 mFLJ00 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRHHHR ::::::::::::::::::::::::::::::::::::::::: :::::.:::::::::::: gi|123 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGPGGSSVGSGDASSSRHHHR 390 400 410 420 430 440 400 410 420 430 440 450 mFLJ00 RRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGFY ::::::::: :::::::::::.::::::::::::::::: :::::::::::::::::::: gi|123 RRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFY 450 460 470 480 490 500 460 470 480 490 mFLJ00 NADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP ::.:::::::::::::::::::::::::::::::::: gi|123 NAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP 510 520 530 540 >>gi|48257198|gb|AAH18765.2| TRIM41 protein [Homo sapien (552 aa) initn: 3190 init1: 3190 opt: 3190 Z-score: 3335.5 bits: 626.8 E(): 4.4e-177 Smith-Waterman score: 3190; 95.277% identity (98.357% similar) in 487 aa overlap (4-490:66-552) 10 20 30 mFLJ00 DVADLRGEDEDEEEEVLEEDEEEELDPITQLPP :::::::..::::::: :::.:::.: ::: gi|482 RSSWDNMDYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPP 40 50 60 70 80 90 40 50 60 70 80 90 mFLJ00 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRHQEA ::::::::::::::::::::::::::::::::::::::::::::::::..:::::.:::: gi|482 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEA 100 110 120 130 140 150 100 110 120 130 140 150 mFLJ00 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA 160 170 180 190 200 210 160 170 180 190 200 210 mFLJ00 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAANRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|482 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRL 220 230 240 250 260 270 220 230 240 250 260 270 mFLJ00 EEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSHDFL :::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::: gi|482 AEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFL 280 290 300 310 320 330 280 290 300 310 320 330 mFLJ00 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFSADC :::::::::::::::::::::::::::::::.::::::::::::::::: .: ::::::: gi|482 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADC 340 350 360 370 380 390 340 350 360 370 380 390 mFLJ00 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRHHHR ::::::::::::::::::::::::::::::::::::::::: :::::.:::::::::::: gi|482 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGPGGSSVGSGDASSSRHHHR 400 410 420 430 440 450 400 410 420 430 440 450 mFLJ00 RRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGFY ::::::::: :::::::::::.::::::::::::::::: :::::::::::::::::::: gi|482 RRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFY 460 470 480 490 500 510 460 470 480 490 mFLJ00 NADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP ::.:::::::::::::::::::::::::::::::::: gi|482 NAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP 520 530 540 550 >>gi|116242826|sp|Q8WV44.3|TRI41_HUMAN RecName: Full=Tri (630 aa) initn: 3190 init1: 3190 opt: 3190 Z-score: 3334.8 bits: 626.9 E(): 4.8e-177 Smith-Waterman score: 3190; 95.277% identity (98.357% similar) in 487 aa overlap (4-490:144-630) 10 20 30 mFLJ00 DVADLRGEDEDEEEEVLEEDEEEELDPITQLPP :::::::..::::::: :::.:::.: ::: gi|116 RSSWDNMDYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPP 120 130 140 150 160 170 40 50 60 70 80 90 mFLJ00 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRHQEA ::::::::::::::::::::::::::::::::::::::::::::::::..:::::.:::: gi|116 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEA 180 190 200 210 220 230 100 110 120 130 140 150 mFLJ00 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA 240 250 260 270 280 290 160 170 180 190 200 210 mFLJ00 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAANRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|116 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRL 300 310 320 330 340 350 220 230 240 250 260 270 mFLJ00 EEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSHDFL :::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::: gi|116 AEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFL 360 370 380 390 400 410 280 290 300 310 320 330 mFLJ00 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFSADC :::::::::::::::::::::::::::::::.::::::::::::::::: .: ::::::: gi|116 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADC 420 430 440 450 460 470 340 350 360 370 380 390 mFLJ00 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRHHHR ::::::::::::::::::::::::::::::::::::::::: :::::.:::::::::::: gi|116 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGPGGSSVGSGDASSSRHHHR 480 490 500 510 520 530 400 410 420 430 440 450 mFLJ00 RRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGFY ::::::::: :::::::::::.::::::::::::::::: :::::::::::::::::::: gi|116 RRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFY 540 550 560 570 580 590 460 470 480 490 mFLJ00 NADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP ::.:::::::::::::::::::::::::::::::::: gi|116 NAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP 600 610 620 630 >>gi|76622765|ref|XP_870480.1| PREDICTED: similar to Tri (629 aa) initn: 3186 init1: 3186 opt: 3186 Z-score: 3330.6 bits: 626.1 E(): 8.3e-177 Smith-Waterman score: 3186; 95.277% identity (98.563% similar) in 487 aa overlap (4-490:143-629) 10 20 30 mFLJ00 DVADLRGEDEDEEEEVLEEDEEEELDPITQLPP :::::.:..:::::::::::::::.: ::: gi|766 GGSNWDNMDYVWEEEEEEEDLDYYLGDMEEDLRGEEEEDEEEVLEEDEEEELDPVTPLPP 120 130 140 150 160 170 40 50 60 70 80 90 mFLJ00 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRHQEA ::.:::::::::::::::::::::::::::::::::::::: ::::: :::::::.:::: gi|766 PPTPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTAGRGSRGNEQGICPKHQEA 180 190 200 210 220 230 100 110 120 130 140 150 mFLJ00 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|766 LKLFCEVDEEAICVVCRESRNHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA 240 250 260 270 280 290 160 170 180 190 200 210 mFLJ00 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAANRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|766 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRL 300 310 320 330 340 350 220 230 240 250 260 270 mFLJ00 EEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSHDFL :::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::: gi|766 SEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFL 360 370 380 390 400 410 280 290 300 310 320 330 mFLJ00 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFSADC :::::::::::::::::::::::::::::::.::::::.:::::::::: .::::::::: gi|766 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRAVRLAERRQEVADHSKRFSADC 420 430 440 450 460 470 340 350 360 370 380 390 mFLJ00 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRHHHR :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|766 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVGSGDASSSRHHHR 480 490 500 510 520 530 400 410 420 430 440 450 mFLJ00 RRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGFY ::::::::: :::::::::::.::::::::::::::::: :::::::::::::::::::: gi|766 RRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFY 540 550 560 570 580 590 460 470 480 490 mFLJ00 NADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP ::.:::::::::::::::::::::::::::::::::: gi|766 NAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP 600 610 620 >>gi|41016417|dbj|BAD07472.1| hypothetical protein [Homo (630 aa) initn: 3179 init1: 3179 opt: 3179 Z-score: 3323.3 bits: 624.7 E(): 2.1e-176 Smith-Waterman score: 3179; 95.072% identity (98.152% similar) in 487 aa overlap (4-490:144-630) 10 20 30 mFLJ00 DVADLRGEDEDEEEEVLEEDEEEELDPITQLPP :::::::..::::::: :::.:::.: ::: gi|410 RSSWDNMDYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPP 120 130 140 150 160 170 40 50 60 70 80 90 mFLJ00 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRHQEA ::::::::::::::::::::::::::::::::::::::::::::::::..:::::.:::: gi|410 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEA 180 190 200 210 220 230 100 110 120 130 140 150 mFLJ00 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: gi|410 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQEHVEPLRKHLEAVQKMKA 240 250 260 270 280 290 160 170 180 190 200 210 mFLJ00 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAANRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|410 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRL 300 310 320 330 340 350 220 230 240 250 260 270 mFLJ00 EEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSHDFL :::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::: gi|410 AEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFL 360 370 380 390 400 410 280 290 300 310 320 330 mFLJ00 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFSADC :::::::::::::::::::::::::::::::.::::::::::::::::: .: ::::::: gi|410 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADC 420 430 440 450 460 470 340 350 360 370 380 390 mFLJ00 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRHHHR ::::::::::::::::::::::::::::::::::::::::: :::::.:::::::::::: gi|410 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGPGGSSVGSGDASSSRHHHR 480 490 500 510 520 530 400 410 420 430 440 450 mFLJ00 RRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGFY ::::::::: :::::::::::.::::::::::::::::: :::::::::::::::::::: gi|410 RRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFY 540 550 560 570 580 590 460 470 480 490 mFLJ00 NADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP ::.:::::::::::::::::::::::::::::::::: gi|410 NAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP 600 610 620 630 >>gi|149726010|ref|XP_001495265.1| PREDICTED: similar to (631 aa) initn: 2541 init1: 2541 opt: 3164 Z-score: 3307.6 bits: 621.8 E(): 1.6e-175 Smith-Waterman score: 3164; 94.672% identity (98.361% similar) in 488 aa overlap (4-490:144-631) 10 20 30 mFLJ00 DVADLRGEDEDEEEEVLEEDEEEELDPITQLPP :::::::..::.::::.::..:::.: ::: gi|149 GGSNWDNMDYVWEEEDEEEDLDYYLGDMEEDLRGEDEEDEEDVLEEEEEDDLDPVTPLPP 120 130 140 150 160 170 40 50 60 70 80 90 mFLJ00 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRHQEA ::.:::::::::::::::::::::::::::::::::::::::::::: .::::::.:::: gi|149 PPVPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRGTEQGICPKHQEA 180 190 200 210 220 230 100 110 120 130 140 150 mFLJ00 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKA 240 250 260 270 280 290 160 170 180 190 200 210 mFLJ00 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAANRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAANRL 300 310 320 330 340 350 220 230 240 250 260 270 mFLJ00 EEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSHDFL :::.:::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|149 AEQATQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEIWSPDPCQPHSHDFL 360 370 380 390 400 410 280 290 300 310 320 330 mFLJ00 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFSADC :::::::::::::::::::::::::::::::.:::: :::::::::::: .::::::.:: gi|149 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDCRGVRLAERRQEVADHSKRFSGDC 420 430 440 450 460 470 340 350 360 370 380 390 mFLJ00 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSS-RHHH :::::::::::::::::::::::::::::::::::::::::::::::.::::::: :::: gi|149 CVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVGSGDASSSSRHHH 480 490 500 510 520 530 400 410 420 430 440 450 mFLJ00 RRRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGF :::::::::: :::::::::::.::::::::::::::::: ::::::::::::::::::: gi|149 RRRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGF 540 550 560 570 580 590 460 470 480 490 mFLJ00 YNADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP :::.:::::::::::::::::::::::::::::::::: gi|149 YNAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP 600 610 620 630 490 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 18:02:03 2009 done: Thu Mar 12 18:09:02 2009 Total Scan time: 939.490 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]