# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msj04376.fasta.nr -Q ../query/mKIAA1271.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 mKIAA1271, 450 aa
 vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library

2727779818 residues in 7921681 sequences
 statistics sampled from 60000 to 7912795 sequences
  Expectation_n fit: rho(ln(x))= 6.4249+/-0.000198; mu= 5.7209+/- 0.011
 mean_var=116.3520+/-21.910, 0's: 24 Z-trim: 53  B-trim: 0 in 0/65
 Lambda= 0.118901

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 37, opt: 25, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(7921681)
gi|81170679|sp|Q8VCF0.1|MAVS_MOUSE RecName: Full=M ( 503) 2948 516.5  6e-144
gi|148696369|gb|EDL28316.1| RIKEN cDNA D430028G21, ( 505) 2948 516.5  6e-144
gi|81170680|sp|Q66HG9.1|MAVS_RAT RecName: Full=Mit ( 507) 2267 399.7 8.8e-109
gi|74148991|dbj|BAE32168.1| unnamed protein produc ( 333) 2133 376.5 5.3e-102
gi|119507309|dbj|BAF42542.1| mitochondrial antivir ( 524)  789 146.1 1.9e-32
gi|86438388|gb|AAI12825.1| Virus-induced signaling ( 520)  784 145.3 3.4e-32
gi|169790858|ref|NP_001116081.1| virus-induced sig ( 520)  781 144.8 4.9e-32
gi|149733452|ref|XP_001496611.1| PREDICTED: simila ( 530)  770 142.9 1.8e-31
gi|114680729|ref|XP_525410.2| PREDICTED: virus-ind ( 540)  753 140.0 1.4e-30
gi|31455461|dbj|BAC77356.1| putative NFkB activati ( 540)  751 139.6 1.8e-30
gi|47115748|sp|Q7Z434.2|MAVS_HUMAN RecName: Full=M ( 540)  748 139.1 2.5e-30
gi|27924145|gb|AAH44952.1| Virus-induced signaling ( 540)  746 138.8 3.2e-30
gi|110339453|gb|ABG67965.1| virus-induced signalin ( 541)  739 137.6 7.4e-30
gi|10435844|dbj|BAB14684.1| unnamed protein produc ( 404)  716 133.5 9.2e-29
gi|119630887|gb|EAX10482.1| virus-induced signalin ( 484)  556 106.1 1.9e-20
gi|158257002|dbj|BAF84474.1| unnamed protein produ ( 399)  451 88.1 4.4e-15
gi|220972438|gb|EED90770.1| predicted protein [Tha (1524)  283 59.7 5.8e-06
gi|209585698|gb|ACI64383.1| predicted protein [Tha (3283)  272 58.1 3.8e-05
gi|119917405|ref|XP_001250260.1| PREDICTED: simila ( 103)  238 51.1 0.00016
gi|70905641|gb|AAZ14280.1| proteophosphoglycan ppg (7194)  263 56.8  0.0002
gi|134065504|emb|CAM43271.1| proteophosphoglycan p (5384)  260 56.2 0.00023
gi|134065503|emb|CAM43270.1| proteophosphoglycan p (4324)  258 55.8 0.00025
gi|145011690|gb|EDJ96346.1| hypothetical protein M ( 804)  245 53.0 0.00032
gi|163667088|gb|ABY33454.1| autotransporter-associ (1320)  246 53.3 0.00042
gi|70905643|gb|AAZ14282.1| proteophosphoglycan ppg (2425)  249 54.0 0.00047
gi|99077761|emb|CAK18547.1| cell surface flocculin (1630)  246 53.4 0.00049
gi|194157432|gb|EDW72333.1| GK20868 [Drosophila wi (1574)  244 53.0 0.00061
gi|154690530|gb|ABS83845.1| Hypothetical protein C ( 825)  239 52.0 0.00068
gi|34528235|dbj|BAC85473.1| unnamed protein produc ( 138)  227 49.3 0.00072
gi|119397654|gb|EAW08085.1| conserved hypothetical ( 577)  236 51.3 0.00073
gi|70905640|gb|AAZ14279.1| proteophosphoglycan ppg (1435)  241 52.5 0.00081
gi|223541814|gb|EEF43362.1| protein binding protei ( 829)  237 51.6 0.00086
gi|194389262|dbj|BAG65619.1| unnamed protein produ (1935)  242 52.8 0.00091
gi|109123224|ref|XP_001099067.1| PREDICTED: hypoth ( 943)  237 51.7 0.00095
gi|194183437|gb|EDW97048.1| GE24546 [Drosophila ya ( 879)  233 50.9  0.0014
gi|73955483|ref|XP_858680.1| PREDICTED: similar to (1888)  237 51.9  0.0016
gi|47213833|emb|CAG00637.1| unnamed protein produc (4522)  242 53.0  0.0017
gi|70905642|gb|AAZ14281.1| proteophosphoglycan 5 [ (17392)  250 54.9  0.0019
gi|134078510|emb|CAK40432.1| unnamed protein produ (1257)  233 51.1  0.0019
gi|133323|sp|P11414.1|RPB1_CRIGR RecName: Full=DNA ( 467)  226 49.5  0.0021
gi|73955477|ref|XP_858553.1| PREDICTED: similar to (1891)  234 51.4  0.0023
gi|73955475|ref|XP_858521.1| PREDICTED: similar to (1908)  234 51.4  0.0023
gi|73955461|ref|XP_858255.1| PREDICTED: similar to (1922)  234 51.4  0.0023
gi|73955439|ref|XP_849064.1| PREDICTED: similar to (1922)  234 51.4  0.0023
gi|73955459|ref|XP_858210.1| PREDICTED: similar to (1923)  234 51.4  0.0023
gi|73955467|ref|XP_858373.1| PREDICTED: similar to (1924)  234 51.4  0.0023
gi|194133050|gb|EDW54618.1| GM18689 [Drosophila se ( 678)  227 49.8  0.0024
gi|194375696|dbj|BAG57192.1| unnamed protein produ ( 855)  228 50.1  0.0026
gi|149363857|gb|ABR24162.1| virus-induced signalin ( 124)  215 47.2  0.0028
gi|134073236|emb|CAM71958.1| proteophosphoglycan p (5967)  238 52.5  0.0035


>>gi|81170679|sp|Q8VCF0.1|MAVS_MOUSE RecName: Full=Mitoc  (503 aa)
 initn: 2948 init1: 2948 opt: 2948  Z-score: 2740.7  bits: 516.5 E(): 6e-144
Smith-Waterman score: 2948;  100.000% identity (100.000% similar) in 450 aa overlap (1-450:54-503)

                                             10        20        30
mKIAA1                               TLWGLFNNLQRRPGWVEVFIRALQICELPG
                                     ::::::::::::::::::::::::::::::
gi|811 VLEILPYLSCLTASDQDRLRASYRQIGNRDTLWGLFNNLQRRPGWVEVFIRALQICELPG
            30        40        50        60        70        80   

               40        50        60        70        80        90
mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRETPSCPKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|811 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRETPSCPKP
            90       100       110       120       130       140   

              100       110       120       130       140       150
mKIAA1 VQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|811 VQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELGGA
           150       160       170       180       190       200   

              160       170       180       190       200       210
mKIAA1 HAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAFAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|811 HAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAFAK
           210       220       230       240       250       260   

              220       230       240       250       260       270
mKIAA1 GAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTNTAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|811 GAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTNTAP
           270       280       290       300       310       320   

              280       290       300       310       320       330
mKIAA1 SKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTGPNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|811 SKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTGPNS
           330       340       350       360       370       380   

              340       350       360       370       380       390
mKIAA1 SIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFRIQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|811 SIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFRIQV
           390       400       410       420       430       440   

              400       410       420       430       440       450
mKIAA1 DESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRRLAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|811 DESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRRLAQ
           450       460       470       480       490       500   

>>gi|148696369|gb|EDL28316.1| RIKEN cDNA D430028G21, iso  (505 aa)
 initn: 2948 init1: 2948 opt: 2948  Z-score: 2740.6  bits: 516.5 E(): 6e-144
Smith-Waterman score: 2948;  100.000% identity (100.000% similar) in 450 aa overlap (1-450:56-505)

                                             10        20        30
mKIAA1                               TLWGLFNNLQRRPGWVEVFIRALQICELPG
                                     ::::::::::::::::::::::::::::::
gi|148 VLEILPYLSCLTASDQDRLRASYRQIGNRDTLWGLFNNLQRRPGWVEVFIRALQICELPG
          30        40        50        60        70        80     

               40        50        60        70        80        90
mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRETPSCPKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRETPSCPKP
          90       100       110       120       130       140     

              100       110       120       130       140       150
mKIAA1 VQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 VQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELGGA
         150       160       170       180       190       200     

              160       170       180       190       200       210
mKIAA1 HAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAFAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 HAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAFAK
         210       220       230       240       250       260     

              220       230       240       250       260       270
mKIAA1 GAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTNTAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 GAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTNTAP
         270       280       290       300       310       320     

              280       290       300       310       320       330
mKIAA1 SKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTGPNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 SKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTGPNS
         330       340       350       360       370       380     

              340       350       360       370       380       390
mKIAA1 SIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFRIQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 SIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFRIQV
         390       400       410       420       430       440     

              400       410       420       430       440       450
mKIAA1 DESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRRLAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 DESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRRLAQ
         450       460       470       480       490       500     

>>gi|81170680|sp|Q66HG9.1|MAVS_RAT RecName: Full=Mitocho  (507 aa)
 initn: 1774 init1: 1163 opt: 2267  Z-score: 2109.3  bits: 399.7 E(): 8.8e-109
Smith-Waterman score: 2267;  79.075% identity (88.326% similar) in 454 aa overlap (1-450:54-507)

                                             10        20        30
mKIAA1                               TLWGLFNNLQRRPGWVEVFIRALQICELPG
                                     ::: :::.:::::::::::::::.::::::
gi|811 VLEILPYLSCLTTSDQDRLRASYKQLGNQGTLWELFNTLQRRPGWVEVFIRALRICELPG
            30        40        50        60        70        80   

               40        50        60        70        80        90
mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRETPSCPKP
       ::.:::::::::::::.::.::.::: : .:..:: ::::: ::.::: :... :. :::
gi|811 LAEQVTRVYQSYLPPGASLHSLDPLQSPRIPTTVSEPSAFAAGHTIPDSGFQDKPGYPKP
            90       100       110       120       130       140   

              100       110       120       130       140       150
mKIAA1 VQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELGGA
       :::::::.:::::::.  :.: ::. :::: ::: :::  :::::::::: :::::::: 
gi|811 VQDTQPPKSPVENSEEPPQANFGAIPRMSGDSLISSPNPPALSPQPSREHPEQEPELGGP
           150       160       170       180       190       200   

              160       170       180       190       200       210
mKIAA1 HAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAFAK
        .::: ::::::::::::::::::::: : ::::  ::::::::: :.::::::::::::
gi|811 STANVDSVPIATYGPVSPTVSFQPLPRIAPRTNLSPGVTVSALSAKTTLSSSSTGSAFAK
           210       220       230       240       250       260   

              220          230       240       250       260       
mKIAA1 GAGDQAKAATCFSTTL---TNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTN
       ::::::::::: ::     ::::::::::: . :::.:::::::.:.:::::  ::: ::
gi|811 GAGDQAKAATCVSTKEGVPTNSVTTSSVPSIKPVPVNTMSSKLPISTKSTAATPSTVPTN
           270       280       290       300       310       320   

       270       280       290       300       310       320       
mKIAA1 TAPSKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTG
        :::::: ::::.: :::.: :::::: :.:.:::::.:::::: :.::: ::::.. : 
gi|811 IAPSKLPINSVYTGIVPSKVTASVAKASASTMPPERNNKQAKETLEAPATVVTTGSSLTR
           330       340       350       360       370       380   

       330       340       350        360       370       380      
mKIAA1 PNSSIRSLHSGPEMSKPGVLVSQLD-EPFSACSVDLAISPSSSLVSEPNHGPEENEYSSF
       :. : ::::::::.:::::::::.: :::::::.:::::::.:: :::::::::::::::
gi|811 PDISSRSLHSGPELSKPGVLVSQVDNEPFSACSMDLAISPSTSLGSEPNHGPEENEYSSF
           390       400       410       420       430       440   

        390       400       410       420       430       440      
mKIAA1 RIQVDESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSR
       :::::.:::.:::::::::::::  :::: ::::. :::::::::::::.::::::::::
gi|811 RIQVDKSPSVDLLGSPEPLATQQSPEEEEPCASSVSWAKWLGATSALLAAFLAVMLYRSR
           450       460       470       480       490       500   

        450
mKIAA1 RLAQ
       .:::
gi|811 HLAQ
           

>>gi|74148991|dbj|BAE32168.1| unnamed protein product [M  (333 aa)
 initn: 2133 init1: 2133 opt: 2133  Z-score: 1987.5  bits: 376.5 E(): 5.3e-102
Smith-Waterman score: 2133;  100.000% identity (100.000% similar) in 333 aa overlap (118-450:1-333)

        90       100       110       120       130       140       
mKIAA1 PKPVQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPEL
                                     ::::::::::::::::::::::::::::::
gi|741                               MSGGSLIPSPNQQALSPQPSREHQEQEPEL
                                             10        20        30

       150       160       170       180       190       200       
mKIAA1 GGAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 GGAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSA
               40        50        60        70        80        90

       210       220       230       240       250       260       
mKIAA1 FAKGAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 FAKGAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTN
              100       110       120       130       140       150

       270       280       290       300       310       320       
mKIAA1 TAPSKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 TAPSKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTG
              160       170       180       190       200       210

       330       340       350       360       370       380       
mKIAA1 PNSSIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 PNSSIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFR
              220       230       240       250       260       270

       390       400       410       420       430       440       
mKIAA1 IQVDESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 IQVDESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRR
              280       290       300       310       320       330

       450
mKIAA1 LAQ
       :::
gi|741 LAQ
          

>>gi|119507309|dbj|BAF42542.1| mitochondrial antiviral s  (524 aa)
 initn: 968 init1: 452 opt: 789  Z-score: 738.9  bits: 146.1 E(): 1.9e-32
Smith-Waterman score: 1084;  47.107% identity (66.529% similar) in 484 aa overlap (1-450:54-524)

                                             10        20        30
mKIAA1                               TLWGLFNNLQRRPGWVEVFIRALQICELPG
                                     ::: ::..:.:: :::. :: ::.::::  
gi|119 VLEILPYLSCLTASDQDRLRASFERWGNQGTLWDLFDSLRRRSGWVQSFIGALRICELSD
            30        40        50        60        70        80   

               40        50        60        70        80          
mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRET-PSCPK
       :::.:.::::. :  ...     ::. :. :: . :::  : . .:: .: ::  :: : 
gi|119 LADEVSRVYQNSLLRNSN-SPPAPLEPPSTPAEAPGPSRPAVAPSIPHNGYREDEPSYPM
            90       100        110       120       130       140  

      90       100       110        120       130       140        
mKIAA1 PVQDTQPPESPVENSEQLLQT-NSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELG
       :::::: ::.: :.:.   :  ::::: .  :: : :: .  ::::  :  ::.:. :::
gi|119 PVQDTQSPEAPGESSKTAPQPPNSGAVLKRPGGPLEPSSDV-ALSPLTSGGHQKQDTELG
            150       160       170       180        190       200 

      150       160       170       180       190       200        
mKIAA1 GAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAF
       .::.:...: : .  :::::::::::: :.. :.. : :  ::.       .::::: : 
gi|119 SAHTAGTVSSPTSPRGPVSPTVSFQPLARSTPRASRLPGPPVST-------ASSSTGLAS
             210       220       230       240              250    

      210       220         230       240            250       260 
mKIAA1 AKGAGDQAKAATCF--STTLTNSVTTSSVPSPRLVPVK-----TMSSKLPLSSKSTAAMT
       : :::::..:. :   . . :.:::.: :::   ::..     :: :::: : :  .::.
gi|119 AGGAGDQVEATICSGGAGVPTTSVTASMVPSK--VPTNSAFASTMPSKLPTSLKPPGAMS
          260       270       280         290       300       310  

             270       280                  290        300         
mKIAA1 STVLTNTAPSKLPSNSVYAGTVPSRVP-----------ASVA-KAPANTIPPERNS-KQA
       ..:  ..:::::: ::.  :..  .::           ..:: :.:::: :  :.: .  
gi|119 TNVSPSVAPSKLPINSTRPGAMSPKVPTGLLPDHRKPTSTVASKVPANTGPTIRSSNRPE
            320       330       340       350       360       370  

      310       320        330        340       350        360     
mKIAA1 KETPEGPATKVTT-GGNQTGPNS-SIRSLHSGPEMSKPGVLVSQLD-EPFSACSVDLAIS
       :::: .::   :. ::..  :.: : :     ::.:::: :::..: .:::. : :::::
gi|119 KETPASPAPIGTAAGGTSPWPDSNSDRWDSEEPELSKPGRLVSRMDSQPFSGSSEDLAIS
            380       390       400       410       420       430  

         370       380        390       400        410             
mKIAA1 PSSSLVSEPNHGPEENEYSSF-RIQVDESPSADLLG-SPEPLATQQPQEEEE-----HCA
        :. : : :.. :::::: :   :... .::.  .: :: ::.... : :::     . .
gi|119 YSNPLGSGPDNTPEENEYVSVDTIRIQGDPSTPPVGDSPGPLTASEFQAEEELEEGLEEV
            440       450       460       470       480       490  

      420       430         440       450
mKIAA1 SSMPWAKWLGAT--SALLAVFLAVMLYRSRRLAQ
       ..   : :.:..  ..:::..:: :::: ::: :
gi|119 KTEARAPWVGVAVVGVLLATLLA-MLYR-RRLPQ
            500       510         520    

>>gi|86438388|gb|AAI12825.1| Virus-induced signaling ada  (520 aa)
 initn: 949 init1: 288 opt: 784  Z-score: 734.3  bits: 145.3 E(): 3.4e-32
Smith-Waterman score: 1123;  47.170% identity (67.505% similar) in 477 aa overlap (1-450:54-520)

                                             10        20        30
mKIAA1                               TLWGLFNNLQRRPGWVEVFIRALQICELPG
                                     :::.::. :.:: :::. :::::. ::   
gi|864 VLDILPHLSCLTINDQDRLRAHFDRWGNQGTLWNLFDILRRRNGWVDSFIRALRACEHTV
            30        40        50        60        70        80   

               40        50        60        70        80          
mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRE-TPSCPK
       :::.:..:::: :: . . .   ::. :..:: .  ::. : . .:::.:  :  :: : 
gi|864 LADEVAHVYQSNLPRSPN-HPPAPLEPPSIPAEIPRPSTPAVAPSIPDNGHTEYEPSYPV
            90       100        110       120       130       140  

      90       100        110       120       130       140        
mKIAA1 PVQDTQPPESPVENSEQLLQ-TNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELG
       ::::::::::  ::::.  : ..:::: .  :: : :  .  :::   :  ::::. :::
gi|864 PVQDTQPPESLGENSEKAPQPSHSGAVLKRLGGPLEPLSDTVALSTLTSSVHQEQDTELG
            150       160       170       180       190       200  

      150       160       170       180       190       200        
mKIAA1 GAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAF
       ..:.:.:.:   .  :::::::::::: :.. :.. : :  ::: :. :  :::::: . 
gi|864 NTHTAGVVSSSTSLRGPVSPTVSFQPLARSTPRASRLPGPPVSAPSVGT--SSSSTGLTS
            210       220       230       240       250         260

      210       220         230       240            250       260 
mKIAA1 AKGAGDQAKAATCFSTTLT--NSVTTSSVPSPRLVPVKT-----MSSKLPLSSKSTAAMT
       : :::::.... : : . .  : ...:.:::   ::...     . :::: : :  .:  
gi|864 AGGAGDQTEGTICSSGAGVPNNPMAASTVPSK--VPTNSAFGSSVPSKLPTSLKPPGA--
              270       280       290         300       310        

             270       280       290          300                  
mKIAA1 STVLTNTAPSKLPSNSVYAGTVPSRVPASVA---KAPANTIPPE---------RNSKQ-A
         : :: :::.:: ::: .: :: .::.:     . ::.:.: .         :.:.. .
gi|864 --VPTNLAPSRLPINSVRSGMVPPKVPTSGIPDHRIPASTVPSKVPANTRLTIRSSNRLV
          320       330       340       350       360       370    

      310        320       330       340       350        360      
mKIAA1 KETPEGPA-TKVTTGGNQTGPNSSIRSLHSGPEMSKPGVLVSQLD-EPFSACSVDLAISP
       :::: .:. : ..:::..  :.::     :  :.:::: :::..: .:::.::.::::: 
gi|864 KETPASPVPTGTATGGTSLWPDSSSDCCGSELELSKPGRLVSRMDSQPFSVCSADLAISH
          380       390       400       410       420       430    

        370       380        390       400        410        420   
mKIAA1 SSSLVSEPNHGPEENEYSSF-RIQVDESPSADLLG-SPEPLATQQPQEEEE-HCASSMPW
       :.::   :...:::::: :   :.. :.::..::: ::   .: . .: .:   . .:::
gi|864 SNSLGMGPDNAPEENEYVSEDTIRIHENPSTSLLGDSPGTYTTPEEDELKELPVVRTMPW
          440       450       460       470       480       490    

           430       440       450
mKIAA1 AKWLGATSALLAVFLAVMLYRSRRLAQ
       :.:::.. :   . : . ::: ::: :
gi|864 ASWLGVAMAGALLVLLASLYR-RRLPQ
          500       510        520

>>gi|169790858|ref|NP_001116081.1| virus-induced signali  (520 aa)
 initn: 989 init1: 585 opt: 781  Z-score: 731.5  bits: 144.8 E(): 4.9e-32
Smith-Waterman score: 1116;  47.589% identity (67.296% similar) in 477 aa overlap (1-450:54-520)

                                             10        20        30
mKIAA1                               TLWGLFNNLQRRPGWVEVFIRALQICELPG
                                     ::: :::.:.:: :::: ::.::..::: .
gi|169 VLEILPYLSCLTTSDQDRLRASYQLWGNQGTLWELFNSLRRRTGWVESFIKALRVCELAS
            30        40        50        60        70        80   

               40        50        60        70        80          
mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRET-PSCPK
       :::.:.::::: :  :.: .   : .    :: : :: : : . . : .: ::  :: : 
gi|169 LADEVARVYQSNLS-GVSNHPPAPAEPQLVPAEVPGPPAPAVAPSTPTNGYREEEPSFPL
            90        100       110       120       130       140  

      90       100       110        120       130       140        
mKIAA1 PVQDTQPPESPVENSEQLLQT-NSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELG
       :::::: :::  :.:... :  .:::: : .:    :: .. :..:  .  ::::.  ::
gi|169 PVQDTQLPESLEESSKKVPQMPHSGAVRRPAGPRE-PSSDMAAVNPLTASGHQEQDTGLG
            150       160       170        180       190       200 

      150       160       170       180       190       200        
mKIAA1 GAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAF
       ::: :..::   .. :::::::::.:: :.  :.. : .   :::. .:. .::: ::: 
gi|169 GAHIAGTASGLTSARGPVSPTVSFKPLSRSIPRASRLPA--PSALALSTGTTSSSPGSAS
             210       220       230       240         250         

      210       220         230         240        250       260   
mKIAA1 AKGAGDQAKAATC--FSTTLTNSVTTSSVPS--PRLVPVKTMS-SKLPLSSKSTAAMTST
       :  :::...:. :  .. . :...:::..::  :       :. :::: ::: ...: .:
gi|169 AGVAGDHGEATICSTMAGVSTGALTTSTAPSKVPTHSTFDRMAPSKLPASSKPSGTMPTT
     260       270       280       290       300       310         

           270       280       290                   300       310 
mKIAA1 VLTNTAPSKLPSNSVYAGTVPSRVPASV------------AKAPANTIPPERNSKQAKET
        :    ::::: ::. ::::: ::::..            .:.::::.:   ..  . ::
gi|169 SLP---PSKLPINSTRAGTVPPRVPAGLVPDHKMSASTVPSKGPANTVPSISSNVPSGET
     320          330       340       350       360       370      

              320       330       340       350        360         
mKIAA1 PEGPA-TKVTTGGNQTGPNSSIRSLHSGPEMSKPGVLVSQLD-EPFSACSVDLAISPSSS
         .:. : ..:  .  : . :  .  :  :.:::: :.::.: ::::.::.:::.: : :
gi|169 ATAPVPTDISTRDSLPGLDRSSAGWGSELELSKPGRLASQVDSEPFSGCSADLALSYSRS
        380       390       400       410       420       430      

     370       380          390        400       410       420     
mKIAA1 LVSEPNHGPEENEYSS---FRIQVDESPSADLL-GSPEPLATQQPQEEEEHCASSMPWAK
       : . :...::::::.:   .:::: ..::::::  .: : :: ::  :::   .:  :: 
gi|169 LGAGPDNAPEENEYQSVDSIRIQVVQDPSADLLEHNPGPRATPQPTVEEEPVQAS-SWAP
        440       450       460       470       480       490      

           430       440       450
mKIAA1 WLGA--TSALLAVFLAVMLYRSRRLAQ
       :::.  :...::..::: ::: ::: :
gi|169 WLGVATTGVFLAMLLAV-LYR-RRLLQ
         500       510         520

>>gi|149733452|ref|XP_001496611.1| PREDICTED: similar to  (530 aa)
 initn: 814 init1: 301 opt: 770  Z-score: 721.2  bits: 142.9 E(): 1.8e-31
Smith-Waterman score: 1147;  47.727% identity (68.182% similar) in 484 aa overlap (1-450:54-530)

                                             10        20        30
mKIAA1                               TLWGLFNNLQRRPGWVEVFIRALQICELPG
                                     ::  ::..:.:: :::. .: ::. ::: :
gi|149 VLEILPYLSCLTTSDQDRLRATYERWGNQDTLLELFTSLRRRNGWVHSLIGALRACELSG
            30        40        50        60        70        80   

               40        50        60        70        80          
mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLR-ETPSCPK
       :::.:.:.:.: ::  :: :   ::.  . :: :  ::  : . . : .: : : :: : 
gi|149 LADEVARIYHSSLPR-TSNRPPAPLEPSSVPAEVPEPSIPAEAPSAPHNGYRGEEPSYPM
            90        100       110       120       130       140  

      90       100       110        120       130       140        
mKIAA1 PVQDTQPPESPVENSEQLLQTNS-GAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELG
       :::::.:::   :.:..  .: : ::: :   : : :: .  : ::  :   :::. :::
gi|149 PVQDTRPPEPEGESSRKAPETPSPGAVLRRPDGPLEPSSDLAATSPLTSSGPQEQDTELG
            150       160       170       180       190       200  

      150       160       170       180       190       200        
mKIAA1 GAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAF
       ..:.:...:   .  :::::::::::: :.. :.. : :  :::::.::  :::::  : 
gi|149 STHSAGMVSGLTSPRGPVSPTVSFQPLARSTPRASRLPGPPVSALSTDT--SSSSTILAS
            210       220       230       240       250         260

      210       220         230       240            250       260 
mKIAA1 AKGAGDQAKAATCFSTTL--TNSVTTSSVPSPRLVPVK-----TMSSKLPLSSKSTAAMT
       . .:::.:.:. : : .   :.:.:::.:::   ::.:     :. :::: :::  ..  
gi|149 SGSAGDHAEATICSSGVEVPTTSMTTSTVPSK--VPTKPAFPSTVPSKLPTSSKPPGTTP
              270       280       290         300       310        

             270       280       290                   300         
mKIAA1 STVLTNTAPSKLPSNSVYAGTVPSRVPASVA------------KAPANTIPPERNSKQAK
       . : .: :::::: ::. ::::: .: .:.:            :.::::.   :.:.. .
gi|149 TKVPANQAPSKLPINSTRAGTVPPKVATSLAPDHRIPMSMMPSKVPANTVRTIRSSQRPE
      320       330       340       350       360       370        

     310          320       330       340       350        360     
mKIAA1 E-TPEG--PATKVTTGGNQTGPNSSIRSLHSGPEMSKPGVLVSQLD-EPFSACSVDLAIS
       : :: .  :.  ...::..  :.::  .  :  :.:::: :.:..: .:.:.::.:::::
gi|149 EETPASLAPTGAAAAGGSSPWPDSSSNNWGSESELSKPGRLISRMDNQPLSVCSADLAIS
      380       390       400       410       420       430        

         370       380            390        400       410         
mKIAA1 PSSSLVSEPNHGPEENEYSS-----FRIQVDESPSADLL-GSPEPLATQQPQE-EEEHCA
        :.:: . :.. ::::::.:     .::.: :.:: ::: :.:.: . :. :: :.  :.
gi|149 SSDSLGTGPENVPEENEYDSGSVDSIRIHVAEDPSPDLLEGNPRPQTDQHLQEFEKTLCG
      440       450       460       470       480       490        

      420         430       440       450
mKIAA1 SSMPWAKWLG--ATSALLAVFLAVMLYRSRRLAQ
        ..::..:::  :..:.::.:::. ::: ::: :
gi|149 WTVPWVQWLGVAAAGAILAAFLAA-LYR-RRLLQ
      500       510       520         530

>>gi|114680729|ref|XP_525410.2| PREDICTED: virus-induced  (540 aa)
 initn: 817 init1: 321 opt: 753  Z-score: 705.3  bits: 140.0 E(): 1.4e-30
Smith-Waterman score: 1208;  48.671% identity (67.689% similar) in 489 aa overlap (1-448:54-539)

                                             10        20        30
mKIAA1                               TLWGLFNNLQRRPGWVEVFIRALQICELPG
                                     ::: :::.::::::::: :: ::. :::  
gi|114 VVEILPYLPCLTARDQDRLRATCTLSGNRDTLWHLFNTLQRRPGWVEYFIAALRGCELVD
            30        40        50        60        70        80   

               40        50        60        70        80          
mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRET-PSCPK
       :::.:. :::::  : :: :  .::. :..::   :: . : .:.:: .. ::  :: : 
gi|114 LADEVASVYQSY-QPRTSDRPPDPLEPPSLPAERPGPPTPAAAHSIPYNSCREKEPSYPM
            90        100       110       120       130       140  

      90       100       110         120       130       140       
mKIAA1 PVQDTQPPESPVENSEQLLQTNSG-AVARM-SGGSLIPSPNQQALSPQPSREHQEQEPEL
       :::.:: :::: :.::: ::: :  :. :  .:: :  : .  ::::  :  ::::. ::
gi|114 PVQETQVPESPGESSEQALQTLSPRAIPRNPDGGPLESSSDLAALSPLTSSGHQEQDTEL
            150       160       170       180       190       200  

       150       160       170       180       190       200       
mKIAA1 GGAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSA
       :..:.:...:    . :::::.:::::: :.. :.. : : :::..:. ::.:::: : :
gi|114 GSTHTAGATSSLTPSRGPVSPSVSFQPLARSTPRASRLPGPTVSVVSTGTSFSSSSPGLA
            210       220       230       240       250       260  

             210        220             230       240              
mKIAA1 FA------KGA-GDQAKAATCFS------TTLTNSVTTSSVPSPRL---VP-----VKTM
        :      .:: .:::.   : :      ..: ..: :. .:   .   ::     :.:.
gi|114 SAGAAEGKQGAESDQAEPIICSSGAEAPANSLPSKVPTTLMPVNTVALKVPANPASVSTV
            270       280       290       300       310       320  

        250       260       270       280       290         300    
mKIAA1 SSKLPLSSKSTAAMTSTVLTNTAPSKLPSNSVYAGTVPSRVPASVA--KAPANTIPPERN
        :::: :::  .:. :.:::: :::::: ::. :: :::.::.:..  :. :.:.: . .
gi|114 PSKLPTSSKPPGAVPSNVLTNPAPSKLPINSTRAGMVPSKVPTSMVLTKVSASTVPTDGS
            330       340       350       360       370       380  

          310       320       330       340       350       360    
mKIAA1 SKQAKETPEGPATKVTTGGNQTGPNSSIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAI
       :.. .::: .:.   .:::...  .:: ..   : :.::::::.::.: :::.:  ::::
gi|114 SRN-EETPAAPTPVGATGGSSAWLDSSSENRGLGSELSKPGVLASQVDSPFSGCFEDLAI
             390       400       410       420       430       440 

          370       380          390                  400       410
mKIAA1 SPSSSLVSEPNHGPEENEYSS---FRIQVDESPSADLL-----------GSPEPLATQQP
       : :.::   : ::::::::.:   : :.: :.:: .::           :.:.: . .. 
gi|114 SASTSLGMGPCHGPEENEYKSEGTFGIHVAENPSIQLLEGNPGPPADPDGGPRPQTDRKF
             450       460       470       480       490       500 

              420        430       440       450
mKIAA1 QEEEEHCASSMPWAKWLG-ATSALLAVFLAVMLYRSRRLAQ
       ::.:  :    : : ::  :....:.: : :.::: :::  
gi|114 QEREVPCHRPSPGALWLQVAVTGVLVVTLLVVLYR-RRLH 
             510       520       530        540 

>>gi|31455461|dbj|BAC77356.1| putative NFkB activating p  (540 aa)
 initn: 818 init1: 325 opt: 751  Z-score: 703.5  bits: 139.6 E(): 1.8e-30
Smith-Waterman score: 1215;  48.671% identity (67.689% similar) in 489 aa overlap (1-448:54-539)

                                             10        20        30
mKIAA1                               TLWGLFNNLQRRPGWVEVFIRALQICELPG
                                     ::: :::.::::::::: :: ::. :::  
gi|314 VVEILPYLPCLTARDQDRPRATCTLSGNRDTLWHLFNTLQRRPGWVEYFIAALRGCELVD
            30        40        50        60        70        80   

               40        50        60        70        80          
mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRET-PSCPK
       :::.:. :::::  : :: :  .::. :..::   :: . : .:.:: .. ::  :: : 
gi|314 LADEVASVYQSY-QPRTSDRPPDPLEPPSLPAERPGPPTPAAAHSIPYNSCREKEPSYPM
            90        100       110       120       130       140  

      90       100       110         120       130       140       
mKIAA1 PVQDTQPPESPVENSEQLLQTNSG-AVARM-SGGSLIPSPNQQALSPQPSREHQEQEPEL
       :::.:: :::: ::::: ::: :  :. :  .:: :  : .  ::::  :  ::::. ::
gi|314 PVQETQAPESPGENSEQALQTLSPRAIPRNPDGGPLESSSDLAALSPLTSSGHQEQDTEL
            150       160       170       180       190       200  

       150       160       170       180       190       200       
mKIAA1 GGAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSA
       :..:.:...:    . :::::.:::::: :.. :.. : : : :..:. ::.:::: : :
gi|314 GSTHTAGATSSLTPSRGPVSPSVSFQPLARSTPRASRLPGPTGSVVSTGTSFSSSSPGLA
            210       220       230       240       250       260  

             210        220             230       240              
mKIAA1 FA------KGA-GDQAKAATCFS------TTLTNSVTTSSVPSPRL---VP-----VKTM
        :      .:: .:::.   : :      ..: ..: :. .:   .   ::     :.:.
gi|314 SAGAAEGKQGAESDQAEPIICSSGAEAPANSLPSKVPTTLMPVNTVALKVPANPASVSTV
            270       280       290       300       310       320  

        250       260       270       280       290         300    
mKIAA1 SSKLPLSSKSTAAMTSTVLTNTAPSKLPSNSVYAGTVPSRVPASVA--KAPANTIPPERN
        :::: :::  .:. :..::: :::::: ::. .: :::.::.:..  :.::.:.: . .
gi|314 PSKLPTSSKPPGAVPSNALTNPAPSKLPINSTRVGMVPSKVPTSMVLTKVPASTVPTDGS
            330       340       350       360       370       380  

          310       320       330       340       350       360    
mKIAA1 SKQAKETPEGPATKVTTGGNQTGPNSSIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAI
       :.. .::: .:.   .:::...  .:: ..   : :.::::::.::.: :::.:  ::::
gi|314 SRN-EETPAAPTPAGATGGSSAWLDSSSENRGLGSELSKPGVLASQVDSPFSGCFEDLAI
             390       400       410       420       430       440 

          370       380          390                  400       410
mKIAA1 SPSSSLVSEPNHGPEENEYSS---FRIQVDESPSADLL-----------GSPEPLATQQP
       : :.::   : ::::::::.:   : :.: :.:: .::           :.:.: : .. 
gi|314 SASTSLGMGPCHGPEENEYKSEGTFGIHVAENPSIQLLEGNPGPPADPDGGPRPQADRKF
             450       460       470       480       490       500 

              420        430       440       450
mKIAA1 QEEEEHCASSMPWAKWLG-ATSALLAVFLAVMLYRSRRLAQ
       ::.:  :    : : ::  :....:.: : :.::: :::  
gi|314 QEREVPCHRPSPGALWLQVAVTGVLVVTLLVVLYR-RRLH 
             510       520       530        540 




450 residues in 1 query   sequences
2727779818 residues in 7921681 library sequences
 Tcomplib [34.26] (2 proc)
 start: Fri Mar 13 12:25:28 2009 done: Fri Mar 13 12:32:12 2009
 Total Scan time: 912.050 Total Display time:  0.130

Function used was FASTA [version 34.26.5 April 26, 2007]