# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msj04376.fasta.nr -Q ../query/mKIAA1271.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1271, 450 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7912795 sequences Expectation_n fit: rho(ln(x))= 6.4249+/-0.000198; mu= 5.7209+/- 0.011 mean_var=116.3520+/-21.910, 0's: 24 Z-trim: 53 B-trim: 0 in 0/65 Lambda= 0.118901 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81170679|sp|Q8VCF0.1|MAVS_MOUSE RecName: Full=M ( 503) 2948 516.5 6e-144 gi|148696369|gb|EDL28316.1| RIKEN cDNA D430028G21, ( 505) 2948 516.5 6e-144 gi|81170680|sp|Q66HG9.1|MAVS_RAT RecName: Full=Mit ( 507) 2267 399.7 8.8e-109 gi|74148991|dbj|BAE32168.1| unnamed protein produc ( 333) 2133 376.5 5.3e-102 gi|119507309|dbj|BAF42542.1| mitochondrial antivir ( 524) 789 146.1 1.9e-32 gi|86438388|gb|AAI12825.1| Virus-induced signaling ( 520) 784 145.3 3.4e-32 gi|169790858|ref|NP_001116081.1| virus-induced sig ( 520) 781 144.8 4.9e-32 gi|149733452|ref|XP_001496611.1| PREDICTED: simila ( 530) 770 142.9 1.8e-31 gi|114680729|ref|XP_525410.2| PREDICTED: virus-ind ( 540) 753 140.0 1.4e-30 gi|31455461|dbj|BAC77356.1| putative NFkB activati ( 540) 751 139.6 1.8e-30 gi|47115748|sp|Q7Z434.2|MAVS_HUMAN RecName: Full=M ( 540) 748 139.1 2.5e-30 gi|27924145|gb|AAH44952.1| Virus-induced signaling ( 540) 746 138.8 3.2e-30 gi|110339453|gb|ABG67965.1| virus-induced signalin ( 541) 739 137.6 7.4e-30 gi|10435844|dbj|BAB14684.1| unnamed protein produc ( 404) 716 133.5 9.2e-29 gi|119630887|gb|EAX10482.1| virus-induced signalin ( 484) 556 106.1 1.9e-20 gi|158257002|dbj|BAF84474.1| unnamed protein produ ( 399) 451 88.1 4.4e-15 gi|220972438|gb|EED90770.1| predicted protein [Tha (1524) 283 59.7 5.8e-06 gi|209585698|gb|ACI64383.1| predicted protein [Tha (3283) 272 58.1 3.8e-05 gi|119917405|ref|XP_001250260.1| PREDICTED: simila ( 103) 238 51.1 0.00016 gi|70905641|gb|AAZ14280.1| proteophosphoglycan ppg (7194) 263 56.8 0.0002 gi|134065504|emb|CAM43271.1| proteophosphoglycan p (5384) 260 56.2 0.00023 gi|134065503|emb|CAM43270.1| proteophosphoglycan p (4324) 258 55.8 0.00025 gi|145011690|gb|EDJ96346.1| hypothetical protein M ( 804) 245 53.0 0.00032 gi|163667088|gb|ABY33454.1| autotransporter-associ (1320) 246 53.3 0.00042 gi|70905643|gb|AAZ14282.1| proteophosphoglycan ppg (2425) 249 54.0 0.00047 gi|99077761|emb|CAK18547.1| cell surface flocculin (1630) 246 53.4 0.00049 gi|194157432|gb|EDW72333.1| GK20868 [Drosophila wi (1574) 244 53.0 0.00061 gi|154690530|gb|ABS83845.1| Hypothetical protein C ( 825) 239 52.0 0.00068 gi|34528235|dbj|BAC85473.1| unnamed protein produc ( 138) 227 49.3 0.00072 gi|119397654|gb|EAW08085.1| conserved hypothetical ( 577) 236 51.3 0.00073 gi|70905640|gb|AAZ14279.1| proteophosphoglycan ppg (1435) 241 52.5 0.00081 gi|223541814|gb|EEF43362.1| protein binding protei ( 829) 237 51.6 0.00086 gi|194389262|dbj|BAG65619.1| unnamed protein produ (1935) 242 52.8 0.00091 gi|109123224|ref|XP_001099067.1| PREDICTED: hypoth ( 943) 237 51.7 0.00095 gi|194183437|gb|EDW97048.1| GE24546 [Drosophila ya ( 879) 233 50.9 0.0014 gi|73955483|ref|XP_858680.1| PREDICTED: similar to (1888) 237 51.9 0.0016 gi|47213833|emb|CAG00637.1| unnamed protein produc (4522) 242 53.0 0.0017 gi|70905642|gb|AAZ14281.1| proteophosphoglycan 5 [ (17392) 250 54.9 0.0019 gi|134078510|emb|CAK40432.1| unnamed protein produ (1257) 233 51.1 0.0019 gi|133323|sp|P11414.1|RPB1_CRIGR RecName: Full=DNA ( 467) 226 49.5 0.0021 gi|73955477|ref|XP_858553.1| PREDICTED: similar to (1891) 234 51.4 0.0023 gi|73955475|ref|XP_858521.1| PREDICTED: similar to (1908) 234 51.4 0.0023 gi|73955461|ref|XP_858255.1| PREDICTED: similar to (1922) 234 51.4 0.0023 gi|73955439|ref|XP_849064.1| PREDICTED: similar to (1922) 234 51.4 0.0023 gi|73955459|ref|XP_858210.1| PREDICTED: similar to (1923) 234 51.4 0.0023 gi|73955467|ref|XP_858373.1| PREDICTED: similar to (1924) 234 51.4 0.0023 gi|194133050|gb|EDW54618.1| GM18689 [Drosophila se ( 678) 227 49.8 0.0024 gi|194375696|dbj|BAG57192.1| unnamed protein produ ( 855) 228 50.1 0.0026 gi|149363857|gb|ABR24162.1| virus-induced signalin ( 124) 215 47.2 0.0028 gi|134073236|emb|CAM71958.1| proteophosphoglycan p (5967) 238 52.5 0.0035 >>gi|81170679|sp|Q8VCF0.1|MAVS_MOUSE RecName: Full=Mitoc (503 aa) initn: 2948 init1: 2948 opt: 2948 Z-score: 2740.7 bits: 516.5 E(): 6e-144 Smith-Waterman score: 2948; 100.000% identity (100.000% similar) in 450 aa overlap (1-450:54-503) 10 20 30 mKIAA1 TLWGLFNNLQRRPGWVEVFIRALQICELPG :::::::::::::::::::::::::::::: gi|811 VLEILPYLSCLTASDQDRLRASYRQIGNRDTLWGLFNNLQRRPGWVEVFIRALQICELPG 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRETPSCPKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRETPSCPKP 90 100 110 120 130 140 100 110 120 130 140 150 mKIAA1 VQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 VQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELGGA 150 160 170 180 190 200 160 170 180 190 200 210 mKIAA1 HAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAFAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 HAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAFAK 210 220 230 240 250 260 220 230 240 250 260 270 mKIAA1 GAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTNTAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 GAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTNTAP 270 280 290 300 310 320 280 290 300 310 320 330 mKIAA1 SKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTGPNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 SKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTGPNS 330 340 350 360 370 380 340 350 360 370 380 390 mKIAA1 SIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFRIQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 SIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFRIQV 390 400 410 420 430 440 400 410 420 430 440 450 mKIAA1 DESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRRLAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 DESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRRLAQ 450 460 470 480 490 500 >>gi|148696369|gb|EDL28316.1| RIKEN cDNA D430028G21, iso (505 aa) initn: 2948 init1: 2948 opt: 2948 Z-score: 2740.6 bits: 516.5 E(): 6e-144 Smith-Waterman score: 2948; 100.000% identity (100.000% similar) in 450 aa overlap (1-450:56-505) 10 20 30 mKIAA1 TLWGLFNNLQRRPGWVEVFIRALQICELPG :::::::::::::::::::::::::::::: gi|148 VLEILPYLSCLTASDQDRLRASYRQIGNRDTLWGLFNNLQRRPGWVEVFIRALQICELPG 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRETPSCPKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRETPSCPKP 90 100 110 120 130 140 100 110 120 130 140 150 mKIAA1 VQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELGGA 150 160 170 180 190 200 160 170 180 190 200 210 mKIAA1 HAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAFAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAFAK 210 220 230 240 250 260 220 230 240 250 260 270 mKIAA1 GAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTNTAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTNTAP 270 280 290 300 310 320 280 290 300 310 320 330 mKIAA1 SKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTGPNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTGPNS 330 340 350 360 370 380 340 350 360 370 380 390 mKIAA1 SIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFRIQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFRIQV 390 400 410 420 430 440 400 410 420 430 440 450 mKIAA1 DESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRRLAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRRLAQ 450 460 470 480 490 500 >>gi|81170680|sp|Q66HG9.1|MAVS_RAT RecName: Full=Mitocho (507 aa) initn: 1774 init1: 1163 opt: 2267 Z-score: 2109.3 bits: 399.7 E(): 8.8e-109 Smith-Waterman score: 2267; 79.075% identity (88.326% similar) in 454 aa overlap (1-450:54-507) 10 20 30 mKIAA1 TLWGLFNNLQRRPGWVEVFIRALQICELPG ::: :::.:::::::::::::::.:::::: gi|811 VLEILPYLSCLTTSDQDRLRASYKQLGNQGTLWELFNTLQRRPGWVEVFIRALRICELPG 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRETPSCPKP ::.:::::::::::::.::.::.::: : .:..:: ::::: ::.::: :... :. ::: gi|811 LAEQVTRVYQSYLPPGASLHSLDPLQSPRIPTTVSEPSAFAAGHTIPDSGFQDKPGYPKP 90 100 110 120 130 140 100 110 120 130 140 150 mKIAA1 VQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELGGA :::::::.:::::::. :.: ::. :::: ::: ::: :::::::::: :::::::: gi|811 VQDTQPPKSPVENSEEPPQANFGAIPRMSGDSLISSPNPPALSPQPSREHPEQEPELGGP 150 160 170 180 190 200 160 170 180 190 200 210 mKIAA1 HAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAFAK .::: ::::::::::::::::::::: : :::: ::::::::: :.:::::::::::: gi|811 STANVDSVPIATYGPVSPTVSFQPLPRIAPRTNLSPGVTVSALSAKTTLSSSSTGSAFAK 210 220 230 240 250 260 220 230 240 250 260 mKIAA1 GAGDQAKAATCFSTTL---TNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTN ::::::::::: :: ::::::::::: . :::.:::::::.:.::::: ::: :: gi|811 GAGDQAKAATCVSTKEGVPTNSVTTSSVPSIKPVPVNTMSSKLPISTKSTAATPSTVPTN 270 280 290 300 310 320 270 280 290 300 310 320 mKIAA1 TAPSKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTG :::::: ::::.: :::.: :::::: :.:.:::::.:::::: :.::: ::::.. : gi|811 IAPSKLPINSVYTGIVPSKVTASVAKASASTMPPERNNKQAKETLEAPATVVTTGSSLTR 330 340 350 360 370 380 330 340 350 360 370 380 mKIAA1 PNSSIRSLHSGPEMSKPGVLVSQLD-EPFSACSVDLAISPSSSLVSEPNHGPEENEYSSF :. : ::::::::.:::::::::.: :::::::.:::::::.:: ::::::::::::::: gi|811 PDISSRSLHSGPELSKPGVLVSQVDNEPFSACSMDLAISPSTSLGSEPNHGPEENEYSSF 390 400 410 420 430 440 390 400 410 420 430 440 mKIAA1 RIQVDESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSR :::::.:::.::::::::::::: :::: ::::. :::::::::::::.:::::::::: gi|811 RIQVDKSPSVDLLGSPEPLATQQSPEEEEPCASSVSWAKWLGATSALLAAFLAVMLYRSR 450 460 470 480 490 500 450 mKIAA1 RLAQ .::: gi|811 HLAQ >>gi|74148991|dbj|BAE32168.1| unnamed protein product [M (333 aa) initn: 2133 init1: 2133 opt: 2133 Z-score: 1987.5 bits: 376.5 E(): 5.3e-102 Smith-Waterman score: 2133; 100.000% identity (100.000% similar) in 333 aa overlap (118-450:1-333) 90 100 110 120 130 140 mKIAA1 PKPVQDTQPPESPVENSEQLLQTNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPEL :::::::::::::::::::::::::::::: gi|741 MSGGSLIPSPNQQALSPQPSREHQEQEPEL 10 20 30 150 160 170 180 190 200 mKIAA1 GGAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 GGAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSA 40 50 60 70 80 90 210 220 230 240 250 260 mKIAA1 FAKGAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FAKGAGDQAKAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLPLSSKSTAAMTSTVLTN 100 110 120 130 140 150 270 280 290 300 310 320 mKIAA1 TAPSKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 TAPSKLPSNSVYAGTVPSRVPASVAKAPANTIPPERNSKQAKETPEGPATKVTTGGNQTG 160 170 180 190 200 210 330 340 350 360 370 380 mKIAA1 PNSSIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PNSSIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAISPSSSLVSEPNHGPEENEYSSFR 220 230 240 250 260 270 390 400 410 420 430 440 mKIAA1 IQVDESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 IQVDESPSADLLGSPEPLATQQPQEEEEHCASSMPWAKWLGATSALLAVFLAVMLYRSRR 280 290 300 310 320 330 450 mKIAA1 LAQ ::: gi|741 LAQ >>gi|119507309|dbj|BAF42542.1| mitochondrial antiviral s (524 aa) initn: 968 init1: 452 opt: 789 Z-score: 738.9 bits: 146.1 E(): 1.9e-32 Smith-Waterman score: 1084; 47.107% identity (66.529% similar) in 484 aa overlap (1-450:54-524) 10 20 30 mKIAA1 TLWGLFNNLQRRPGWVEVFIRALQICELPG ::: ::..:.:: :::. :: ::.:::: gi|119 VLEILPYLSCLTASDQDRLRASFERWGNQGTLWDLFDSLRRRSGWVQSFIGALRICELSD 30 40 50 60 70 80 40 50 60 70 80 mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRET-PSCPK :::.:.::::. : ... ::. :. :: . ::: : . .:: .: :: :: : gi|119 LADEVSRVYQNSLLRNSN-SPPAPLEPPSTPAEAPGPSRPAVAPSIPHNGYREDEPSYPM 90 100 110 120 130 140 90 100 110 120 130 140 mKIAA1 PVQDTQPPESPVENSEQLLQT-NSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELG :::::: ::.: :.:. : ::::: . :: : :: . :::: : ::.:. ::: gi|119 PVQDTQSPEAPGESSKTAPQPPNSGAVLKRPGGPLEPSSDV-ALSPLTSGGHQKQDTELG 150 160 170 180 190 200 150 160 170 180 190 200 mKIAA1 GAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAF .::.:...: : . :::::::::::: :.. :.. : : ::. .::::: : gi|119 SAHTAGTVSSPTSPRGPVSPTVSFQPLARSTPRASRLPGPPVST-------ASSSTGLAS 210 220 230 240 250 210 220 230 240 250 260 mKIAA1 AKGAGDQAKAATCF--STTLTNSVTTSSVPSPRLVPVK-----TMSSKLPLSSKSTAAMT : :::::..:. : . . :.:::.: ::: ::.. :: :::: : : .::. gi|119 AGGAGDQVEATICSGGAGVPTTSVTASMVPSK--VPTNSAFASTMPSKLPTSLKPPGAMS 260 270 280 290 300 310 270 280 290 300 mKIAA1 STVLTNTAPSKLPSNSVYAGTVPSRVP-----------ASVA-KAPANTIPPERNS-KQA ..: ..:::::: ::. :.. .:: ..:: :.:::: : :.: . gi|119 TNVSPSVAPSKLPINSTRPGAMSPKVPTGLLPDHRKPTSTVASKVPANTGPTIRSSNRPE 320 330 340 350 360 370 310 320 330 340 350 360 mKIAA1 KETPEGPATKVTT-GGNQTGPNS-SIRSLHSGPEMSKPGVLVSQLD-EPFSACSVDLAIS :::: .:: :. ::.. :.: : : ::.:::: :::..: .:::. : ::::: gi|119 KETPASPAPIGTAAGGTSPWPDSNSDRWDSEEPELSKPGRLVSRMDSQPFSGSSEDLAIS 380 390 400 410 420 430 370 380 390 400 410 mKIAA1 PSSSLVSEPNHGPEENEYSSF-RIQVDESPSADLLG-SPEPLATQQPQEEEE-----HCA :. : : :.. :::::: : :... .::. .: :: ::.... : ::: . . gi|119 YSNPLGSGPDNTPEENEYVSVDTIRIQGDPSTPPVGDSPGPLTASEFQAEEELEEGLEEV 440 450 460 470 480 490 420 430 440 450 mKIAA1 SSMPWAKWLGAT--SALLAVFLAVMLYRSRRLAQ .. : :.:.. ..:::..:: :::: ::: : gi|119 KTEARAPWVGVAVVGVLLATLLA-MLYR-RRLPQ 500 510 520 >>gi|86438388|gb|AAI12825.1| Virus-induced signaling ada (520 aa) initn: 949 init1: 288 opt: 784 Z-score: 734.3 bits: 145.3 E(): 3.4e-32 Smith-Waterman score: 1123; 47.170% identity (67.505% similar) in 477 aa overlap (1-450:54-520) 10 20 30 mKIAA1 TLWGLFNNLQRRPGWVEVFIRALQICELPG :::.::. :.:: :::. :::::. :: gi|864 VLDILPHLSCLTINDQDRLRAHFDRWGNQGTLWNLFDILRRRNGWVDSFIRALRACEHTV 30 40 50 60 70 80 40 50 60 70 80 mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRE-TPSCPK :::.:..:::: :: . . . ::. :..:: . ::. : . .:::.: : :: : gi|864 LADEVAHVYQSNLPRSPN-HPPAPLEPPSIPAEIPRPSTPAVAPSIPDNGHTEYEPSYPV 90 100 110 120 130 140 90 100 110 120 130 140 mKIAA1 PVQDTQPPESPVENSEQLLQ-TNSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELG :::::::::: ::::. : ..:::: . :: : : . ::: : ::::. ::: gi|864 PVQDTQPPESLGENSEKAPQPSHSGAVLKRLGGPLEPLSDTVALSTLTSSVHQEQDTELG 150 160 170 180 190 200 150 160 170 180 190 200 mKIAA1 GAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAF ..:.:.:.: . :::::::::::: :.. :.. : : ::: :. : :::::: . gi|864 NTHTAGVVSSSTSLRGPVSPTVSFQPLARSTPRASRLPGPPVSAPSVGT--SSSSTGLTS 210 220 230 240 250 260 210 220 230 240 250 260 mKIAA1 AKGAGDQAKAATCFSTTLT--NSVTTSSVPSPRLVPVKT-----MSSKLPLSSKSTAAMT : :::::.... : : . . : ...:.::: ::... . :::: : : .: gi|864 AGGAGDQTEGTICSSGAGVPNNPMAASTVPSK--VPTNSAFGSSVPSKLPTSLKPPGA-- 270 280 290 300 310 270 280 290 300 mKIAA1 STVLTNTAPSKLPSNSVYAGTVPSRVPASVA---KAPANTIPPE---------RNSKQ-A : :: :::.:: ::: .: :: .::.: . ::.:.: . :.:.. . gi|864 --VPTNLAPSRLPINSVRSGMVPPKVPTSGIPDHRIPASTVPSKVPANTRLTIRSSNRLV 320 330 340 350 360 370 310 320 330 340 350 360 mKIAA1 KETPEGPA-TKVTTGGNQTGPNSSIRSLHSGPEMSKPGVLVSQLD-EPFSACSVDLAISP :::: .:. : ..:::.. :.:: : :.:::: :::..: .:::.::.::::: gi|864 KETPASPVPTGTATGGTSLWPDSSSDCCGSELELSKPGRLVSRMDSQPFSVCSADLAISH 380 390 400 410 420 430 370 380 390 400 410 420 mKIAA1 SSSLVSEPNHGPEENEYSSF-RIQVDESPSADLLG-SPEPLATQQPQEEEE-HCASSMPW :.:: :...:::::: : :.. :.::..::: :: .: . .: .: . .::: gi|864 SNSLGMGPDNAPEENEYVSEDTIRIHENPSTSLLGDSPGTYTTPEEDELKELPVVRTMPW 440 450 460 470 480 490 430 440 450 mKIAA1 AKWLGATSALLAVFLAVMLYRSRRLAQ :.:::.. : . : . ::: ::: : gi|864 ASWLGVAMAGALLVLLASLYR-RRLPQ 500 510 520 >>gi|169790858|ref|NP_001116081.1| virus-induced signali (520 aa) initn: 989 init1: 585 opt: 781 Z-score: 731.5 bits: 144.8 E(): 4.9e-32 Smith-Waterman score: 1116; 47.589% identity (67.296% similar) in 477 aa overlap (1-450:54-520) 10 20 30 mKIAA1 TLWGLFNNLQRRPGWVEVFIRALQICELPG ::: :::.:.:: :::: ::.::..::: . gi|169 VLEILPYLSCLTTSDQDRLRASYQLWGNQGTLWELFNSLRRRTGWVESFIKALRVCELAS 30 40 50 60 70 80 40 50 60 70 80 mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRET-PSCPK :::.:.::::: : :.: . : . :: : :: : : . . : .: :: :: : gi|169 LADEVARVYQSNLS-GVSNHPPAPAEPQLVPAEVPGPPAPAVAPSTPTNGYREEEPSFPL 90 100 110 120 130 140 90 100 110 120 130 140 mKIAA1 PVQDTQPPESPVENSEQLLQT-NSGAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELG :::::: ::: :.:... : .:::: : .: :: .. :..: . ::::. :: gi|169 PVQDTQLPESLEESSKKVPQMPHSGAVRRPAGPRE-PSSDMAAVNPLTASGHQEQDTGLG 150 160 170 180 190 200 150 160 170 180 190 200 mKIAA1 GAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAF ::: :..:: .. :::::::::.:: :. :.. : . :::. .:. .::: ::: gi|169 GAHIAGTASGLTSARGPVSPTVSFKPLSRSIPRASRLPA--PSALALSTGTTSSSPGSAS 210 220 230 240 250 210 220 230 240 250 260 mKIAA1 AKGAGDQAKAATC--FSTTLTNSVTTSSVPS--PRLVPVKTMS-SKLPLSSKSTAAMTST : :::...:. : .. . :...:::..:: : :. :::: ::: ...: .: gi|169 AGVAGDHGEATICSTMAGVSTGALTTSTAPSKVPTHSTFDRMAPSKLPASSKPSGTMPTT 260 270 280 290 300 310 270 280 290 300 310 mKIAA1 VLTNTAPSKLPSNSVYAGTVPSRVPASV------------AKAPANTIPPERNSKQAKET : ::::: ::. ::::: ::::.. .:.::::.: .. . :: gi|169 SLP---PSKLPINSTRAGTVPPRVPAGLVPDHKMSASTVPSKGPANTVPSISSNVPSGET 320 330 340 350 360 370 320 330 340 350 360 mKIAA1 PEGPA-TKVTTGGNQTGPNSSIRSLHSGPEMSKPGVLVSQLD-EPFSACSVDLAISPSSS .:. : ..: . : . : . : :.:::: :.::.: ::::.::.:::.: : : gi|169 ATAPVPTDISTRDSLPGLDRSSAGWGSELELSKPGRLASQVDSEPFSGCSADLALSYSRS 380 390 400 410 420 430 370 380 390 400 410 420 mKIAA1 LVSEPNHGPEENEYSS---FRIQVDESPSADLL-GSPEPLATQQPQEEEEHCASSMPWAK : . :...::::::.: .:::: ..:::::: .: : :: :: ::: .: :: gi|169 LGAGPDNAPEENEYQSVDSIRIQVVQDPSADLLEHNPGPRATPQPTVEEEPVQAS-SWAP 440 450 460 470 480 490 430 440 450 mKIAA1 WLGA--TSALLAVFLAVMLYRSRRLAQ :::. :...::..::: ::: ::: : gi|169 WLGVATTGVFLAMLLAV-LYR-RRLLQ 500 510 520 >>gi|149733452|ref|XP_001496611.1| PREDICTED: similar to (530 aa) initn: 814 init1: 301 opt: 770 Z-score: 721.2 bits: 142.9 E(): 1.8e-31 Smith-Waterman score: 1147; 47.727% identity (68.182% similar) in 484 aa overlap (1-450:54-530) 10 20 30 mKIAA1 TLWGLFNNLQRRPGWVEVFIRALQICELPG :: ::..:.:: :::. .: ::. ::: : gi|149 VLEILPYLSCLTTSDQDRLRATYERWGNQDTLLELFTSLRRRNGWVHSLIGALRACELSG 30 40 50 60 70 80 40 50 60 70 80 mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLR-ETPSCPK :::.:.:.:.: :: :: : ::. . :: : :: : . . : .: : : :: : gi|149 LADEVARIYHSSLPR-TSNRPPAPLEPSSVPAEVPEPSIPAEAPSAPHNGYRGEEPSYPM 90 100 110 120 130 140 90 100 110 120 130 140 mKIAA1 PVQDTQPPESPVENSEQLLQTNS-GAVARMSGGSLIPSPNQQALSPQPSREHQEQEPELG :::::.::: :.:.. .: : ::: : : : :: . : :: : :::. ::: gi|149 PVQDTRPPEPEGESSRKAPETPSPGAVLRRPDGPLEPSSDLAATSPLTSSGPQEQDTELG 150 160 170 180 190 200 150 160 170 180 190 200 mKIAA1 GAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAF ..:.:...: . :::::::::::: :.. :.. : : :::::.:: ::::: : gi|149 STHSAGMVSGLTSPRGPVSPTVSFQPLARSTPRASRLPGPPVSALSTDT--SSSSTILAS 210 220 230 240 250 260 210 220 230 240 250 260 mKIAA1 AKGAGDQAKAATCFSTTL--TNSVTTSSVPSPRLVPVK-----TMSSKLPLSSKSTAAMT . .:::.:.:. : : . :.:.:::.::: ::.: :. :::: ::: .. gi|149 SGSAGDHAEATICSSGVEVPTTSMTTSTVPSK--VPTKPAFPSTVPSKLPTSSKPPGTTP 270 280 290 300 310 270 280 290 300 mKIAA1 STVLTNTAPSKLPSNSVYAGTVPSRVPASVA------------KAPANTIPPERNSKQAK . : .: :::::: ::. ::::: .: .:.: :.::::. :.:.. . gi|149 TKVPANQAPSKLPINSTRAGTVPPKVATSLAPDHRIPMSMMPSKVPANTVRTIRSSQRPE 320 330 340 350 360 370 310 320 330 340 350 360 mKIAA1 E-TPEG--PATKVTTGGNQTGPNSSIRSLHSGPEMSKPGVLVSQLD-EPFSACSVDLAIS : :: . :. ...::.. :.:: . : :.:::: :.:..: .:.:.::.::::: gi|149 EETPASLAPTGAAAAGGSSPWPDSSSNNWGSESELSKPGRLISRMDNQPLSVCSADLAIS 380 390 400 410 420 430 370 380 390 400 410 mKIAA1 PSSSLVSEPNHGPEENEYSS-----FRIQVDESPSADLL-GSPEPLATQQPQE-EEEHCA :.:: . :.. ::::::.: .::.: :.:: ::: :.:.: . :. :: :. :. gi|149 SSDSLGTGPENVPEENEYDSGSVDSIRIHVAEDPSPDLLEGNPRPQTDQHLQEFEKTLCG 440 450 460 470 480 490 420 430 440 450 mKIAA1 SSMPWAKWLG--ATSALLAVFLAVMLYRSRRLAQ ..::..::: :..:.::.:::. ::: ::: : gi|149 WTVPWVQWLGVAAAGAILAAFLAA-LYR-RRLLQ 500 510 520 530 >>gi|114680729|ref|XP_525410.2| PREDICTED: virus-induced (540 aa) initn: 817 init1: 321 opt: 753 Z-score: 705.3 bits: 140.0 E(): 1.4e-30 Smith-Waterman score: 1208; 48.671% identity (67.689% similar) in 489 aa overlap (1-448:54-539) 10 20 30 mKIAA1 TLWGLFNNLQRRPGWVEVFIRALQICELPG ::: :::.::::::::: :: ::. ::: gi|114 VVEILPYLPCLTARDQDRLRATCTLSGNRDTLWHLFNTLQRRPGWVEYFIAALRGCELVD 30 40 50 60 70 80 40 50 60 70 80 mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRET-PSCPK :::.:. ::::: : :: : .::. :..:: :: . : .:.:: .. :: :: : gi|114 LADEVASVYQSY-QPRTSDRPPDPLEPPSLPAERPGPPTPAAAHSIPYNSCREKEPSYPM 90 100 110 120 130 140 90 100 110 120 130 140 mKIAA1 PVQDTQPPESPVENSEQLLQTNSG-AVARM-SGGSLIPSPNQQALSPQPSREHQEQEPEL :::.:: :::: :.::: ::: : :. : .:: : : . :::: : ::::. :: gi|114 PVQETQVPESPGESSEQALQTLSPRAIPRNPDGGPLESSSDLAALSPLTSSGHQEQDTEL 150 160 170 180 190 200 150 160 170 180 190 200 mKIAA1 GGAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSA :..:.:...: . :::::.:::::: :.. :.. : : :::..:. ::.:::: : : gi|114 GSTHTAGATSSLTPSRGPVSPSVSFQPLARSTPRASRLPGPTVSVVSTGTSFSSSSPGLA 210 220 230 240 250 260 210 220 230 240 mKIAA1 FA------KGA-GDQAKAATCFS------TTLTNSVTTSSVPSPRL---VP-----VKTM : .:: .:::. : : ..: ..: :. .: . :: :.:. gi|114 SAGAAEGKQGAESDQAEPIICSSGAEAPANSLPSKVPTTLMPVNTVALKVPANPASVSTV 270 280 290 300 310 320 250 260 270 280 290 300 mKIAA1 SSKLPLSSKSTAAMTSTVLTNTAPSKLPSNSVYAGTVPSRVPASVA--KAPANTIPPERN :::: ::: .:. :.:::: :::::: ::. :: :::.::.:.. :. :.:.: . . gi|114 PSKLPTSSKPPGAVPSNVLTNPAPSKLPINSTRAGMVPSKVPTSMVLTKVSASTVPTDGS 330 340 350 360 370 380 310 320 330 340 350 360 mKIAA1 SKQAKETPEGPATKVTTGGNQTGPNSSIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAI :.. .::: .:. .:::... .:: .. : :.::::::.::.: :::.: :::: gi|114 SRN-EETPAAPTPVGATGGSSAWLDSSSENRGLGSELSKPGVLASQVDSPFSGCFEDLAI 390 400 410 420 430 440 370 380 390 400 410 mKIAA1 SPSSSLVSEPNHGPEENEYSS---FRIQVDESPSADLL-----------GSPEPLATQQP : :.:: : ::::::::.: : :.: :.:: .:: :.:.: . .. gi|114 SASTSLGMGPCHGPEENEYKSEGTFGIHVAENPSIQLLEGNPGPPADPDGGPRPQTDRKF 450 460 470 480 490 500 420 430 440 450 mKIAA1 QEEEEHCASSMPWAKWLG-ATSALLAVFLAVMLYRSRRLAQ ::.: : : : :: :....:.: : :.::: ::: gi|114 QEREVPCHRPSPGALWLQVAVTGVLVVTLLVVLYR-RRLH 510 520 530 540 >>gi|31455461|dbj|BAC77356.1| putative NFkB activating p (540 aa) initn: 818 init1: 325 opt: 751 Z-score: 703.5 bits: 139.6 E(): 1.8e-30 Smith-Waterman score: 1215; 48.671% identity (67.689% similar) in 489 aa overlap (1-448:54-539) 10 20 30 mKIAA1 TLWGLFNNLQRRPGWVEVFIRALQICELPG ::: :::.::::::::: :: ::. ::: gi|314 VVEILPYLPCLTARDQDRPRATCTLSGNRDTLWHLFNTLQRRPGWVEYFIAALRGCELVD 30 40 50 60 70 80 40 50 60 70 80 mKIAA1 LADQVTRVYQSYLPPGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGLRET-PSCPK :::.:. ::::: : :: : .::. :..:: :: . : .:.:: .. :: :: : gi|314 LADEVASVYQSY-QPRTSDRPPDPLEPPSLPAERPGPPTPAAAHSIPYNSCREKEPSYPM 90 100 110 120 130 140 90 100 110 120 130 140 mKIAA1 PVQDTQPPESPVENSEQLLQTNSG-AVARM-SGGSLIPSPNQQALSPQPSREHQEQEPEL :::.:: :::: ::::: ::: : :. : .:: : : . :::: : ::::. :: gi|314 PVQETQAPESPGENSEQALQTLSPRAIPRNPDGGPLESSSDLAALSPLTSSGHQEQDTEL 150 160 170 180 190 200 150 160 170 180 190 200 mKIAA1 GGAHAANVASVPIATYGPVSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSA :..:.:...: . :::::.:::::: :.. :.. : : : :..:. ::.:::: : : gi|314 GSTHTAGATSSLTPSRGPVSPSVSFQPLARSTPRASRLPGPTGSVVSTGTSFSSSSPGLA 210 220 230 240 250 260 210 220 230 240 mKIAA1 FA------KGA-GDQAKAATCFS------TTLTNSVTTSSVPSPRL---VP-----VKTM : .:: .:::. : : ..: ..: :. .: . :: :.:. gi|314 SAGAAEGKQGAESDQAEPIICSSGAEAPANSLPSKVPTTLMPVNTVALKVPANPASVSTV 270 280 290 300 310 320 250 260 270 280 290 300 mKIAA1 SSKLPLSSKSTAAMTSTVLTNTAPSKLPSNSVYAGTVPSRVPASVA--KAPANTIPPERN :::: ::: .:. :..::: :::::: ::. .: :::.::.:.. :.::.:.: . . gi|314 PSKLPTSSKPPGAVPSNALTNPAPSKLPINSTRVGMVPSKVPTSMVLTKVPASTVPTDGS 330 340 350 360 370 380 310 320 330 340 350 360 mKIAA1 SKQAKETPEGPATKVTTGGNQTGPNSSIRSLHSGPEMSKPGVLVSQLDEPFSACSVDLAI :.. .::: .:. .:::... .:: .. : :.::::::.::.: :::.: :::: gi|314 SRN-EETPAAPTPAGATGGSSAWLDSSSENRGLGSELSKPGVLASQVDSPFSGCFEDLAI 390 400 410 420 430 440 370 380 390 400 410 mKIAA1 SPSSSLVSEPNHGPEENEYSS---FRIQVDESPSADLL-----------GSPEPLATQQP : :.:: : ::::::::.: : :.: :.:: .:: :.:.: : .. gi|314 SASTSLGMGPCHGPEENEYKSEGTFGIHVAENPSIQLLEGNPGPPADPDGGPRPQADRKF 450 460 470 480 490 500 420 430 440 450 mKIAA1 QEEEEHCASSMPWAKWLG-ATSALLAVFLAVMLYRSRRLAQ ::.: : : : :: :....:.: : :.::: ::: gi|314 QEREVPCHRPSPGALWLQVAVTGVLVVTLLVVLYR-RRLH 510 520 530 540 450 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 12:25:28 2009 done: Fri Mar 13 12:32:12 2009 Total Scan time: 912.050 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]