Comparison of KIAA cDNA sequences between mouse and human (KIAA0012)

<<Original sequence data>>

mouse  mKIAA0012 (msj04008)     length:   2346 bp, CDS:     1 -  2184
human   KIAA0012  (ha00413)     length:   2621 bp, CDS:    55 -  2424

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:        -           -        -          -
  CDS:    259 -  2425    1695      472      21.8
3'UTR:   2426 -  2609     109       72      39.8

amino acid

  CDS:    259 -  2425     549      173      24.0
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
msj04008     1 .................................................. 1
                                                                 
ha00413      1 TGTATCTGTATCAAGATGATCTGAAGAACAGCTTCTACCTTTAGGAATGT 50

            51 ----+----*----+----*----+----*----+----*----+----* 100
msj04008     1 .................................................. 1
                                                                 
ha00413     51 CTAGTGTTCCAAAATGACTAGCATCTTCCATTTTGCCATTATCTTCATGT 100
                   C  S  K  M  T  S  I  F  H  F  A  I  I  F  M  L

           101 ----+----*----+----*----+----*----+----*----+----* 150
msj04008     1 .................................................. 1
                                                                 
ha00413    101 TAATACTTCAGATCAGAATACAATTATCTGAAGAAAGTGAATTTTTAGTT 150
                 I  L  Q  I  R  I  Q  L  S  E  E  S  E  F  L  V  

           151 ----+----*----+----*----+----*----+----*----+----* 200
msj04008     1 .................................................. 1
                                                                 
ha00413    151 GATAGGTCAAAAAACGGTCTCATCCACGTTCCTAAAGACCTATCCCAGAA 200
               D  R  S  K  N  G  L  I  H  V  P  K  D  L  S  Q  K 

           201 ----+----*----+----*----+----*----+----*----+----* 250
msj04008     1 .................................................. 1
                                                                 
ha00413    201 AACAACAATCTTAAATATATCGCAAAATTATATATCTGAGCTTTGGACTT 250
                T  T  I  L  N  I  S  Q  N  Y  I  S  E  L  W  T  S

           251 ----+----*----+----*----+----*----+----*----+----* 300
                       L  S  L  S  K  L  R  V  L  I  M  S  Y  N  
msj04008     1 ........CTCTCATTGTCCAAGCTGAGGGTCCTGATAATGTCCTACAAC 42
                        | ||| |||| || |||||| |  ||||||| ||  | || 
ha00413    251 CTGACATCTTATCACTGTCAAAACTGAGGATTTTGATAATTTCTCATAAT 300
                 D  I  L  S  L  S  K  L  R  I  L  I  I  S  H  N  

           301 ----+----*----+----*----+----*----+----*----+----* 350
               R  L  Q  Y  L  N  I  S  V  F  K  F  N  T  E  L  E 
msj04008    43 AGACTCCAGTATCTTAATATCAGTGTTTTCAAATTCAACACAGAGCTGGA 92
               | | ||||||||||| |||||||||||||||||||||||   ||  ||||
ha00413    301 ACAATCCAGTATCTTGATATCAGTGTTTTCAAATTCAACCAGGAATTGGA 350
               T  I  Q  Y  L  D  I  S  V  F  K  F  N  Q  E  L  E 

           351 ----+----*----+----*----+----*----+----*----+----* 400
                Y  L  D  L  S  H  N  E  L  K  V  I  L  C  H  P  T
msj04008    93 ATATTTGGATTTGTCCCACAATGAGCTAAAGGTGATCTTGTGCCACCCAA 142
               ||| |||||||||||||||||  || |   |  ||| |  |||||||| |
ha00413    351 ATACTTGGATTTGTCCCACAACAAGTTGGTGAAGATTTCTTGCCACCCTA 400
                Y  L  D  L  S  H  N  K  L  V  K  I  S  C  H  P  T

           401 ----+----*----+----*----+----*----+----*----+----* 450
                 V  S  L  K  H  L  D  L  S  F  N  A  F  D  A  L  
msj04008   143 CAGTCAGCCTCAAGCATTTGGACCTCTCCTTTAATGCCTTTGATGCCCTG 192
               | || | ||||||||| |||||||| || |||||||| ||||||||||||
ha00413    401 CTGTGAACCTCAAGCACTTGGACCTGTCATTTAATGCATTTGATGCCCTG 450
                 V  N  L  K  H  L  D  L  S  F  N  A  F  D  A  L  

           451 ----+----*----+----*----+----*----+----*----+----* 500
               P  I  C  K  E  F  G  N  M  S  Q  L  Q  F  L  G  L 
msj04008   193 CCTATATGCAAAGAATTTGGCAACATGTCCCAACTACAGTTCCTGGGGTT 242
               |||||||||||||| |||||||| ||||| |||||| | || ||||||||
ha00413    451 CCTATATGCAAAGAGTTTGGCAATATGTCTCAACTAAAATTTCTGGGGTT 500
               P  I  C  K  E  F  G  N  M  S  Q  L  K  F  L  G  L 

           501 ----+----*----+----*----+----*----+----*----+----* 550
                S  G  S  R  V  Q  S  S  S  V  Q  L  I  A  H  L  N
msj04008   243 GAGCGGTTCTCGGGTACAAAGTTCAAGTGTGCAGCTGATTGCTCATTTGA 292
               ||||    | |   || |||  || ||||||| ||  |||||||||||||
ha00413    501 GAGCACCACACACTTAGAAAAATCTAGTGTGCTGCCAATTGCTCATTTGA 550
                S  T  T  H  L  E  K  S  S  V  L  P  I  A  H  L  N

           551 ----+----*----+----*----+----*----+----*----+----* 600
                 I  S  K  V  L  L  V  L  G  D  A  Y  G  E  K  E  
msj04008   293 ACATCAGTAAGGTTTTGCTGGTGTTAGGAGATGCTTATGGGGAAAAAGAA 342
               | ||||| ||||| |||||||| ||||||||  |||||||||||||||||
ha00413    551 ATATCAGCAAGGTCTTGCTGGTCTTAGGAGAGACTTATGGGGAAAAAGAA 600
                 I  S  K  V  L  L  V  L  G  E  T  Y  G  E  K  E  

           601 ----+----*----+----*----+----*----+----*----+----* 650
               D  P  E  S  L  R  H  V  S  T  E  T  L  H  I  V  F 
msj04008   343 GACCCCGAATCTCTTCGGCACGTTAGCACTGAGACTCTGCATATTGTTTT 392
               ||||| ||    ||||   || ||| |||||||| |||||| ||||| ||
ha00413    601 GACCCTGAGGGCCTTCAAGACTTTAACACTGAGAGTCTGCACATTGTGTT 650
               D  P  E  G  L  Q  D  F  N  T  E  S  L  H  I  V  F 

           651 ----+----*----+----*----+----*----+----*----+----* 700
                P  S  K  R  E  F  R  F  L  L  D  V  S  V  S  T  T
msj04008   393 CCCGTCGAAAAGAGAATTCCGTTTTCTTCTGGATGTGTCCGTCAGCACTA 442
               |||  | || | |||||||| |||| || |||||||||| ||||  ||| 
ha00413    651 CCCCACAAACAAAGAATTCCATTTTATTTTGGATGTGTCAGTCAAGACTG 700
                P  T  N  K  E  F  H  F  I  L  D  V  S  V  K  T  V

           701 ----+----*----+----*----+----*----+----*----+----* 750
                 I  G  L  E  L  S  N  I  K  C  V  L  E  D  Q  G  
msj04008   443 CGATCGGTTTGGAACTGTCTAACATCAAGTGTGTGCTTGAAGACCAGGGC 492
                      | ||||||| ||||| ||||| |||||||| |||||  |    
ha00413    701 TAGCAAATCTGGAACTATCTAATATCAAATGTGTGCTAGAAGATAACAAA 750
                 A  N  L  E  L  S  N  I  K  C  V  L  E  D  N  K  

           751 ----+----*----+----*----+----*----+----*----+----* 800
               C  S  Y  F  L  R  A  L  S  K  L  G  K  N  L  K  L 
msj04008   493 TGCTCTTATTTCTTACGTGCTTTGTCAAAGCTTGGAAAGAATCTGAAGCT 542
               || ||||| ||| || ||  | || | || |||  ||  ||||  ||| |
ha00413    751 TGTTCTTACTTCCTAAGTATTCTGGCGAAACTTCAAACAAATCCAAAGTT 800
               C  S  Y  F  L  S  I  L  A  K  L  Q  T  N  P  K  L 

           801 ----+----*----+----*----+----*----+----*----+----* 850
                S  N  L  T  L  N  N  V  E  T  T  W  N  S  F  I  N
msj04008   543 CTCAAATCTTACCCTGAACAATGTGGAAACAACGTGGAATTCCTTCATTA 592
                |||||||||||| | |||||  | |||||||| |||||||| |||||||
ha00413    801 ATCAAATCTTACCTTAAACAACATTGAAACAACTTGGAATTCTTTCATTA 850
                S  N  L  T  L  N  N  I  E  T  T  W  N  S  F  I  R

           851 ----+----*----+----*----+----*----+----*----+----* 900
                 I  L  Q  I  V  W  H  T  P  V  K  Y  F  S  I  S  
msj04008   593 ATATCCTCCAGATAGTTTGGCATACGCCAGTCAAATATTTCTCAATTTCA 642
                 ||||||||| | |||||||||||  | ||    |||||||||||||||
ha00413    851 GGATCCTCCAGCTGGTTTGGCATACAACTGTATGGTATTTCTCAATTTCA 900
                 I  L  Q  L  V  W  H  T  T  V  W  Y  F  S  I  S  

           901 ----+----*----+----*----+----*----+----*----+----* 950
               N  V  K  L  Q  G  Q  L  A  F  R  M  F  N  Y  S  D 
msj04008   643 AATGTGAAGCTACAAGGTCAACTTGCCTTCAGGATGTTCAATTATTCTGA 692
               || ||||||||||| ||||| || | ||||||    ||  ||||||||| 
ha00413    901 AACGTGAAGCTACAGGGTCAGCTGGACTTCAGAGATTTTGATTATTCTGG 950
               N  V  K  L  Q  G  Q  L  D  F  R  D  F  D  Y  S  G 

           951 ----+----*----+----*----+----*----+----*----+----* 1000
                T  S  L  K  A  L  S  I  H  Q  V  V  T  D  V  F  S
msj04008   693 CACTTCTCTGAAGGCTTTGTCGATACATCAAGTTGTCACTGATGTCTTCA 742
               ||||||  ||||||| ||||| ||||| ||||||||||  ||||| ||| 
ha00413    951 CACTTCCTTGAAGGCCTTGTCTATACACCAAGTTGTCAGCGATGTGTTCG 1000
                T  S  L  K  A  L  S  I  H  Q  V  V  S  D  V  F  G

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
                 F  P  Q  S  Y  I  Y  S  I  F  A  N  M  N  I  Q  
msj04008   743 GCTTCCCCCAAAGTTACATATACAGTATCTTTGCCAATATGAACATCCAA 792
               | || || |||||||| || ||    |||||| | |||||||||||| ||
ha00413   1001 GTTTTCCGCAAAGTTATATCTATGAAATCTTTTCGAATATGAACATCAAA 1050
                 F  P  Q  S  Y  I  Y  E  I  F  S  N  M  N  I  K  

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
               N  F  T  M  S  G  T  H  M  V  H  M  L  C  P  S  Q 
msj04008   793 AACTTTACAATGTCTGGAACACACATGGTCCACATGCTGTGCCCGTCCCA 842
               || || ||| ||||||| |||| ||||||||||||||| ||||| ||| |
ha00413   1051 AATTTCACAGTGTCTGGTACACGCATGGTCCACATGCTTTGCCCATCCAA 1100
               N  F  T  V  S  G  T  R  M  V  H  M  L  C  P  S  K 

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
                V  S  P  F  L  H  V  D  F  T  D  N  L  L  T  D  M
msj04008   843 AGTTAGCCCATTTCTGCATGTGGACTTTACAGATAACCTTTTAACAGACA 892
               | ||||||| || |||||| |||| ||| |  |||| || ||||||||||
ha00413   1101 AATTAGCCCGTTCCTGCATTTGGATTTTTCCAATAATCTCTTAACAGACA 1150
                I  S  P  F  L  H  L  D  F  S  N  N  L  L  T  D  T

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
                 V  F  K  D  C  R  N  L  V  R  L  K  T  L  S  L  
msj04008   893 TGGTTTTTAAAGACTGTAGAAACTTAGTTAGATTGAAAACACTTAGTTTA 942
                ||||||| || | ||| |  || |   |   ||| | ||||||| ||||
ha00413   1151 CGGTTTTTGAAAATTGTGGGCACCTTACTGAGTTGGAGACACTTATTTTA 1200
                 V  F  E  N  C  G  H  L  T  E  L  E  T  L  I  L  

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
               Q  K  N  Q  L  K  N  L  E  N  I  I  L  T  S  A  K 
msj04008   943 CAAAAGAATCAGTTAAAAAACCTTGAGAATATAATCCTCACATCTGCAAA 992
               |||| |||||| |||||| | |||   || |||      |   || || |
ha00413   1201 CAAATGAATCAATTAAAAGAACTTTCAAAAATAGCTGAAATGACTACACA 1250
               Q  M  N  Q  L  K  E  L  S  K  I  A  E  M  T  T  Q 

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
                M  T  S  L  Q  K  L  D  I  S  Q  N  S  L  R  Y  S
msj04008   993 GATGACATCCCTACAAAAACTAGACATTAGCCAGAATTCTCTAAGGTACA 1042
               |||||  || || ||| || | || ||||||||||||||| |||| ||  
ha00413   1251 GATGAAGTCTCTGCAACAATTGGATATTAGCCAGAATTCTGTAAGCTATG 1300
                M  K  S  L  Q  Q  L  D  I  S  Q  N  S  V  S  Y  D

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
                 D  G  G  I  P  C  A  W  T  Q  S  L  L  V  L  N  
msj04008  1043 GCGATGGGGGAATCCCATGCGCCTGGACCCAGAGTTTGTTAGTTTTAAAT 1092
                 ||   |  |      ||  | |||||  | ||||| |||  |||||||
ha00413   1301 ATGAAAAGAAAGGAGACTGTTCTTGGACTAAAAGTTTATTAAGTTTAAAT 1350
                 E  K  K  G  D  C  S  W  T  K  S  L  L  S  L  N  

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
               L  S  S  N  M  L  T  G  S  V  F  R  C  L  P  P  K 
msj04008  1093 TTGTCTTCGAATATGCTTACAGGCTCTGTCTTCAGATGCTTACCTCCCAA 1142
                ||||||| ||||| ||||| | | || | |||||||| |||||||||| 
ha00413   1351 ATGTCTTCAAATATACTTACTGACACTATTTTCAGATGTTTACCTCCCAG 1400
               M  S  S  N  I  L  T  D  T  I  F  R  C  L  P  P  R 

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
                V  K  V  L  D  L  H  N  N  R  I  M  S  I  P  K  D
msj04008  1143 AGTCAAGGTCCTTGACCTTCACAACAACAGGATAATGAGCATCCCTAAAG 1192
                 ||||||| ||||| ||||||| ||| |  |||| |||||| |||||| 
ha00413   1401 GATCAAGGTACTTGATCTTCACAGCAATAAAATAAAGAGCATTCCTAAAC 1450
                I  K  V  L  D  L  H  S  N  K  I  K  S  I  P  K  Q

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
                 V  T  H  L  Q  A  L  Q  E  L  N  V  A  S  N  S  
msj04008  1193 ATGTCACCCACCTGCAGGCTTTGCAGGAACTCAATGTAGCATCCAACTCC 1242
               | |||    | ||| | |||||||| ||||||||||| || | ||| || 
ha00413   1451 AAGTCGTAAAACTGGAAGCTTTGCAAGAACTCAATGTTGCTTTCAATTCT 1500
                 V  V  K  L  E  A  L  Q  E  L  N  V  A  F  N  S  

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
               L  T  D  L  P  G  C  G  A  F  S  S  L  S  V  L  V 
msj04008  1243 TTAACTGACCTTCCTGGGTGCGGGGCCTTCAGCAGCCTTTCTGTGCTGGT 1292
               ||||||||||||||||| || ||   ||| ||||||||||||||  || |
ha00413   1501 TTAACTGACCTTCCTGGATGTGGCAGCTTTAGCAGCCTTTCTGTATTGAT 1550
               L  T  D  L  P  G  C  G  S  F  S  S  L  S  V  L  I 

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
                I  D  H  N  S  V  S  H  P  S  E  D  F  F  Q  S  C
msj04008  1293 CATCGACCATAACTCAGTTTCCCATCCCTCTGAGGATTTCTTCCAGAGCT 1342
               ||| || || || ||||||||||| || || |  ||||||||||||||||
ha00413   1551 CATTGATCACAATTCAGTTTCCCACCCATCGGCTGATTTCTTCCAGAGCT 1600
                I  D  H  N  S  V  S  H  P  S  A  D  F  F  Q  S  C

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
                 Q  N  I  R  S  L  T  A  G  N  N  P  F  Q  C  T  
msj04008  1343 GTCAGAATATTAGATCCCTAACAGCGGGAAACAACCCATTCCAATGCACA 1392
               | ||||| || || ||  ||| ||| ||  |||| ||||||||||| || 
ha00413   1601 GCCAGAAGATGAGGTCAATAAAAGCAGGGGACAATCCATTCCAATGTACC 1650
                 Q  K  M  R  S  I  K  A  G  D  N  P  F  Q  C  T  

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
               C  E  L  R  D  F  V  K  N  I  G  W  V  A  R  E  V 
msj04008  1393 TGTGAGCTGAGGGACTTTGTCAAGAACATAGGCTGGGTAGCAAGAGAAGT 1442
               ||||||||  | || |||||||| || |||| |   ||| |||| |||||
ha00413   1651 TGTGAGCTAGGAGAATTTGTCAAAAATATAGACCAAGTATCAAGTGAAGT 1700
               C  E  L  G  E  F  V  K  N  I  D  Q  V  S  S  E  V 

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
                V  E  G  W  P  D  S  Y  R  C  D  Y  P  E  S  S  R
msj04008  1443 GGTGGAGGGCTGGCCTGACTCTTACAGGTGTGACTACCCAGAAAGCTCTA 1492
               | | |||||||||||||| ||||| | |||||||||||| ||||| | ||
ha00413   1701 GTTAGAGGGCTGGCCTGATTCTTATAAGTGTGACTACCCGGAAAGTTATA 1750
                L  E  G  W  P  D  S  Y  K  C  D  Y  P  E  S  Y  R

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
                 G  T  A  L  R  D  F  H  M  S  P  L  S  C  D  T  
msj04008  1493 GGGGAACTGCACTGAGGGACTTCCACATGTCTCCACTATCCTGTGATACT 1542
               | |||||   ||| | |||||| |||||||||  | |||||||  | |  
ha00413   1751 GAGGAACCCTACTAAAGGACTTTCACATGTCTGAATTATCCTGCAACATA 1800
                 G  T  L  L  K  D  F  H  M  S  E  L  S  C  N  I  

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
               V  L  L  T  V  T  I  G  A  T  M  L  V  L  A  V  T 
msj04008  1543 GTTCTGCTGACTGTCACCATCGGGGCCACTATGCTGGTGCTGGCTGTCAC 1592
                 ||||||||  ||||||||||  ||||| ||||||||| ||||||| ||
ha00413   1801 ACTCTGCTGATCGTCACCATCGTTGCCACCATGCTGGTGTTGGCTGTGAC 1850
               T  L  L  I  V  T  I  V  A  T  M  L  V  L  A  V  T 

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
                G  A  F  L  C  L  Y  F  D  L  P  W  Y  V  R  M  L
msj04008  1593 TGGGGCTTTCCTCTGTCTCTACTTTGACCTGCCCTGGTATGTGAGGATGC 1642
               || | | | ||||||   |||||| || |||||||||||| | |||||| 
ha00413   1851 TGTGACCTCCCTCTGCAGCTACTTGGATCTGCCCTGGTATCTCAGGATGG 1900
                V  T  S  L  C  S  Y  L  D  L  P  W  Y  L  R  M  V

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
                 C  Q  W  T  Q  T  R  H  R  A  R  H  I  P  L  E  
msj04008  1643 TGTGTCAGTGGACACAGACCAGGCACAGGGCCAGGCACATCCCCTTAGAG 1692
               |||| |||||||| |||||| ||| |||||||||| |||| |||||||| 
ha00413   1901 TGTGCCAGTGGACCCAGACCCGGCGCAGGGCCAGGAACATACCCTTAGAA 1950
                 C  Q  W  T  Q  T  R  R  R  A  R  N  I  P  L  E  

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
               E  L  Q  R  N  L  Q  F  H  A  F  V  S  Y  S  G  H 
msj04008  1693 GAACTCCAGAGAAACCTCCAGTTCCATGCTTTTGTCTCATACAGTGGGCA 1742
               |||||||| ||||| |||||||| ||||| ||| | ||||| ||||||||
ha00413   1951 GAACTCCAAAGAAATCTCCAGTTTCATGCATTTATTTCATATAGTGGGCA 2000
               E  L  Q  R  N  L  Q  F  H  A  F  I  S  Y  S  G  H 

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
                D  S  A  W  V  K  N  E  L  L  P  N  L  E  K  D  D
msj04008  1743 TGATTCTGCCTGGGTGAAGAACGAATTACTACCCAACCTAGAGAAAGATG 1792
                ||||||  |||||||||||| |||||| | || |||||||||||||| |
ha00413   2001 CGATTCTTTCTGGGTGAAGAATGAATTATTGCCAAACCTAGAGAAAGAAG 2050
                D  S  F  W  V  K  N  E  L  L  P  N  L  E  K  E  G

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
                 I  Q  I  C  L  H  E  R  N  F  V  P  G  K  S  I  
msj04008  1793 ACATCCAGATTTGCCTCCATGAGAGGAACTTTGTCCCTGGCAAGAGCATT 1842
                 || ||||||||||| |||||||| |||||||| |||||||||||||||
ha00413   2051 GTATGCAGATTTGCCTTCATGAGAGAAACTTTGTTCCTGGCAAGAGCATT 2100
                 M  Q  I  C  L  H  E  R  N  F  V  P  G  K  S  I  

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
               V  E  N  I  I  N  F  I  E  K  S  Y  K  S  I  F  V 
msj04008  1843 GTGGAGAACATCATCAATTTCATTGAGAAGAGTTACAAGTCCATCTTTGT 1892
               ||||| || |||||||  | ||||||||||||||||||||||||||||||
ha00413   2101 GTGGAAAATATCATCACCTGCATTGAGAAGAGTTACAAGTCCATCTTTGT 2150
               V  E  N  I  I  T  C  I  E  K  S  Y  K  S  I  F  V 

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
                L  S  P  H  F  I  Q  S  E  W  C  H  Y  E  L  Y  F
msj04008  1893 GCTGTCTCCCCACTTCATCCAGAGTGAGTGGTGTCATTATGAACTCTATT 1942
                 |||||||| ||||  |||||||||| ||||| |||||||||||||| |
ha00413   2151 TTTGTCTCCCAACTTTGTCCAGAGTGAATGGTGCCATTATGAACTCTACT 2200
                L  S  P  N  F  V  Q  S  E  W  C  H  Y  E  L  Y  F

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
                 A  H  H  N  L  F  H  E  G  S  D  N  L  I  L  I  
msj04008  1943 TTGCCCATCACAATCTCTTCCATGAAGGCTCTGATAACTTAATCCTCATC 1992
               ||||||||||||||||||| |||||||| ||| ||| ||||||||| |||
ha00413   2201 TTGCCCATCACAATCTCTTTCATGAAGGATCTAATAGCTTAATCCTGATC 2250
                 A  H  H  N  L  F  H  E  G  S  N  S  L  I  L  I  

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
               L  L  A  P  I  P  Q  Y  S  I  P  T  N  Y  H  K  L 
msj04008  1993 TTGCTGGCACCCATTCCCCAGTACTCCATCCCTACCAATTACCACAAGCT 2042
               ||||||| ||||||||| ||||||||||| |||| || ||| ||||||||
ha00413   2251 TTGCTGGAACCCATTCCGCAGTACTCCATTCCTAGCAGTTATCACAAGCT 2300
               L  L  E  P  I  P  Q  Y  S  I  P  S  S  Y  H  K  L 

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
                K  T  L  M  S  R  R  T  Y  L  E  W  P  T  E  K  N
msj04008  2043 CAAAACTCTCATGTCACGAAGGACCTATCTGGAATGGCCCACAGAGAAGA 2092
               ||||| ||||||| |  | ||||| ||| ||||||||||||  || ||||
ha00413   2301 CAAAAGTCTCATGGCCAGGAGGACTTATTTGGAATGGCCCAAGGAAAAGA 2350
                K  S  L  M  A  R  R  T  Y  L  E  W  P  K  E  K  S

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
                 K  H  G  L  F  W  A  N  L  R  A  S  I  N  V  K  
msj04008  2093 ACAAGCATGGACTTTTTTGGGCAAACCTAAGAGCATCCATTAATGTTAAG 2142
                ||| | ||| ||||||||||| ||| |||| ||| |||||||| |||||
ha00413   2351 GCAAACGTGGCCTTTTTTGGGCTAACTTAAGGGCAGCCATTAATATTAAG 2400
                 K  R  G  L  F  W  A  N  L  R  A  A  I  N  I  K  

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
               L  V  N  Q  A   K  E  R                           
msj04008  2143 CTGGTTAACCAGGCAGAAGGAACGTGTTACACACAGCAATAAGAATATCC 2192
               |||    | || ||| ||| ||    |||||||       || ||||| |
ha00413   2401 CTGACAGAGCAAGCA.AAGAAATAGATTACACATCAAGTGAAAAATATTC 2449
               L  T  E  Q  A   K  K  *                           

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
msj04008  2193 ACCTCAATGATGTTGCTGCTCTGGGGAGTTCTAATAAT.AGTACCATTCA 2241
                 |    |||| |||||||| | || ||||| || ||| | |    ||  
ha00413   2450 CTCCTGTTGATATTGCTGCTTTTGGAAGTTCCAACAATGACTTTATTTTG 2499

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
msj04008  2242 TATCAGCAAGAACCTAAAAATGGTTCTGACTTTACAATGTGGG....AAT 2287
                |||||||   |  |||| |   || ||| | ||  |||| ||    |||
ha00413   2500 CATCAGCATAGATGTAAACACAATTGTGAGTGTATGATGTAGGTAAAAAT 2549

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
msj04008  2288 TTGTGCTTTTTAGCCCAAGTTTACCGCTAGTGTTTTCTAATAAAAATTAG 2337
                | | | ||   | |  |||| |||  |  | | |  || ||||||||| 
ha00413   2550 ATATACCTTCGGGTCGCAGTTCACCATTTATATGTGGTATTAAAAATTAA 2599

          2601 ----+----*----+----*-- 2622
msj04008  2338 TGGGATACT............. 2346
               ||  ||  |             
ha00413   2600 TGAAATGATATAACTTTGATTT 2621