Comparison of KIAA cDNA sequences between mouse and human (FLJ00373)
<<Original sequence data>>
mouse mFLJ00373 (msj06275) length: 1778 bp, CDS: 1 - 1617
human (sh07162) length: 5519 bp, CDS: 472 - 816
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 12 - 491 184 270 59.5
CDS: 492 - 852 145 196 57.5
3'UTR: 853 - 4096 621 313 33.5
amino acid
CDS: 492 - 852 14 101 87.8
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msj06275 1 ...........GAACTTATGGTGGAGCTTCCTTGGAACAAAAGTACAACT 39
| | || | || | | || ||
sh07162 1 ACTTGAGGTCAGGAGTTTGAGACCAGTCTGGCCAACATGGTGAGACCACA 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msj06275 40 GATCGCCTGGACATTCGGGCAGCCCGGATTCTTCTGGACAATG...ACCA 86
|| | | || | | | | | ||| | || ||
sh07162 51 TCTCTACAAAAAATACAAAAATTAGCGGGTGTGGTGGCCTGTGTGCGCCC 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msj06275 87 TTATGCCATGGAAAAACTGAAGAGGAGGGTTTTGGAATACTTGGCTGTGA 136
|| | | | || | |||| | | |||||
sh07162 101 ATAGTACCAGCCACTTGGGAGGCAGAGGCAGGAGAATCACTTGAAGCCAG 150
151 ----+----*----+----*----+----*----+----*----+----* 200
msj06275 137 GACAACTGAAAAATAACTTGAAGGGCCCAATCCTCTGTTTTGTTGGCCCG 186
|| | | | | | | ||| | | | | |
sh07162 151 GA....GGCAGAGTTTTCAGTGAGCTGAAATTGTGTCACTGTACTTCAAG 196
201 ----+----*----+----*----+----*----+----*----+----* 250
msj06275 187 CCTGGAGTAGGCAAAACAAGTGTGGGGAGATCCGTGGCCAAGACTCTGGG 236
||||| | | | | ||| | || | |
sh07162 197 CCTGGGCAATGGAGTGAGACTGTCTCAAAATATATATATATTTGCAGCCC 246
251 ----+----*----+----*----+----*----+----*----+----* 300
msj06275 237 TCGGGAGTTCCACAGGATTGCACTTGGGGGTGTGTGTGACCAGTCTGACA 286
|| | | || || ||| |||| | | || |
sh07162 247 AATAAAGATACTTAG.ATAAAACTATTGGGTTTAT.......TCCTTGAA 288
301 ----+----*----+----*----+----*----+----*----+----* 350
msj06275 287 TTCGAGGGCACAGGCGGACCTATGTGGGCAGTATGCCTGGTCGTATCATC 336
| |||||| | | || ||| || || |
sh07162 289 AACTAGGGCATGTGTAGCTAGATCTGGCTCATAAAAAGCAAAGTTATTTA 338
351 ----+----*----+----*----+----*----+----*----+----* 400
msj06275 337 AATGGCTTGAAGACCGTTGGGGTTAACAATCCAGTGTTCCTATTGGATGA 386
|| || || ||| || || || | | | ||
sh07162 339 CATATATT........TTAAGGTAAAATTGCCTCTGATAAATGTCAAAGA 380
401 ----+----*----+----*----+----*----+----*----+----* 450
msj06275 387 GGTTGACAAG.........CTGGGGAAAAGCCTGCAGGGGGATCCTGCAG 427
|| | || |||| |||||| | | | ||| |
sh07162 381 GGAAGTTTAGGTCTTTCTTCTGGCAGAAAGCCAGAGAGTAAGTGCTGAAT 430
451 ----+----*----+----*----+----*----+----*----+----* 500
L H R
msj06275 428 CTG.CGCTGCTTGAGGTGTTGGATCCTGAACAAAACCATAACTTCACAGA 476
|| ||| | | | || | | | | || ||| | |
sh07162 431 GTGACGCAGAATCATGTTAGGTAACAAGGACTTTGAGGTAAGTGGCTGAA 480
V A E
501 ----+----*----+----*----+----*----+----*----+----* 550
S L S K C G F D L S Q V L F -
msj06275 477 TCACTATCTAAATGTGGC.....CTTTGACCTTTCCCAAGTTCTTTTCA. 520
| | | | || ||| | || || |||
sh07162 481 GTCTTCTGTGGAGTCAGCCGACTCTTGCAGGATTGTGTGGTATCAGTCAC 530
V F C G V S R L L Q D C V V S V T
551 ----+----*----+----*----+----*----+----*----+----* 600
S N C Q H H C Y Y S T C L
msj06275 521 ...TAGCAACTGCCAACACCACTGCTACTATTCCACCTGCTTTGCTGGAC 567
||||| ||||||| | ||| | |||| | | |
sh07162 531 CTTTAGCATTTGCCAACCCAACTCTGATCATTCTTCTTCTT......... 571
F S I C Q P N S D H S S S F
601 ----+----*----+----*----+----*----+----*----+----* 650
E I I Q S R V H T G G E D R
msj06275 568 AGGATGGAGATCATTCAG.GTTCCAGGGTACACACAGGAGGAGAAGATAG 616
| || | |||| ||| || | || || | || |
sh07162 572 ....TCAAGGTATCTCAGCGTTTGAGTCAGCCAGGAGTAGCAATAGGTTT 617
K V S Q R L S Q P G V A I G L
651 ----+----*----+----*----+----*----+----*----+----* 700
D C P Q A P V P K Q L E Q H G L
msj06275 617 AGATTGCCCACAGGCACCTGATCCCTAAGCAGCTGGAGCAGCACGGTCTG 666
| ||| | | | || | | | | | || |||
sh07162 618 GGCTTGGACTCCCTTAGGTG.GAGAAATCATGTTCGTGGAGGCGAGTCGA 666
A W T P L G G E I M F V E A S R
701 ----+----*----+----*----+----*----+----*----+----* 750
T P Q Q I Q I P Q H T T L A I I T
msj06275 667 ACTCCTCAGCAGATTCAGATCCCCCAGCACACCACTCTGGCCATCATTAC 716
| | || ||| | | | | | | || | | | |
sh07162 667 ATGGATGGCGAGGGCCAGTTAACTCTGACCGGCCAGCTCGGGGACGTGAT 716
M D G E G Q L T L T G Q L G D V M
751 ----+----*----+----*----+----*----+----*----+----* 800
R Y T R E A G V R S L D - K V W G
msj06275 717 CAGATACACCAGAGAAGCAGGAGTCCGTTCTCTGGACAG.AAAGTTTGGG 765
| | || | | || | | || ||| || | |
sh07162 717 GAAGGAGTCCGCCCACCTCGCTATCAGCTGGCTCCGCAGCAACGCAAAGA 766
K E S A H L A I S W L R S N A K K
801 ----+----*----+----*----+----*----+----*----+----* 850
Y L P C C G R K L Q K A S I R K
msj06275 766 GCTATTTGCCGTGCTGTGGCAGTGAAAGTTGCAGAAGGCCAGCATAAGGA 815
|| || | | ||| | | | |||| |||||| |
sh07162 767 AGTACCAGCTGACCAATGGTA..GGAGCCTGCACCCGGCCAGGCAGGCGT 814
Y Q L T N G R S L H P A R Q A *
851 ----+----*----+----*----+----*----+----*----+----* 900
msj06275 816 AGCCAAGCTGGACCGTTCGGATGTGGCTGATGGAGAAGGTTGCAAAGAAC 865
|| || || | |||| || | |
sh07162 815 GACCCAGGAGGCGGTACCTTCCATGGCGGA.............GACTGGC 851
901 ----+----*----+----*----+----*----+----*----+----* 950
msj06275 866 ATGTGCTGGAAGATGCAAAACCTGAATCCATCAGTGACACTGCAGACTTG 915
||| ||| || ||| | ||| | || | | | |||
sh07162 852 ATGAGCTCGAGACTGCCAGTTACACATCTAGCAAAGTACACACCGTTTTG 901
951 ----+----*----+----*----+----*----+----*----+----* 1000
msj06275 916 GCCCTGCCACCTGAAATGCCAATTCTGATCGACTCCCATGCCCTGAAAGA 965
|| || ||||| | | | |||||| | ||
sh07162 902 AACC..CCTGTGGAAATCCTAGT..........TCCCATTTCAGGACTAT 939
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msj06275 966 CATCCTGGGGCCACCACTGTA....TGAGCTGGAGGTATCTGAGCGTTTG 1011
|| | ||| ||| | | |||| | | |||
sh07162 940 TTGACTAGTGCCTGAACTAGAAACTAATTCAAAAGGTTTATTTTGTTTTA 989
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msj06275 1012 AGTCAACCTGGAGTGGCAATAGGGTTAGCATGGACTCCCTTGGGTGGCAA 1061
| | || | |||| | | | | | || |||| ||
sh07162 990 ATACGACTTAGAGTAGAATGGAACTGTTCTTCCACACCCT.......CAC 1032
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msj06275 1062 AATCATGTTTGTGGAAGCAAGTAGAATGGACGGTGAAGGCCAACTAACAC 1111
|| | || | | || || | | | | ||
sh07162 1033 CCAAATTGTACTGTCCACCAATATTTTGAAGAATTCATTTACCCAAAACA 1082
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msj06275 1112 TGACCGGCCAGCTTGGGGACGTCATGAAGGAGTCTGCCCATCTCGCCATT 1161
| | | | | ||||| | | |
sh07162 1083 TTCATTTTTGTTTGTGACTTTTTTTTTAGGAGAAAAAGAAAACAGGTTTA 1132
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msj06275 1162 AGCTGGCTTCGAAGCAATGCAAAGAAATACCACCTGACTAATGCTTTTGG 1211
| | || | || || | ||| ||| ||||||||
sh07162 1133 ATTTTTCTAC......ATTAAAGTCCCTTTTTCCTTTTTAAAGCTTTTGG 1176
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msj06275 1212 AAGTTTTGATCTTCTTGACAACACAGACATCCATCTGCACTTCCCAGCTG 1261
||||||||||||||||||||||||||||||||||||||||||||||||||
sh07162 1177 AAGTTTTGATCTTCTTGACAACACAGACATCCATCTGCACTTCCCAGCTG 1226
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msj06275 1262 GAGCTGTCACAAAAGATGGACCATCTGCTGGTGTTACCATAGTAACTTGT 1311
||||||||||||||||||||||||||||||| |||||||||||||| |||
sh07162 1227 GAGCTGTCACAAAAGATGGACCATCTGCTGGAGTTACCATAGTAACCTGT 1276
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msj06275 1312 CTCGCCTCACTTTTCAGTGGGCGGCTTGTGCGCTCAGATGTAGCCATGAC 1361
|||||||||||||| ||||||||||| || || |||||||||||||||||
sh07162 1277 CTCGCCTCACTTTTTAGTGGGCGGCTGGTACGTTCAGATGTAGCCATGAC 1326
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msj06275 1362 TGGGGAAATTACGCTGAGAGGGCTTGTTCTTCCA................ 1395
||| |||||||| |||||||| ||||||||||||
sh07162 1327 TGGAGAAATTACACTGAGAGGTCTTGTTCTTCCAGTAAGTATGAAAAAAC 1376
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msj06275 1396 .................................................. 1396
sh07162 1377 AATTTATATGGTTATTTTTTATTTAATTTTTGAAAATTAATATTATTTTT 1426
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msj06275 1396 .................................................. 1396
sh07162 1427 AAATACGGGTTTGCCTTCTTTCTATGAAAACCTTGGTTTTAAGTATATAT 1476
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msj06275 1396 .................................................. 1396
sh07162 1477 TATATTTTTATGCCTGTAACTAATTCATATTTTAAAATTTTGATCAAATA 1526
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msj06275 1396 .................................................. 1396
sh07162 1527 AAAGAAAAACTGACAATTTTTCACATTTTCCTTTTTTTTTTTTTTTTTTT 1576
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msj06275 1396 .................................................. 1396
sh07162 1577 TTTGAAATAGACAGGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGTG 1626
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msj06275 1396 .................................................. 1396
sh07162 1627 TGACTGTAGCTCACTATAGCCACCAAGTCCTGGGCTCAAGCGATCCTCCT 1676
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msj06275 1396 .................................................. 1396
sh07162 1677 GTCTGTCTCCCGAATAGCTGGGACTATAGGAGCACGCCACCATGCTCAGC 1726
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msj06275 1396 .................................................. 1396
sh07162 1727 TAATTTATTTTATTTTGCGTAGAGACAGGGTCTCTCTGTGTTGTCCAGGC 1776
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msj06275 1396 .................................................. 1396
sh07162 1777 TTGTCTCAAACTCCAGGTCTCATGCAGTCCTCTCATCTCCACCTCCCAAA 1826
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msj06275 1396 .................................................. 1396
sh07162 1827 GTGCTGGGATTACAGGCGTGAGCCACCACATTCAGCCCACGTTTCCCATT 1876
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msj06275 1396 .................................................. 1396
sh07162 1877 CTAAGATTTGCTAAGGGAAAAAAATATTAGTGTGGTCATCAGAAATATTG 1926
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msj06275 1396 .................................................. 1396
sh07162 1927 GCAGTTACATGAAAATTTGAGGCCTTGTTCTACTTGACAAATTGTTAAAG 1976
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msj06275 1396 .................................................. 1396
sh07162 1977 ATATAGCACATGTGCAAAATGGGATAGTAGTTGTTTTTAAGCTTTAAGCC 2026
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msj06275 1396 .................................................. 1396
sh07162 2027 CATTTCTTAAATTTGAAGTTTCTTTGAGACCTCCTGTCCCCCTGCAGAAA 2076
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msj06275 1396 .................................................. 1396
sh07162 2077 ACTTTGCTAGTATAGAATGGAAACTCTAATAAAGATTAACCATATCTAAT 2126
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msj06275 1396 .................................................. 1396
sh07162 2127 GACTACATTTTGAAAAGGTTCTATACATGTGGGGTCTTGAGGCTCCAGAT 2176
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msj06275 1396 .................................................. 1396
sh07162 2177 CCTAAACTGCTTATAAAAATAGTGTGATAAAATGTACAGAACTTGAGAGT 2226
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msj06275 1396 .................................................. 1396
sh07162 2227 ATTTAAAGTTGTTAGTTGAGTATTAGTCTACAACAGACTAGACTACAATT 2276
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msj06275 1396 .................................................. 1396
sh07162 2277 TTAGTCCACAACAAGATTTTGGCAGGTTCATAGCAAGATGAGGAAAAAAA 2326
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msj06275 1396 .................................................. 1396
sh07162 2327 AAAAGAAATAGTCTTTTTTTCTTTTTTTCTATCAAGATTGTGCCACTGCA 2376
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msj06275 1396 .................................................. 1396
sh07162 2377 CTCTAGCTTGGGTGACAGAGTAAGACTGTCTCAAAAAAAAAAAAAAATAG 2426
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msj06275 1396 .................................................. 1396
sh07162 2427 TAATGAAAGCTGTGAGGGAAAATGTTTTACATCTAGTCTTGTATACATGG 2476
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msj06275 1396 .................................................. 1396
sh07162 2477 CCTTAGTATCAATCAAGTGTGAAAGTAAAATATTTTCAAACATGCAAGGA 2526
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msj06275 1396 .................................................. 1396
sh07162 2527 ATCAGTTCATCTTACACTCTTTTGAAGAAGGTACTTTGAAGGAGTACTTC 2576
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msj06275 1396 .................................................. 1396
sh07162 2577 AGCAGCATGAACAAAACCTTGAAAGAAGATGCCAGTGGGGCGGGAAGGCC 2626
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msj06275 1396 .................................................. 1396
sh07162 2627 TGGAGCAGCCAGCCAGTCTTAATTGGAGCAGATGCAACACATTACCCCAA 2676
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msj06275 1396 .................................................. 1396
sh07162 2677 AGCAAGAATACTCCATACTCTTCAAGTTCCTGTGGGCCAGGAATTCAGGA 2726
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msj06275 1396 .................................................. 1396
sh07162 2727 GAGGCTGAGCTGGGTTCTTGTGGCCCAGGGTCTCTGGCCTTACAGTCTAG 2776
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msj06275 1396 .................................................. 1396
sh07162 2777 GTTCCAGCCAGGCTGCAGTCACATGAAGGCTGACAGGCTGGAGAAACTGC 2826
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msj06275 1396 .................................................. 1396
sh07162 2827 TTCCATGGTGGTTGACTCATGTGACTGGCAAATTGGTCCCATCTAGTGGC 2876
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msj06275 1396 .................................................. 1396
sh07162 2877 AGGAGGCCCCAGTTCCTCACCTGATGGACTTGCCCATAGGCTGCTTGAGT 2926
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msj06275 1396 .................................................. 1396
sh07162 2927 GACCTCAGACATTATGACTGGCCACCTCCAGGGCAGGTGATCAAGAGAGA 2976
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msj06275 1396 .................................................. 1396
sh07162 2977 TTCAGGCAGCAGCTCTCGTTTTTTGTGACTCAGCCGTGGAGATCATACAG 3026
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msj06275 1396 .................................................. 1396
sh07162 3027 CATCACTCCCACCACACTCTGTTTCTTACCGAGTCACAAAGCCTGGCCCA 3076
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msj06275 1396 .................................................. 1396
sh07162 3077 CATTCAAGCAGGGGGACCATTGTAGACATGTTTGAAAGCCACCATAGGAG 3126
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msj06275 1396 .................................................. 1396
sh07162 3127 CCTAGTTTAGGGATACATTTTCTTCATTAACCAGCATGGAGGTTCTGGCT 3176
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msj06275 1396 .................................................. 1396
sh07162 3177 TTAAACCTGTAGAGAGGGAAGTAACCCCAGCACACAGCTAAGCTCTGCAG 3226
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msj06275 1396 .................................................. 1396
sh07162 3227 GAGCGGCGCTCATGGTCAGAATCACGTGCTGCTTTTTCAGATCAACCTAA 3276
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msj06275 1396 .................................................. 1396
sh07162 3277 AGACTAGACGGTTGTGATTACACCTGAATGCCAATTTACTTTGACAGCAT 3326
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msj06275 1396 .................................................. 1396
sh07162 3327 TTATAAAAACAATCATTGACAGAAGAGGAACTCATACCTATCAACAATTT 3376
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msj06275 1396 .................................................. 1396
sh07162 3377 AGAATCCCCCTCATCAGAGTCTTTAATATAACACCAATTGAAACATTAAA 3426
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msj06275 1396 .................................................. 1396
sh07162 3427 AAAAGGTTACTACTTATCCTTTTTCCTGGCTTTCCTAGCTCATGCTATAA 3476
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msj06275 1396 .................................................. 1396
sh07162 3477 CAAAACGGAAGATGATTTGGATGTTTTAAAATAGTAGTGGTTAAATTCAG 3526
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msj06275 1396 .................................................. 1396
sh07162 3527 TGAAAGAAAGCTGGGTCAGGGTTTCTTTCAGCTTGAGGGTGATCATTAAC 3576
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msj06275 1396 ...........................GTGGGTGGAATTAAAGACAAAGT 1418
|||||||||||||||||||||||
sh07162 3577 CCTAAAAACTTTTTTCTCTCCTTACAGGTGGGTGGAATTAAAGACAAAGT 3626
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msj06275 1419 CCTAGCAGCACACCGAGCAGGACTGAAGCAGATCATAATTCCGCAGAGGA 1468
|| || |||||| |||| ||||||||||| |||| ||||| | ||| |
sh07162 3627 GCTGGCGGCACACAGAGCGGGACTGAAGCAAGTCATTATTCCTCGGAGAA 3676
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msj06275 1469 ACGAAAAGGACCTTGAAGAGATCCCAAGCAACGTCAGACAGGATCTAAGT 1518
| ||||| |||||||| | |||||| ||||||| |||||||| |||||
sh07162 3677 ATGAAAAAGACCTTGAGGGAATCCCAGGCAACGTACGACAGGATTTAAGT 3726
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msj06275 1519 TTTGTTACAGCAAGCTGCCTGGATGAAGTTCTAAATGCAGCTTTTGATGG 1568
||||| |||||||||||||||||||| ||||| |||||||||||||||||
sh07162 3727 TTTGTCACAGCAAGCTGCCTGGATGAGGTTCTTAATGCAGCTTTTGATGG 3776
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msj06275 1569 TGGCTTTCCTGTCAAGACCAGACCTGGTCTCATTGACAGCAAACTATAGG 1618
||||||| |||||||||||||||||||||| | | |||||||| ||||
sh07162 3777 TGGCTTTACTGTCAAGACCAGACCTGGTCTGTTAAATAGCAAACTGTAGG 3826
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msj06275 1619 CCCGAACATAAGCTGAATTTAATTATGA...................... 1646
|| || | | | | |||| | |
sh07162 3827 TCCAAATCTCAATTTTTTAGAATTTTAAGTTATGAAGTGCTCAAAGGTAC 3876
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msj06275 1647 .GGCAAAGCTTGTTTGAGGCACCAAAT...GATCAAGCAAAATATCCCTA 1692
| || || | ||| | ||| || | | |||| || |||||
sh07162 3877 TGACACAGTTGATTTTATTCACACCATTAGGGGTATGCAAGATGTCCCTG 3926
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msj06275 1693 ATCTGTGGATATAATCAAGATAGCAATGAGTCTGTTTAAGTAG...TTGT 1739
| | | | ||||||| | || ||| | || ||| | |||
sh07162 3927 TTTTATAAACATAATCACAACAGTAATAAACCTCAAGTAGTGGCTAGTGT 3976
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msj06275 1740 TTATTACAGAA.......ATGTTGGCTTAATAAAGTCATTAAACCT.... 1778
||| || |||| |||||| ||| |||| | || |||
sh07162 3977 TTAGTATAGAAATATAAGATGTTGATTTAGTAAACTGATAAAAATCGAAT 4026
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msj06275 1779 .................................................. 1779
sh07162 4027 TCTTGTCTTTTTAGTGGGATCCTTACTGTCCCTGGAAAGATATAGCATAG 4076
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msj06275 1779 .................................................. 1779
sh07162 4077 TGGTTCTCAGCACAGTCTCCAGAACAGAAGCATCTGTAGTACCTGGTAAC 4126
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msj06275 1779 .................................................. 1779
sh07162 4127 TTGTTAGAAATGTACATTCTCAGGCTCCACAGCAGGCCGCCTGAATCAAA 4176
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msj06275 1779 .................................................. 1779
sh07162 4177 TCCTGGGAGGTGGGGACAGAAATCTGTGTTTTAAGAAGCCTTCCAGGTAA 4226
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msj06275 1779 .................................................. 1779
sh07162 4227 TTCTGCTGCACACTCAAGTTCAGGAACCACCGGTATAGACCATTACCTTA 4276
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msj06275 1779 .................................................. 1779
sh07162 4277 GTGGATTTACCTGTAGAGTTTATTGGATCCTGAAACCAATCAATTACTTA 4326
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msj06275 1779 .................................................. 1779
sh07162 4327 GAACTAGGCAAAGATGAAAGTATAGCCAACTATTCTTGGCTATATATATA 4376
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msj06275 1779 .................................................. 1779
sh07162 4377 TATTCAAGTGGGCCGGGCGTGATGGCTCACACCTGTAATTCCAGCACTTT 4426
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msj06275 1779 .................................................. 1779
sh07162 4427 GGGAGGTCGAGGTAGGCAGATCACCGAGCCCAAGAGTTCAAGACAATCCT 4476
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msj06275 1779 .................................................. 1779
sh07162 4477 GGCCAACGGCGAAACTCTGTCTCTACAAAAAATATACAGGCGTGTTAGCA 4526
4601 ----+----*----+----*----+----*----+----*----+----* 4650
msj06275 1779 .................................................. 1779
sh07162 4527 TGTGCCTGTAATCCCAGCTTCTTGGGAAGCTGAGGCACAAGAATTGCCTG 4576
4651 ----+----*----+----*----+----*----+----*----+----* 4700
msj06275 1779 .................................................. 1779
sh07162 4577 AACCCAGGAGGTGGAGGTTGCAGTGAGCTGGGATCGCGCCATTGCACTCC 4626
4701 ----+----*----+----*----+----*----+----*----+----* 4750
msj06275 1779 .................................................. 1779
sh07162 4627 AGCCTGGCTGACAGAGCGAGACTGTCTCTAAAAAAAAAAGACTCAAGTGG 4676
4751 ----+----*----+----*----+----*----+----*----+----* 4800
msj06275 1779 .................................................. 1779
sh07162 4677 ACCCTACAATGAAGCCTACACATCCCAATAGAAGCCCCTTCTTATGCTGA 4726
4801 ----+----*----+----*----+----*----+----*----+----* 4850
msj06275 1779 .................................................. 1779
sh07162 4727 GGGAAGCAGCCCTCAGAACATGATAGCTTGTATCCAGCAGAGTGGCACGT 4776
4851 ----+----*----+----*----+----*----+----*----+----* 4900
msj06275 1779 .................................................. 1779
sh07162 4777 GCTGGCACACCTCACAGAAGCACCCTGGCCCTGGATGCCTGCAACCTCAG 4826
4901 ----+----*----+----*----+----*----+----*----+----* 4950
msj06275 1779 .................................................. 1779
sh07162 4827 AAGAGTGCAGCTCCCAGAGGGAGGCAGCCATCCATCTGGGATGGTCCTAA 4876
4951 ----+----*----+----*----+----*----+----*----+----* 5000
msj06275 1779 .................................................. 1779
sh07162 4877 GCATGGAATCCTAACTCCTGATTCCGTCTCCTATTTCTTGCTTGGCTACG 4926
5001 ----+----*----+----*----+----*----+----*----+----* 5050
msj06275 1779 .................................................. 1779
sh07162 4927 CCAGTTCCCAAATCTGGTAGATGTCCATGCCCATGTGCTCCTGCTGGGAC 4976
5051 ----+----*----+----*----+----*----+----*----+----* 5100
msj06275 1779 .................................................. 1779
sh07162 4977 TCAATTCAGGCTATGTATGACTATGAAGTCAGGCTCATCTGCTTACTGGC 5026
5101 ----+----*----+----*----+----*----+----*----+----* 5150
msj06275 1779 .................................................. 1779
sh07162 5027 TGTGTGAACTTTTTGTATCTTGGTTTTCTTCATCCATGAAATCCAAGTAA 5076
5151 ----+----*----+----*----+----*----+----*----+----* 5200
msj06275 1779 .................................................. 1779
sh07162 5077 TACTACCTAATTGTTACTGTGGAGATTAAGTTCAAATGCAATGTATAGTA 5126
5201 ----+----*----+----*----+----*----+----*----+----* 5250
msj06275 1779 .................................................. 1779
sh07162 5127 ATATTAAGCAATTTCTAGTTATTATTCTAGCCAGTAATGGACTTCAGAAT 5176
5251 ----+----*----+----*----+----*----+----*----+----* 5300
msj06275 1779 .................................................. 1779
sh07162 5177 CTTTTATTACACAATATAAGAATATGTATGTAAAGACATTTTGGAATTTC 5226
5301 ----+----*----+----*----+----*----+----*----+----* 5350
msj06275 1779 .................................................. 1779
sh07162 5227 CTGGATGAGAAGGAAGTCTGGGCTGGGCATGGTGGCTCACGCCTGTAACC 5276
5351 ----+----*----+----*----+----*----+----*----+----* 5400
msj06275 1779 .................................................. 1779
sh07162 5277 CTAGCACTTTAGGAAATCGAGGCGAGTGGATCACTTAAGCTCAGGAGTTC 5326
5401 ----+----*----+----*----+----*----+----*----+----* 5450
msj06275 1779 .................................................. 1779
sh07162 5327 AAGGCCAGCCTGGGCAACATGGCAAAACCCCATTTCTACAAAAAATACAA 5376
5451 ----+----*----+----*----+----*----+----*----+----* 5500
msj06275 1779 .................................................. 1779
sh07162 5377 AAATTAGCTGGGCATGGTGGCACCCGCCTGTAGTCCAGCTACTTGAGGCT 5426
5501 ----+----*----+----*----+----*----+----*----+----* 5550
msj06275 1779 .................................................. 1779
sh07162 5427 GAGATGGGAGGATGAGGGAGGTCGGGGCTGCAGTGAGCCAAGATCACGCC 5476
5551 ----+----*----+----*----+----*----+----*--- 5593
msj06275 1779 ........................................... 1779
sh07162 5477 ACTGCACTCCAGCACCCTGGGCGACAGAGTGAGACCCTGTCTC 5519