Comparison of KIAA cDNA sequences between mouse and human (KIAA0831)

<< Original sequence data >>

mouse  mKIAA0831 (msj06319)     length:   2493 bp
human   KIAA0831  (hj04502)     length:   4943 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      558       484       74      13.26
  Total:      558       484       74      13.26

  3'UTR:     1933      1263      670      34.66

amino acid

  CDS1 :      186       175       11       5.91
  Total:      186       175       11       5.91
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse     1 -   561      1 -   561      1 -   187
         human  1156 -  1716    496 -  1716    221 -   407
  3'UTR: mouse   562 -  2493
         human  1717 -  4943
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             1 L  G  Y  A  T  Q  L  V  N  I  V  S  H  I  L  D  I  17
msj06319     1 CTGGGCTACGCCACGCAGCTCGTCAACATTGTGTCTCACATACTTGACAT 50
               ||| |||| || || ||||| ||||||||| ||||||| ||||||||  |
hj04502   1156 CTGTGCTATGCAACTCAGCTGGTCAACATTCTGTCTCATATACTTGATGT 1205
           221 L  C  Y  A  T  Q  L  V  N  I  L  S  H  I  L  D  V  237

            51 ----+----*----+----*----+----*----+----*----+----* 100
            18  N  L  P  K  K  L  C  N  S  E  F  C  G  E  N  L  S 34
msj06319    51 CAATCTTCCCAAAAAGCTGTGCAACAGCGAGTTCTGTGGCGAAAACCTCA 100
                ||||||||||||||||| |||||||| || || ||||||||||| || |
hj04502   1206 AAATCTTCCCAAAAAGCTCTGCAACAGTGAATTTTGTGGCGAAAATCTAA 1255
           238  N  L  P  K  K  L  C  N  S  E  F  C  G  E  N  L  S 254

           101 ----+----*----+----*----+----*----+----*----+----* 150
            35   K  Q  K  L  T  R  A  V  R  K  L  N  A  N  I  L   50
msj06319   101 GCAAGCAGAAACTGACACGCGCAGTGAGGAAACTGAACGCAAACATCCTT 150
               ||||||||||| | || || ||||||| ||||||||| ||||| || |||
hj04502   1256 GCAAGCAGAAATTTACTCGAGCAGTGAAGAAACTGAATGCAAATATTCTT 1305
           255   K  Q  K  F  T  R  A  V  K  K  L  N  A  N  I  L   270

           151 ----+----*----+----*----+----*----+----*----+----* 200
            51 Y  L  C  S  S  Q  H  V  N  L  D  Q  L  Q  P  L  H  67
msj06319   151 TACCTTTGTTCTTCTCAGCATGTAAATCTGGATCAGTTGCAGCCACTGCA 200
               |||||||||| |||||||||||||||| | ||||| || || ||||||||
hj04502   1306 TACCTTTGTTTTTCTCAGCATGTAAATTTAGATCAATTACAACCACTGCA 1355
           271 Y  L  C  F  S  Q  H  V  N  L  D  Q  L  Q  P  L  H  287

           201 ----+----*----+----*----+----*----+----*----+----* 250
            68  T  L  R  N  L  M  H  L  V  S  P  R  S  E  H  L  G 84
msj06319   201 CACACTCAGGAACCTGATGCACTTGGTCAGCCCGCGCTCTGAGCACCTAG 250
                || |||||||| || ||| || ||||||| ||  ||||||| |||||||
hj04502   1356 TACCCTCAGGAATCTAATGTACCTGGTCAGTCCAAGCTCTGAACACCTAG 1405
           288  T  L  R  N  L  M  Y  L  V  S  P  S  S  E  H  L  G 304

           251 ----+----*----+----*----+----*----+----*----+----* 300
            85   R  S  G  P  F  E  V  R  A  D  L  E  E  S  M  E   100
msj06319   251 GCAGGTCAGGACCCTTTGAAGTTCGAGCAGACCTCGAGGAGTCCATGGAA 300
               |||||||||| ||||||||||| ||||||||||| |||||||||||||||
hj04502   1406 GCAGGTCAGGGCCCTTTGAAGTACGAGCAGACCTTGAGGAGTCCATGGAA 1455
           305   R  S  G  P  F  E  V  R  A  D  L  E  E  S  M  E   320

           301 ----+----*----+----*----+----*----+----*----+----* 350
           101 F  V  D  P  G  V  A  G  E  S  D  A  S  G  D  E  R  117
msj06319   301 TTTGTGGACCCTGGAGTTGCTGGAGAATCAGACGCGAGTGGAGATGAGCG 350
               |||||||| || |||||||||||||||||||| | ||| |||||||||||
hj04502   1456 TTTGTGGATCCCGGAGTTGCTGGAGAATCAGATGAGAGCGGAGATGAGCG 1505
           321 F  V  D  P  G  V  A  G  E  S  D  E  S  G  D  E  R  337

           351 ----+----*----+----*----+----*----+----*----+----* 400
           118  V  S  D  E  E  T  D  L  G  T  D  W  E  N  L  P  S 134
msj06319   351 TGTAAGCGATGAGGAGACTGACCTGGGCACAGACTGGGAGAACCTGCCAA 400
                || |||||||| || || |||||||||||||||||||||||| |||| |
hj04502   1506 CGTCAGCGATGAAGAAACCGACCTGGGCACAGACTGGGAGAACTTGCCTA 1555
           338  V  S  D  E  E  T  D  L  G  T  D  W  E  N  L  P  S 354

           401 ----+----*----+----*----+----*----+----*----+----* 450
           135   P  R  F  C  D  I  P  S  Q  P  V  E  V  S  Q  S   150
msj06319   401 GCCCCCGATTCTGTGACATCCCTTCCCAGCCGGTGGAAGTGTCCCAGAGC 450
               | ||||| || ||||| |||||||||||| | |||||||| |||||||| 
hj04502   1556 GTCCCCGGTTTTGTGATATCCCTTCCCAGTCTGTGGAAGTCTCCCAGAGT 1605
           355   P  R  F  C  D  I  P  S  Q  S  V  E  V  S  Q  S   370

           451 ----+----*----+----*----+----*----+----*----+----* 500
           151 Q  S  T  Q  V  S  P  P  I  A  S  S  S  A  G  G  M  167
msj06319   451 CAGAGCACCCAGGTGTCCCCACCCATTGCCAGCAGCAGCGCTGGTGGGAT 500
               ||||||||||||| |||||||||||| || |||||||| || ||||||||
hj04502   1606 CAGAGCACCCAGGCGTCCCCACCCATCGCGAGCAGCAGTGCAGGTGGGAT 1655
           371 Q  S  T  Q  A  S  P  P  I  A  S  S  S  A  G  G  M  387

           501 ----+----*----+----*----+----*----+----*----+----* 550
           168  I  S  S  A  A  A  S  V  T  S  W  F  K  A  Y  T  G 184
msj06319   501 GATCTCCTCCGCTGCGGCCTCGGTGACCTCTTGGTTCAAAGCTTACACTG 550
               ||||||||| || || |||||||||||||| ||||| |||||||||||||
hj04502   1656 GATCTCCTCTGCAGCAGCCTCGGTGACCTCCTGGTTTAAAGCTTACACTG 1705
           388  I  S  S  A  A  A  S  V  T  S  W  F  K  A  Y  T  G 404

           551 ----+----*- 561
           185   H  R  *   187
msj06319   551 GACACCGCTAA 561
               ||||||| |||
hj04502   1706 GACACCGTTAA 1716
           405   H  R  *   407


*--[ 3'UTR ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
msj06319   562 CGAGTTGGGACCAAAA.ATGCTGATTTTGTGTC...TCAGAGTCTTTCCC 607
               ||||   ||||||||| || |  | | ||  ||     ||    | ||||
hj04502   1717 CGAGCATGGACCAAAACATACCAAATCTGCATCAAGAAAGTTCTTCTCCC 1766

            51 ----+----*----+----*----+----*----+----*----+----* 100
msj06319   608 ACTGCACTCTCAT.AACCTTGTCTGTGT.AGTTGCGATAGAGCTTGGAA. 654
               ||| ||||||  | ||| || ||||| | ||||  ||||| |  ||||| 
hj04502   1767 ACTACACTCTAGTAAACATTTTCTGTTTAAGTTAAGATAGTGTCTGGAAC 1816

           101 ----+----*----+----*----+----*----+----*----+----* 150
msj06319   655 .................................................. 655
                                                                 
hj04502   1817 AAAGAGGTTAAAGTGTTGTTTTGTTTTGTCTTTTTAAGCAGGGAGACAAA 1866

           151 ----+----*----+----*----+----*----+----*----+----* 200
msj06319   655 .................................................. 655
                                                                 
hj04502   1867 CATTTCTATTTGCCAAGTGGCCTGTGATGGTGACCAACATGCTTATGATA 1916

           201 ----+----*----+----*----+----*----+----*----+----* 250
msj06319   655 ..........................................GCTATCGC 662
                                                         |||   | 
hj04502   1917 ATTAAGAGAACAGGGGTCGAAGGTCTTTCTACCCAGACCAGTGCTGGTGG 1966

           251 ----+----*----+----*----+----*----+----*----+----* 300
msj06319   663 CAGGACAAGATTAGTGTCAGGGC........................... 685
                ||||  |  |  | ||  || |                           
hj04502   1967 AAGGAGGACCTGTGCGTGTGGCCAGTTCTGCCAAGGAAGCAGTTGATTTG 2016

           301 ----+----*----+----*----+----*----+----*----+----* 350
msj06319   686 ........CTGAGCTCGGGGCTCCTGGGCCCAGG....TCCTCAGTATGC 723
                       ||| || |||| | || || ||   |       ||||| |||
hj04502   2017 GGTTCCCTCTGGGCCCGGGCCACCGGGCCCACAGATATGGGTCAGTGTGC 2066

           351 ----+----*----+----*----+----*----+----*----+----* 400
msj06319   724 TGGTTCCTG.GGTGC..AGAGTCTCCCTGACAC..TAAGTCCTAGGCTTT 768
               |||| | || |||||  ||| | | ||||||||  |||||  |||   ||
hj04502   2067 TGGTCCTTGCGGTGCTGAGACTGTTCCTGACACTTTAAGTTTTAGAGGTT 2116

           401 ----+----*----+----*----+----*----+----*----+----* 450
msj06319   769 GATCAGATCACAAAGAAGTGTTTCTTGGTAATGAGGA.ATGAAAGACAAA 817
               | |   ||||| |||| ||| |||||| | || |||| |||||||| |||
hj04502   2117 GGTTGAATCAC.AAGAGGTGATTCTTGATTATTAGGACATGAAAGATAAA 2165

           451 ----+----*----+----*----+----*----+----*----+----* 500
msj06319   818 GGCTGAGT.....TTGTTTTTCTGTCATCCTCTTGAG.AGACCAGCCAGC 861
                |||   |       ||||||||| |||  | ||  | |    | |||||
hj04502   2166 AGCTCTTTAATAAGAGTTTTTCTGCCATTGTTTTTTGTATGAGAACCAGC 2215

           501 ----+----*----+----*----+----*----+----*----+----* 550
msj06319   862 AGGCCAGCAGCAGTTTGGCCTCATCCGGGAGAGGTGGTTGTCTGGGGAAG 911
               |||| |     | |||   || ||  ||         ||   | |||| |
hj04502   2216 AGGCAATTTAAAATTT...CTAATTTGGTCCTTTGATTTTGTTTGGGAGG 2262

           551 ----+----*----+----*----+----*----+----*----+----* 600
msj06319   912 GAGGAAATGAAAGCTTATTGCT.......GTCAGTCATTGTGCGTC..AC 952
               |  ||  |  | |  | ||  |        || ||| | ||  |||  ||
hj04502   2263 GGTGAGTTACACGTATTTTATTCATGCTGCTCTGTCGTAGTTTGTCAGAC 2312

           601 ----+----*----+----*----+----*----+----*----+----* 650
msj06319   953 ATTCCTGATTTCCT....ACTACACACCAAAGAAACCAAATTCTTTATTT 998
               ||||||| ||| ||     | ||||||||||||||   ||    || || 
hj04502   2313 ATTCCTGTTTTTCTTTCCCCCACACACCAAAGAAAATGAAAGTCTTTTTC 2362

           651 ----+----*----+----*----+----*----+----*----+----* 700
msj06319   999 CTGTAGACCCATATCTGCGAATGGGGAGTCTGCTGG.........GATGG 1039
                |   |||||| |||    |||||      | ||||           |  
hj04502   2363 TTTAGGACCCACATCCATAAATGGAAGAAATCCTGGCTGCAATAATGTCT 2412

           701 ----+----*----+----*----+----*----+----*----+----* 750
msj06319  1040 TTAGATGTCTAAACAGTTCTCTTGTATTCTGAAGGGAGATAA........ 1081
                 |||  | | |||  || ||||||||||||| ||||  |||        
hj04502   2413 AGAGAGTTTTTAACTATTTTCTTGTATTCTGAGGGGAATTAAGCTTATTC 2462

           751 ----+----*----+----*----+----*----+----*----+----* 800
msj06319  1082 .........................................GTCATTGGA 1090
                                                        |  |||| |
hj04502   2463 TTACCTAGTTGAATTCCTGCCATCCACACTATGAGCATTTTGAAATTGAA 2512

           801 ----+----*----+----*----+----*----+----*----+----* 850
msj06319  1091 ATTGTCTGTACTACACTCACTTCCTCCATCA.......TTCCCTGGATGG 1133
                || | | | ||      |  |    ||| |       | || |   |  
hj04502   2513 CTTATATTTTCTGGGTGAAAATAAGTCATGAAGGTCATTCCCTTATGTAA 2562

           851 ----+----*----+----*----+----*----+----*----+----* 900
msj06319  1134 GCTAAATGCTACCCGAGCGTTGGCTGAACACTTA...............T 1168
               ||| |||||   ||  |     |  ||| |   |               |
hj04502   2563 GCTCAATGCCTGCCTGGGCACAGGGGAAAAGCCACTTAGTTAAGTGGCCT 2612

           901 ----+----*----+----*----+----*----+----*----+----* 950
msj06319  1169 GTGGTCACTCGCTTGCTGTCCGGTTTCTTCCTTGGTGGTGGTGGTGGGGT 1218
                |||||| ||   || |||||  |||||| ||  | | | | |  |    
hj04502   2613 CTGGTCATTCTTGTGGTGTCCACTTTCTTTCTATGGGATTGAGTAG.... 2658

           951 ----+----*----+----*----+----*----+----*----+----* 1000
msj06319  1219 TAACTAGTAGCAGGTGTTTCCA.GGGAACTCTTCCTTCTTGTT..CCTGA 1265
                     || |||||||||| || |||||  | |||| ||||||  || ||
hj04502   2659 ......GTGGCAGGTGTTTTCAGGGGAAACCATCCTACTTGTTTCCCCGA 2702

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
msj06319  1266 GGTCTTCTTGTCCCTGGGGTCTCTG......................... 1290
                 ||||  |  | ||| || | | |                         
hj04502   2703 ACTCTTTGTTGCTCTGAGGACACAGCTTTGCTCAGAAATGCAGCGCAGAT 2752

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
msj06319  1291 ..........................AGACTGAAGACAGCACCTTATGCA 1314
                                            |||  || |||||  |||  |
hj04502   2753 CCTTACGGCTGATGCTACTCTGCTCTGTTCTGGGGAAAGCACAATATAAA 2802

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
msj06319  1315 GAGTGTAGCGCGGAGCAGCTGTCCCAGGAAATGCTCAGCTATCAAGGGAT 1364
               ||  | |   |  ||| |    |   ||       | |  |||  || | 
hj04502   2803 GAAAGAATTTCCCAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCGGCAC 2852

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
msj06319  1365 TT................................................ 1366
               ||                                                
hj04502   2853 TTTGGGAGGCCGAGGCAGGCGGATCACTTGAGGTCAGGAGTTTGAGAGCA 2902

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
msj06319  1367 .................................................. 1367
                                                                 
hj04502   2903 GCCTGGCTAACATGGTGAAACCCTGTTTCTGCTAGAAGTGCAGAAAATTA 2952

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
msj06319  1367 .................................................. 1367
                                                                 
hj04502   2953 CCGGGTGTGGTGGCGCACGCCTGTAATCCCAGCTACTCGGGAGGCTGCGG 3002

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
msj06319  1367 .................................................. 1367
                                                                 
hj04502   3003 CGGGAGAATCGCTTGAACCGGGAGGCGGAGGTTGCAGTGAGCCGAGATTG 3052

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
msj06319  1367 .................................................. 1367
                                                                 
hj04502   3053 TGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAGGCTCCGTCTCAAAAA 3102

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
msj06319  1367 ........................................CCTCAGAGGT 1376
                                                       | |     ||
hj04502   3103 AAAAAAGAATTTCCCTCAGCAGGAGATCATTTTCAGCTCACGTGTCTTGT 3152

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
msj06319  1377 CATTC...TAATGACAATCTTA.TAGAAAGCTATAAAAAGAGAGGCATTA 1422
               |||||   || |||||||||||  ||||| ||||||  ||||||||||||
hj04502   3153 CATTCTTTTAGTGACAATCTTACAAGAAAACTATAATGAGAGAGGCATTA 3202

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
msj06319  1423 TGTTCAAGTCATAAGGAGTTCTTTTTTTATTTTTAGTAACTTCAAAAAGG 1472
               ||| ||      ||   ||   |  |||||||||| ||||| ||||||  
hj04502   3203 TGTACA......AATATGTAAGTAGTTTATTTTTAATAACTGCAAAAATA 3246

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
msj06319  1473 AAGTTCTGTGTAACAGACTCCTGCAGTCCTGTGAGAAAGCACCCCCCTCC 1522
                  |       |||   |    | | |||| ||| | ||       |   
hj04502   3247 TCCTATGTAACAACTACCAAAAGAAATCCTATGAAAGAG......TCCTA 3290

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
msj06319  1523 CCTGGCCTTGTCACCATATCCTCCTGTTGTGACTGGTGTGATGGTACCTC 1572
                | ||| || | |||||||    ||  ||||| |||  |||| | |||||
hj04502   3291 ACAGGCATTATTACCATAT....CTTATGTGATTGGCATGATAGCACCTC 3336

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
msj06319  1573 AGCCAGGTCCTTCAGCAGCCTGCCACGCCCTGGCTTCTGT.....TGACT 1617
                |  |  || |||||  |  ||||| ||||  |||||| |     | |  
hj04502   3337 TGATAAATCATTCAGAGGTTTGCCATGCCCCAGCTTCTTTTCTCATCATA 3386

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
msj06319  1618 CACACTGTGGTTGGTACTTTGCCTGC.AGATTGAGGTGCTGTGGCGCTTT 1666
                  | ||| |||| |||||||||| | ||   |||||||| |   |||||
hj04502   3387 ATAATTGTAGTTGATACTTTGCCTCCAAGTCCGAGGTGCTATATAGCTTT 3436

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
msj06319  1667 GGC.........................AGTTAT...TAGAAGTGTAGGA 1688
                ||                         |||| |   ||||  || || |
hj04502   3437 TGCTAATGGTATATTTGGTGTTTTGTATAGTTTTGGGTAGAGTTGCAGAA 3486

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
msj06319  1689 AGGACTTCA.TCCTGCCCAGGTTCCCCATGTTCCCAAGCTCTAGATACCC 1737
                ||| || | | ||  || |    | ||  ||||   ||||||   |   
hj04502   3487 CGGAGTTTATTTCTATCCGGTAGTCACAAATTCCTTGGCTCTATGAATTT 3536

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
msj06319  1738 AGCTGTGGAGCAGG.................................... 1751
                 |     || |||                                    
hj04502   3537 TCCATGAAAGGAGGAAGTAGGCTTTTCTCGTTGTGGGTGGTCTTTTTTTT 3586

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
msj06319  1752 ..............................CGGCTGGAGTCTG....... 1764
                                              ||||||||| ||       
hj04502   3587 TTTTGGAGACGGAGTCTCGCTCAGCTGCCCAGGCTGGAGTGTGGTGGCGC 3636

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
msj06319  1765 .................................................. 1765
                                                                 
hj04502   3637 CATCTCCGCTCGCTGCAACCACCATCTCCTGGGTTCAGGCGATTCTTCCG 3686

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
msj06319  1765 .................................................. 1765
                                                                 
hj04502   3687 TCTCAGCCTCCCGAGTAGCTGGGATTATAGGCACCTGCCATCATGCCCAG 3736

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
msj06319  1765 .................................................. 1765
                                                                 
hj04502   3737 CTAATTTTTGTATTTTGGTAGAGACGGGGGTTTTCACCATGTTGGCCAGG 3786

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
msj06319  1765 .................................................. 1765
                                                                 
hj04502   3787 CTGGTCTTGAACTCCTGGCTTCGGGTGATCCGCTTGCCTTGGCCTCCTAG 3836

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
msj06319  1765 .................................................. 1765
                                                                 
hj04502   3837 GGTGCTGGGATTGCAGGCCTGAGCCACCGCGCCCGGCCCCTTATGGGTTC 3886

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
msj06319  1765 ........................TTCTGTGCTCAGC....TCTGCGACT 1786
                                       ||  |||||||||    |    || |
hj04502   3887 TTCTACACTGCTGGGATCTCTGTTTTAAGTGCTCAGCTTCATGATTGATT 3936

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
msj06319  1787 GCTGGGCTCGTGTTTTACCACCTACTTCT..AGGACTTACAGACTGAGTG 1834
               ||||||||    |||| ||| | | ||||  ||  | || ||| |||   
hj04502   3937 GCTGGGCTTCCATTTTCCCATCCAGTTCTGGAGTTCGTAGAGAGTGAAGA 3986

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
msj06319  1835 CGCT.............................................. 1838
                | |                                              
hj04502   3987 TGGTAGACTTGAACAGATAAATAAACTTAACGATCTTGTAAGAGTTGTCT 4036

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
msj06319  1839 .................................................. 1839
                                                                 
hj04502   4037 AGCTACTTAAAACCCTCAGAAGTAAGAGCTTAGTCTCACGAGTTGTAAGA 4086

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
msj06319  1839 .................................................. 1839
                                                                 
hj04502   4087 GTGGGATTTGGAGCTTGGTGGTGGAGACTGACTTCAGCTGAGAGATGCAC 4136

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
msj06319  1839 ...........................................GGGAGGA 1845
                                                          | || ||
hj04502   4137 AACAGTCATGGTTTTCTTAAGCCTCTTATGAAACCATGAATGAGAGATGA 4186

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
msj06319  1846 AGCTACAGAA...AGTGCAGAGGCCACCAACTACCGCCTACAGCAATTTA 1892
               ||||| ||||   | | |||||  ||| ||||  |  ||| || | ||  
hj04502   4187 AGCTAAAGAATAGAATCCAGAGATCACAAACT..CATCTAGAGTACTTCC 4234

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
msj06319  1893 ACCACATTTGCAGAAAGCACGGGGCTGGGCGG..............CCTT 1928
               || | |||| || | |    ||  ||    ||                ||
hj04502   4235 ACAAAATTTACAAAGATGTGGGAACTTTATGGATAGGATATATTTTGTTT 4284

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
msj06319  1929 GTTTTATTTCATATCAATCAGAGGCACTTT...........TGTCATCGT 1967
               ||| |  || |||||||  |||||||||||            || |||| 
hj04502   4285 GTTGTTGTTAATATCAACTAGAGGCACTTTACATAGGGTTAAGTGATCGA 4334

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
msj06319  1968 CCCTCACATTAAGTGACCAGCACGGAC.....TGCCTAGGCTGCTCAAAT 2012
                || |   |   ||    | |||  ||      || ||  ||||| ||||
hj04502   4335 ACC.CTTTTGTGGTTTTGAACACCAACATACTGGCTTACACTGCTGAAAT 4383

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
msj06319  2013 CCTTGGGGTTTTGTTATTTTGCACTGGATCCACCTGTTGTAAATAGTCTT 2062
                 || ||||||  |||||||||||||||||||||   |||||||| ||||
hj04502   4384 ATTTTGGGTTTCATTATTTTGCACTGGATCCACC..CTGTAAATACTCTT 4431

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
msj06319  2063 AAATACACATTTCAACCACTGTTTGGTTCCTACACTCTTTGCTGCTCATT 2112
               || || ||||||||||||||||||  || |||| || |||||||||||||
hj04502   4432 AAGTATACATTTCAACCACTGTTT..TTTCTACTCTTTTTGCTGCTCATT 4479

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
msj06319  2113 AAAACTTTTTGTGTAGGTGTCAGAACCGTACACAAACAGCTTTCTAGAAA 2162
               ||||  |||  |||||||| ||||||| ||   |||||||||| |     
hj04502   4480 AAAATCTTTCATGTAGGTGCCAGAACCATATGTAAACAGCTTTTT..... 4524

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
msj06319  2163 AAAAAAATGAAGCTGGTGTTTTGTTTTTTTTTTTTTAAACCGAAAGCCAT 2212
               |||||| |||||||||| |||||          |||||||  ||||||||
hj04502   4525 AAAAAATTGAAGCTGGTATTTTG..........TTTAAACAAAAAGCCAT 4564

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
msj06319  2213 AGAAGTTGATCATGTTTTCCATTTAAAAATGATTTCTTGGAACAAGGTAA 2262
               |||| ||| ||||||||||||||| ||||||||||  || ||||| ||||
hj04502   4565 AGAACTTGGTCATGTTTTCCATTTTAAAATGATTTACTGAAACAAAGTAA 4614

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
msj06319  2263 TACTAATAGACACTCAGAGGCACCACACGGGCTGCTTTACATGGTCTTAC 2312
               |||||||| | || || |||||||| || |||||||| | |||||||   
hj04502   4615 TACTAATAAAAACCCACAGGCACCAAACAGGCTGCTTAAAATGGTCTGTT 4664

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
msj06319  2313 GTAG..................AACCAAGAAATGTAACTTACCATGGTAT 2344
                 ||                  |   |||||| ||     ||    ||| 
hj04502   4665 AAAGACATTTTTTGGTTATGGAATATAAGAAAAGTTTTGCACATCTGTAA 4714

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
msj06319  2345 GGGGG............TCAGCATTGGGTGGGGTTCAGGTGTGCATTGGG 2382
               |||||            ||| |||||||| | ||  | | |     ||  
hj04502   4715 GGGGGAAAAACAGTATATCACCATTGGGTAGAGTGGACGGGACTCATGTA 4764

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
msj06319  2383 AAAGCTGCAACGTCAGAA................................ 2400
               |   ||  |      |||                                
hj04502   4765 AGGACTCAATTTGGGGAAGAGCATTCAGTGGCATGCTGTTAGAGGACTAG 4814

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
msj06319  2401 .......................................CCCCCTTGCTG 2411
                                                      |||| ||||| 
hj04502   4815 TGTCCGAGAATCTCCTCACAGTATCATGTTGCAGGAATTCCCCATTGCT. 4863

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
msj06319  2412 CGACTGAAACTTCCAGGTCAGGTTGA.TCACACAGATGTTTTCTAAACCT 2460
                  ||| ||||||||   ||| |||| ||| ||| ||||||||||||| |
hj04502   4864 ...CTGCAACTTCCAAACCAGTTTGAGTCATACAAATGTTTTCTAAACTT 4910

          3251 ----+----*----+----*----+----*--- 3283
msj06319  2461 TTGTTGTATTACTGCAATAAATCCTTTAACAGT 2493
               || |||||||||||||||||||| |||||||||
hj04502   4911 TTATTGTATTACTGCAATAAATCTTTTAACAGT 4943