Comparison of KIAA cDNA sequences between mouse and human (FLJ00123)
<<Original sequence data>>
mouse mFLJ00123 (msj07117) length: 2315 bp, CDS: 2 - 1474
human (sh00869) length: 5709 bp, CDS: 3 - 770
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 254 - 254 1 0 0.0
CDS: 255 - 770 430 58 11.9
3'UTR: 771 - 5724 1500 339 18.4
amino acid
CDS: 255 - 770 150 22 12.8
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msj07117 1 .................................................. 1
sh00869 1 GAGATGAGTTAGATCGGGAGGAGGAGGAGGAGGACGGAGAGGAGGAGGAA 50
D E L D R E E E E E D G E E E E
51 ----+----*----+----*----+----*----+----*----+----* 100
msj07117 1 .................................................. 1
sh00869 51 GTGGAGGCTGTGGGGGCTGGCGCGGGGTGGGACACCCCCATGCGGGATGA 100
V E A V G A G A G W D T P M R D E
101 ----+----*----+----*----+----*----+----*----+----* 150
msj07117 1 .................................................. 1
sh00869 101 AGACTACGAGGGTGACATGGAGGAGGAGGTCGAGGAGGAAGAAGAGGGTG 150
D Y E G D M E E E V E E E E E G V
151 ----+----*----+----*----+----*----+----*----+----* 200
msj07117 1 .................................................. 1
sh00869 151 TGTTCTGGACCAGTGGCATGAGCAGGTCCAGCTGGGACAACATGGACTAT 200
F W T S G M S R S S W D N M D Y
201 ----+----*----+----*----+----*----+----*----+----* 250
msj07117 1 .................................................. 1
sh00869 201 GTGTGGGAGGAGGAGGACGAGGAGGAAGACCTGGACTACTACTTGGGGGA 250
V W E E E D E E E D L D Y Y L G D
251 ----+----*----+----*----+----*----+----*----+----* 300
D V A D L R G E D E D E E E E V
msj07117 1 ...GGATGTGGCGGACCTGAGAGGGGAAGATGAGGACGAGGAGGAGGAAG 47
||| | || ||||||||| ||||| |||||||| || ||||||||||
sh00869 251 CATGGAGGAGGAGGACCTGAGGGGGGAGGATGAGGAGGACGAGGAGGAAG 300
M E E E D L R G E D E E D E E E V
301 ----+----*----+----*----+----*----+----*----+----* 350
L E E D E E E E L D P I T Q L P
msj07117 48 TGCTGGAGGAAGACGAGGAAGAGGAGCTAGACCCGATCACCCAACTGCCG 97
|||||||||| | ||||||||||| |||||||| |||||| ||||||
sh00869 301 TGCTGGAGGAGGTTGAGGAAGAGGATCTAGACCCCGTCACCCCACTGCCC 350
L E E V E E E D L D P V T P L P
351 ----+----*----+----*----+----*----+----*----+----* 400
P P P A P R R C F T C P Q C R K S
msj07117 98 CCACCTCCAGCCCCTCGGAGATGCTTCACTTGTCCCCAGTGTCGAAAAAG 147
|| ||||||||||||||||| |||||||| || || ||||| ||||| ||
sh00869 351 CCGCCTCCAGCCCCTCGGAGGTGCTTCACATGCCCTCAGTGCCGAAAGAG 400
P P P A P R R C F T C P Q C R K S
401 ----+----*----+----*----+----*----+----*----+----* 450
F P R R S F R P N L Q L A N M V Q
msj07117 148 TTTTCCTCGGCGGAGCTTCCGCCCCAACCTGCAGTTGGCCAACATGGTCC 197
||||||||||||||||||||||||||||||||| ||||||| |||||||
sh00869 401 CTTTCCTCGGCGGAGCTTCCGCCCCAACCTGCAGCTGGCCAATATGGTCC 450
F P R R S F R P N L Q L A N M V Q
451 ----+----*----+----*----+----*----+----*----+----* 500
V I R Q M H P T P G R G S R V N
msj07117 198 AGGTGATCCGTCAGATGCACCCAACTCCTGGGCGAGGGAGCCGTGTGAAT 247
||||||| || |||||||||||||| ||||| ||||||||||| ||||
sh00869 451 AGGTGATTCGGCAGATGCACCCAACCCCTGGTCGAGGGAGCCGCGTGACC 500
V I R Q M H P T P G R G S R V T
501 ----+----*----+----*----+----*----+----*----+----* 550
E Q G I C P R H Q E A L K L F C E
msj07117 248 GAACAAGGCATCTGTCCGAGACATCAAGAAGCCCTGAAGCTGTTCTGTGA 297
|| || ||||||||||| | ||| ||||||||||||||||| ||||| ||
sh00869 501 GATCAGGGCATCTGTCCCAAACACCAAGAAGCCCTGAAGCTCTTCTGCGA 550
D Q G I C P K H Q E A L K L F C E
551 ----+----*----+----*----+----*----+----*----+----* 600
V D E E A I C V V C R E S R S H K
msj07117 298 GGTGGATGAAGAAGCCATCTGTGTGGTGTGCCGCGAATCCAGGAGCCACA 347
||| || ||||| |||||||||||||||||||| ||||||||||||||||
sh00869 551 GGTAGACGAAGAGGCCATCTGTGTGGTGTGCCGAGAATCCAGGAGCCACA 600
V D E E A I C V V C R E S R S H K
601 ----+----*----+----*----+----*----+----*----+----* 650
Q H S V V P L E E V V Q E Y K A
msj07117 348 AACAGCATAGTGTGGTGCCATTGGAGGAGGTAGTGCAGGAGTACAAGGCC 397
||||||| || |||||||||||||||||||| ||||||||||||||||||
sh00869 601 AACAGCACAGCGTGGTGCCATTGGAGGAGGTGGTGCAGGAGTACAAGGCC 650
Q H S V V P L E E V V Q E Y K A
651 ----+----*----+----*----+----*----+----*----+----* 700
K L Q G H V E P L R K H L E A V Q
msj07117 398 AAGCTACAAGGGCATGTGGAACCACTTAGGAAGCATCTAGAGGCTGTGCA 447
|| || || ||||| ||||||||||| |||||||| || ||||| |||||
sh00869 651 AAACTGCAGGGGCACGTGGAACCACTGAGGAAGCACCTGGAGGCAGTGCA 700
K L Q G H V E P L R K H L E A V Q
701 ----+----*----+----*----+----*----+----*----+----* 750
K M K A K E E R R V T E L -
msj07117 448 GAAGATGAAGGCCAAGGAGGAGAGGCGGGTGACAGAGCTGA......... 488
||||||||| ||||||||||||||||| |||||||| ||||
sh00869 701 GAAGATGAAAGCCAAGGAGGAGAGGCGAGTGACAGAACTGAAGGTGGGTG 750
K M K A K E E R R V T E L K V G E
751 ----+----*----+----*----+----*----+----*----+----* 800
msj07117 489 .................................................. 489
sh00869 751 AATGTTCTCGACGGGGCTGATGGGCAGTACAGTCGAGGCAAGGAAGGTAG 800
C S R R G *
801 ----+----*----+----*----+----*----+----*----+----* 850
msj07117 489 .................................................. 489
sh00869 801 GGCTTCCCACTCTCACAGGGAGTGACTTGGTCCCCTGAGGAGGGGACAGC 850
851 ----+----*----+----*----+----*----+----*----+----* 900
msj07117 489 .................................................. 489
sh00869 851 TAAGGCCTGGGAGAGGGGTAGATGCTTTCCCTAGGTGCTGAGGAGAGCGG 900
901 ----+----*----+----*----+----*----+----*----+----* 950
msj07117 489 .................................................. 489
sh00869 901 GGCCTTAGAGAATCAGGAGGCATGTTCATTCCTGGTTCCAAAATGGAGTG 950
951 ----+----*----+----*----+----*----+----*----+----* 1000
msj07117 489 .................................................. 489
sh00869 951 GAAACTGAGGCCTGGATTGGAGGGCCTAGGTGCCTGGCCCAAGGCTGCAG 1000
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msj07117 489 .................................................. 489
sh00869 1001 AACAGGCTTTCTACCCGACACCAGAGCCTGAAGGGGGCAAAGCAAAACCC 1050
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msj07117 489 .................................................. 489
sh00869 1051 ACATAGCAGCCATCAGAGAAGCTGCCGGCCCCAGGATCCATGCAGGCACT 1100
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msj07117 489 .................................................. 489
sh00869 1101 GGGCAGAGCAGCCCTAAGCATGAGGCGGACACTGTCCTGGGACACTTGCT 1150
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msj07117 489 .................................................. 489
sh00869 1151 GTGTCCTGAGAGGGGGCCAGTGTGTTTAAGCTGGGGCAGGATTTAGTGTA 1200
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msj07117 489 .................................................. 489
sh00869 1201 TGTTAGCACTGCAGAGACCTAATATTTCCTAGTCTAGTGTTTTCTCAGCA 1250
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msj07117 489 .................................................. 489
sh00869 1251 CACCCCGACCCCCCCGCTTTTTTTGTTGTTTTTTTCCATTATTGCTCGCC 1300
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msj07117 489 .................................................. 489
sh00869 1301 CTTCTCCAAGGAGTCTTTTAAGATACATTTTCCATCCCCACCTCCCGCCT 1350
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msj07117 489 .................................................. 489
sh00869 1351 GTTTTCATAACCCCAGCAGGTCCTGCTGGGATGGGCTGGCACTGTGAGCT 1400
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msj07117 489 .................................................. 489
sh00869 1401 TCATAGACCAAGCCAGGACCTCCCCTTCTGTCCCTCTTCCCTCCTCCCTT 1450
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msj07117 489 .................................................. 489
sh00869 1451 CCCAGCCAGTGCCTGGGCCTTGCCACTACCCAGGGCCCATGCTCACTGCC 1500
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msj07117 489 .................................................. 489
sh00869 1501 ACCTGAACGTTAGGGACTCTGCTGCTGGCGACTGCTAGGCACTGAATGGT 1550
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msj07117 489 .................................................. 489
sh00869 1551 AGGATCTGTCTGGGAGTAGGAAGTCATCGTGCTTCTGGCCAGCTGCCCAA 1600
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msj07117 489 .................................................. 489
sh00869 1601 GTTGATACTTTTGGGCTCTCCTGGGTATAGAGGTAACAGGAGCTGTGTGC 1650
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msj07117 489 .................................................. 489
sh00869 1651 CCCTGGCATAGAGTGAAGCTGACTGTGGCGGCTGTTCCCTCACGCGTCTG 1700
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msj07117 489 .................................................. 489
sh00869 1701 GTCAGTTGGGACCCTCCTCTGGCCTGCTGCTCACAGCGTCTGCAGCCGAT 1750
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msj07117 489 .................................................. 489
sh00869 1751 GGTAGCTGTGTGAAAAGTGTGCCTACCACCCAGGAAGGGCCATCCCTGGC 1800
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msj07117 489 .................................................. 489
sh00869 1801 AAATAGGGTGGGACTGGGCAGGAGTTTTTTTTCTGTTACAGGATATTAAG 1850
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msj07117 489 .................................................. 489
sh00869 1851 TCCCTACATAATATCCTTGATTTTTGCCTCTTAGCCCACAAAGCATAAAA 1900
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msj07117 489 .................................................. 489
sh00869 1901 ATACTTACTATCTGGACCTTCACAGAAAAAGTTTTTCCGAGTTCTGATCT 1950
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msj07117 489 .................................................. 489
sh00869 1951 GGGGCTTTTGGGTGACTTTCTTAAGGTCACTGTGTTTAATGGCGTCGGGA 2000
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msj07117 489 .................................................. 489
sh00869 2001 CCCTAACTTCATGTTTTGATTCCTGAATTCTTTTATTTATTCATTTCAAA 2050
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msj07117 489 .................................................. 489
sh00869 2051 AATTTTTACCAGGTGCCTACTCTGATTGGTACTATGTCAGGGTCCGAGGA 2100
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msj07117 489 .................................................. 489
sh00869 2101 CCCTGGCAAACAAAGACATTCCTAGTCCCTGTCAGTGGGAGCTCATGGTA 2150
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msj07117 489 .................................................. 489
sh00869 2151 CAGTGGGGGAAAGGATGTTAACAGTTACGTCATTTAAACACAACGTTTCA 2200
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msj07117 489 .................................................. 489
sh00869 2201 ATATTATATGTGCCACAGAGAGATACAGTGATATTTGTGGGGATGGTCCC 2250
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msj07117 489 .................................................. 489
sh00869 2251 GATTTAGATCTGGAGAGGAGGGAAGGCTTGTCTTGGAATATTTAAGGTTG 2300
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msj07117 489 .................................................. 489
sh00869 2301 GACCTGAAGGATGAGTCAACTTAGGTAGAGTCAGGTGGAGAGGAGTGTTC 2350
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msj07117 489 .................................................. 489
sh00869 2351 CAGGCAGAGGTTAGTGAGTTTGAGACCACTGTGCTGGGAGCAAGGGGGTG 2400
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msj07117 489 .................................................. 489
sh00869 2401 GTATCTGGTAAGGCTGGTAGGGGATGAGCCTCTTTCCGGGACTATCTTGG 2450
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msj07117 489 .................................................. 489
sh00869 2451 ACCTGGGGAGTGTAGGGCTCCTTTGCCTTGCATTGAGAAGTAGTAGTTGC 2500
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msj07117 489 .................................................. 489
sh00869 2501 AAAACTGGAGGTTATCTTCGTACGTGTTGAGGTGGTGTCTGCCATCCCCT 2550
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msj07117 489 ............AGAGCCAGATGAAGTCAGAGCTGGCAGCTGTGGCCTCA 526
|||||||||||||||||||||||||||| ||||||||
sh00869 2551 TTGCACCATTCCAGAGCCAGATGAAGTCAGAGCTGGCAGCGGTGGCCTCG 2600
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msj07117 527 GAGTTTGGGCGGCTAACAAGGTTTCTGGCTGAAGAGCAGGCAGGATTAGA 576
||||||||||| || ||| ||||||||||||||||||||||||| | ||
sh00869 2601 GAGTTTGGGCGACTGACACGGTTTCTGGCTGAAGAGCAGGCAGGGCTGGA 2650
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msj07117 577 GAGGCGCCTCCGGGAGATGCACGAAGCTCAGTTAGGACGTGCGGGAGCAG 626
|||| ||| | |||||||| ||||| ||| | || ||||||||||| |
sh00869 2651 ACGGCGTCTCAGAGAGATGCATGAAGCCCAGCTGGGGCGTGCGGGAGCCG 2700
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msj07117 627 CAGCCAACCGCCTTGAAGAGCAGGCTGCCCAGCTGAGCCGCTTGCTTGCT 676
| || ||||||| ||| ||||| |||||||| |||||| |||| ||
sh00869 2701 CGGCTGGTCGCCTTGCAGAACAGGCCGCCCAGCTCAGCCGCCTGCTGGCA 2750
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msj07117 677 GAAGCCCAAGAACGGAGCCAACAGGGGGGCCTGCGGCTACT......... 717
|| ||||| || |||||||| |||||||| || ||||| ||
sh00869 2751 GAGGCCCAGGAGCGGAGCCAGCAGGGGGGTCTCCGGCTGCTCCAGGTGAG 2800
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msj07117 718 .................................................. 718
sh00869 2801 CAATGTCCCCTCCCTGTTCCCCCAGCATTCTGTGTTGGCTGTCAGGCAGT 2850
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msj07117 718 .................................................. 718
sh00869 2851 GCTTACCAAACGCCTGTCCAGAGCTGCCTCTTTTCTCCCTGGGAGGAACC 2900
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msj07117 718 .................................................. 718
sh00869 2901 CACAGTGATTGAACCTGAAGACCAAAAACATGTTTTAAAGCTGGAAACAG 2950
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msj07117 718 .................................................. 718
sh00869 2951 AGTTAATGTCGAATGTGGTATGTGTGGCGATTATACCCAGTGAAAAGCAT 3000
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msj07117 718 .................................................. 718
sh00869 3001 GAAGATTCGGTTGTAGGAGAGGTTTAAATGACAGTTGAGGAAAGTCTTTT 3050
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msj07117 718 .................................................. 718
sh00869 3051 TGACAGTGACATCCTGAAAAAGGTGAGCAAGTCGTATTGTGGAAATGACA 3100
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msj07117 718 .................................................. 718
sh00869 3101 GTATCCCTGGGCTCACAGCAGGATGAGGCGAGTTAGGTATGGCGAGGCAT 3150
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msj07117 718 .................................................. 718
sh00869 3151 GGGGTGGTTGAAATGGATGTGTGTTCATTGAGGGCCGTGAGGGTGCTGCT 3200
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msj07117 718 .................................................. 718
sh00869 3201 TCTCCCTTCCTGCTCAGGTTCAGTCTCTGACTGGAGATCGGGGAACGCTG 3250
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msj07117 718 .................................................. 718
sh00869 3251 TCCCTGTGCAGCTGACACTCTCTTTATCTCTTTCTCCCTCTCCCTCTTTT 3300
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msj07117 718 ..............GCAAGACATCAAGGAGACTTTCAAT........... 742
|| |||||||||||||||||||||
sh00869 3301 TGTTTCTCTTATTCCCAGGACATCAAGGAGACTTTCAATAGGTGTGTTCC 3350
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msj07117 743 .................................................. 743
sh00869 3351 CAGTCTTTGCCCTTCGTGACCCAGTGGCATCTGGTTCCCTGTCCCTGCTT 3400
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msj07117 743 .................................................. 743
sh00869 3401 CTCTTCGGTATCCCTCTCCTCTCCTTCCTTCCCCAGGACCTGAGTTTCCA 3450
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msj07117 743 .................................................. 743
sh00869 3451 TCTCCTGGACCCTCCTCTCCTTCCCCTCAGCTTTTGCTTTTCCCTCTGGG 3500
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msj07117 743 .......................................AGGTGTGAAGA 753
|||||||||||
sh00869 3501 AATATCGTGGTCCCACCCCCTGCCCGGTCCCCTTCCTCCAGGTGTGAAGA 3550
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msj07117 754 GATACAGTTGCAGCCCCCAGAGATTTGGTCCCCTGACCCATGCCAACCCC 803
| ||||| |||||||||||||| | |||||||||||||| ||||||||||
sh00869 3551 GGTACAGCTGCAGCCCCCAGAGGTCTGGTCCCCTGACCCGTGCCAACCCC 3600
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msj07117 804 ATAGCCACGACTTCCTGACAGACGCCATCGTGAGGAAAATGAGCCGCATG 853
||||||| |||||||||||||| ||||||||||||||||||||||| |||
sh00869 3601 ATAGCCATGACTTCCTGACAGATGCCATCGTGAGGAAAATGAGCCGGATG 3650
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msj07117 854 TTTTGTCAGGCTGCAAG................................. 870
|| ||||||||||| ||
sh00869 3651 TTCTGTCAGGCTGCGAGAGGTAGGGAGGTCACCTCCACGACCTTCCTTTG 3700
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msj07117 871 .................................................. 871
sh00869 3701 CCTTTCCCTTCACAGACCTGAGACTGGGTCCTGAGGGAAGTTGGGCCCCA 3750
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msj07117 871 .................................................. 871
sh00869 3751 GGGAAACTGTGGGGCTTGAGATGGAGCAGGATCCAGGCAGCCACTCTGAG 3800
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msj07117 871 .................................................. 871
sh00869 3801 GTTGAGGTTTCAAGCCATGAGCAGGTAGACCTAGTGCAGGCAGGCCTGGA 3850
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msj07117 871 .................................................. 871
sh00869 3851 GGGTGGGGTGGGGTGGAGTGGCAGGAAGAGCCAGGCTGGGGGAAGACCTG 3900
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msj07117 871 .................................................. 871
sh00869 3901 TCAGGTATCCTAGGAACAAGAGTGAGGAGCAAGATGAGCCTGCAGGAATC 3950
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msj07117 871 .................................................. 871
sh00869 3951 TGAGGCTGGCCTCTGGGATGGTGTGGGGAGCTGGATTCAGGGAGAAAGGG 4000
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msj07117 871 .................................................. 871
sh00869 4001 GGCCCAATCTGTGGAGTTGGCTGCTGACAGGGGAACAGCCGTTCCAGCCC 4050
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msj07117 871 ...........................AGTGGACCTGACACTGGACCCTG 893
|||||||||||| ||||||||||
sh00869 4051 TGGCGTATTTGTCCTCCCTCCCTCCCAAGTGGACCTGACGCTGGACCCTG 4100
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msj07117 894 ACACAGCTCACCCAGCTCTGCTGCTGTCCCCTGATCGCCGTGGAGTCCGC 943
|||| |||||||| || ||| ||||||||||||| ||||| || ||||||
sh00869 4101 ACACGGCTCACCCGGCCCTGATGCTGTCCCCTGACCGCCGGGGGGTCCGC 4150
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msj07117 944 TTGGCAGAACGTCGGCAGGAGGTTCCTGAACATTCCAAGCGCTTCTCAGC 993
||||||| || |||||||||||| |||| ||| ||||||||||||| ||
sh00869 4151 CTGGCAGAGCGGCGGCAGGAGGTTGCTGACCATCCCAAGCGCTTCTCGGC 4200
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msj07117 994 TGACTGCTGTGTACTAGGGGCCCAGGGCTTCCGCTCTGGCCGGCACTACT 1043
|||||||| ||||| |||||||||||||||||||| |||||||||||||
sh00869 4201 CGACTGCTGCGTACTGGGGGCCCAGGGCTTCCGCTCCGGCCGGCACTACT 4250
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msj07117 1044 GGGAGGTAGAGGTGGGTGGGAGGCGAGGCTGGGCAGTGGGTGCTGCCCGT 1093
|||||||||||||||| ||| |||| |||||||| |||||||||||||||
sh00869 4251 GGGAGGTAGAGGTGGGCGGGCGGCGGGGCTGGGCGGTGGGTGCTGCCCGT 4300
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msj07117 1094 GAATCAACCCATCATAAAGAAAAAGTGGGCTCTGGGGGGTCCTCTGTTAG 1143
||||||||||||||||| ||||| |||||| ||||||| ||||| || |
sh00869 4301 GAATCAACCCATCATAAGGAAAAGGTGGGCCCTGGGGGTTCCTCCGTGGG 4350
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msj07117 1144 CAGTGGGGATGCCAGCTCCTCACGCCATCATCATCGCCGCCGCCGGCTCC 1193
||| ||||||||||||||||| |||||||| |||||||||||||||||||
sh00869 4351 CAGCGGGGATGCCAGCTCCTCGCGCCATCACCATCGCCGCCGCCGGCTCC 4400
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msj07117 1194 ATCTGCCTCAGCAGCTCCTACTCCAGCGCGAAGTGTGGTGTGTGGGCACC 1243
| ||||| ||||||| ||| |||||||| ||||||||||| |||||||||
sh00869 4401 ACCTGCCCCAGCAGCCCCTGCTCCAGCGGGAAGTGTGGTGCGTGGGCACC 4450
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msj07117 1244 CACGGCAAACGATACCAGGCACAGAGCTCAACAGAGCAGACACTGCTCAG 1293
|||||||||| || ||||| |||||||| ||||| ||||| ||||| ||
sh00869 4451 AACGGCAAACGCTATCAGGCCCAGAGCTCCACAGAACAGACGCTGCTGAG 4500
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msj07117 1294 CCCATGTGAGAAACCACGGCGCTTTGGCGTATACCTGGACTATGAGGCTG 1343
||| ||||||||||| |||||||||| || |||||||||||||| ||||
sh00869 4501 CCCCAGTGAGAAACCAAGGCGCTTTGGTGTGTACCTGGACTATGAAGCTG 4550
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msj07117 1344 GGCGCCTAGGCTTCTACAATGCGGATACCTTAGCCCATGTGCACACCTTC 1393
||||||| ||||||||||| || || || ||||||| ||||||||||||
sh00869 4551 GGCGCCTGGGCTTCTACAACGCAGAGACTCTAGCCCACGTGCACACCTTC 4600
4601 ----+----*----+----*----+----*----+----*----+----* 4650
msj07117 1394 TCAGCTGCCTTCCTTGGCGAGCGTGTTTTCCCTTTTTTCCGGGTACTTTC 1443
|| ||||||||||| ||||||||||| || ||||| |||||||| || ||
sh00869 4601 TCGGCTGCCTTCCTGGGCGAGCGTGTCTTTCCTTTCTTCCGGGTGCTCTC 4650
4651 ----+----*----+----*----+----*----+----*----+----* 4700
msj07117 1444 CAAGGGTACCCGAATCAAGCTCTGCCCTTGATCAGCCTGCCACCCGCAGG 1493
|||||| ||||| ||||||||||||||||||| | |||||||||||||||
sh00869 4651 CAAGGGCACCCGCATCAAGCTCTGCCCTTGATTATCCTGCCACCCGCAGG 4700
4701 ----+----*----+----*----+----*----+----*----+----* 4750
msj07117 1494 GGCCCCTCTGGTCACCACTGGGGGGGCGGGTGGTGGTGGATGGTTGCCCA 1543
||||||||| |||| |||| |||||| ||||||||| || ||| | |
sh00869 4701 GGCCCCTCT.GTCAGCACTTGGGGGGTGGGTGGTGGAGGGTGG.CCCGTA 4748
4751 ----+----*----+----*----+----*----+----*----+----* 4800
msj07117 1544 CTGTTTTGGGAGCCTGGATTCCTCCCACTGTTTGTTACTGAGTTGCTTCC 1593
|| ||| | | || |||||||| ||||||||| |||||||||
sh00869 4749 AGTTTGAGGGCTCAAAGGCTCTTCCCACTGCTTGTTACTGTGTTGCTTCC 4798
4801 ----+----*----+----*----+----*----+----*----+----* 4850
msj07117 1594 TGCTCCCTCTTGAACCCAGG...CTGCTTCTCCCTCTAGGAGTCAAAAAG 1640
||||| ||||| |||||| ||||||||||||||||||| | |||
sh00869 4799 CACTCCCCCTTGACCCCAGGCCCCTGCTTCTCCCTCTAGGAGCCTAAAGA 4848
4851 ----+----*----+----*----+----*----+----*----+----* 4900
msj07117 1641 ACCTCCTAGACTCCTCCAGCTCAGTCCTTCCTCACCTACTTTGTCTG... 1687
|| ||| |||||||||||| | | |||||||||| ||||||
sh00869 4849 AC..CCTCCTGGCCTCCAGCTCAGCCTTCTCTCACCTACTATGTCTGTCC 4896
4901 ----+----*----+----*----+----*----+----*----+----* 4950
msj07117 1688 .ACAGGTCTGCATGGGTCCCTGATAA..CCAACAGCTGCCTG..ATGACC 1732
||||||||||||||||||||||||| |||||||||||| | |
sh00869 4897 AACAGGTCTGCATGGGTCCCTGATAATGAGAACAGCTGCCTGGTCTTCTC 4946
4951 ----+----*----+----*----+----*----+----*----+----* 5000
msj07117 1733 TCCCCTCCCGCCTAGCTCAGCTCT..................GGGGATGT 1764
|||| | ||||||| |||| || |||||||
sh00869 4947 TCCCAGTCTGCCTAGCCCAGCCCTGGGACTGGAATTTGAGTAGGGGATGA 4996
5001 ----+----*----+----*----+----*----+----*----+----* 5050
msj07117 1765 GTGGAGA........TAATTCCTCAACTTTCCTTTTTCACCCCC...... 1800
| ||| | | |||||| ||||| | ||| | ||||
sh00869 4997 GGGGAAATTGTAATTTCATTCCTTAACTTCCTTTTCCCCACCCCTGCTCT 5046
5051 ----+----*----+----*----+----*----+----*----+----* 5100
msj07117 1801 .................................................. 1801
sh00869 5047 TCAACCTCTTTATCAGTTCTGAGGCTGGAGGGTTTGGGCAAGGCAACATC 5096
5101 ----+----*----+----*----+----*----+----*----+----* 5150
msj07117 1801 ..........CTCCATGTTTTGGTGCAAGCTTCAGCTAAGAGCTTTAGGA 1840
||||| || || |||| || |||| || | ||| | |
sh00869 5097 CCCATTCCAATTCCATTTTCTGATGCAGATTTTAGCTGAGGGATTTGGAA 5146
5151 ----+----*----+----*----+----*----+----*----+----* 5200
msj07117 1841 GCTGTCTAGGCAATCAGGCTGGGCAAAAGGGTAGAGCTGTG...TAAGTC 1887
|| | | || | |||||||||| |||||||||||||| | ||| |
sh00869 5147 GCCATTTGGGGAGGCAGGCTGGGCCAAAGGGTAGAGCTGGGTAATAAATG 5196
5201 ----+----*----+----*----+----*----+----*----+----* 5250
msj07117 1888 TACTTTTTCTTGGGGAAGTAGGAACACTAAAGCTTTCCTTCCACCCCCCA 1937
| || || ||||| || ||| | ||||| |||||||||| || ||
sh00869 5197 TCTATTCTCCTGGGG.AGGAGGGATTCTAAA.CTTTCCTTCC.GTCCTCA 5243
5251 ----+----*----+----*----+----*----+----*----+----* 5300
msj07117 1938 ATTTCTACCTCCATAGACTGGCCAGAATTTAGCTTC.....AGTGAGATC 1982
|||||||||||||||||| ||||||||||||||||| || ||||||
sh00869 5244 ATTTCTACCTCCATAGACCGGCCAGAATTTAGCTTCACTTGAGAGAGATC 5293
5301 ----+----*----+----*----+----*----+----*----+----* 5350
msj07117 1983 TGAGATGGTCAGCATGA.........................CACCACAT 2007
|| |||||| ||||| || ||||
sh00869 5294 TGGAATGGTCGCCATGATTGAAACCACGCACCATTACATCATCATTACAT 5343
5351 ----+----*----+----*----+----*----+----*----+----* 5400
msj07117 2008 ACATTA...CCCAATAAATTATTT.............TCTCTCTGCATCT 2041
|||| | ||||||||||| | | | |||
sh00869 5344 TAATTACATCAACATAAATTATTTCTTCCCCCTTCCCTTTTCCAGCACTC 5393
5401 ----+----*----+----*----+----*----+----*----+----* 5450
msj07117 2042 TATGTAGGAGCCTAAGTCTTC.........................TTCT 2066
| |||||| | || || ||
sh00869 5394 AACCAAGGAGCAAAGCTCATCCCACCCCACACCCCTCCCAGGTCTGCTCA 5443
5451 ----+----*----+----*----+----*----+----*----+----* 5500
msj07117 2067 CTGTCAGGCTCTTATTCAGAAGTTTCTG...................... 2094
||| ||||||| | | | ||| |
sh00869 5444 CTGCCAGGCTCCTCTCCCCTTTGTTCAGTGGAGCTGGCTTTTCTCCCAGC 5493
5501 ----+----*----+----*----+----*----+----*----+----* 5550
msj07117 2095 GCCTCTCCATGCCTTTTATTTCCACTTGGTAAGCCCTGTTAGGGAGCTTG 2144
||| ||||||||||| | |||| |||| |||| ||| |||||| ||
sh00869 5494 CCCTTTCCATGCCTTTCA.CTCCATTTGGCAAGCTCTGAGGGGGAGCCTG 5542
5551 ----+----*----+----*----+----*----+----*----+----* 5600
msj07117 2145 AGACAGGGGTCTGGATCCTCG..GGAGACCACTGGGTATAATCTATTTTT 2192
| ||| | || || | ||||| | ||||||||||||||||||
sh00869 5543 GGGACGGGTTTGGGTCCCCAGGAGGAGAGCCTTGGGTATAATCTATTTTT 5592
5601 ----+----*----+----*----+----*----+----*----+----* 5650
msj07117 2193 CTAGTAACCCCTTGCCTTCTGACACTAAACAGCTTTTGTCCTCTGCTTTG 2242
|||| | || |||||||| | || ||||||| | |||||||||||
sh00869 5593 CTAGGAGCCTCTTGCCTTGTCAC...TTGCAGCTTTCGCCCTCTGCTTTG 5639
5651 ----+----*----+----*----+----*----+----*----+----* 5700
msj07117 2243 GTGGCTGAGGTCAACTCATGTTC.TTGGGGAAAGGTGGGTTGTGTTGCAA 2291
|||||||||| ||||||||||| ||||| ||||| | ||| ||
sh00869 5640 ATGGCTGAGGTGAACTCATGTTCTTTGGGAAAAGGGAAGGCGTGCTGTGG 5689
5701 ----+----*----+----*----+ 5725
msj07117 2292 AAATAAAAAAAAGTGTTTATTTGC. 2315
|||||||| |||||||||||
sh00869 5690 AAATAAAA.....TGTTTATTTGCT 5709