Comparison of KIAA cDNA sequences between mouse and human (KIAA1271)
<<Original sequence data>>
mouse mKIAA1271 (msj04376) length: 2587 bp, CDS: 2 - 1354
human KIAA1271 (hk06527) length: 4187 bp, CDS: 73 - 1701
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 237 - 237 1 0 0.0
CDS: 238 - 1710 921 433 32.0
3'UTR: 1711 - 3720 721 500 41.0
amino acid
CDS: 238 - 1710 232 256 52.5
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msj04376 1 .................................................. 1
hk06527 1 GGGTACCCGAGTCTCGTTTCCTCTCAGTCCATCCACCCTTCATGGGGCCA 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msj04376 1 .................................................. 1
hk06527 51 GAGCCCTCTCTCCAGAATCTGAGCAGCAATGCCGTTTGCTGAAGACAAGA 100
A A M P F A E D K T
101 ----+----*----+----*----+----*----+----*----+----* 150
msj04376 1 .................................................. 1
hk06527 101 CCTATAAGTATATCTGCCGCAATTTCAGCAATTTTTGCAATGTGGATGTT 150
Y K Y I C R N F S N F C N V D V
151 ----+----*----+----*----+----*----+----*----+----* 200
msj04376 1 .................................................. 1
hk06527 151 GTAGAGATTCTGCCTTACCTGCCCTGCCTCACAGCAAGAGACCAGGATCG 200
V E I L P Y L P C L T A R D Q D R
201 ----+----*----+----*----+----*----+----*----+----* 250
T L W G L
msj04376 1 ....................................CACACTCTGGGGAC 14
||| |||||| |
hk06527 201 ACTGCGGGCCACCTGCACACTCTCAGGGAACCGGGACACCCTCTGGCATC 250
L R A T C T L S G N R D T L W H L
251 ----+----*----+----*----+----*----+----*----+----* 300
F N N L Q R R P G W V E V F I R
msj04376 15 TCTTCAATAATCTCCAGCGCCGGCCTGGCTGGGTGGAGGTCTTCATCCGG 64
||||||||| || ||||| ||||| |||||||||||| |||||| |
hk06527 251 TCTTCAATACCCTTCAGCGGCGGCCCGGCTGGGTGGAGTACTTCATTGCG 300
F N T L Q R R P G W V E Y F I A
301 ----+----*----+----*----+----*----+----*----+----* 350
A L Q I C E L P G L A D Q V T R V
msj04376 65 GCACTGCAGATCTGTGAGCTGCCTGGGCTGGCTGATCAAGTGACTCGAGT 114
|||||| | ||||||||| || || || || ||||| | ||
hk06527 301 GCACTGAGGGGCTGTGAGCTAGTTGATCTCGCGGACGAAGTGGCCTCTGT 350
A L R G C E L V D L A D E V A S V
351 ----+----*----+----*----+----*----+----*----+----* 400
Y Q S Y L P R T S L R S L E P L
msj04376 115 TTATCAGAGCTACCTGCCTCCGGGGACCTCACTCCGCTCCCTAGAGCCAC 164
|| |||||||||| ||||| ||||||| ||| ||| ||| ||||
hk06527 351 CTACCAGAGCTACCAGCCTC...GGACCTCGGACCGTCCCCCAGACCCAC 397
Y Q S Y Q P R T S D R P P D P L
401 ----+----*----+----*----+----*----+----*----+----* 450
Q L P D F P A A V S G P S A F A
msj04376 165 TGCAGTTACCAGACTTTCCTGCTGCGGTTTCTGGACCCTCTGCATTTGCG 214
|| || ||| ||||||||| | | || ||| | || |||
hk06527 398 TGGAGCCACCGTCACTTCCTGCTGAGAGGCCAGGGCCCCCCACACCTGCT 447
E P P S L P A E R P G P P T P A
451 ----+----*----+----*----+----*----+----*----+----* 500
P G H N I P D H G L R E - P S C
msj04376 215 CCAGGTCACAACATCCCTGACCATGGCTTACGAGAGA...CACCAAGTTG 261
| | |||| |||||| || | ||| |||||| |||||||
hk06527 448 GCGGCCCACAGCATCCCCTACAACAGCTGCAGAGAGAAGGAGCCAAGTTA 497
A A H S I P Y N S C R E K E P S Y
501 ----+----*----+----*----+----*----+----*----+----* 550
P K P V Q D T Q P P E S P V E N S
msj04376 262 CCCCAAGCCTGTCCAGGACACCCAGCCACCAGAGTCCCCAGTAGAGAATT 311
||||| |||||||||||| |||||| | ||||||||||||| ||||||||
hk06527 498 CCCCATGCCTGTCCAGGAGACCCAGGCGCCAGAGTCCCCAGGAGAGAATT 547
P M P V Q E T Q A P E S P G E N S
551 ----+----*----+----*----+----*----+----*----+----* 600
E Q L L Q - N S G A V A R M -
msj04376 312 CAGAGCAACTCCTCCAGAC...CAACTCCGGGGCCGTCGCGAGGATGTC. 357
|||||||| ||| ||||| || | || | ||| || | |||| |
hk06527 548 CAGAGCAAGCCCTGCAGACGCTCAGCCCCAGAGCCATCCCAAGGAATCCA 597
E Q A L Q T L S P R A I P R N P
601 ----+----*----+----*----+----*----+----*----+----* 650
G G S L I P S P N Q Q A L S P Q
msj04376 358 ..TGGTGGCTCTTTGATACCCTCTCCTAACCAGCAGGCTCTCAGCCCTCA 405
||||||| | || |||| || ||| | || ||||||||||
hk06527 598 GATGGTGGCCCCCTGGAGTCCTCCTCTGACCTGGCAGCCCTCAGCCCTCT 647
D G G P L E S S S D L A A L S P L
651 ----+----*----+----*----+----*----+----*----+----* 700
P S R E H Q E Q E P E L G G A H A
msj04376 406 GCCCTCCAGAGAGCATCAAGAGCAAGAACCAGAACTGGGTGGCGCCCACG 455
| ||||||| | |||||| ||||| || |||||||||| | |||||
hk06527 648 GACCTCCAGCGGGCATCAGGAGCAGGACACAGAACTGGGCAGTACCCACA 697
T S S G H Q E Q D T E L G S T H T
701 ----+----*----+----*----+----*----+----*----+----* 750
A N V A S V P I A T Y G P V S P
msj04376 456 CAGCAAATGTTGCCTCTGTTCCCATAGCAACCTATGGACCTGTGTCTCCA 505
||||| || |||| | || | || || ||| ||||||||||||
hk06527 698 CAGCAGGTGCGACCTCCAGCCTCACACCATCCCGTGGGCCTGTGTCTCCA 747
A G A T S S L T P S R G P V S P
751 ----+----*----+----*----+----*----+----*----+----* 800
T V S F Q P L P R T A L R T N L L
msj04376 506 ACCGTTTCCTTCCAGCCCCTTCCACGTACTGCCCTGAGGACAAACCTCTT 555
| || |||||||||||||| | ||| | ||| ||| ||| || |||
hk06527 748 TCTGTCTCCTTCCAGCCCCTGGCCCGTTCCACCCCCAGGGCAAGCCGCTT 797
S V S F Q P L A R S T P R A S R L
801 ----+----*----+----*----+----*----+----*----+----* 850
S G V T V S A L S A D T S L S S S
msj04376 556 GTCTGGGGTCACAGTATCAGCCCTATCTGCTGATACCTCTTTGTCCTCCT 605
| |||| ||||| |||| ||||| ||| ||||| || |||||||
hk06527 798 GCCTGGACCCACAGGGTCAGTTGTATCTACTGGCACCTCCTTCTCCTCCT 847
P G P T G S V V S T G T S F S S S
851 ----+----*----+----*----+----*----+----*----+----* 900
S T G S A F A K G A -
msj04376 606 CGTCCACTGGATCAGCTTTTGCAAAGGGAGCTG................. 638
| ||| |||| | || | |||| || || |
hk06527 848 CATCCCCTGGCTTGGCCTCTGCAGGGGCTGCAGAGGGTAAACAGGGTGCA 897
S P G L A S A G A A E G K Q G A
901 ----+----*----+----*----+----*----+----*----+----* 950
D Q A K A A T C F S
msj04376 639 ....GTGACCAGGCCAAAGCTGCCACCTGTTTCAGT.............. 670
||||||||||| | || || ||| | ||||
hk06527 898 GAGAGTGACCAGGCCGAGCCTATCATCTGCTCCAGTGGGGCAGAGGCACC 947
E S D Q A E P I I C S S G A E A P
951 ----+----*----+----*----+----*----+----*----+----* 1000
T T L T N S V T T S S V P S P R
msj04376 671 ....ACTACACTCACCAATTCTGTGACTACCAGCTCAGTGCCTTCTCCCA 716
| | || || ||| |||||| || ||||| ||
hk06527 948 TGCCAACTCTCTGCCCTCCAAAGTGCCTACCACCTTGATGCCTGTGAACA 997
A N S L P S K V P T T L M P V N T
1001 ----+----*----+----*----+----*----+----*----+----* 1050
L V - V K T M S
msj04376 717 GATTGGTCC........................CAGTAAAAACCATGTCT 742
| ||| || | || | || || |
hk06527 998 CAGTGGCCCTGAAAGTGCCTGCCAACCCAGCATCTGTCAGCACAGTGCCC 1047
V A L K V P A N P A S V S T V P
1051 ----+----*----+----*----+----*----+----*----+----* 1100
S K L P L S S K S T A A M T S T V
msj04376 743 TCCAAGTTGCCCCTCAGTTCAAAGTCCACTGCTGCGATGACGTCTACTGT 792
||||||||||| || |||||| || ||| ||| || | |||| ||
hk06527 1048 TCCAAGTTGCCAACTAGCTCAAAGCCCCCTGGTGCAGTGCCTTCTAATGC 1097
S K L P T S S K P P G A V P S N A
1101 ----+----*----+----*----+----*----+----*----+----* 1150
L T N T A P S K L P S N S V Y A G
msj04376 793 GCTCACCAATACAGCGCCATCAAAATTACCCAGCAACTCAGTGTATGCGG 842
|||||||||| |||| ||||| ||||| |||| ||||||| ||| |
hk06527 1098 GCTCACCAATCCAGCACCATCCAAATTGCCCATCAACTCAACCCGTGCTG 1147
L T N P A P S K L P I N S T R A G
1151 ----+----*----+----*----+----*----+----*----+----* 1200
T V P S R V P A S V - K A P
msj04376 843 GCACAGTGCCATCCAGAGTGCCTGCTAGTGTGG......CCAAAGCACCT 886
||| |||||||||| ||||||| |||| ||| |||| | ||
hk06527 1148 GCATGGTGCCATCCAAAGTGCCTACTAGCATGGTGCTCACCAAGGTGTCT 1197
M V P S K V P T S M V L T K V S
1201 ----+----*----+----*----+----*----+----*----+----* 1250
A N T I P P E R N S K Q E E T P
msj04376 887 GCCAACACAATACCACCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCC 936
|||| |||| | || |||| ||| ||||| | | ||||||||||
hk06527 1198 GCCAGCACAGTCCCCACTGACGGGAGCAGCAGAAATG...AGGAGACCCC 1244
A S T V P T D G S S R N E E T P
1251 ----+----*----+----*----+----*----+----*----+----* 1300
E G P A T K V T T G G N Q T G P N
msj04376 937 GGAGGGTCCAGCAACCAAAGTCACCACTGGAGGCAACCAGACTGGACCAA 986
| | |||| || || | | |||||||||||| | | | | |
hk06527 1245 AGCAGCTCCAACACCCGCCGGCGCCACTGGAGGCAGCTCAGCCTGGCTAG 1294
A A P T P A G A T G G S S A W L D
1301 ----+----*----+----*----+----*----+----*----+----* 1350
S S I R S L H S G P E M S K P G
msj04376 987 ATAGCAGTATCAGGAGCTTGCACTCTGGACCAGAGATGAGCAAGCCAGGT 1036
| ||||| || | | ||| | ||| |||| ||||| ||
hk06527 1295 ACAGCAGCTCTGAGAATAGGGGCCTTGGGTCGGAGCTGAGTAAGCCTGGC 1344
S S S E N R G L G S E L S K P G
1351 ----+----*----+----*----+----*----+----*----+----* 1400
V L V S Q L D E P F S A C S V D L
msj04376 1037 GTGCTGGTATCCCAGTTGGACGAGCCATTCTCAGCCTGCTCTGTGGACCT 1086
||||||| ||||||| | ||| || ||||| | ||||| | ||| ||
hk06527 1345 GTGCTGGCATCCCAGGTAGACAGCCCGTTCTCGGGCTGCTTCGAGGATCT 1394
V L A S Q V D S P F S G C F E D L
1401 ----+----*----+----*----+----*----+----*----+----* 1450
A I S P S S S L V S E P N H G P E
msj04376 1087 TGCCATTAGCCCTAGCAGCTCCTTGGTCTCAGAACCCAACCATGGTCCAG 1136
|||||| || | |||| |||||||| | | ||| |||||| ||||
hk06527 1395 TGCCATCAGTGCCAGCACCTCCTTGGGCATGGGGCCCTGCCATGGCCCAG 1444
A I S A S T S L G M G P C H G P E
1451 ----+----*----+----*----+----*----+----*----+----* 1500
E N E Y S - F R I Q V D E
msj04376 1137 AGGAGAATGAGTATTCGT.........CCTTTAGAATCCAGGTAGACGAA 1177
|||||||||||||| || ||||| | ||||| || | ||
hk06527 1445 AGGAGAATGAGTATAAGTCCGAGGGCACCTTTGGGATCCACGTGGCTGAG 1494
E N E Y K S E G T F G I H V A E
1501 ----+----*----+----*----+----*----+----*----+----* 1550
S P - A D L
msj04376 1178 AGCCCCAG.................................TGCTGATCT 1194
| |||||| ||| || |
hk06527 1495 AACCCCAGCATCCAGCTCCTGGAGGGCAACCCTGGGCCACCTGCGGACCC 1544
N P S I Q L L E G N P G P P A D P
1551 ----+----*----+----*----+----*----+----*----+----* 1600
L G S P E P L A T Q Q P Q E E E E
msj04376 1195 ATTAGGAAGCCCTGAGCCACTAGCCACCCAGCAGCCCCAAGAAGAGGAAG 1244
|| |||| ||||| |||| || | || ||| || ||| |
hk06527 1545 GGATGGCGGCCCCAGGCCACAAGCCGACCGGAAGTTCCAGGAGAGGGAGG 1594
D G G P R P Q A D R K F Q E R E V
1601 ----+----*----+----*----+----*----+----*----+----* 1650
H C A S S M P W A K W - G A T
msj04376 1245 AACATTGTGCCAGTTCAATGCCCTGGGCTAAGTGGCT...TGGGGCCACC 1291
| || ||| | || ||||| |||||| | |||
hk06527 1595 TGCCATGCCACAGGCCCTCACCTGGGGCTCTGTGGCTCCAGGTGGCTGTG 1644
P C H R P S P G A L W L Q V A V
1651 ----+----*----+----*----+----*----+----*----+----* 1700
S A L L A V F L A V M L Y R R R
msj04376 1292 AGTGCACTCTTGGCTGTATTCCTGGCAGTGATGCTGTACCGTAGTAGGCG 1341
| | | ||| || || ||| ||||||||| | ||||
hk06527 1645 ACAGGGGTGCTGGTAGTCACACTCCTGGTGGTGCTGTACC...GGCGGCG 1691
T G V L V V T L L V V L Y R R R
1701 ----+----*----+----*----+----*----+----*----+----* 1750
L A Q
msj04376 1342 CCTGGCCCAGTGAAGCC..........................TCAGCTG 1365
||| | ||||||||| || | |
hk06527 1692 TCTGCACTAGTGAAGCCCTGGGCTCTTCCCACCACCCATCTGTTCCGTTC 1741
L H *
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msj04376 1366 TATGCTGTTCTCTTGCTCAGTTCTGCCAAGCATGTTCTCTAGGCTTGGGC 1415
| || || | || | | | || || | |||
hk06527 1742 CTGCAGTATACCTGGCCCCTCTCCGAAGCCCCTTGTCCCTTTCTTGGGGA 1791
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msj04376 1416 TAGTAGAGGCTGAGTCAGAGAAACTTAAATATGGCGAGGTCCACTGAGCT 1465
| || ||||||| ||||||| | || | | || |||
hk06527 1792 TTGTGGAGGCTGGGTCAGAGGGGAGTTAAGGGACTGCAGGCCTGGCAGCA 1841
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msj04376 1466 ATCCAGGTAGATAGCTACACCAAGACGTCATCACTGTTGGGTGGGGGAGA 1515
|| | | ||| |||||| | | | |||
hk06527 1842 GGACATG.CCTTGGCTGAACCAAGTCCT................GAGAGC 1874
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msj04376 1516 GACATTGTTTTATCCTGGTTCATATGTCATCTTCTGGTCTTCAGCTTTTG 1565
||| | | || | | ||| || | |||
hk06527 1875 AGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCTTGGCTTTC 1924
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msj04376 1566 GAGGCACTGTGTTACCTCCATTGCTCCTGACCTGCCCACGTGGCAGTGTA 1615
|| ||| | | || ||| |||||| ||||| ||| ||||| | |
hk06527 1925 TGGGTCCTGGGCTGCCCCCAGTGCTCCAGACCTTCCCCACTGGCAATCCA 1974
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msj04376 1616 AGAGTTCATGCTCTGTGCTCCTAAGGAGGTATCTCCACCA.GCTTTATCC 1664
| |||| | ||| |||| ||||| | |||| ||| || | | ||
hk06527 1975 GGTTATCAT.CCATGTCCTCCAGAGGAGCTTCCTCCTCCAGGCCTCAGCC 2023
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msj04376 1665 CTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGC...........ACTG 1703
||||||||||| | || |||||| | | |
hk06527 2024 CTGTTGGCCCA....GGTGGAGCAGGAGGGACCACTGGAACATGTGGTGC 2069
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msj04376 1704 TTGACAATGCCCCTCATCTCGCCCAGATCTTCTGAAACACAAGCGTAGGT 1753
||| |||||| ||| | | || | || | | || | ||||
hk06527 2070 TTGGGAATGCCTCTCCTGTTGCATTGGTCCCTGAAGGCCTCAGGGCAGGT 2119
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msj04376 1754 ACACTGATGAGTGCTCCCATAGCATCTTATGCCTTCCA..CCGGCAGCCT 1801
| | | | || ||||| ||| | |||||||
hk06527 2120 ATGTGGTGTGTGGGCGACTCCACAAGACCTGCCTCCCATCCTGGCAGCCC 2169
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msj04376 1802 GGTCTAAGGCCTTGGCAGGAGAGCCTG..GGAGTAACAGAGTGGCTGGTC 1849
| || || || | ||| || | |||| ||| ||||||| ||
hk06527 2170 AGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTC 2219
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msj04376 1850 TCTAGG.......GAGCTTTGAGTGCTCTGCCCCTTTGGGCCCTCTCCAC 1892
|| ||| || |||||| | ||||||| ||||||| |||| |
hk06527 2220 TCCAGGAGCCCAACTGCCTTGAGTTC.CTGCCCCACTGGGCCCCCTCCCC 2268
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msj04376 1893 AGCCAGTCAACCCTGAGGGTGAGTCTGGAGGTTCTCTGTGGACTCTTAAG 1942
|| | ||| ||| ||| |||||||||||| |||||||| || | |
hk06527 2269 TGCTGGGCAATCCT..GGGAAGGTCTGGAGGTTC.CTGTGGAC.CTCAGG 2314
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msj04376 1943 AAAGCCAGAAGCAACTGCCAGGCCTGAGGAAGCCCCTGGGAGGGAGCTTT 1992
||||||| ||| ||| |||||||||||||| || ||||||
hk06527 2315 GAAGCCAGGGGCAGCTGTCAGGCCTGAGGAAGACC....TGTGGAGCTCC 2360
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msj04376 1993 TCTCCAACCTCCTTACCCCCTCCTCGCTTCTCCACTCCTGGTCTCCATTC 2042
|||||| |||||| |||||| | |||||||||||||
hk06527 2361 TCTCCAGCCTCCTCTTTCCCTCC...........CCTCTGGTCTCCATTC 2399
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msj04376 2043 T......CTCCCTATACTGGAT...GATGAGATACCTAGTGGGCAGAACT 2083
| ||||||| | || | || |||| |||| ||||||||| ||
hk06527 2400 TCTTCAGCTCCCTACATGGGCTGGGGAGGAGACACCTGGTGGGCAGAGCT 2449
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msj04376 2084 CAGGCTGGGCTT...GCATCAGTTCCACCCTTTCCCTGGC.......CTT 2123
||||| | | || |||| ||| | |||| ||| |||
hk06527 2450 CAGGCAGAGGTTTGGATTTCAGCTCCCTCACTTCCGGGGCTGTGTGGCTT 2499
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msj04376 2124 TAGCAGATGTCTAGCTTCTCTAGTCTTG.TTCCCAATGTAGATAGCGGGC 2172
| ||||||||| || ||| |||||| ||| | | || || || | |
hk06527 2500 TGGCAGATGTCAGACT..TCTGGTCTTGCTTCTCCACGTGGACAGTGAGT 2547
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msj04376 2173 AGCTCTTCC...TTTTACTGGGCTCCTCTGAGTTTGAAGGATACAGATAC 2219
| || | || |||||| || |||||| ||||| ||||| |
hk06527 2548 ATCTGGCTCATTCTTCACTGGGTTCTTCTGAGATTGAA.CCTACAGGTGT 2596
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msj04376 2220 TTGCCTAGTACTTATCTCAGAGGGTGTGAGTACAAGTTCTTGCCCTCCTG 2269
||||| ||| | | | ||||| ||| || |||| | ||
hk06527 2597 TTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCTTCTCCCATCTCTC 2646
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msj04376 2270 CCCTGGCTGGCTGAGCTAAGGTGAGAGTGTGAGAGGCAGAGTGCATATTG 2319
|||| | | | || |||| | |||||||||||||||| | ||
hk06527 2647 TCCTGCCCAACCTGGTAGAGCTGAGGGCATGAGAGGCAGAGTGCACAGTG 2696
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msj04376 2320 GTAATG...........GCAGTCTTTGAGAGAGCAGCCTTCATCTCCATC 2358
|| | | |||| | |||| | || | | |
hk06527 2697 GTCAAGGGTGCAGCTCTGCAGCACAGGCAGCCTAGGCCTGCGTCCCAACC 2746
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msj04376 2359 ATGCTTCTTTCTCCTCCCTGGTCAGGTGTA..GGCCTCACC..TCTGTGC 2404
|| | ||| || | | | | || | | | ||||| |
hk06527 2747 TGCCTCTCACCAGCTCTGTGACCTTGGGCAAGGGATTTATCTGTCTGTCC 2796
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msj04376 2405 CTCACTTTTCTTACCTGTGAGATG.GGGTGAGTATGTGTGTGTAT..... 2448
|| | |||||| |||||| | | | || | ||||| | | | |||
hk06527 2797 CTTAGTTTTCTCACCTGTAAAAGGAGGATAAGTATATATATATATTTCCC 2846
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msj04376 2449 .................................................. 2449
hk06527 2847 AGTGTTGTGAAGATTAAAGGAGTTTATCGATGTAGGTCTTAGGATGAGTC 2896
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msj04376 2449 .................................................. 2449
hk06527 2897 CTGGCATTTACCAAGGGTTGGATATATGTTATTATCACTATTGAGTGTTG 2946
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msj04376 2449 .................................................. 2449
hk06527 2947 AGGGTCCAGGCATGCTGGGCAACAGGGACCCCATCTCTACAAAAAAGTTT 2996
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msj04376 2449 .................................................. 2449
hk06527 2997 AAAAAATTAGCCAGGCGTGGTGGTGCACCTGTCGTCTTAGCTGCTTGGGA 3046
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msj04376 2449 .................................................. 2449
hk06527 3047 GGCTGAGGTGGGAGGATCGCTTGGGCCCGGAAGCTTGAGGCTGCAGTGAG 3096
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msj04376 2449 .................................................. 2449
hk06527 3097 CTAGGATCGTGCCACTGCACTCCAGCCTGGGTGAGGGAGCGAGACCCTGT 3146
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msj04376 2449 .................................................. 2449
hk06527 3147 CTCAAGAAAAAGAAAAATGCAGAGAAACAGGAGTCTTGGCTACTCCTTTA 3196
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msj04376 2449 ...ACACACACATACCCAC............................... 2464
|| || || |||| |
hk06527 3197 GAGGCAGACTCAGACCCTCCTGCCTCACAGCTTTATCTTTGTATTTGCCC 3246
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msj04376 2465 .................................................. 2465
hk06527 3247 CTTACTTTATCTTGTGCCTTGAGAAATTGCTGGGGAGAGAGGTATGTCCA 3296
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msj04376 2465 .................................................. 2465
hk06527 3297 CTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCCCAGCAG 3346
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msj04376 2465 .................................................. 2465
hk06527 3347 CCAGGTTCCCTCACCCCAAGCTCACCCACTGTTGGGGAGATTATCTACAA 3396
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msj04376 2465 .................................................. 2465
hk06527 3397 TAACACCAGAAACACATTGGGGTGGATTGGGGGTATCCTTATGGGTTCTT 3446
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msj04376 2465 .................................................. 2465
hk06527 3447 TTCAGGGAACCATTGCTGGACAAGGCACAGGAGCCACCTCCATTTCTGAG 3496
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msj04376 2465 ...............................................AGA 2467
|
hk06527 3497 CTCTGCAAGGGACAAGAACTAGAGCCATCAGGGGCTGGGCTCACTGTGGC 3546
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msj04376 2468 CCCACGCCCACACCCACACATACATGCTAATATATTCTCACCTGTGAGAT 2517
||||| || | | | | || | || | || | || | |
hk06527 3547 CCCACCCCAAGCCGTCAGCCTCCAGGGATCTACACCCTGCCTTGGCTGCT 3596
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msj04376 2518 GGAAAGTATGCATACATTGATGCTAATATATTCTAGTTTTATCAGGATAA 2567
| | | || | ||| | | || | | |||
hk06527 3597 ACAGCTTTTTCACTCCACTGCCCTAGGGGAGTTCAGCAACCTAATGATCT 3646
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msj04376 2568 TTAAAAGAGTTTATCTGTGC.............................. 2587
|| | |||| | |
hk06527 3647 CTATCTCTGAACATCTCTTCATCCCATGCTCCAAGTCCAGCAACCTGCAC 3696
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msj04376 2588 .................................................. 2588
hk06527 3697 CCTGGAACCAGGAGTGGACCCTACCCGAGCTGTCTGTATTAATCCCCATC 3746
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msj04376 2588 .................................................. 2588
hk06527 3747 CCCCACCACCAATCTTAAAAAGCCCTCTGTCCCCCTACCCTAAACCCCAG 3796
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msj04376 2588 .................................................. 2588
hk06527 3797 TTAGGTACCCATGCTGGGCAGGTCAGTTAACAATTTATGCACAGGTACTA 3846
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msj04376 2588 .................................................. 2588
hk06527 3847 GTTTTATTGTATTACCGTTCCAGGGTAGCTTTGAAAAAAGTATCTCAAAA 3896
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msj04376 2588 .................................................. 2588
hk06527 3897 AGGCAACATGGGCCGAGCGCAGTGGCTCGCGCCTGTGGTCCCAGCACTTT 3946
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msj04376 2588 .................................................. 2588
hk06527 3947 GGGAGGCCGAGGTGGGCAGATCGCCTGAGGTCTGGAGTTCAAGGCCGGCC 3996
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msj04376 2588 .................................................. 2588
hk06527 3997 TGGCCGACGGGGTGAAACCCCGTCTCTGCGAAAGTAAGAAAATTGGCCGG 4046
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msj04376 2588 .................................................. 2588
hk06527 4047 GTGTGGTGGCGGACGTCTGTGGTCCCAGCTATTCAGGAGACTGAGGCGCG 4096
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msj04376 2588 .................................................. 2588
hk06527 4097 AGAATTCCATGAACCCAGGGTGCGGAGGTTGCAGTGAGCCGAGATTGTGC 4146
4201 ----+----*----+----*----+----*----+----*- 4241
msj04376 2588 ......................................... 2588
hk06527 4147 CACTGCGCTCCAGCCTGGGCGACAGAGTGGTATTCTGTTTC 4187