Comparison of KIAA cDNA sequences between mouse and human (KIAA1487)
<<Original sequence data>>
mouse mKIAA1487 (msj04098) length: 2109 bp, CDS: 1 - 594
human KIAA1487 (fj07249) length: 3992 bp, CDS: 3 - 1955
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: - - - -
CDS: 1341 - 1946 479 117 19.6
3'UTR: 1947 - 3506 933 555 37.3
amino acid
CDS: 1341 - 1946 143 59 29.2
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msj04098 1 .................................................. 1
fj07249 1 GAAAAAGAATGTCTGTTGTGGTCCGACACCCTCTTTCCAATCAAGTTGTG 50
K R M S V V V R H P L S N Q V V
51 ----+----*----+----*----+----*----+----*----+----* 100
msj04098 1 .................................................. 1
fj07249 51 GTGTATACGAAAGGCGCTGATTCTGTGATCATGGAGTTACTGTCGGTGGC 100
V Y T K G A D S V I M E L L S V A
101 ----+----*----+----*----+----*----+----*----+----* 150
msj04098 1 .................................................. 1
fj07249 101 TTCCCCAGATGGAGCAAGTCTGGAGAAACAACAGATGATAGTAAGGGAGA 150
S P D G A S L E K Q Q M I V R E K
151 ----+----*----+----*----+----*----+----*----+----* 200
msj04098 1 .................................................. 1
fj07249 151 AAACCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGTACTTTA 200
T Q K H L D D Y A K Q G L R T L
201 ----+----*----+----*----+----*----+----*----+----* 250
msj04098 1 .................................................. 1
fj07249 201 TGTATAGCAAAGAAGGTCATGAGTGACACTGAATATGCAGAGTGGCTGAG 250
C I A K K V M S D T E Y A E W L R
251 ----+----*----+----*----+----*----+----*----+----* 300
msj04098 1 .................................................. 1
fj07249 251 GAATCATTTTTTAGCTGAAACCAGCATTGACAACAGGGAAGAATTACTAC 300
N H F L A E T S I D N R E E L L L
301 ----+----*----+----*----+----*----+----*----+----* 350
msj04098 1 .................................................. 1
fj07249 301 TTGAATCTGCCATGAGGTTGGAGAACAAACTTACATTACTTGGTGCTACT 350
E S A M R L E N K L T L L G A T
351 ----+----*----+----*----+----*----+----*----+----* 400
msj04098 1 .................................................. 1
fj07249 351 GGCATTGAAGACCGTCTGCAGGAGGGAGTCCCTGAATCTATAGAAGCTCT 400
G I E D R L Q E G V P E S I E A L
401 ----+----*----+----*----+----*----+----*----+----* 450
msj04098 1 .................................................. 1
fj07249 401 TCACAAAGCGGGCATCAAGATCTGGATGCTGACAGGGGACAAGCAGGAGA 450
H K A G I K I W M L T G D K Q E T
451 ----+----*----+----*----+----*----+----*----+----* 500
msj04098 1 .................................................. 1
fj07249 451 CAGCTGTCAACATAGCTTATGCATGCAAACTACTGGAGCCAGATGACAAG 500
A V N I A Y A C K L L E P D D K
501 ----+----*----+----*----+----*----+----*----+----* 550
msj04098 1 .................................................. 1
fj07249 501 CTTTTTATCCTCAATACCCAAAGTAAAGATGCCTGTGGGATGCTGATGAG 550
L F I L N T Q S K D A C G M L M S
551 ----+----*----+----*----+----*----+----*----+----* 600
msj04098 1 .................................................. 1
fj07249 551 CACAATTTTGAAAGAACTTCAGAAGAAAACTCAAGCCCTGCCAGAGCAAG 600
T I L K E L Q K K T Q A L P E Q V
601 ----+----*----+----*----+----*----+----*----+----* 650
msj04098 1 .................................................. 1
fj07249 601 TGTCATTAAGTGAAGATTTACTTCAGCCTCCTGTCCCCCGGGACTCAGGG 650
S L S E D L L Q P P V P R D S G
651 ----+----*----+----*----+----*----+----*----+----* 700
msj04098 1 .................................................. 1
fj07249 651 TTACGAGCTGGACTCATTATCACTGGGAAGACCCTGGAGTTTGCCCTGCA 700
L R A G L I I T G K T L E F A L Q
701 ----+----*----+----*----+----*----+----*----+----* 750
msj04098 1 .................................................. 1
fj07249 701 AGAAAGTCTGCAAAAGCAGTTCCTGGAACTGACATCTTGGTGTCAAGCTG 750
E S L Q K Q F L E L T S W C Q A V
751 ----+----*----+----*----+----*----+----*----+----* 800
msj04098 1 .................................................. 1
fj07249 751 TGGTCTGCTGCCGAGCCACACCGCTGCAGAAAAGTGAAGTGGTGAAATTG 800
V C C R A T P L Q K S E V V K L
801 ----+----*----+----*----+----*----+----*----+----* 850
msj04098 1 .................................................. 1
fj07249 801 GTCCGCAGCCATCTCCAGGTGATGACCCTTGCTATTGGTGATGGTGCCAA 850
V R S H L Q V M T L A I G D G A N
851 ----+----*----+----*----+----*----+----*----+----* 900
msj04098 1 .................................................. 1
fj07249 851 TGATGTTAGCATGATACAAGTGGCAGACATTGGGATAGGGGTCTCAGGTC 900
D V S M I Q V A D I G I G V S G Q
901 ----+----*----+----*----+----*----+----*----+----* 950
msj04098 1 .................................................. 1
fj07249 901 AAGAAGGCATGCAGGCTGTGATGGCCAGTGACTTTGCCGTTTCTCAGTTC 950
E G M Q A V M A S D F A V S Q F
951 ----+----*----+----*----+----*----+----*----+----* 1000
msj04098 1 .................................................. 1
fj07249 951 AAACATCTCAGCAAGCTCCTTCTTGTCCATGGACACTGGTGTTATACACG 1000
K H L S K L L L V H G H W C Y T R
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msj04098 1 .................................................. 1
fj07249 1001 GCTTTCCAACATGATTCTCTATTTTTTCTATAAGAATGTGGCCTATGTGA 1050
L S N M I L Y F F Y K N V A Y V N
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msj04098 1 .................................................. 1
fj07249 1051 ACCTCCTTTTCTGGTACCAGTTCTTTTGTGGATTTTCAGGAACATCCATG 1100
L L F W Y Q F F C G F S G T S M
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msj04098 1 .................................................. 1
fj07249 1101 ACTGATTACTGGGTTTTGATCTTCTTCAACCTCCTCTTCACATCTGCCCC 1150
T D Y W V L I F F N L L F T S A P
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msj04098 1 .................................................. 1
fj07249 1151 TCCTGTCATTTATGGTGTTTTGGAGAAAGATGTGTCTGCAGAGACCCTCA 1200
P V I Y G V L E K D V S A E T L M
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msj04098 1 .................................................. 1
fj07249 1201 TGCAACTGCCTGAACTTTACAGAAGTGGTCAGAAATCAGAGGCATACTTA 1250
Q L P E L Y R S G Q K S E A Y L
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msj04098 1 .................................................. 1
fj07249 1251 CCCCATACCTTCTGGATCACCTTATTGGATGCTTTTTATCAAAGCCTGGT 1300
P H T F W I T L L D A F Y Q S L V
1301 ----+----*----+----*----+----*----+----*----+----* 1350
I D I F
msj04098 1 ........................................ATTGACATCT 10
| ||||||||
fj07249 1301 CTGCTTCTTTGTGCCTTATTTTACCTACCAGGGCTCAGATACTGACATCT 1350
C F F V P Y F T Y Q G S D T D I F
1351 ----+----*----+----*----+----*----+----*----+----* 1400
T F G N P L N T A A L F I I L L
msj04098 11 TCACCTTTGGGAATCCCCTGAACACGGCGGCTCTGTTCATCATTCTCCTC 60
| | ||||| || ||||||||||| || |||||||||||| ||||||||
fj07249 1351 TTGCATTTGGAAACCCCCTGAACACAGCCGCTCTGTTCATCGTTCTCCTC 1400
A F G N P L N T A A L F I V L L
1401 ----+----*----+----*----+----*----+----*----+----* 1450
H L V I E S K S L T W I H M L V T
msj04098 61 CACCTGGTGATTGAAAGCAAGAGTTTGACTTGGATCCACATGCTGGTCAC 110
|| ||||| |||||||||||||||||||||||||| ||| |||||||||
fj07249 1401 CATCTGGTCATTGAAAGCAAGAGTTTGACTTGGATTCACTTGCTGGTCAT 1450
H L V I E S K S L T W I H L L V I
1451 ----+----*----+----*----+----*----+----*----+----* 1500
V G S I L S Y F F F A L A F G A L
msj04098 111 GGTTGGGAGCATCTTGTCCTACTTTTTCTTTGCCTTGGCTTTTGGAGCCT 160
|||| ||||||||||| || ||||| |||||| | | ||||||||||
fj07249 1451 CATTGGTAGCATCTTGTCTTATTTTTTATTTGCCATAGTTTTTGGAGCCA 1500
I G S I L S Y F L F A I V F G A M
1501 ----+----*----+----*----+----*----+----*----+----* 1550
C V T C N P P S N P Y G I M R K
msj04098 161 TATGTGTCACTTGCAACCCACCCTCCAACCCCTACGGGATCATGCGGAAG 210
| ||||| |||||||||||||| |||||||| ||| |||| |||| | ||
fj07249 1501 TGTGTGTAACTTGCAACCCACCATCCAACCCTTACTGGATTATGCAGGAG 1550
C V T C N P P S N P Y W I M Q E
1551 ----+----*----+----*----+----*----+----*----+----* 1600
H M L D P V F Y L V C V L T T F V
msj04098 211 CACATGCTGGACCCTGTGTTCTACTTGGTTTGTGTACTTACAACCTTCGT 260
||||||||||| || || |||||||| |||||| | || || || | | |
fj07249 1551 CACATGCTGGATCCAGTATTCTACTTAGTTTGTATCCTCACGACGTCCAT 1600
H M L D P V F Y L V C I L T T S I
1601 ----+----*----+----*----+----*----+----*----+----* 1650
A L L P R F L Y R V L Q G S V F P
msj04098 261 CGCGCTCCTGCCGAGGTTTCTTTACCGAGTTCTTCAGGGATCCGTGTTTC 310
|| || ||||| |||||| | ||| ||||||||||||||||| ||||||
fj07249 1601 TGCTCTTCTGCCCAGGTTTGTATACAGAGTTCTTCAGGGATCCCTGTTTC 1650
A L L P R F V Y R V L Q G S L F P
1651 ----+----*----+----*----+----*----+----*----+----* 1700
S P V L R A K Y F D R L P P E E
msj04098 311 CATCTCCAGTTCTCAGAGCCAAGTACTTTGACAGACTACCTCCAGAGGAG 360
|||||||| |||| ||||| ||| |||||||||||||| |||||||||||
fj07249 1651 CATCTCCAATTCTGAGAGCTAAGCACTTTGACAGACTAACTCCAGAGGAG 1700
S P I L R A K H F D R L T P E E
1701 ----+----*----+----*----+----*----+----*----+----* 1750
R A E A L K R W R G T A K V N H V
msj04098 361 AGAGCTGAAGCTCTCAAGAGGTGGAGAGGGACAGCAAAGGTCAATCACGT 410
|| || |||||||||||| |||||||||| | | |||| | ||||| ||
fj07249 1701 AGGACTAAAGCTCTCAAGAAGTGGAGAGGGGCTGGAAAGATGAATCAAGT 1750
R T K A L K K W R G A G K M N Q V
1751 ----+----*----+----*----+----*----+----*----+----* 1800
A S K H A S Q S A A M S - R P T
msj04098 411 GGCATCTAAGCATGCCAGCCAATCAGCTGCTATGTCAG...GAAGACCAA 457
| |||| ||| |||| | ||||||||||| | ||||| ||||||| |
fj07249 1751 GACATCAAAGTATGCTAACCAATCAGCTGGCAAGTCAGGAAGAAGACCCA 1800
T S K Y A N Q S A G K S G R R P M
1801 ----+----*----+----*----+----*----+----*----+----* 1850
P G S S A V L A M K S A T V S T
msj04098 458 CACCTGGGTCTTCTGCTGTCCTTGCAATGAAGTCAGCAACAGTGTCTACT 507
||||| |||||||||| ||||||||||||||||||| | | ||
fj07249 1801 TGCCTGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAACTTCCTGTGCT 1850
P G P S A V F A M K S A T S C A
1851 ----+----*----+----*----+----*----+----*----+----* 1900
V E Q S - R E T A L D R G C
msj04098 508 GTTGAGCAGAGCA.........CACGTGAGACTGCGCTAGACCGTGGCTG 548
||||||| | | |||| ||||| |||| | ||||
fj07249 1851 ATTGAGCAAGGAAACTTATCTCTGTGTGAAACTGCTTTAGATCAAGGCTA 1900
I E Q G N L S L C E T A L D Q G Y
1901 ----+----*----+----*----+----*----+----*----+----* 1950
S E P G A S K M T G S S A S * T C
msj04098 549 CTCTGAACCTGGGGCCTCCAAGATGACTGGATCCTCAGCAAGCTAAACAT 598
||||||| || ||||| ||||| ||||| |||| | | || |
fj07249 1901 CTCTGAAACTAAGGCCTTTGAGATGGCTGGACCCTCCAAAGGTAAAGAAA 1950
S E T K A F E M A G P S K G K E S
1951 ----+----*----+----*----+----*----+----*----+----* 2000
R
msj04098 599 GCAGGACACCCTGCTTAGAGTTGCTGGCAATCCTTCAAGTTTGGAA...G 645
|| || ||||| ||| ||||||| | | || |||||| |||||| |
fj07249 1951 GCTAGATACCCTCCTTGGAGTTGCAAGTATTCTTTCAAGGTTGGAAGAGG 2000
*
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msj04098 646 GATGTAGAAGAGCACCTCTCAGAAGTTAGGATTACTTGTGGCTTTGTACA 695
||| | |||||| ||| || || |||||| ||| | |
fj07249 2001 GATTTTGAAGAGGTATCTCTCCAAGCAAGAATGACTTGT..TTTTCCATA 2048
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msj04098 696 AGGGATGTCAGCATTTTGCTTGGCATGGAAAAACCAAGAACCTCTCTATC 745
||||| | |||||||| || ||| ||||| | | | | | ||
fj07249 2049 AGGGACATGAGCATTTTACTAGGCTTGGAAGAGCTGACATGATGAGCATT 2098
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msj04098 746 ATTGTATACCTGTGAGCACATTTGTAAACAAAGGATAGTGTTTGACCAGA 795
||||||| ||| |||||||| | | || ||| ||||||||
fj07249 2099 ATTGTATGTTTGTATATACATTTGTGATAGAGGGCTAGAGTTTGACCTAG 2148
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msj04098 796 GCAGAGTTT.AGGAACTGGAATATTTAATTCAGGAGAATGTGTTGTTTTT 844
||||||| ||||| || |||||||||||||| | | || | ||| |
fj07249 2149 AGAGAGTTTAAGGAAGTGAAATATTTAATTCAGAACCAAATGCT.TTTGT 2197
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msj04098 845 TTGAAACTTTGATTTTTGTAAAGGAATTTTAATTGTCTTCTCGATGCAAA 894
| |||| ||||||||| | ||||| ||| |||| || |||
fj07249 2198 AAAACTTTTTGGATTTTGTAAAAGCATTTTCATTCTCTTAGAAATTCAAG 2247
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msj04098 895 CATTATCAAAGAAGCTTATTTGAAATATATTTATTTTACAGATTAGCCTC 944
||| |||| | | |||||| ||||||||||||||| | |
fj07249 2248 TATTTTCAAGGGGAGTCATTTGAGATATATTTATTTTAC...TAGGAGAT 2294
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msj04098 945 ACCATGCATTTGAAAAATGCTTTAGGTATTTAAGTATTCTCCATGGGTCC 994
|| | | |||||||||| | |
fj07249 2295 CTTATATTCTAGGGAAATGCTTTAAATGGT.................... 2324
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msj04098 995 CCTGATGCAATGGGAGTGAACATAATTCTATGATGTTCTTTGTAACCTAG 1044
| | | |||| ||| | ||| | | | ||| || | |
fj07249 2325 CAGGCTCCAATCGGAATTTTTTTAAGAAAAAAGTAGTTTTTAATACATTG 2374
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msj04098 1045 GTTTCTTTACCGAGTTCTTCAGG...GATCCGTGAATTCTCCTTATGAAA 1091
||| | ||| | || | | || | | || |
fj07249 2375 GTTAGGACTCAGAGGAAATACGGAAAAAACATTGTAGATGGTTAATTTAC 2424
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msj04098 1092 ATCCAACCTGAATTCTCCTTATGAAAAAAAAAAGTACTTTAAAAAATTGT 1141
| || | | | | ||| || || |||| | ||| |
fj07249 2425 AGATAAAATCCCAAGAGCCTTTTAAACAACAAGGTACCTAAAATAGGGTA 2474
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msj04098 1142 TCATTAGGAAAACATTAATTTTTGAGGACAAATTCCCAAGAGCCTTTTAT 1191
| |||| | |||| | | | || ||| ||||||
fj07249 2475 TAATTA..TACTGCTTAAAATACAGTTAGTGCCTATTAATAGCTTTTTAT 2522
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msj04098 1192 TTCCCAT.GAGAGAAGGTTTTGGT.TCCCGACTGAAGGTGTTTGACGTCA 1239
|||| || | |||| | ||||||| | | | |||||| || | | | |
fj07249 2523 TTCCTATGGGGAGATGCTTTTGGTCTTCTGGCTGAAGATG.TAGGCATAC 2571
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msj04098 1240 CTCTCTGTCATTTCAGCTTTCTGCTGAAGT..AGCCTTTGTAGGGAAGGG 1287
||||| |||||||| || | |||| || |||||| | || |||||
fj07249 2572 CTCTCACTCATTTCAATGTTTTCCTGAGGTGGAGCCTTCATTGGAAAGGG 2621
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msj04098 1288 CAAAGAAGAAGGCTAGTGTTTTCAACAATCCCAGGCTGCCTTCTGCTCTG 1337
||||| | | |||| |||| ||||| | | | |||||
fj07249 2622 GAAAGAGGGATTCTAGGGTTTCATCAGGGACCAGGAATGCAT.TCCTCTG 2670
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msj04098 1338 TTTACTTTGTTTACTGTTTACCCTGTTACTGAGTAGACGCAGAGACTCCC 1387
| || | | | | || |||| || ||
fj07249 2671 TCAGGTTCCAATCAAGAGAAGACCTTTTATGAG..........ATCTGCC 2710
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msj04098 1388 TATGTGCCGATGTTGTCAACCAGGAAACGGA..CAAATGGCCATGAAACA 1435
| ||| |||||||||| ||||||| || | | || || | |
fj07249 2711 TCTGTATAGATGTTGTCAGTTAGGAAACTGAAGCCATAGGTCAGGCA..G 2758
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msj04098 1436 CAATCACCTGAGCCTACAGGCCGTGTGTGAGCAGCTCCTGGGTTCTAAAA 1485
||| || ||||| | || | | | ||||| || |||||
fj07249 2759 ACGTCAGCTCAGCCTGTGGCCC..ATTGGGTGATTTCCTGTATTTTAAAA 2806
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msj04098 1486 TTGATGACACTCATGTTAAAAATGAGACAATCATTTTGAA...AGTCTTC 1532
||| | | || | ||| ||| ||||||| ||| || | |||||
fj07249 2807 CTGA.CAGTAGCCTGATCAAAGTGATACAATCAATTTCAAAACAATCTTC 2855
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msj04098 1533 CAGAGTCCGCTTGAGAGTTCATAGTTGTAACAGTGCTC.AAGAGTTTGTC 1581
||||| || ||||| |||||||||| | ||| | | | ||| |||
fj07249 2856 CAGAGACCACTTGAAGGTTCATAGTTTTTACAATACCCTGAGACTTTTCA 2905
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msj04098 1582 TGTGTTGTGCCCTCCACAGAATGAGATATGGGTTGAAATTGATACAGGTT 1631
|||||| |||| | | ||||||||| |||| | ||||| |||
fj07249 2906 GGTGTTGGAGCCTCTAAAATATGAGATATAAACAGAAACTAATACAAGTT 2955
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msj04098 1632 ATTCTCAGTGGGAATCTCCGAGGCTCTTAGAAAAA........TCAACAT 1673
||||| | || ||| |||| ||||||||||| | ||
fj07249 2956 GTTCTCTGGAGGTTTCTATGAGGTTCTTAGAAAAATTTGGTTTTAAAATC 3005
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msj04098 1674 ATTGAAGGGTAGAGATGTCTGTAGCAAGGTTTCTGCTGTGACAAATCACG 1723
||| ||| || |||||| ||||||| || || || | | ||||| |
fj07249 3006 ATTTGAGGACAGGAATGTCTATAGCAAGTTTACTCCTATTGCGAATCATG 3055
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msj04098 1724 GATGGATGCTGTCTCCATTTAGTGCCTAGAAATTAACTTACACTAGTCAA 1773
||| || |||||| | ||| | ||| ||| ||
fj07249 3056 TATG........CTGGCTTTAGTTGTAACAAACGATTTTATTCTAAGTAA 3097
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msj04098 1774 GTCAATTTGCTACTGTGAAATCATGCACTCTTGTTGAAGTCTTTCAAAGC 1823
| | | ||||||| | ||||||| | || ||||||||| || |
fj07249 3098 GGCCAGGTGCTACTATAAAATCATATATTCCTGTTGAAGTTCTTTTGAAG 3147
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msj04098 1824 TTCCATATC.........CACCTGACAGCTGCCACCTCCCTGTCATCTAG 1864
| | || || | ||| || || || | || |||||| ||
fj07249 3148 TCCTATCTCTATTTATTATATTTGAAAGTTGTCAGCCACCAGTCATCCAG 3197
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msj04098 1865 AATTCTCTTCATGAACCTCTATGCTAAAGATCAGTGTCTACATCAAAGTC 1914
|||| |||| |||| ||| ||||| | || |||||||||||| |||
fj07249 3198 AATTTCCTTCCTGAATCTCCATGCTCATATGCAATGTCTACATCAAGGTC 3247
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msj04098 1915 TTATAA...ACTGTTACTCTCAGG.....GCCTGTTACCCGCTGGGTACC 1956
|| | | ||| ||| ||||||| | | |||| ||| |||
fj07249 3248 TTCTTAATGACTATTATTCTCAGGGTTTAGTTTTCTACCTTCTGCCTACT 3297
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msj04098 1957 ATCCCAGTC...ACTTTCTGTACCTTCCTGGTATCGTTGTTAAATGGTCT 2003
|| ||| ||| |||| | | ||| ||| ||| |||| ||||
fj07249 3298 ATTTTGGTCTGACATTTTTGTAGCCTTCTGTTATTATTG.GAAATAGTCT 3346
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msj04098 2004 TTTCACATAGACTGATTTCTGGAACTGTCACAAAACCATGTGTCTAAACG 2053
|| ||||| |||||||| ||||| ||| || || | |||| |
fj07249 3347 CTT.ACATAAGCTGATTTCGAGAACTTTCAAAATCTCACATAGCTAATGG 3395
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msj04098 2054 AAGCTGCCTTCTGCTTCCTTGAGATTTTTTTTTTTAAATAAATTATTTAA 2103
||| ||| |||||||| ||| || | ||||| |||||||| | ||| |
fj07249 3396 AAGTTGCTTTCTGCTTTCTTATGA.CTGTTTTTATAAATAAACTGTTTCA 3444
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msj04098 2104 TAAATG............................................ 2109
|||||
fj07249 3445 TAAATAATGTATACTGGAAAATTGTCATCACTCTTGTAAACATTTGCCAA 3494
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msj04098 2110 .................................................. 2110
fj07249 3495 ATCCAACTGTAATTAGTACCAGAACTTAGAAGGAAAGTCACAAAGCATGC 3544
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msj04098 2110 .................................................. 2110
fj07249 3545 CTTTTACCAGAATATTGCTTTGCCTTTTCTTATATGGAAAATCACTGATG 3594
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msj04098 2110 .................................................. 2110
fj07249 3595 TCATATCATTTATTATCCTCACAGCAGCTGGCATTCATTCCCTGAAATCG 3644
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msj04098 2110 .................................................. 2110
fj07249 3645 TCGTCTCCTGATAAACAATAATTTAGAGATATGTTCACTTGTAAATAAAA 3694
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msj04098 2110 .................................................. 2110
fj07249 3695 AGGTTAGAATCTAAGGACAAAGAATGATCCAAAAATACTAAGGAAAAAGA 3744
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msj04098 2110 .................................................. 2110
fj07249 3745 ACAATTTTCAATTTTCAGAAATGAATTATCTGTACATATGAATAGAGGAA 3794
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msj04098 2110 .................................................. 2110
fj07249 3795 AATACTGAGTGCTAATGTTACAGGGCCACAATCTCATATCCACAATTCCA 3844
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msj04098 2110 .................................................. 2110
fj07249 3845 AAATCTCCAAACCTCTGAAAACTGAAATATTTTTCATAAATTAGGCGTAA 3894
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msj04098 2110 .................................................. 2110
fj07249 3895 ATTCTATGCCCTGAACAAATGTAAAGCTATTTATGTACTTTGCTTAATGT 3944
4001 ----+----*----+----*----+----*----+----*----+--- 4048
msj04098 2110 ................................................ 2110
fj07249 3945 AATCATTCATATACTTTGCTACAAAAATATTAATATATTTCATTACTG 3992