# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msj06256.fasta.nr -Q ../query/mKIAA4115.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4115, 505 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7905673 sequences Expectation_n fit: rho(ln(x))= 6.4293+/-0.000206; mu= 6.9673+/- 0.011 mean_var=135.1010+/-25.574, 0's: 26 Z-trim: 82 B-trim: 0 in 0/66 Lambda= 0.110343 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|109488113|ref|XP_340803.2| PREDICTED: similar t ( 527) 3380 549.4 8.7e-154 gi|14916571|sp|P97855.1|G3BP1_MOUSE RecName: Full= ( 465) 3197 520.2 4.7e-145 gi|119582065|gb|EAW61661.1| Ras-GTPase-activating ( 473) 3021 492.2 1.3e-136 gi|119582066|gb|EAW61662.1| Ras-GTPase-activating ( 505) 3021 492.2 1.3e-136 gi|109079427|ref|XP_001110695.1| PREDICTED: Ras-GT ( 466) 3004 489.5 8.3e-136 gi|14916572|sp|Q13283.1|G3BP1_HUMAN RecName: Full= ( 466) 2998 488.5 1.6e-135 gi|54695634|gb|AAV38189.1| Ras-GTPase-activating p ( 467) 2998 488.5 1.6e-135 gi|114602975|ref|XP_001168984.1| PREDICTED: Ras-GT ( 466) 2996 488.2 2e-135 gi|122063478|sp|Q32LC7.1|G3BP1_BOVIN RecName: Full ( 465) 2994 487.9 2.5e-135 gi|75070772|sp|Q5RB87.1|G3BP1_PONAB RecName: Full= ( 466) 2993 487.7 2.8e-135 gi|55728352|emb|CAH90920.1| hypothetical protein [ ( 466) 2992 487.6 3.1e-135 gi|149726164|ref|XP_001503695.1| PREDICTED: simila ( 465) 2991 487.4 3.5e-135 gi|80478622|gb|AAI08279.1| GTPase activating prote ( 466) 2991 487.4 3.5e-135 gi|49168554|emb|CAG38772.1| G3BP [Homo sapiens] ( 466) 2988 486.9 4.9e-135 gi|57085257|ref|XP_536460.1| PREDICTED: similar to ( 465) 2986 486.6 6e-135 gi|62896771|dbj|BAD96326.1| Ras-GTPase-activating ( 466) 2978 485.4 1.5e-134 gi|109079425|ref|XP_001110776.1| PREDICTED: Ras-GT ( 446) 2810 458.6 1.6e-126 gi|126290635|ref|XP_001369530.1| PREDICTED: simila ( 466) 2809 458.4 1.8e-126 gi|114602973|ref|XP_001169085.1| PREDICTED: Ras-GT ( 446) 2802 457.3 3.9e-126 gi|109079423|ref|XP_001110658.1| PREDICTED: Ras-GT ( 476) 2800 457.0 5e-126 gi|114602991|ref|XP_001168955.1| PREDICTED: Ras-GT ( 474) 2792 455.7 1.2e-125 gi|149412590|ref|XP_001508871.1| PREDICTED: hypoth ( 461) 2671 436.5 7.5e-120 gi|224067657|ref|XP_002198527.1| PREDICTED: Ras-GT ( 472) 2645 432.3 1.3e-118 gi|53127125|emb|CAG31012.1| hypothetical protein [ ( 472) 2643 432.0 1.7e-118 gi|109079439|ref|XP_001110623.1| PREDICTED: Ras-GT ( 401) 2567 419.9 6.5e-115 gi|114602993|ref|XP_001168937.1| PREDICTED: simila ( 401) 2559 418.6 1.6e-114 gi|74200884|dbj|BAE24800.1| unnamed protein produc ( 386) 2461 403.0 7.6e-110 gi|49114974|gb|AAH72830.1| MGC80186 protein [Xenop ( 470) 2416 395.9 1.3e-107 gi|27924229|gb|AAH45051.1| G3bp-prov protein [Xeno ( 470) 2404 394.0 4.7e-107 gi|73953621|ref|XP_867372.1| PREDICTED: similar to ( 473) 2331 382.4 1.5e-103 gi|126340739|ref|XP_001367664.1| PREDICTED: simila ( 473) 2187 359.4 1.2e-96 gi|40807189|gb|AAH65323.1| GTPase activating prote ( 477) 2106 346.5 9.1e-93 gi|28279661|gb|AAH45874.1| GTPase activating prote ( 477) 2105 346.4 1e-92 gi|149052668|gb|EDM04485.1| Ras-GTPase-activating ( 298) 2005 330.3 4.5e-88 gi|109079435|ref|XP_001110590.1| PREDICTED: Ras-GT ( 409) 1942 320.4 5.9e-85 gi|49903639|gb|AAH76729.1| MGC81268 protein [Xenop ( 483) 1908 315.0 2.8e-83 gi|118090133|ref|XP_420536.2| PREDICTED: similar t ( 482) 1896 313.1 1.1e-82 gi|67968581|dbj|BAE00650.1| unnamed protein produc ( 445) 1889 312.0 2.2e-82 gi|109079431|ref|XP_001110514.1| PREDICTED: Ras-GT ( 445) 1889 312.0 2.2e-82 gi|114602985|ref|XP_001169137.1| PREDICTED: hypoth ( 445) 1888 311.8 2.4e-82 gi|224049067|ref|XP_002193829.1| PREDICTED: GTPase ( 482) 1878 310.3 7.7e-82 gi|55728996|emb|CAH91236.1| hypothetical protein [ ( 482) 1877 310.1 8.7e-82 gi|39795768|gb|AAH64172.1| GTPase activating prote ( 484) 1876 309.9 9.7e-82 gi|74001638|ref|XP_848490.1| PREDICTED: similar to ( 482) 1874 309.6 1.2e-81 gi|194209060|ref|XP_001489923.2| PREDICTED: GTPase ( 482) 1873 309.5 1.3e-81 gi|74139958|dbj|BAE31814.1| unnamed protein produc ( 550) 1872 309.4 1.6e-81 gi|74216966|dbj|BAE26595.1| unnamed protein produc ( 553) 1870 309.0 2.1e-81 gi|5805295|gb|AAD51932.1|AF145284_1 RNA-binding pr ( 482) 1866 308.3 2.9e-81 gi|109074462|ref|XP_001100686.1| PREDICTED: simila ( 482) 1866 308.3 2.9e-81 gi|74001636|ref|XP_856193.1| PREDICTED: similar to ( 483) 1866 308.3 2.9e-81 >>gi|109488113|ref|XP_340803.2| PREDICTED: similar to Ra (527 aa) initn: 3380 init1: 3380 opt: 3380 Z-score: 2917.3 bits: 549.4 E(): 8.7e-154 Smith-Waterman score: 3380; 97.822% identity (99.406% similar) in 505 aa overlap (1-505:23-527) 10 20 30 mKIAA4 RLYSGRRARVPRHRARDAATSSHVAALSSRSAAQVEPT :::::::::::::::::::::::.:::::::::::: : gi|109 MGFTSPKYTGPTLWINRSCLDTRLYSGRRARVPRHRARDAATSSHAAALSSRSAAQVEST 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA4 KAMVMEKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYAHGGLDSNGKPADAVYGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KAMVMEKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYAHGGLDSNGKPADAVYGQ 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA4 KEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEG 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA4 SVANKFYVHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQTV :::::::::::::::::::::::::::::::::::::::::::.:::: ::::::::::: gi|109 SVANKFYVHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEERQQSPEVVADDSGTFYDQTV 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA4 SNDLEEHLEEPVVEPEPEPEPEPEPEPVSDIQEDKPEAALEEAAPDDVQKSTSPAPADVA ::::::::::::::::::::::::::::::::::::: :::::::.:::::.:::::::: gi|109 SNDLEEHLEEPVVEPEPEPEPEPEPEPVSDIQEDKPEPALEEAAPEDVQKSASPAPADVA 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA4 PAQEDLRTFSWASVTSKNLPPSGAVPVTGTPPHVVKVPASQPRPESKPDSQIPPQRPQRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PAQEDLRTFSWASVTSKNLPPSGAVPVTGTPPHVVKVPASQPRPESKPDSQIPPQRPQRD 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA4 QRVREQRINIPPQRGPRPIREAGEPGDVEPRRMVRHPDSHQLFIGNLPHEVDKSELKDFF ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QRAREQRINIPPQRGPRPIREAGEPGDVEPRRMVRHPDSHQLFIGNLPHEVDKSELKDFF 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA4 QNFGNVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNRPIMFRGAVRLNVEEKKTRAARE :..::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|109 QSYGNVVELRINSGGKLPNFGFVVFDDSEPVQKVLNNRPIMFRGAVRLNVEEKKTRAARE 430 440 450 460 470 480 460 470 480 490 500 mKIAA4 GDRRDNRLRGPGGPRGGPSGGMRGPPRGGMVQKPGFGVGRGITTPRQ ::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GDRRDNRLRGPGGPRGGPSGGMRGPPRGGMVQKPGFGVGRGITTPRQ 490 500 510 520 >>gi|14916571|sp|P97855.1|G3BP1_MOUSE RecName: Full=Ras (465 aa) initn: 3197 init1: 3197 opt: 3197 Z-score: 2760.5 bits: 520.2 E(): 4.7e-145 Smith-Waterman score: 3197; 100.000% identity (100.000% similar) in 465 aa overlap (41-505:1-465) 20 30 40 50 60 70 mKIAA4 PRHRARDAATSSHVAALSSRSAAQVEPTKAMVMEKPSPLLVGREFVRQYYTLLNQAPDML :::::::::::::::::::::::::::::: gi|149 MVMEKPSPLLVGREFVRQYYTLLNQAPDML 10 20 30 80 90 100 110 120 130 mKIAA4 HRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 EEVEEPEERQQTPEVVPDDSGTFYDQTVSNDLEEHLEEPVVEPEPEPEPEPEPEPVSDIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EEVEEPEERQQTPEVVPDDSGTFYDQTVSNDLEEHLEEPVVEPEPEPEPEPEPEPVSDIQ 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA4 EDKPEAALEEAAPDDVQKSTSPAPADVAPAQEDLRTFSWASVTSKNLPPSGAVPVTGTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EDKPEAALEEAAPDDVQKSTSPAPADVAPAQEDLRTFSWASVTSKNLPPSGAVPVTGTPP 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA4 HVVKVPASQPRPESKPDSQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEPGDVEPRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HVVKVPASQPRPESKPDSQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEPGDVEPRR 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA4 MVRHPDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVFDDSEPVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MVRHPDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVFDDSEPVQ 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA4 KVLSNRPIMFRGAVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGPSGGMRGPPRGGMVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KVLSNRPIMFRGAVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGPSGGMRGPPRGGMVQ 400 410 420 430 440 450 500 mKIAA4 KPGFGVGRGITTPRQ ::::::::::::::: gi|149 KPGFGVGRGITTPRQ 460 >>gi|119582065|gb|EAW61661.1| Ras-GTPase-activating prot (473 aa) initn: 2765 init1: 1483 opt: 3021 Z-score: 2609.0 bits: 492.2 E(): 1.3e-136 Smith-Waterman score: 3021; 93.235% identity (97.674% similar) in 473 aa overlap (35-505:2-473) 10 20 30 40 50 60 mKIAA4 GRRARVPRHRARDAATSSHVAALSSRSAAQVEPTKAMVMEKPSPLLVGREFVRQYYTLLN :: ::::::::::::::::::::::::::: gi|119 MVELTKAMVMEKPSPLLVGREFVRQYYTLLN 10 20 30 70 80 90 100 110 120 mKIAA4 QAPDMLHRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHA ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|119 QAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHA 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 TLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 PQEESEEEVEEPEERQQTPEVVPDDSGTFYDQTV-SNDLEEHLEEPVVEPEPEPEPEPEP ::::::::::::::::::::::::::::::::.: :::.::::::::.::::.:::::: gi|119 PQEESEEEVEEPEERQQTPEVVPDDSGTFYDQAVVSNDMEEHLEEPVAEPEPDPEPEPEQ 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 EPVSDIQEDKPEAALEEAAPDDVQKSTSPAPADVAPA-QEDLRTFSWASVTSKNLPPSGA ::::.:::.::: .:::.::.:.:::.::::::.: . :::::::::::::::::::::: gi|119 EPVSEIQEEKPEPVLEETAPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPSGA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 VPVTGTPPHVVKVPASQPRPESKPDSQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGE ::::: ::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|119 VPVTGIPPHVVKVPASQPRPESKPESQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGE 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 PGDVEPRRMVRHPDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVV ::.:::::::::::::::::::::::::::::::::..::::::::::::::::::::: gi|119 QGDIEPRRMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVV 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA4 FDDSEPVQKVLSNRPIMFRGAVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGPSGGMRG :::::::::::::::::::: :::::::::::::::::::::::::::::::: .::::: gi|119 FDDSEPVQKVLSNRPIMFRGEVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGLGGGMRG 400 410 420 430 440 450 490 500 mKIAA4 PPRGGMVQKPGFGVGRGITTPRQ :::::::::::::::::.. ::: gi|119 PPRGGMVQKPGFGVGRGLA-PRQ 460 470 >>gi|119582066|gb|EAW61662.1| Ras-GTPase-activating prot (505 aa) initn: 2765 init1: 1483 opt: 3021 Z-score: 2608.7 bits: 492.2 E(): 1.3e-136 Smith-Waterman score: 3021; 93.235% identity (97.674% similar) in 473 aa overlap (35-505:34-505) 10 20 30 40 50 60 mKIAA4 GRRARVPRHRARDAATSSHVAALSSRSAAQVEPTKAMVMEKPSPLLVGREFVRQYYTLLN :: ::::::::::::::::::::::::::: gi|119 QPTSHCSFMRASELEPLGQAVPKFLTLRNCVELTKAMVMEKPSPLLVGREFVRQYYTLLN 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA4 QAPDMLHRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHA ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|119 QAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHA 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA4 TLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTE 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA4 PQEESEEEVEEPEERQQTPEVVPDDSGTFYDQTV-SNDLEEHLEEPVVEPEPEPEPEPEP ::::::::::::::::::::::::::::::::.: :::.::::::::.::::.:::::: gi|119 PQEESEEEVEEPEERQQTPEVVPDDSGTFYDQAVVSNDMEEHLEEPVAEPEPDPEPEPEQ 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA4 EPVSDIQEDKPEAALEEAAPDDVQKSTSPAPADVAPA-QEDLRTFSWASVTSKNLPPSGA ::::.:::.::: .:::.::.:.:::.::::::.: . :::::::::::::::::::::: gi|119 EPVSEIQEEKPEPVLEETAPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPSGA 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA4 VPVTGTPPHVVKVPASQPRPESKPDSQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGE ::::: ::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|119 VPVTGIPPHVVKVPASQPRPESKPESQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGE 310 320 330 340 350 360 370 380 390 400 410 420 mKIAA4 PGDVEPRRMVRHPDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVV ::.:::::::::::::::::::::::::::::::::..::::::::::::::::::::: gi|119 QGDIEPRRMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVV 370 380 390 400 410 420 430 440 450 460 470 480 mKIAA4 FDDSEPVQKVLSNRPIMFRGAVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGPSGGMRG :::::::::::::::::::: :::::::::::::::::::::::::::::::: .::::: gi|119 FDDSEPVQKVLSNRPIMFRGEVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGLGGGMRG 430 440 450 460 470 480 490 500 mKIAA4 PPRGGMVQKPGFGVGRGITTPRQ :::::::::::::::::.. ::: gi|119 PPRGGMVQKPGFGVGRGLA-PRQ 490 500 >>gi|109079427|ref|XP_001110695.1| PREDICTED: Ras-GTPase (466 aa) initn: 2748 init1: 1489 opt: 3004 Z-score: 2594.5 bits: 489.5 E(): 8.3e-136 Smith-Waterman score: 3004; 93.576% identity (97.859% similar) in 467 aa overlap (41-505:1-466) 20 30 40 50 60 70 mKIAA4 PRHRARDAATSSHVAALSSRSAAQVEPTKAMVMEKPSPLLVGREFVRQYYTLLNQAPDML :::::::::::::::::::::::::::::: gi|109 MVMEKPSPLLVGREFVRQYYTLLNQAPDML 10 20 30 80 90 100 110 120 130 mKIAA4 HRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE 100 110 120 130 140 150 200 210 220 230 240 mKIAA4 EEVEEPEERQQTPEVVPDDSGTFYDQTV-SNDLEEHLEEPVVEPEPEPEPEPEPEPVSDI ::::::::::::::::::::::::::.: :::.::::::::.::::.:::::: ::::.: gi|109 EEVEEPEERQQTPEVVPDDSGTFYDQAVVSNDMEEHLEEPVAEPEPDPEPEPEQEPVSEI 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 QEDKPEAALEEAAPDDVQKSTSPAPADVAPA-QEDLRTFSWASVTSKNLPPSGAVPVTGT ::.::: .:::.::.:.:::.::::::.: . ::::::::::::::::::::::::::: gi|109 QEEKPEPVLEETAPEDTQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPSGAVPVTGI 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 PPHVVKVPASQPRPESKPDSQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEPGDVEP ::::::::::::::::::.::::::::::::::::::::::::::::::::::: ::.:: gi|109 PPHVVKVPASQPRPESKPESQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEQGDIEP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 RRMVRHPDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVFDDSEP ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|109 RRMVRHPDSHQLFIGNLPHEVDKSELKDFFQNYGNVVELRINSGGKLPNFGFVVFDDSEP 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA4 VQKVLSNRPIMFRGAVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGPSGGMRGPPRGGM :::::::::::::: :::::::::::::::::::::::::::::::: .::::::::::: gi|109 VQKVLSNRPIMFRGEVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGLGGGMRGPPRGGM 400 410 420 430 440 450 490 500 mKIAA4 VQKPGFGVGRGITTPRQ :::::::::::.. ::: gi|109 VQKPGFGVGRGLA-PRQ 460 >>gi|14916572|sp|Q13283.1|G3BP1_HUMAN RecName: Full=Ras (466 aa) initn: 2742 init1: 1483 opt: 2998 Z-score: 2589.3 bits: 488.5 E(): 1.6e-135 Smith-Waterman score: 2998; 93.362% identity (97.859% similar) in 467 aa overlap (41-505:1-466) 20 30 40 50 60 70 mKIAA4 PRHRARDAATSSHVAALSSRSAAQVEPTKAMVMEKPSPLLVGREFVRQYYTLLNQAPDML :::::::::::::::::::::::::::::: gi|149 MVMEKPSPLLVGREFVRQYYTLLNQAPDML 10 20 30 80 90 100 110 120 130 mKIAA4 HRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE 100 110 120 130 140 150 200 210 220 230 240 mKIAA4 EEVEEPEERQQTPEVVPDDSGTFYDQTV-SNDLEEHLEEPVVEPEPEPEPEPEPEPVSDI ::::::::::::::::::::::::::.: :::.::::::::.::::.:::::: ::::.: gi|149 EEVEEPEERQQTPEVVPDDSGTFYDQAVVSNDMEEHLEEPVAEPEPDPEPEPEQEPVSEI 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 QEDKPEAALEEAAPDDVQKSTSPAPADVAPA-QEDLRTFSWASVTSKNLPPSGAVPVTGT ::.::: .:::.::.:.:::.::::::.: . ::::::::::::::::::::::::::: gi|149 QEEKPEPVLEETAPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPSGAVPVTGI 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 PPHVVKVPASQPRPESKPDSQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEPGDVEP ::::::::::::::::::.::::::::::::::::::::::::::::::::::: ::.:: gi|149 PPHVVKVPASQPRPESKPESQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEQGDIEP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 RRMVRHPDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVFDDSEP :::::::::::::::::::::::::::::::..::::::::::::::::::::::::::: gi|149 RRMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDDSEP 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA4 VQKVLSNRPIMFRGAVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGPSGGMRGPPRGGM :::::::::::::: :::::::::::::::::::::::::::::::: .::::::::::: gi|149 VQKVLSNRPIMFRGEVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGLGGGMRGPPRGGM 400 410 420 430 440 450 490 500 mKIAA4 VQKPGFGVGRGITTPRQ :::::::::::.. ::: gi|149 VQKPGFGVGRGLA-PRQ 460 >>gi|54695634|gb|AAV38189.1| Ras-GTPase-activating prote (467 aa) initn: 2742 init1: 1483 opt: 2998 Z-score: 2589.3 bits: 488.5 E(): 1.6e-135 Smith-Waterman score: 2998; 93.362% identity (97.859% similar) in 467 aa overlap (41-505:1-466) 20 30 40 50 60 70 mKIAA4 PRHRARDAATSSHVAALSSRSAAQVEPTKAMVMEKPSPLLVGREFVRQYYTLLNQAPDML :::::::::::::::::::::::::::::: gi|546 MVMEKPSPLLVGREFVRQYYTLLNQAPDML 10 20 30 80 90 100 110 120 130 mKIAA4 HRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 HRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE 100 110 120 130 140 150 200 210 220 230 240 mKIAA4 EEVEEPEERQQTPEVVPDDSGTFYDQTV-SNDLEEHLEEPVVEPEPEPEPEPEPEPVSDI ::::::::::::::::::::::::::.: :::.::::::::.::::.:::::: ::::.: gi|546 EEVEEPEERQQTPEVVPDDSGTFYDQAVVSNDMEEHLEEPVAEPEPDPEPEPEQEPVSEI 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 QEDKPEAALEEAAPDDVQKSTSPAPADVAPA-QEDLRTFSWASVTSKNLPPSGAVPVTGT ::.::: .:::.::.:.:::.::::::.: . ::::::::::::::::::::::::::: gi|546 QEEKPEPVLEETAPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPSGAVPVTGI 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 PPHVVKVPASQPRPESKPDSQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEPGDVEP ::::::::::::::::::.::::::::::::::::::::::::::::::::::: ::.:: gi|546 PPHVVKVPASQPRPESKPESQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEQGDIEP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 RRMVRHPDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVFDDSEP :::::::::::::::::::::::::::::::..::::::::::::::::::::::::::: gi|546 RRMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDDSEP 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA4 VQKVLSNRPIMFRGAVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGPSGGMRGPPRGGM :::::::::::::: :::::::::::::::::::::::::::::::: .::::::::::: gi|546 VQKVLSNRPIMFRGEVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGLGGGMRGPPRGGM 400 410 420 430 440 450 490 500 mKIAA4 VQKPGFGVGRGITTPRQ :::::::::::.. ::: gi|546 VQKPGFGVGRGLA-PRQL 460 >>gi|114602975|ref|XP_001168984.1| PREDICTED: Ras-GTPase (466 aa) initn: 2740 init1: 1483 opt: 2996 Z-score: 2587.6 bits: 488.2 E(): 2e-135 Smith-Waterman score: 2996; 93.362% identity (97.859% similar) in 467 aa overlap (41-505:1-466) 20 30 40 50 60 70 mKIAA4 PRHRARDAATSSHVAALSSRSAAQVEPTKAMVMEKPSPLLVGREFVRQYYTLLNQAPDML :::::::::::::::::::::::::::::: gi|114 MVMEKPSPLLVGREFVRQYYTLLNQAPDML 10 20 30 80 90 100 110 120 130 mKIAA4 HRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE 100 110 120 130 140 150 200 210 220 230 240 mKIAA4 EEVEEPEERQQTPEVVPDDSGTFYDQTV-SNDLEEHLEEPVVEPEPEPEPEPEPEPVSDI ::::::::::::::::::::::::::.: :::.::::::::.::::.:::::: ::::.: gi|114 EEVEEPEERQQTPEVVPDDSGTFYDQAVVSNDVEEHLEEPVAEPEPDPEPEPEQEPVSEI 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 QEDKPEAALEEAAPDDVQKSTSPAPADVAPA-QEDLRTFSWASVTSKNLPPSGAVPVTGT ::.::: .:::.::.:.:::.::::::.: . ::::::::::::::::::::::::::: gi|114 QEEKPEPVLEETAPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPSGAVPVTGI 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 PPHVVKVPASQPRPESKPDSQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEPGDVEP ::::::::::::::::::.::::::::::::::::::::::::::::::::::: ::.:: gi|114 PPHVVKVPASQPRPESKPESQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEQGDIEP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 RRMVRHPDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVFDDSEP :::::::::::::::::::::::::::::::..::::::::::::::::::::::::::: gi|114 RRMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDDSEP 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA4 VQKVLSNRPIMFRGAVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGPSGGMRGPPRGGM :::::::::::::: :::::::::::::::::::::::::::::::: .::::::::::: gi|114 VQKVLSNRPIMFRGEVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGLGGGMRGPPRGGM 400 410 420 430 440 450 490 500 mKIAA4 VQKPGFGVGRGITTPRQ :::::::::::.. ::: gi|114 VQKPGFGVGRGLA-PRQ 460 >>gi|122063478|sp|Q32LC7.1|G3BP1_BOVIN RecName: Full=Ras (465 aa) initn: 3026 init1: 1531 opt: 2994 Z-score: 2585.9 bits: 487.9 E(): 2.5e-135 Smith-Waterman score: 2994; 93.348% identity (97.639% similar) in 466 aa overlap (41-505:1-465) 20 30 40 50 60 70 mKIAA4 PRHRARDAATSSHVAALSSRSAAQVEPTKAMVMEKPSPLLVGREFVRQYYTLLNQAPDML :::::::::::::::::::::::::::::: gi|122 MVMEKPSPLLVGREFVRQYYTLLNQAPDML 10 20 30 80 90 100 110 120 130 mKIAA4 HRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 HRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|122 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFITEPQEESE 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 EEVEEPEERQQTPEVVPDDSGTFYDQTVSNDLEEHLEEPVVEPEPEPEPEPEPEPVSDIQ ::::::::::::::::::::::::::::::::::::::::.::::::::::: ::::..: gi|122 EEVEEPEERQQTPEVVPDDSGTFYDQTVSNDLEEHLEEPVAEPEPEPEPEPEQEPVSEVQ 160 170 180 190 200 210 260 270 280 290 300 mKIAA4 EDKPEAALEEAAPDDVQKSTSPAPADVAPA-QEDLRTFSWASVTSKNLPPSGAVPVTGTP :.: : .:::.::.:::::.::::::.: . ::::::::::::::::::::::::::: : gi|122 EEKSEPVLEETAPEDVQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPSGAVPVTGIP 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 PHVVKVPASQPRPESKPDSQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEPGDVEPR :::::::::::::::::.:::: :::::::::::::::.::::::::.::::: :::::: gi|122 PHVVKVPASQPRPESKPESQIPLQRPQRDQRVREQRINVPPQRGPRPVREAGEQGDVEPR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 RMVRHPDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVFDDSEPV :.:::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|122 RIVRHPDSHQLFIGNLPHEVDKSELKDFFQNYGNVVELRINSGGKLPNFGFVVFDDSEPV 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA4 QKVLSNRPIMFRGAVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGPSGGMRGPPRGGMV ::::::::::::: :::::::::::::::::::::::::::::::: .:::::::::::: gi|122 QKVLSNRPIMFRGEVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGLGGGMRGPPRGGMV 400 410 420 430 440 450 490 500 mKIAA4 QKPGFGVGRGITTPRQ :::::::::.:. ::: gi|122 QKPGFGVGRSIA-PRQ 460 >>gi|75070772|sp|Q5RB87.1|G3BP1_PONAB RecName: Full=Ras (466 aa) initn: 2742 init1: 1483 opt: 2993 Z-score: 2585.0 bits: 487.7 E(): 2.8e-135 Smith-Waterman score: 2993; 93.148% identity (97.859% similar) in 467 aa overlap (41-505:1-466) 20 30 40 50 60 70 mKIAA4 PRHRARDAATSSHVAALSSRSAAQVEPTKAMVMEKPSPLLVGREFVRQYYTLLNQAPDML :::::::::::::::::::::::::::::: gi|750 MVMEKPSPLLVGREFVRQYYTLLNQAPDML 10 20 30 80 90 100 110 120 130 mKIAA4 HRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 HRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGV 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 VVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESE 100 110 120 130 140 150 200 210 220 230 240 mKIAA4 EEVEEPEERQQTPEVVPDDSGTFYDQTV-SNDLEEHLEEPVVEPEPEPEPEPEPEPVSDI ::::::::::::::::::::::::::.: :::.::::::::.::::.:::::: ::::.: gi|750 EEVEEPEERQQTPEVVPDDSGTFYDQAVVSNDMEEHLEEPVAEPEPDPEPEPEQEPVSEI 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 QEDKPEAALEEAAPDDVQKSTSPAPADVAPA-QEDLRTFSWASVTSKNLPPSGAVPVTGT ::.::: .:::..:.:.:::.::::::.: . ::::::::::::::::::::::::::: gi|750 QEEKPEPVLEETVPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPSGAVPVTGI 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 PPHVVKVPASQPRPESKPDSQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEPGDVEP ::::::::::::::::::.::::::::::::::::::::::::::::::::::: ::.:: gi|750 PPHVVKVPASQPRPESKPESQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEQGDIEP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 RRMVRHPDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVFDDSEP :::::::::::::::::::::::::::::::..::::::::::::::::::::::::::: gi|750 RRMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDDSEP 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA4 VQKVLSNRPIMFRGAVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGPSGGMRGPPRGGM :::::::::::::: :::::::::::::::::::::::::::::::: .::::::::::: gi|750 VQKVLSNRPIMFRGEVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGLGGGMRGPPRGGM 400 410 420 430 440 450 490 500 mKIAA4 VQKPGFGVGRGITTPRQ :::::::::::.. ::: gi|750 VQKPGFGVGRGLA-PRQ 460 505 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 14:49:28 2009 done: Tue Mar 17 14:56:29 2009 Total Scan time: 944.160 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]